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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004687 ID=TCONS_00004687|Name=TCONS_00004687|organism=Clytia hemisphaerica|type=transcript|length=992bp
CTTTTGGTTGTATAATTATTTCTTCGAGTACACAGTTAAAATACATGTCT
ATATACAAAAATATGTTGTTTTGAATATGATATATAATAATTAATAATCA
ATTAATAATAagagtttttaaatattttctttcataaaTGCCATCTGTAA
AACagattctttaaaaatatagatCCATCTCCGGGATAAAGGTTGACTAA
CATTGATGATAAATTGGAGCAGAATGACGGATGATAAGGATAAAAAGCTT
TTTacaaaatacagttgacgctctctacttcaaggggaattggattttca
tcgaataagagagcttatcgaataagggagcgtcgtttctTGTTGACaag
gactttaaatttcatcgaataagggaaccTGTAAACGTCGAATTATAGAG
CGGCGACTGTACAAAAAGACCTGAATCAAttttttcaagctaaaatctGT
CTATATATTTTGGAATAGACTTTTTAAACCTCTGTGTTTTTCAATGAATT
GTACACACTTTCACACGATCGATTCACATTGCAATATCAATCTTTCTTTT
TAGAACTGTATCAAATTGTCTTCACTACTCGGTTCTGCTGGTGGAGCTTC
GTATGTCAAATTATTCGAAAACGGATTACTGCTTCCCGGATTACTGCTTC
CCCGATTTCGGTTTCTTCGGGGTGACGGTTGAGGAGACGGGATAGGTGAT
GGGGTCGGGGAAATTTGTGTCGTTGAGATCTGTGTTAAGTCTTCCGTAGA
TTTTNatcagaattaaacgatttttgtttattttgaaagaatgatggtta
tacttaaaaatgagcatgtttttgctggtttgagacagattcaaaataac
atatttgcgttcaaaggaaatattttaacaccaaaatttgataaaaattg
catatagctcactctagctccttggatattgaaaacaagttatgaaaacg
gggtatagaaaaccttctacacctaatgccgttcagaaaatg Run BLAST on NCBI transcript from alignment at sc0000047:409443..410434- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004687 ID=TCONS_00004687|Name=TCONS_00004687|organism=Clytia hemisphaerica|type=transcript|length=992bp|location=Sequence derived from alignment at sc0000047:409443..410434- (Clytia hemisphaerica)
CTTTTGGTTGTATAATTATTTCTTCGAGTACACAGTTAAAATACATGTCT
ATATACAAAAATATGTTGTTTTGAATATGATATATAATAATTAATAATCA
ATTAATAATAAGAGTTTTTAAATATTTTCTTTCATAAATGCCATCTGTAA
AACAGATTCTTTAAAAATATAGATCCATCTCCGGGATAAAGGTTGACTAA
CATTGATGATAAATTGGAGCAGAATGACGGATGATAAGGATAAAAAGCTT
TTTACAAAATACAGTTGACGCTCTCTACTTCAAGGGGAATTGGATTTTCA
TCGAATAAGAGAGCTTATCGAATAAGGGAGCGTCGTTTCTTGTTGACAAG
GACTTTAAATTTCATCGAATAAGGGAACCTGTAAACGTCGAATTATAGAG
CGGCGACTGTACAAAAAGACCTGAATCAATTTTTTCAAGCTAAAATCTGT
CTATATATTTTGGAATAGACTTTTTAAACCTCTGTGTTTTTCAATGAATT
GTACACACTTTCACACGATCGATTCACATTGCAATATCAATCTTTCTTTT
TAGAACTGTATCAAATTGTCTTCACTACTCGGTTCTGCTGGTGGAGCTTC
GTATGTCAAATTATTCGAAAACGGATTACTGCTTCCCGGATTACTGCTTC
CCCGATTTCGGTTTCTTCGGGGTGACGGTTGAGGAGACGGGATAGGTGAT
GGGGTCGGGGAAATTTGTGTCGTTGAGATCTGTGTTAAGTCTTCCGTAGA
TTTTNATCAGAATTAAACGATTTTTGTTTATTTTGAAAGAATGATGGTTA
TACTTAAAAATGAGCATGTTTTTGCTGGTTTGAGACAGATTCAAAATAAC
ATATTTGCGTTCAAAGGAAATATTTTAACACCAAAATTTGATAAAAATTG
CATATAGCTCACTCTAGCTCCTTGGATATTGAAAACAAGTTATGAAAACG
GGGTATAGAAAACCTTCTACACCTAATGCCGTTCAGAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004687-exon-sc0000047-1575043694:409443..410434 | TCONS_00004687-exon-sc0000047-1575043694:409443..410434 | Clytia hemisphaerica | exon |
| TCONS_00004687-exon-sc0000047-1510915933:409443..410434 | TCONS_00004687-exon-sc0000047-1510915933:409443..410434 | Clytia hemisphaerica | exon |
| TCONS_00004687-exon-sc0000047-1491911889:409443..410434 | TCONS_00004687-exon-sc0000047-1491911889:409443..410434 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:409443..410434 - |
Blast
The following BLAST results are available for this feature:
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