TCONS_00004697 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004697
Unique NameTCONS_00004697
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004697 ID=TCONS_00004697|Name=TCONS_00004697|organism=Clytia hemisphaerica|type=transcript|length=1189bp
ctagaTTTAGtatactaaaataaaaagatgGCAGAAGAAAGTAGTAAAAT
TAAAGTCCATCCTATGACACAGAAACCAACACAACTgtgggataaaatca
aagtcaaaggagaaaataaaaaacagaagaaatTAAACGTTGAAGACTAT
GTCGCACTACCTAAAGAACAAAAACCGGGGCATGTCCGATTTGTTTTGGT
ATCAGACACTCACAGTCAAACGGACAATCTAGAAATGCCAGAAGGAGATA
TTTTAATACACGCTGGAGACTTCTCTAATGTTGGAAAACCAGgagaaatt
gataaatttaatgaatttcttgGTCGTATACAACCGAAATATAAACACCT
AATAGTCATTGCTGGAAACCACGAATTAACCTTTGATCCTTTTGGTGCAG
AATCGGCCGGTTATTTGCTACCAAAAGACTGCTTAGGTTTGGATCATAAA
gagatgaaaaagaaattaacaAATTGTACATTTATTGAAGACCAAGCTGT
TGAGGTCATGGGATTCAAAATCTATGGATCGCCCTGGCAACCAGAATTCG
GTGGATGGGCGTATAATTTGAAACGTGGTGCTGATTGTTTAGAAAAATGG
GATCTCATCCCTGATGATACAGATATACTTGTCACCCACGGACCGCCCCT
TGGCTATGGTGATCACTGTTCGAGTCAAATGAGGGCGGGATGCGCAGAAC
TTTTATCGACCATTCAGAATAGGGTAAAACCAATGATCCATGTTTTCGGA
CATATTCATGAAGCATATGGTATTTGGACGGACAGCACAACGACATATAT
CAATGCTTCAACATGTACTTTACGTTATAAGCCTTCCAACAAGCCCATCA
TAATGGATCTCAAACCTCCCGAGAAAAAGTGAACTCAGTTGTTTCAGCAC
TTACAAAAACGATTGTTGCCTTTTTGGACCGACCTGGAGGTCGTGGGCTG
GTGGTCCGTCCGTCCGTcagttcgtctgttaccagcttttctcgagctgt
actttatacttttttatgaaattttacacactgatgcaaagtgacaatac
ctaaaatgtgaagcagcccgattttcgaaaaacactttttttcggccaaa
aatgccggaaatatgccggaaaaatgtttttttttgcattttctcgagat
tttatctttagttttttctgattttttgctcaaagatgc
Run BLAST on NCBI

protein sequence of TCONS_00004697-protein

>TCONS_00004697-protein ID=TCONS_00004697-protein|Name=TCONS_00004697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MAEESSKIKVHPMTQKPTQLWDKIKVKGENKKQKKLNVEDYVALPKEQKP
GHVRFVLVSDTHSQTDNLEMPEGDILIHAGDFSNVGKPGEIDKFNEFLGR
IQPKYKHLIVIAGNHELTFDPFGAESAGYLLPKDCLGLDHKEMKKKLTNC
TFIEDQAVEVMGFKIYGSPWQPEFGGWAYNLKRGADCLEKWDLIPDDTDI
LVTHGPPLGYGDHCSSQMRAGCAELLSTIQNRVKPMIHVFGHIHEAYGIW
TDSTTTYINASTCTLRYKPSNKPIIMDLKPPEKK
Run BLAST on NCBI

transcript from alignment at sc0000047:562462..568966-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004697 ID=TCONS_00004697|Name=TCONS_00004697|organism=Clytia hemisphaerica|type=transcript|length=6505bp|location=Sequence derived from alignment at sc0000047:562462..568966- (Clytia hemisphaerica)
CTAGATTTAGTATACTAAAATAAAAAGATGGCAGAAGAAAGTAGTAAAAT
TAAAGTCCATCCTATGACACAGAAACCAACACAACTGTGGGATAAAATCA
AAGTCAAAGGAGAAAATAAAAAACAGAAGAAATTAAACGTTGAAGACTAT
GTCGCACTACCTAAAGAACAAAAACCGGGGCATGTCCGATTTGTTTTGGT
ATCAGACACTCACAGTCAAACGGACAATCTAGAAATGCCAGAAGGAGATA
TTTTAATACACGCTGGAGACTTCTCTAATGTTGGAAAACCAGGAGAAATT
GATAAATTTAATGAATTTCTTGGTCGTATACAACCGAAATATAAACACCT
AATAGTCATTGCTGGAAACCACGAATTAACCTTTGATCCTTTTGGTGCAG
AATCGGCCGGTTATTTGCTACCAAAAGACTGCTTAGGTTTGGATCATAAA
GAGATGAAAAAGAAATTAACAAATTGTACATTTATTGAAGACCAAGCTGT
TGAGGTCATGGGATTCAAAATCTATGGATCGCCCTGGTTAGTATAGTTTT
TGTAAACATCTAAAATTAGATTTGCCACCATTTTCTAATCTTTGGATTCA
AATATCCGATGTTTCCTTATATTCATCTCATGAATATGTAAAATGCTACG
TTTACAGTTCAAACATTTCACAAGATAGAAGCGTAAGGTAGTTTTTCTAG
GAATTTAGCTTGAGTTTTAGTTGTGAAAGAGATGACTATAACTTTAGTAT
TTAATACATCTTTTCGACCGTAGCCGCCAATTGCCGCGGGCATTATTTGT
CCGTTTTACTACCCTAAAGTCGTCCCAGTCCTTTTTCGCACCTAGACAAT
AGAAATAAGTGTAAACAAGAGCCGCAAAGATGCGGATAAATATTTCCTTT
ACAAAATGTTAAGAAAATAATTGATGTCCTCAAAAGATTTCAAAGTGCTT
TAAATCTCAGATAACATCAAGCAACACAAGTCCCTAAGAATTTCAAAATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TTCCATTTATGTTATTGCCAGTATTTACAGGATTATTCATAAGATGACTG
TAGGTTCAAAGCTACGGATCACGGAATATATCCAAGCTGAACCCGACTGA
AAACAACAATGCAGTAATCAAATTGGCTGGAACTTTAATTTTCGTTAGGT
GGACTTTAAATGTATTTTAGTATTATACTAGCGGTCACCCGGCGTCGCAC
CGCCAAGTAGAGTGTTGTTGAACACATCAAAAGACCAATTATATAATTAT
TATTTTAAGCGCTGATTTCCAGAAATATTATATAGCCAAAAAGGGCAAAT
ATTTAAAATGAAAGAATGACAAAAAGGAGAATATTTCACAGTAAGAAAAC
CAAAGAAAATTTTATATATTTTCAAAATGAGATGAAATATTTTGCATTAT
ACTTTCGTATATAAAATATTGTAAAAAATGTAAAAATTTAAAGTAACTTA
CTTTTGGAGTTTTTTGAAATAATGTACGTGCTAAAAAGTTAAAATCTTTC
AAAACAGGGAAACAATTTCATATTTTCCGACAGAATGCAAAAAAAAAAAA
ATCTCGTTTTTATATATGGGAAACATTTCATAATCTGAAAGAATTTCGAT
AGGAAAAAATTCACCTAACAGAAGCCATTTTATGATTTCCAAAAGCATGC
TGCAAGAGCAAAAAATGTCACATACTGTACTTGGAAACAATCAAAATTTC
CAAAAAAATGTCAGAGTAGAAAATAAATTGTCATGCCAAGAAATCACTTG
AGTTTTCTTCATTTTTAAAATGCATGTGGAAGAAAATGTCAAGTTCACGA
CAAAAGTTTTCCACGTTTTGAAAGTACATACTGTCAACTGCTTTAACTTG
GGACGATTGGTCAAAACATGGGACTGTTTGATATCTGGTCTGTGTGACGT
CAAACACTCCATCGTTTTGCCACTAATTTGTTCATCTTCGATCTAGACAC
TGTGTGTATTCCACTACGGATTTTCATATTTCGATTTAAAAGCCTACGGA
GTGTGAAAGAGAAATCGTGTTTTTTTAATATGCCGTTCATTAACTCAAAT
CAAATGACTTTGGAGGTTCGGTGAAATGGTGGCCGAATTGCCGTCCCATG
TTTTGTCAGATAGTCCCAAGTTGGAGCAGTTGACAGTAAGAAAATCTCCA
AATTCACGACAAAAGTTTCCACGTTTAAGACACACGTTGCAAAATATCTC
TAAATTCACAACTAAAGTTTTCCACGTTTTAAAATGCACGCGGGGAAGAA
AATCTCCAAGTTCAAGAAAAATTTTAATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTT
TCAAATTATTTACATCCATATTCAATGCAATAAACCTTTTAAGAAGTATA
ACATAACATTCTTCATATTGGGGCCGTGGTGTTCCGGATCCGGCTATCAG
CTTTGAAAATTTGAAATTTATAACCGCAATGAGTTTTCACTAACTGTCAT
TAACCAGCAGTCAATTCATTGTTGTAGATAAAAACACCAAGGGAAATTCA
ATCATTAACCAGTCAATTTAGCTCCATGCTTAAATTTTTAGCTAAAATCA
GTTCATCAACCATTCCCATTGTTGCATTGTCGGCATTGCATTCGTTGGGT
GCAAAATTTTTTCATATTGCAAGTATGTAATTTTTCAGGTATAACATGGT
CAGATTTATTCACAGTCACTTGCCTTCGTACGATTTATGTAAATATACAA
ACAAAATTGAAGTTAGTTTGTTGTGAAAGTTGATAAAATGTCCTGTTTTT
CCAAGACCAAGAGATTAGATTGTATATCTCTCATTCCAGCTCATTCCAAA
CCAACAGAATGTAAACGAAACATCAAATCCAGAAAGGAATATTAAGAAAA
GTTCACTATCGACCATTCCTTGTGACAATCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCTCAGTTCGTATATTAAGAGGATAAATAGGATTTCTTGTT
CTAAGGCCACCTGGTGCTGTAAGTCTTACTGGCAGGTAGTTACGTAAATA
CGAAGGGGCTAATTGTTAATAATTCCATAGAATAATGTCATTCTTCTAGC
AAAGCGCCTGNGTAGCGAAAGAGCAAAAGTTGTTGTCTATTTTCTGCCAT
CTTTGTTTTGACAGTTAGAAACAAAGCAGTATGGTCCGATCAACAATACG
CTTCTGAAACAGTCGACGTTACCCGATCGACAAGGAGAATAGAGCGCCGT
ACGGATATTTACCACAGACGTTTTTTCTTTATTGAAACAAAGACACGTGT
ACACTACGAACATATATTACAAAACANATATTGAATAGATTCAAGCTTCT
GCACAAAGGTAGCATTTCCTGGGTGGTCATATACGATATCACCATAATCA
AGATGAGGCCTAATGAAAGATTTATAAATGATTAGTAGAGATCTCCTAGG
CACATGCTTGCGAAGTCGGTTAATAAGACCAATTCCTTTATTGGCCTTTT
GTTTCTTCTCATCTAGATGACGATTAAAAGAAAGTTTTGAATCTAAGATT
AAACCAAGATGTTTGTGGTACTCACTGGTCGCGATATTAGAGTTATTAAA
GGATATTACTGGAGCATTAGGAGGAGTGAGTCTACAGGTAAAATAGACTT
CAACAGCTTGCTTAGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGATGA
AAAATAATGCCTAGGATCTGAAGTTTGTCGAACAAAGATTGTCTTGCATG
GGAATATATAGAGCAGTGCAGAAGAAAGTGTTGAGTGTTTTGAATAGAGT
TAGTTCGGCAACCACAGAAAGGGTCTAAAGTGNCAGGTAAAATAGACTTC
AACAGCTTGCTTAGATGGGTCAGGGTTAAAAGACATCTTCCATTGATGAG
CCCAATCAGTTATCCTGGAGAGATCCACAGACGTTTCTCGAAGAAATGAC
GTCTTCCGCCTCGAAAAAAGAACAACCTACTGTTTTTACCGCCGGAGCTT
GATTTAAAAAGAGACTCATGTAACAACTCACGAAATTGACCAAAACCGGC
GTTAGACTTGAAGAAGAAGGAGGAGAAGAAGAAGGAGAAAAATTACTGTT
TTAACAAATATTTCCTATATAGATAGGAAATATTTAAAAAAGGATTGAAT
CGAGTTTAAGTGGTGAATTAAATAATGAAGTGGCATGTGCCTGACCGCGC
GACTACTGTATTGAAATACTTAATGTTTTTCGCAGACTTCGTTTGTCTAT
GGAGCTTCATACCTTATTTTGGTTCTTAGAAGGTAGAGTCAGTTGTGTCG
TTAGATTTCTGTCACTAATTTCCGGTCACTTTTTGGACCTACCTAGAGGT
CCTATAAATTAACCTGTGTCCGTTCGTTCGTTCGTCCATCCGTTCTGTTC
CGTCTGTTACCAAATTTTCTCGGGATTGAATCATAGGAATTCTTTGATTT
TTGGTACAAAGGTGCAAAATAGTGGTGGCCAAAATGTGAAGCAGCCTGAT
TTTTAAAGAAAAATAATTTGGGGCCAATTTGGGCCCAAAAATGCTCAAAT
TAGGGATTTTAAACTTTGTGAAAAGTTCATTCATTAGATTTTTCTTATTT
TTTGAGCCGATTTGGACCCAAAAATGCCAATTGGACTATGTGAAAAATCT
GTTCATTAGTTTTTTTTGTACAAACACTTGCTACTCATTAATGAATATAT
AAACAATAGACCTAGTGGCAAACGCCCGGGCTCTTTTGGGTGCCTCCGNG
TACAAACACTTGCTACTCATTAATGAATATATAACCAATAGACCTAGTGC
CCACGTCCGGGCTCTTTTGGGTGCCTCCGTATAAAACATTACCTCATGAA
TATCTTGATATTTATTTTCTGATTTTCATAAAGGCAACCAGAATTCGGTG
GATGGGCGTATAATTTGAAACGTGGTGCTGATTGTTTAGAAAAATGGGAT
CTCATCCCTGATGATACAGATATACTTGTCACCCACGGACCGCCCCTTGG
CTATGGTGATCACTGTTCGAGTCAAATGAGGGCGGGATGCGCAGAACTTT
TATCGACCATTCAGAATAGGGTAAAACCAATGATCCATGTTTTCGGACAT
ATTCATGAAGGTAATACCTGTTCCTAATCCCTTTTCGAAACCACACATTT
TCTTTTACAAGAACATCGAACATTTTTTAAGTCTTGACTTTTTGAGCTCA
TGTTCGTGTTCTCATTTTCAACGTTTTTGTATTTTTGTCCATTTTCCTTA
AAGAGATCGGGCTTCTTAAAGGAATTATACGGTGTTATATACACCCGACT
CGTCTGAAACTGATGTCAGCAAAATTTTAATAAAAGAGTCCTTTCAAATT
TGTAAATAAAAGGAAGAAAAAAATCTTGCTCCACATTTTTTCTTTATTCA
TTACAAAAGATTCTATTTATTTCAATCTGCTGAATCAACATACATTATAA
CTATGTAAAATGTCAATGGCTTTAAGAGTCTGCAAAGCCTTTAAAAATGT
TCTTAACTAGTCTGAATCGCAGACCTCTAAAAACCGCAGATAGTATAAGA
AGCACGAATTCGTTAGATGATGCAAGCAGTCTAGTTCTTAACTTGTTCTT
AATATTTTGGCTTCTAAACATATTTTTTGTATAATTTCTTCTTATAAAAA
AAATCGTGTAGAGCTAAACTTTCCCAGAACAACTAAAAACGATTATGTAG
AGAGAGCACTGTAAGGGTAGGAGAGCTCTTCATAATCGATTTTGAATCTT
ACCAGTCTTATACTAATCCTCATGCAGAAAGTATTAAACTGATTATTGTT
AACACATAAATAACGTAATTAGGACTGATAAGATAGACGTAGGCTGTAGT
TGTAATGTATTTTCATATTTTTCTTGTAGCATATGGTATTTGGACGGACA
GCACAACGACATATATCAATGCTTCAACATGTACTTTACGTTATAAGCCT
TCCAACAAGCCCATCATAATGGATCTCAAACCTCCCGAGAAAAAGTGAAC
TCAGTTGTTTCAGCACTTACAAAAACGATTGTTGCCTTTTTGGACCGACC
TGGAGGTCGTGGGCTGGTGGTCCGTCCGTCCGTCAGTTCGTCTGTTACCA
GCTTTTCTCGAGCTGTACTTTATACTTTTTTATGAAATTTTACACACTGA
TGCAAAGTGACAATACCTAAAATGTGAAGCAGCCCGATTTTCGAAAAACA
CTTTTTTTCGGCCAAAAATGCCGGAAATATGCCGGAAAAATGTTTTTTTT
TGCATTTTCTCGAGATTTTATCTTTAGTTTTTTCTGATTTTTTGCTCAAA
GATGC

Coding sequence (CDS) from alignment at sc0000047:562462..568966-

>TCONS_00004697 ID=TCONS_00004697|Name=TCONS_00004697|organism=Clytia hemisphaerica|type=CDS|length=2565bp|location=Sequence derived from alignment at sc0000047:562462..568966- (Clytia hemisphaerica)
CATATGGTATTTGGACGGACAGCACAACGACATATATCAATGCTTCAACA
TGTACTTTACGTTATAAGCCTTCCAACAAGCCCATCATAATGGATCTCAA
ACCTCCCGAGAAAAAGTGAGCAACCAGAATTCGGTGGATGGGCGTATAAT
TTGAAACGTGGTGCTGATTGTTTAGAAAAATGGGATCTCATCCCTGATGA
TACAGATATACTTGTCACCCACGGACCGCCCCTTGGCTATGGTGATCACT
GTTCGAGTCAAATGAGGGCGGGATGCGCAGAACTTTTATCGACCATTCAG
AATAGGGTAAAACCAATGATCCATGTTTTCGGACATATTCATGAAGATGG
CAGAAGAAAGTAGTAAAATTAAAGTCCATCCTATGACACAGAAACCAACA
CAACTGTGGGATAAAATCAAAGTCAAAGGAGAAAATAAAAAACAGAAGAA
ATTAAACGTTGAAGACTATGTCGCACTACCTAAAGAACAAAAACCGGGGC
ATGTCCGATTTGTTTTGGTATCAGACACTCACAGTCAAACGGACAATCTA
GAAATGCCAGAAGGAGATATTTTAATACACGCTGGAGACTTCTCTAATGT
TGGAAAACCAGGAGAAATTGATAAATTTAATGAATTTCTTGGTCGTATAC
AACCGAAATATAAACACCTAATAGTCATTGCTGGAAACCACGAATTAACC
TTTGATCCTTTTGGTGCAGAATCGGCCGGTTATTTGCTACCAAAAGACTG
CTTAGGTTTGGATCATAAAGAGATGAAAAAGAAATTAACAAATTGTACAT
TTATTGAAGACCAAGCTGTTGAGGTCATGGGATTCAAAATCTATGGATCG
CCCTGCATATGGTATTTGGACGGACAGCACAACGACATATATCAATGCTT
CAACATGTACTTTACGTTATAAGCCTTCCAACAAGCCCATCATAATGGAT
CTCAAACCTCCCGAGAAAAAGTGAGCAACCAGAATTCGGTGGATGGGCGT
ATAATTTGAAACGTGGTGCTGATTGTTTAGAAAAATGGGATCTCATCCCT
GATGATACAGATATACTTGTCACCCACGGACCGCCCCTTGGCTATGGTGA
TCACTGTTCGAGTCAAATGAGGGCGGGATGCGCAGAACTTTTATCGACCA
TTCAGAATAGGGTAAAACCAATGATCCATGTTTTCGGACATATTCATGAA
GATGGCAGAAGAAAGTAGTAAAATTAAAGTCCATCCTATGACACAGAAAC
CAACACAACTGTGGGATAAAATCAAAGTCAAAGGAGAAAATAAAAAACAG
AAGAAATTAAACGTTGAAGACTATGTCGCACTACCTAAAGAACAAAAACC
GGGGCATGTCCGATTTGTTTTGGTATCAGACACTCACAGTCAAACGGACA
ATCTAGAAATGCCAGAAGGAGATATTTTAATACACGCTGGAGACTTCTCT
AATGTTGGAAAACCAGGAGAAATTGATAAATTTAATGAATTTCTTGGTCG
TATACAACCGAAATATAAACACCTAATAGTCATTGCTGGAAACCACGAAT
TAACCTTTGATCCTTTTGGTGCAGAATCGGCCGGTTATTTGCTACCAAAA
GACTGCTTAGGTTTGGATCATAAAGAGATGAAAAAGAAATTAACAAATTG
TACATTTATTGAAGACCAAGCTGTTGAGGTCATGGGATTCAAAATCTATG
GATCGCCCTGCATATGGTATTTGGACGGACAGCACAACGACATATATCAA
TGCTTCAACATGTACTTTACGTTATAAGCCTTCCAACAAGCCCATCATAA
TGGATCTCAAACCTCCCGAGAAAAAGTGAGCAACCAGAATTCGGTGGATG
GGCGTATAATTTGAAACGTGGTGCTGATTGTTTAGAAAAATGGGATCTCA
TCCCTGATGATACAGATATACTTGTCACCCACGGACCGCCCCTTGGCTAT
GGTGATCACTGTTCGAGTCAAATGAGGGCGGGATGCGCAGAACTTTTATC
GACCATTCAGAATAGGGTAAAACCAATGATCCATGTTTTCGGACATATTC
ATGAAGATGGCAGAAGAAAGTAGTAAAATTAAAGTCCATCCTATGACACA
GAAACCAACACAACTGTGGGATAAAATCAAAGTCAAAGGAGAAAATAAAA
AACAGAAGAAATTAAACGTTGAAGACTATGTCGCACTACCTAAAGAACAA
AAACCGGGGCATGTCCGATTTGTTTTGGTATCAGACACTCACAGTCAAAC
GGACAATCTAGAAATGCCAGAAGGAGATATTTTAATACACGCTGGAGACT
TCTCTAATGTTGGAAAACCAGGAGAAATTGATAAATTTAATGAATTTCTT
GGTCGTATACAACCGAAATATAAACACCTAATAGTCATTGCTGGAAACCA
CGAATTAACCTTTGATCCTTTTGGTGCAGAATCGGCCGGTTATTTGCTAC
CAAAAGACTGCTTAGGTTTGGATCATAAAGAGATGAAAAAGAAATTAACA
AATTGTACATTTATTGAAGACCAAGCTGTTGAGGTCATGGGATTCAAAAT
CTATGGATCGCCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002647XLOC_002647Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004697-proteinTCONS_00004697-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004697-exon-sc0000047-1575043694:568431..568966TCONS_00004697-exon-sc0000047-1575043694:568431..568966Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1575043694:563657..563883TCONS_00004697-exon-sc0000047-1575043694:563657..563883Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1575043694:562462..562887TCONS_00004697-exon-sc0000047-1575043694:562462..562887Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1510915933:568431..568966TCONS_00004697-exon-sc0000047-1510915933:568431..568966Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1510915933:563657..563883TCONS_00004697-exon-sc0000047-1510915933:563657..563883Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1510915933:562462..562887TCONS_00004697-exon-sc0000047-1510915933:562462..562887Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1491911889:568431..568966TCONS_00004697-exon-sc0000047-1491911889:568431..568966Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1491911889:563657..563883TCONS_00004697-exon-sc0000047-1491911889:563657..563883Clytia hemisphaericaexon
TCONS_00004697-exon-sc0000047-1491911889:562462..562887TCONS_00004697-exon-sc0000047-1491911889:562462..562887Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:562462..568966 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.56142	5.36597	7.54529	6.61803	8.35203	7.2913	5.95752	6.10023	5.82675	6.8395	9.97621	5.37838	5.80248	6.20096	4.74857	4.19147	9.40462	8.18939	3.42501	4.59078	12.9157	13.2143	5.27155	7.1323	20.4134	22.5131	8.83589	7.7366	21.3764	13.7618
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
IPR004843Calcineurin-like_PHP_ApaH
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
[Close]
BLAST of TCONS_00004697 vs. Swiss-Prot (Human)
Match: MPPD1 (Metallophosphoesterase domain-containing protein 1 OS=Homo sapiens GN=MPPED1 PE=2 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 6.249e-90
Identity = 139/287 (48.43%), Postives = 185/287 (64.46%), Query Frame = 1 
Query:   49 IKVHPMTQKPTQLWDKIKVKGENKKQKKLNVEDYVALPKEQKPGHVRFVLVSDTHSQTDNLEMPEGDILIHAGDFSNVGKPGEIDKFNEFLGRIQPKYKHLIVIAGNHELTFDPFGAESAGYLLPKDCLGL---------DHKEMKKKLTNCTFIEDQAVEVMGFKIYGSPWQPEFGGWAYNLKRGADCLEKWDLIPDDTDILVTHGPPLGYGDHCSSQM-RAGCAELLSTIQNRVKPMIHVFGHIHEAYGIWTDSTTTYINASTCTLRYKPSNKPIIMDLKPPEKK 879
            I+V   +  PTQ +    +     +   + + D V     + PG+ RFV VSDTHS+TD ++MP GD+LIHAGDF+ +G P E+ KFNE+LG +  +YK  IVIAGNHELTFD    E    L+ +D             +++ ++  LTNC +++D  V V GF+IYGSPWQP F GW +NL RG   LEKW+LIP+  DIL+THGPPLG+ D    +M R GC ELL+T+Q RV+P +HVFGHIHE YG+  D TTTY+NAS CT+ Y+P N PI++DL  P   
Sbjct:   45 IEVDEYSSNPTQAFTFYNINQGRFQPPHVQMVDPVPHDAPKPPGYTRFVCVSDTHSRTDPIQMPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPYEYK--IVIAGNHELTFD---QEFMADLIKQDFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFRIYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCVELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTPRNS 326
The following BLAST results are available for this feature:
BLAST of TCONS_00004697 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPPD16.249e-9048.43Metallophosphoesterase domain-containing protein 1... [more]
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