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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004733 ID=TCONS_00004733|Name=TCONS_00004733|organism=Clytia hemisphaerica|type=transcript|length=1359bp
atttttttcaatgttttaaaaatatttaaaagagaataaaaataattcaa
ccAATATTCGTAATTTCCGTATTGATTCGTTGAGATACTGATTTGACAaa
agacaaaattctttctctGTCTTTTTCAAATAATCTATGGCCACACTTCT
GCATGAATTTATCTGGATGCCAACGTATCCTCTgaactttcaaatatttc
attttatctTCAGTGAAACCATGGCAAAATAATTTCATCATACCATTTAN
taaatatttcattttatctTCGTCAGTGAAACCATGGCAAAATAATTTCA
TCATACCATTTAAGCACTGTTCTTCGTTCAATTCGCCTAAATCAAATCCA
GGGAAGTGTAACCAAGGAATCTGTTCAAATTTCAGCTCGTTCTTATTCTc
gttgtttttgaaaatcgaatcaCAAATCTTTTCATATTCTTCTCTTAAAC
GCAATAACTCAAAATTCGTTCTCAGTTCTTTCAAATTGTTTATGGGACCC
AGTTTCCTTTTCTTcgtactttcgctttcgttttctctCTTTCTCGATTT
AGTTTTCAAAGGAACAGCTTTAGATCGATGTTTCCGATTATGTTCGGATT
GCATTCGGTCACCCCATTCCTCGAACGTCTCGGTCTTCGATTTTCGAAAT
GTATCCTCATGCTCATCTTggaaaaacatttcatttccataacGATTATC
ATTCTCACTCATTTCAAAGAAAAGTCGCTCGTTCCAGTCCTTTTCTTTTa
attcactttcactttcgctttcaggTTCTATAAGATATTGGGATTgcgat
ttttgtaaaagctgcaTTATTTCGTCAAGTAAATCAACAGGTGTTTCACC
ATACTCGTTTCGCTGAGTCAGCAATTTATCCCCCATCTCGGGGAGCACGT
CAAATATGATATAGTACAAGAAGGGTCGATCAAAACTTTCGATGACGTAA
TTGAACGCGTAATGAAGAAATAAATTATCTTTCTTATCTAGAAAAGTCAA
ATCAGCGTGATGAGAAATTAAGAATTTAACAATGGCAAGTTCACCCGTGG
ATGAATATTTATGTAAGTAAGTCCAGCCACGGTCACCGAATGTTTCGTTA
ATTTCATCAATAAAGTAATCTATGGAACCACGACCAACGAACTTTTGGTA
ATACTTTTCCATTTTTAGCAATCGTCCATCTTGCAGGTACCGATCaaact
ttttgaatattttctcttCTTCTGTTTGACggtgttttctctttcgtttc
tttttcgatttggatttttttcgaGAAGAAGGATCATTCTTTCGTTTGGT
AGACCTTCTTTCGTCCTCACTTTCTGCCATTAAGTATGTTTATTTACTAC
TCCTAAAAC Run BLAST on NCBI transcript from alignment at sc0000048:59169..60527+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004733 ID=TCONS_00004733|Name=TCONS_00004733|organism=Clytia hemisphaerica|type=transcript|length=1359bp|location=Sequence derived from alignment at sc0000048:59169..60527+ (Clytia hemisphaerica)
atttttttcaatgttttaaaaatatttaaaagagaataaaaataattcaa
ccAATATTCGTAATTTCCGTATTGATTCGTTGAGATACTGATTTGACAaa
agacaaaattctttctctGTCTTTTTCAAATAATCTATGGCCACACTTCT
GCATGAATTTATCTGGATGCCAACGTATCCTCTgaactttcaaatatttc
attttatctTCAGTGAAACCATGGCAAAATAATTTCATCATACCATTTAN
taaatatttcattttatctTCGTCAGTGAAACCATGGCAAAATAATTTCA
TCATACCATTTAAGCACTGTTCTTCGTTCAATTCGCCTAAATCAAATCCA
GGGAAGTGTAACCAAGGAATCTGTTCAAATTTCAGCTCGTTCTTATTCTc
gttgtttttgaaaatcgaatcaCAAATCTTTTCATATTCTTCTCTTAAAC
GCAATAACTCAAAATTCGTTCTCAGTTCTTTCAAATTGTTTATGGGACCC
AGTTTCCTTTTCTTcgtactttcgctttcgttttctctCTTTCTCGATTT
AGTTTTCAAAGGAACAGCTTTAGATCGATGTTTCCGATTATGTTCGGATT
GCATTCGGTCACCCCATTCCTCGAACGTCTCGGTCTTCGATTTTCGAAAT
GTATCCTCATGCTCATCTTggaaaaacatttcatttccataacGATTATC
ATTCTCACTCATTTCAAAGAAAAGTCGCTCGTTCCAGTCCTTTTCTTTTa
attcactttcactttcgctttcaggTTCTATAAGATATTGGGATTgcgat
ttttgtaaaagctgcaTTATTTCGTCAAGTAAATCAACAGGTGTTTCACC
ATACTCGTTTCGCTGAGTCAGCAATTTATCCCCCATCTCGGGGAGCACGT
CAAATATGATATAGTACAAGAAGGGTCGATCAAAACTTTCGATGACGTAA
TTGAACGCGTAATGAAGAAATAAATTATCTTTCTTATCTAGAAAAGTCAA
ATCAGCGTGATGAGAAATTAAGAATTTAACAATGGCAAGTTCACCCGTGG
ATGAATATTTATGTAAGTAAGTCCAGCCACGGTCACCGAATGTTTCGTTA
ATTTCATCAATAAAGTAATCTATGGAACCACGACCAACGAACTTTTGGTA
ATACTTTTCCATTTTTAGCAATCGTCCATCTTGCAGGTACCGATCaaact
ttttgaatattttctcttCTTCTGTTTGACggtgttttctctttcgtttc
tttttcgatttggatttttttcgaGAAGAAGGATCATTCTTTCGTTTGGT
AGACCTTCTTTCGTCCTCACTTTCTGCCATTAAGTATGTTTATTTACTAC
TCCTAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004733-exon-sc0000048-1491911889:59169..60527 | TCONS_00004733-exon-sc0000048-1491911889:59169..60527 | Clytia hemisphaerica | exon |
| TCONS_00004733-exon-sc0000048-1510915933:59169..60527 | TCONS_00004733-exon-sc0000048-1510915933:59169..60527 | Clytia hemisphaerica | exon |
| TCONS_00004733-exon-sc0000048-1575043694:59169..60527 | TCONS_00004733-exon-sc0000048-1575043694:59169..60527 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048 | supercontig | sc0000048:59169..60527 + |
Blast
The following BLAST results are available for this feature:
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