TCONS_00004532 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004532
Unique NameTCONS_00004532
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1530

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004532 ID=TCONS_00004532|Name=TCONS_00004532|organism=Clytia hemisphaerica|type=transcript|length=1530bp
ccaaaaatcgtcaaaaaatcACGAAGCTGTTCCagtcaaaaactgaaaaa
cctTGCTAGACAGTGCTAGAAGGTATTGTGTAATATGAATTatcaaaatt
tctaaataacAATCATGAGGGATATAAAAGAATGGTCATTGCATAATGGG
TGTACCTGTTAGCACACTTGTTTACACCTCCCAAAATAACAATAACAACC
GGCGTGAACACATCAACAATAGTTGTGTAACTGAAACACACAGTAGATTG
ATACAAGTCATGCCAGCTGATGATATTAGACGGaaaGATGGGGAACTTTT
AAAGTACAAGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGATTGG
AAAGATCTTATTTACATTATTATGAAACAAAACACAGTCACCAACCAGTA
GCCACCATTACACGTGGAGAAATCACACAGGTCAAACAAAGTACTGCATA
CCCTGGACGAAACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCATCT
GGTATTGCCAAGCTAGTTCACCGGGAGAAATGGTATCATGGATGCAAGCC
TTGTCTACTGTTCCTCTTATGGTCAACCCAGCCCAGTATCCAATGATTCC
GGCAGATCAAGCACCTCAAATGCCACCTGCCCCTTTCCCTCCCACACATG
CGTATCCAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGTACAGG
GAGTTGATGAACGATGCACACCACACTGCTTATCATTCCAACACACCACA
CGATTGCATACACGACAGTCCGCCACCACCCTACACTGTCACCCCAATTA
CACCTCAACCACCCCACAATCCTAATTATTAAGAGTATGCAGAATGATTT
CTAGTTCAGATGGATATATTCACGTGTTTGATGCGAATGAATGGAACGAG
ATGTTGGTGTCGATATGCAAATACCAAGTTCCAGCAAGCCTTCTAAGGct
tatttttccgttaaatcaGGTTAAATATGTACGATGGAATGGCGGGTCAC
ATTGTTTCGGGGATAAATAAatctaaatatttattttttgtactTTAAGT
GGATTTGTTTTTACGAGACgagaatttaaaaatttcgcgtggatttattt
tcgcgaatcaagggtcttcaaaaatttcgcatggattaaatttcgcgaat
taggCCTTCTTTATTTGATTTCGCGACTACCACCATGTAAATCGAACAAT
TTTAGAAAAGAGATGAAGGCAGACAAAGTCactcaaaagctttcaaaaaa
accACAAGGAAGGTACTCTTAGTAGTCCAGGGAAAGTGTGCATCAATTGT
GCGTTTTTGATtagaaaacatgaaatttggtacagtggtaccttaggggg
taagaaacattttaagcctctgacccacttccggaacacctgtttgtgta
ttttacagaccagaatgcctcCCAGGCATTTCATGATATGTATCtcaaaa
tggactgggtccgtGAAATAAGCCATaggagtaatttacagaccagaacg
gcTCCCGGgcatacaaaaaatatttttatc
Run BLAST on NCBI

protein sequence of TCONS_00004532-protein

>TCONS_00004532-protein ID=TCONS_00004532-protein|Name=TCONS_00004532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MGVPVSTLVYTSQNNNNNRREHINNSCVTETHSRLIQVMPADDIRRKDGE
LLKYKNVFSGWGKRYFRLERSYLHYYETKHSHQPVATITRGEITQVKQST
AYPGRNNVFEIVQKSGVIWYCQASSPGEMVSWMQALSTVPLMVNPAQYPM
IPADQAPQMPPAPFPPTHAYPNNAQAPPRYDSPYRELMNDAHHTAYHSNT
PHDCIHDSPPPPYTVTPITPQPPHNPNY
Run BLAST on NCBI

transcript from alignment at sc0000045:791746..811452+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004532 ID=TCONS_00004532|Name=TCONS_00004532|organism=Clytia hemisphaerica|type=transcript|length=19707bp|location=Sequence derived from alignment at sc0000045:791746..811452+ (Clytia hemisphaerica)
ccaaaaatcgtcaaaaaatcACGAAGCTGTTCCagtcaaaaactgaaaaa
cctTGCTAGACAGTGCTAGAAGGTATTGTGTAATATGAATTGTAAGTATA
GGTAAATTTTAGAGGCCTTTTGAGACTCAAGGATTGATTTGGAATTGCTG
TTAACTCTTTTCTACCACCATGTAAACACATATTCTTGTGTTGTTAGACT
AGCCGTAttgtaccgtagagtcgtttaatatcgacATATACGTCTTGCAA
TCTCGACATAGCTGTAGGCTGGTCTTCGAAATAAAAAATCAaacataaac
aaatacataccaaagttatcaatcaatcactaaattgttctctctctcta
tccacgtcacagattgttaatataatatgagaaatgtgaactgctgttat
tacttatatttgaaaagaacactttaacgatgtagtaatcactaaaaaaa
ctatttagcatgctttcaacgaagatgcccaaatcacaacaacattttgc
atgcgaggaattttttagtagacctttttaccgtgaaccgaaaataatta
aaagaacccggacgaccctgcctatgccccggacagtccggggcaaatgt
ctggggtctgaaaaagataactttttccccggacctatgtccggggctcc
aatttttgcgccataaatttaccccggacgtatatcgCCGAGCACACAAA
Gtgagagattttttttataaactaggcaaggttaataaattaattaaaaa
taaaaaaactaactttactTACCTTTCTCTGTCTGATCAGGATCCATNNN
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NNNNNNNNNNNNNNNNNNNNNNNTGCTGGTTATTACattcatattctgaa
taataaaattgatattaaATGGATTTGGCTTGAAAGTGGACATGGTAAAG
GTATCCCAGATGGCATTGGGGCAACATTAAAGAAAGCTCTTAAGGACATC
TTATCATTCAATCCAGACCAACCAGTCTTCACCGTTCACGATCTTCTTAT
TCTGTGTAACCTTCAAGAGTCTGTTCCCTCTAATGtttgtcctttccgca
acatTATTTGAGaactaatttattttatttaggaATACATAAAAAGTCAT
ACTTATgatttttaagcaatttaaaaGTGTAAAATTGNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtat
agcaaaactgcttcgctcataaattcgcttcgcaaaaatctttttcatca
aCAACAACGTTTTCATCGTCATCATTTTATCATCTACTAAGTTCTAGCTA
GTTCTAATTCAGGGGTGTTCCAAAAGTTAAAACTATGACAATGTGGCAAT
CCGTTCAGCTGACCAAAATGacacaaaattgacaaaatggcctgtcaaga
ctttttaaatatctttttccAGACGTAAATTACTTATTAAtcacgaccca
cggcatggcccgaacatgttcgggcctcttgattaatactttttagaAAT
GGCCCGCGCGGGCCCGCGCAGTTTTGGACCATGTTcaggccagattttcg
aaaactagcTACGATCGAGCGTGTAATTTCAAGAcacaatatttatattt
taaattccttattaaaacaaattattaaaaatcttcatctttattcaaat
atatattgttcaaatataaaaattaatcatctattttccaattaagttag
gaaaattattattaaaaagaatgatttgaatcttacatgatatggtcttc
tttttattctttatcccgttcctttttctcgtggtcttctcctattcaaa
gcagaatttttctggatcgttttttgtactgttatacaactttgtgaatc
aaactggtatttggaactttgaatttgtctaatgaaaatatttaacaatg
gatgatgataaaccaggaaaggtaaataaaattaaattgtaaatacatgg
cccgaacatggtccgaaaaaatgttcgggccgattcaataatactttttt
gtggcccgagcatggtccgaacaggcccgaacatgttcaggccatgccgt
gggtcgttaTTAATCGAACAGAAcgattaccgaactaatcgaactttgtc
gaacttaatcgaacgacaaaatttcaattaaattctttaatcaaactttt
cagAAGTccctaaaattgtgagtattcgattaagttcgacaaaacatatt
aagttcgacaaagttcgacaacgagaaaggttcgacaaattcgacaaaaa
actccgtTCGAAAAAGTTCCACAACAagaaatgttcgacaaattcgacaa
aaaactccgcAGACAAGGGCTGCATTCCTCAGTTCAGACCTGcggctgca
aaatccttgacgtggtcttgcaaaattctgcAGATCTCGACTTGCGAGCG
CTGCAACCGCACCTTTTGCTTGGGCTTTACTcatttttgctcgaaaaaaa
gattacgtcataaaaatgtagcgcgcgcttgaaatgttccatttttcttt
ttttcttttgacaaaTATCGTgcaagctttgctcgaaaaagtgcgatcga
attACGCGCAAGTGGAGCGGCCTTCAGTTACGcgggttttctcaaatttt
tgtttgattaaacttgaaaaagttcgattaagttcgattagttcgatttt
aagttcgattaatgtaatcaaactaatcgaactatcgaggtctctttaaa
aaagttcaaactttatattttgagaaatttgtgagtattcaaTTAAAGTT
CGACAACCGAACTTAGTCAAACATTAATCGGCCAACAAAGTTCAATTAAG
TTCGAANaaatttgtgagtattcgattaaagttcgacaaccGAAATTAGT
CAAACATTAATCAGCCATCAgccaacaaagttcgattaagttcgacaaag
ttcgattaaaaataccgttcgattgattcgattataAGTCTTGCTTTTTG
TTGGGGGGCCACTCACATTATCAATTTTTCCCATCATGGGGTCCGGGTGG
GTGGGTTAGATTGAGTGATGCTAAGAAAATCTACTAGAGATATCGGTTTT
CGAGGCTCAAGAGAATTTTCAGAAAACTATAACTTTAGGGATcctcgaca
aaaaactttcgaattttttatcggcattgggccgataagggggtgggggg
gtccaactacataccgataaaaaaacaagtattgggacgaaaatcttttc
agccaatttcttgctgatttcgtccacaaactcaactgaaagcatacaat
ttcacttgctttcaccttcGCGCACAAAATTTGcaactttaaaaatacaa
ttttgaattagctttgataaaaaaactcttttttcattggctagCGTGCT
GCCATTTCCTTCGAAATGTTGCGACTTCATCGCGTCTTTTTAACTTTagt
tttgattaacaatatcaatgggggtatgaacaaactcaatgttggtgcaa
ATAGACAAAGGCAAGATCAACGCAATGGCAGACATTATTGGAAAGAATTG
TGTTTTTGAAGATGTAAAAATtggtttcgaaaattttggtcgataagagc
aaggggggggggtctgaagcttatcAGCCCAATgccaaaaaattcgaaag
ttttttgtcgaagaccccTTACACAGGTAGCCTGGTAGCAGTCTCTTTAT
ATTCAAGATTTAACAAAACATCCTCACTTCAAATTTGTCTCTTTTTCCAT
GGCATCGAGAATAAGCCGGTATAGTAAAATGCCGGAGACGCTCGTTATGT
TTAAAAAGTTTGGGGCTTTTTTCCCCATGGGCGTCATAACTTATGGTTAT
GGGTCTGGGAACCAATTTGTGCAAAATTCATATACCGAAACCACTACAAA
AAAAAAAGCGAAATGTGTAGCAAGCAGAAGGGGGAAGAAACTTTTCTGGC
AGTGGAAAATCAATACTTGAAGtgagaaaggaaaaaaaaaggttttcatc
GTTTTTTGTTATATTTCATAATATGACGCTAAGGGTAGGGGGTGGGTGGG
TTTTTTAATTAGCATCAGAATGACGCTAAGCGTGGGAAAAATCTATATGT
GAGCGGCCCCTAAAGCAATCAATCTCAAATAAATATCAAAAAGACAAGGA
ATATTGATTGACATAGATTTTCATAATAGCCAAGCAGAATCaccatagct
tttaccaaaaaaaattatttcaaaacaaagacccaatttcagccattttc
acccaaatccaacttttttgcTGGGACTTTGTGGAAACTTTTATCCTGTC
CTAGGCGCTAGGGCAGCCAAAGGGTCGCACTTCACACGGtaacaatttca
caattttagTAAAATAAAGTTTGGCTTGAAATATCTTACCATAGAAAGGa
gcctagcctgggaatccaagctcataatcttagaaaaaacaaaaaatacc
ggGTGTCCCTGAAAAAACTTCCtcctgtttgattcaaaattgcgaaaaag
tgaaaaaaatatatagccTGAGGTGAacccgaaaaaattttttgtttctg
gTCCATCGAccgggtgaaaatttatttcatcGTCACCCGGGTGCATTTTT
TTTTGTGCATCatcgttagggttagggttagtttgtttgtttagaaaact
ttcgtgaatcagtttttgaggcgtgtgatttattgcaagtgatattttaa
attctactgtaaaatgcacgcctagaaattacttggaatgaaggttttat
cctgatcattgctatagaaatgaaatttaaatttattcatTTCAAACTAA
ACCctgttatttttgttaattcttgcttgcaactcaacttttaaggatgt
ttttttttatatacaacttggtttttataaaagaatcatgctgatttgtg
agtaaaataaatagaaacattcacaaagtgcgacttttcagtaagtaaac
agctttgtttttattgaaagagtgtgtccagttcttagagatattgtaac
acaattgaaaatataaacgatgaaaattaagtatttgaataattgCACGC
CTAGAACTAGACCACTGtaaatcaaaatctaggcgtgcgatgatcacacg
tgaatttttcttatgccgaagcctgtaGCGGTGTCAAGTTACTACAGATT
TAAGGTAAAGAAGACCATCATTTTAACTTCTACGTAGTGCTTTAAAAAAT
ATAGTTTTGGGATCAAAATTtagcgaaaattttttttttgcggccggcca
ggtgagtgtttttttcgtcacccggtggaccggaaacaaaaatattttta
gggatcgcctgattttttcgaaatcgtttagaggagggtttaacttaaat
tttggtatatcaaactttaaaattgcttcattagatcaaaagttatgaca
aaaagagtaaaagtttttttttcaaaaagagcgaaaaaagacgaaaaaag
agGGTATCAAATTAGACTAGAAAACACTGTACTTTATTGACAGTAAAGTT
TTAttcgtttttaatgatttttattgccGATTTAGAGCTCCTTTGGGATT
CATTAATGAGCATGAAGTTTCAACAAGCAACAAACTTTTATCAGAATGTT
TCCAAAAGTTTCCAAAGCTTAGCGAGTCTATATGAGTGGAGAAGAGAAAG
TTTGAGTAAGCTGAAGAAAAACATGCCTCGTCTTACTGTAGACCAAAGAG
TCTGGGTTTGCATTGAACATGCACGAACAAACAATATAAGAGCAGTTTTG
AGGCATTGGCCAAATGTCCTTCCACCATCGAAAATAACCGTTGTTACGAC
GTATCGCAAGTTTGGCCGGGAGGGGACTTGTCATAATcgaaacaaaggaa
aaagtgGGCGATAGGGAACTGCAAGGACTAAAGCAAACATGAATTTAGTC
AGAGCTTCATTTACAGCAAGATGGAATTCGATCATGTCGACGAAATGGTT
TAAATCTTACACGATCTTCTTTTCATCGAATTGTTCATGATATTAAATTT
CACCCCTACGTTTTGGTGAAGAagcaaaagttgaaaaatcgAGATCCTGT
GAGAAGGCTTACATTTTGTAACTGGTTTCTTAGAATGAACAATGTAAACT
TTTTATCAAACCTCATCATCTCTGGCGAAGCTATTTTTAGCATGAATTCA
GATGTTAATACTCGAAATGTTATCTTTTATTCGGAGTATGGTCAAGGGCA
CCCGAATGATCATTATGTTGAATTTGTGCAAGGGGCAGATCAGGTCATGG
TTTGGATGGGCGTCACTGGTCAGTGTTTAGTTCTTGGTCCACATTTTGTT
CAAGGTCGTCTTAATACGAGGGAATATCTAAAGATGGCTAGATACAATGT
TATCCAGCGTGAATTTAGAAGGCTTTGTATCAACAGAAACACAGCTTGGT
GGATCCAAGACAAGGCTACAGCTCACACTAGTAACACGTCGTTACGTTAT
CTGAGAGGTCAATTCCCTGGAAAGGTCATCAGCAACCGAGGAGATGGCGA
ATGGCCCCCAAGATCTCCGATCTTACAGTGTGCGATTTCTTTCTTTGGGG
TCAAATGAAACAGAAGAAGATTTGGGAACAACCACGACTTACAGCCACAA
ATTCTTAATCAGCTGAAAGCAGCaataacaaaaaagttttttcagaaacA
CCTggtacctcacctcacaaagttatAAGATtgtagagcttggtgcaggt
agattagtctgacacagaatgttataaacagtctgtgtgtgaacccttgt
tgacagactttctaaactttggaaacccaggcaagcacacataattaact
taccataaaaactatttcacaagctctaaagactatTATTACTTATTACT
TTCTTAGACTCTCATCGAGTATTTTTTGAGCGGCAGTTTCGTTTTCGTAG
GTCTCACTCAACAATCCATACCTTACTTAATATTGTTGAACGTATTCAGA
AATCTCTCGATGATGGTAACTTTGTGTGTGGTGTTTTTGTTAATTTGCAA
AAGACTTTTGACACTGTTGATCATTCTATTCTAATTTTAAAGGGGTTAGA
GGAAAGGCTAATGACTGGTTCAGATCATATTTATCTAACAGATCCCAGTT
TGTCTCTATTTCATCTAATAATCTTCTTTTAAAATAATCCCCCATGGTGT
TCCACAAGGCTCTGTTCTAGAGTAGAACCTCTCTTATTTTTAATCTATAT
TAATGATCTTCACAATGCAATCTTTTCaagtgaaacttttcatttcGCTG
ATGATAcccatattttacattttaatgatgATTTTCTTTCCCTTTGCAAC
AGAGTCAATCGTGACCTAAGATCCCTCCAAACTTGGCTCAAAGCCAATAA
AATATCCCTTAATGCtggaaaaacagaattttttattttcatacactgtc
gaaaaattcttccttttgttccttttctttttacttggaggtaagaaaaa
ttttcaaagttcaaatatcaaatatcttgGTGTTTTGATTGACATGCACC
TCAACTGGAAAGCCCACACTACATCTTTATCAGCTAAACTTGCCAGATCA
AATGGTATTATATCTAAGCTCAGGCACtatgtttcaacaaaaaccTTAGT
TAACATTTATTATGCTCTTTTTCCTTCCCGCAAGGTAAAACCCTAATTTT
TGGTTTTCGTACATGCGTGCTAGCTACCTTGCCGAGATTTGGTTGAGCAA
AATCAAAACTGAGTGccaaaaaattgtgaaatttagCTGGGGAGTCTTGT
TACCAAAGGAGCTGTAAAATTGGAACTTCAAATTGATACATCTCAAGAAC
TAAAACTTTCTGAAAAACTCTTATTTCCACATCAAAAGGTTACTTTCTtt
gccaataacttttgatagaattgttCCCCTAATTTCTCCCTTTCAGTAGG
TCTTCCTAttaatgtttacaaggctcttgacaaaAAACTGTTcatttgat
tgtcaatgatgacagtgacGTTAATTATATTGCTAGATCTGATAAACTGA
TGTTTGTAGTcttgggaggtcgtcagtagttcgacactttctagtccgac
agtaaaatttcccgacgttggatttgacgaatgcgtcagaaaaaacataa
aacgaaatatgaattgccgaagaggaggcacatcttttataagcagccac
gtgcttataaaaatccaaagttccgactttgaggttgggcccctaaagcc
aacttttcttaaattttgggaagcttattaggattaggctttcaaaagtc
aagaaattggatttagctgtttttacgacccttgtTGTgtgcagatttgt
aatacttgcgcagatttgtaatactttttgcgcagatttgtaatactttt
tgcgcagatttgtaatttgtaatttagatttttacttcGAGGGCATATGT
TTCTCGGGTTTGGTAGCTagaaattttacaactttttagaCATGGAATTA
CCTAGAGATATTTGCAACAATACCTTGTATACTCTCATGAGTATTAGTGC
AATTATCTCtagcttttttataaatttgataacattttattttgaatGTT
TTACTTGTATATgcactgatgatgttttttaataaaacgaaaagcttatg
ctgaaaaatatttgttgaaatgttttttgaataataattaattttctggc
tattttattaCAATTGATTATTTTATTCAATGTGCTAAATAATCACAACT
TTATTTGGGTATTATTTTCTAagtcatttttaatgcattttgttTGCAGA
ATAGAATTTGGTtaccaatgaaaatatcaattcccaattacaaatctgcg
cagagaagtattacatttctgcgcagctgaagtattacaaatttgcgcaa
agtttattacaaatctgcgcaggtattactaatctgcgcagaaagtatta
caaatctatgcaaggtattacaaatctgggCAGGTATTACAAATGTGCGC
ATGTATTACAAATCTGTGCATAACACCCTTCTTTGGGGGGAGGCTGGAAT
TAAAGTTAGTGGTTTACAACCCGTATAGCATAATTCTGAACAtacaaaaa
ggcacccttaaaggcggttttttctttttgctataaattatctttgtgca
aatttgattggtcccttatttctaattatgtcaaaatgctgCCAAAATGA
ACTATTATCAACATTATCTCAGttaaaaacccttattcaacattcgacac
tctaaaatcttttgttttcagacaaaagtgacgtcggaaaaaaagacttc
taaattctaaatttattttatagatttggACTATTTttctgtcggactag
aaagtgtcggactagtgacatgcacccatAGTCTTGACCCCCTTTGaaaa
atcatattctggttttcatgttatcgtcaactgctctaacttgggacaga
ACATGGGACAGccattcggccaccatttcacagAACTTCCATAGTTCCAA
AGTCATTAATTAACATAACCACGAATCATAGATAGACACCTGGtagaaat
agaatggaagttACAGTCAAGATAGGTCCTTGTCAAAGAAATTATTGGCA
TATGATAACCTGCCAGGACACTTTGATTTTCATGGATAAAGCTCCTATCA
CTAATTTTCTATCGTTAACTTGGGATTGTTAAAATCTTATCGATAAAAGT
CTATCAATAGGCCTATGTTTGTATTGATGGAATCGATAATTTAAAACTGT
ATCGATCCTTTTCCTAAGGAAGTTCACATTGTCCTTGCCGGAAAAATTAT
TGACATGTGATCTAAGTAGCATACTAAGATAAACAATAAACAATAAATAT
AAACGATAAATAATaattacaaacaaacaaacaagaacCTGTTATATTAT
AGCTCCAGTTAATAGGATATCATTATTGGCTAcacagtgaattttttttt
ctccaaaggaACTGAAATTGATGACTTTTACTTAAATTATTCACTCTTAG
ATCTTcttaagagagaaaaaaaaacataaatgcATTCCTCACTTTCACCA
CATTTACACCAGAATTGCACAGACATTATCGAAGCATTTGAAAATTGTCA
TAAAGAATACGTGATTGGAAAGTTCTTTGGAAAATGTAACAAACTGAAAT
TTCAATTAGCAAAGTGTTTTGAAGAAGACACCAAGGAAAGAAGACGTCAA
AACCGTGAAAAAGGAATTCAACAAAGGAAGGATTTCAATGATAAATATAA
TGAATATCTGAGGActggaaaaaaagaatgaaatggttttatctcaaatc
aaatgaataaTGCACTATTTGAAATTTGTTTGTATGTTATATATCGTCCT
ATGAGGTGACATGAAAAAACTATTCAGGATTTTAGATCTCTTTGGACGTA
TAAGCTAACACAGACGATTTCCAGACCTAGATTTAGGCAAAATCAGTTCA
ATAAGTTGTTTTACAGTCCCAACTGACCCTGAAATACAAAAGATTGATAT
TAAAATAACATTGTCATCTTTCTAAAGccttctaatttttttcttttgtt
tttttatatttaaaaaccATCAATTGATGATTTTTAGTTCTTCAATTATT
TTAGGACCAtaatatattttaataaaaccTGGGCTGTGAAACAGCAAACT
AATTTggcctttctttttcttttttattgtcaggcgaaccctaaaaatat
ttttgtttccggtccaccgggtgacgaaaaaaacactcacccggccggcc
gcaaaaaaattttttttgctaaatttcgNcttgattttttaaagcactcg
tagaagttaaaatgatggtcttctttaccttaaatctgtagtaacttgac
accgctacaggcttcggcataagaaaaGTTCAAGTGTgatcatcgcacgc
ctagattttgatttatagtggtctaggcgtgcgattattcaaatacttaa
ttttcatcgtttatattttcaacTGTGTTACAATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTCTAAGAACTGgacactctctttcattttgaatatttatctt
caattgctaaaggctccaaactgtgattacgaagtgaacttttttgagaa
aaaagtagagggagagaaacattttttaaatcctcactttacgaatgttt
ctttttattttactcacaagtcagcacgattccttttataaaaacaaagc
tgtttacttactgaaaagtccccactctgtgaatgtttctatttatttta
ctcacaaatcagcatgattcttttataaaaaccaagttgtatataaaaaa
aacattcttaaaggTTGAGTTGAaagcaagaattaacaaaaacaatgcag
ggtttagtttgagatgaataaaatttcatttctataacaATGATCATCGG
CTNAGGGTttagtttgagatgaataaaatttcatttctataatATAAAAC
CTTCAATCCAAGTGATTTCTAGGCGTATTTTAcagtagaatataaaatat
cacgtgcgataaatcacacgcctcaaaaactgattcacgaaagttttcca
aacaaacaaactaaccctaacgatgatgtacgaaaaaagaatgcggccgg
gtgacaacgaaataaattttcacccggccggtggaccggaaacaaaaaac
tttttcggggTCGCCTCAGTTgttatatttcaatttttttaaggttttgc
atTGATATTATTATCAACACTTATTTGTCacagatttttttgaattacAT
TGAgagctaaaaattaaaaaaatgatatttataaaaagttttctattttt
ttttacctGTACTTCAAGTCTTTACTACTGAACCTTAAATGAAAACTATG
ATCTAGATTTTGATTATTATGTTTCAAAATATATcctggaattttcaaaa
catctcTTGAAATTAGCATTCTACTATTTCCGTTTCTTTAATGtttcaga
tcaaaatttctaaataacAATCATGAGGGATATAAAAGAATGGTCATTGC
ATAATGGGTGTACCTGTTAGCACACTTGTTTACACCTCCCAAAATAACAA
TAACAACCGGCGTGAACACATCAACAATAGTTGTGTAACTGAAACACACA
GTAGATTGATACAAGTCATGCCAGCTGATGATATTAGACGGGTAAGTGAT
CCTATATATTATAAGCCAAGAGggtatcaaaaatatttatgaccttattt
ttattattaggGATCATTCATAATAAAAATCAGGTGGAATAATGCTTATT
GTCAAAAACTCTCaaaagtttttcctttttctgagcTGTTGTACCCCTAA
TTTCTTGTTATAATTGTCCACTTTGGTTAAAGATTTCATCTCAGTTTTTT
TGGAAAGTCATAGAgaagtttttaagaaattttttaaaagctaatttgtt
ttgatatttttgactatcttcattttttcagaaaGATGGGGAACTTTTAA
AGTACAAGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGATTGGAA
AGATCTTATTTACATTATTATGAAACAAAACACGTAAGTCGaatcttttg
tttgtttttaaaagtcTCATTCTACTTGTTTATTGGATTAGCGTTTGAAT
GTTtaactttaaaactttaaaaccatGCATCTTTTTTGTGGTTAGCTGAC
CTTTTGGACCTTTACCTAGCACtcttttttagatttctttcTAAAAGCTT
TTGTAAATTGTTAGATAGTCTTaaccctgggggggggggcactcgatttc
gaaacgacggcatgtgccgcctaaaaaatggctttttacggcgtatccag
ctaaaagaagacccttgtagtgcactctatcaaaagtaggATGTACTGTG
CATTTTTAGCGGGGTCTAGAAAAACCTACctttaagggcggcacatgccg
tggtTCGGACCATATGGGTGCCCGCCCTCCGGGGCCTTAACACATCAGTA
GTTAAAATAAATGATTGTAAAAGTCAATTTGTAACAAAGATCTTTTAGAa
ccaaatttatttcaaaattttgaagtaGCACATTTCTTCAGGTTTCATGC
CTTACGGCAATCATCAGACGTACAAACCAAACATGCATGTATCAAACATA
ACCAGTCTTGATTTTTAGAGTCACCAACCAGTAGCCACCATTACACGTGG
AGAAATCACACAGGTCAAACAAAGTACTGCATACCCTGGACGAAACAATG
TTTTCGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCAAGCTAGT
TCACCGGTATGTTTCAATATCCTCGAAGGGAGAAAACATTAACGTAGTAG
CTAATTTTAAtcctacagttgactctctctaattcgaacctctacttttc
gaatctttctataatacGAACTAAAATGTTGGCCACTCAGCCAGGAGTTA
GTATaaatactttctgtaattcgactATCTCTAATTCGAAGGAAATTCTT
GGTCCTTTGAagagatcgaattagagagagtaaaTTGTATTTCCCTGGAC
TTCCActcctttttttaattctaaacTGAAGGACATTGTTGCGTtttaaa
tttccaaataattaTCCCGTTGTATTCATAGGGAGAAATGGTATCATGGA
TGCAAGCCTTGTCTACTGTTCCTCTTATGGTCAACCCAGCCCAGGTAAGC
ATTATTCACGCCAAAATTAGGTTCCTTACTCTTTCGAAGTAAGCTAACAA
GAAAGCGCATATCCGTTCGCAAAAACGACTTTACAAGGGatgctttaaag
gttttgttttaaacaaagtgatatcgtttgcttacccGTCAATTTTAAAT
CTCaagttttttcacattgaatggacacgaatgtggagcaagattggtca
gaaagagaaagagaaaatttttttgttcattcagCACAAACTCGAACACA
ATTAACAATAGGAGACAACGGCCTGATATAAAACCAGTGTCTGATATGAA
GCTGGAGTCAAGAATAGGATTTAAACATTTATTCTACTTTTTGTATTAGT
ATCCAATGATTCCGGCAGATCAAGCACCTCAAATGCCACCTGCCCCTTTC
CCTCCCACACATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGA
TTCACCGTACAGGGAGTTGATGAACGATGCACACCACACTGCTTATCATT
CCAACACACCACACGGTAAAAGATGTTTCGCTTTCTTCCGAGGGATAAAT
CTGATGTTTAAAGAAATTTggtagtaaaatgtaaattgTGCGAACCACTA
CACTAGGTGGGGTTGTCATATTTGGTGTTATCGGTTGGTTTTTATAAATT
TAAGGACAAAATGGAGCGAACGAAACTTGATAATATCTTaaacttttcat
tgtttgagttgttttttttgtatggCAATTTAACATCAACTCTTGAGCAA
AATAACGTGATGGCGGAGTGTTTTCCTTCtttatttctgatatttttttc
tattttctcctCACGACTAGAACGTAGTCTAGGTCACGTAGGCCACGTGT
CACGGAGAAAACATtcatctgatattccgatggcggattggcggccgccc
atgctaaagctctgaaggagcgggtcaatttcccatcggagaggaatgat
ggTTGGCCTTTGATGTGCgcacataaacataaacattcccgaaaacgagg
gcctcccgctgcaaattccttgacgcggtcttgcGAAATTTCGTAATCtt
aaccttccagatgttgaaaaatttCCCGACCTTCcaagctttagcgtgtc
ggatgaaaatttctacatctGGGTTCCAGATAAAGAAAACAAGGGAGTAA
GGGAGTGTAAGAGACCTAAATTAAGGAGAAGTGGTCACATCCCAGTGGGA
ACCATGACTTTTAAAAGCTAAAATACGAGTTATCACTAAGGGAATatttt
ggttgaaaaaatctAAGACGACCTTTTAATTCGAAATCTTTGGATTACAC
ACTTATACATTATTTCAATTCTTATTCAGATTGCATACACGACAGTCCGC
CACCACCCTACACTGTCACCCCAATTACACCTCAACCACCCCACAATCCT
AATTATTAAGAGTATGCAGAATGATTTCTAGTTCAGATGGATATATTCAC
GTGTTTGATGCGAATGAATGGAACGAGATGTTGGTGTCGATATGCAAATA
CCAAGTTCCAGCAAGCCTTCTAAGGcttatttttccgttaaatcaGGTTA
AATATGTACGATGGAATGGCGGGTCACATTGTTTCGGGGATAAATAAatc
taaatatttattttttgtactTTAAGTGGATTTGTTTTTACGAGACgaga
atttaaaaatttcgcgtggatttattttcgcgaatcaagggtcttcaaaa
atttcgcatggattaaatttcgcgaattaggCCTTCTTTATTTGATTTCG
CGACTACCACCATGTAAATCGAACAATTTTAGAAAAGAGATGAAGGCAGA
CAAAGTCactcaaaagctttcaaaaaaaccACAAGGAAGGTACTCTTAGT
AGTCCAGGGAAAGTGTGCATCAATTGTGCGTTTTTGATtagaaaacatga
aatttggtacagtggtaccttagggggtaagaaacattttaagcctctga
cccacttccggaacacctgtttgtgtattttacagaccagaatgcctcCC
AGGCATTTCATGATATGTATCtcaaaatggactgggtccgtGAAATAAGC
CATaggagtaatttacagaccagaacggcTCCCGGgcatacaaaaaatat
ttttatc

Coding sequence (CDS) from alignment at sc0000045:791746..811452+

>TCONS_00004532 ID=TCONS_00004532|Name=TCONS_00004532|organism=Clytia hemisphaerica|type=CDS|length=4122bp|location=Sequence derived from alignment at sc0000045:791746..811452+ (Clytia hemisphaerica)
ATGGGTGTACCTGTTAGCACACTTGTTTACACCTCCCAAAATAACAATAA
CAACCGGCGTGAACACATCAACAATAGTTGTGTAACTGAAACACACAGTA
GATTGATACAAGTCATGCCAGCTGATGATATTAGACGGaaaGATGGGGAA
CTTTTAAAGTACAAGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCG
ATTGGAAAGATCTTATTTACATTATTATGAAACAAAACACAGTCACCAAC
CAGTAGCCACCATTACACGTGGAGAAATCACACAGGTCAAACAAAGTACT
GCATACCCTGGACGAAACAATGTTTTCGAAATAGTACAGAAAAGTGGAGT
CATCTGGTATTGCCAAGCTAGTTCACCGGGAGAAATGGTATCATGGATGC
AAGCCTTGTCTACTGTTCCTCTTATGGTCAACCCAGCCCAGTATCCAATG
ATTCCGGCAGATCAAGCACCTCAAATGCCACCTGCCCCTTTCCCTCCCAC
ACATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGT
ACAGGGAGTTGATGAACGATGCACACCACACTGCTTATCATTCCAACACA
CCACACGATTGCATACACGACAGTCCGCCACCACCCTACACTGTCACCCC
AATTACACCTCAACCACCCCACAATCCTAATTATTAAATGGGTGTACCTG
TTAGCACACTTGTTTACACCTCCCAAAATAACAATAACAACCGGCGTGAA
CACATCAACAATAGTTGTGTAACTGAAACACACAGTAGATTGATACAAGT
CATGCCAGCTGATGATATTAGACGGaaaGATGGGGAACTTTTAAAGTACA
AGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGATTGGAAAGATCT
TATTTACATTATTATGAAACAAAACACAGTCACCAACCAGTAGCCACCAT
TACACGTGGAGAAATCACACAGGTCAAACAAAGTACTGCATACCCTGGAC
GAAACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGC
CAAGCTAGTTCACCGGGAGAAATGGTATCATGGATGCAAGCCTTGTCTAC
TGTTCCTCTTATGGTCAACCCAGCCCAGTATCCAATGATTCCGGCAGATC
AAGCACCTCAAATGCCACCTGCCCCTTTCCCTCCCACACATGCGTATCCA
AATAACGCCCAAGCACCGCCCAGATACGATTCACCGTACAGGGAGTTGAT
GAACGATGCACACCACACTGCTTATCATTCCAACACACCACACGATTGCA
TACACGACAGTCCGCCACCACCCTACACTGTCACCCCAATTACACCTCAA
CCACCCCACAATCCTAATTATTAAATGGGTGTACCTGTTAGCACACTTGT
TTACACCTCCCAAAATAACAATAACAACCGGCGTGAACACATCAACAATA
GTTGTGTAACTGAAACACACAGTAGATTGATACAAGTCATGCCAGCTGAT
GATATTAGACGGaaaGATGGGGAACTTTTAAAGTACAAGAACGTTTTTAG
TGGATGGGGCAAAAGATATTTTCGATTGGAAAGATCTTATTTACATTATT
ATGAAACAAAACACAGTCACCAACCAGTAGCCACCATTACACGTGGAGAA
ATCACACAGGTCAAACAAAGTACTGCATACCCTGGACGAAACAATGTTTT
CGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCAAGCTAGTTCAC
CGGGAGAAATGGTATCATGGATGCAAGCCTTGTCTACTGTTCCTCTTATG
GTCAACCCAGCCCAGTATCCAATGATTCCGGCAGATCAAGCACCTCAAAT
GCCACCTGCCCCTTTCCCTCCCACACATGCGTATCCAAATAACGCCCAAG
CACCGCCCAGATACGATTCACCGTACAGGGAGTTGATGAACGATGCACAC
CACACTGCTTATCATTCCAACACACCACACGATTGCATACACGACAGTCC
GCCACCACCCTACACTGTCACCCCAATTACACCTCAACCACCCCACAATC
CTAATTATTAAATGGGTGTACCTGTTAGCACACTTGTTTACACCTCCCAA
AATAACAATAACAACCGGCGTGAACACATCAACAATAGTTGTGTAACTGA
AACACACAGTAGATTGATACAAGTCATGCCAGCTGATGATATTAGACGGa
aaGATGGGGAACTTTTAAAGTACAAGAACGTTTTTAGTGGATGGGGCAAA
AGATATTTTCGATTGGAAAGATCTTATTTACATTATTATGAAACAAAACA
CAGTCACCAACCAGTAGCCACCATTACACGTGGAGAAATCACACAGGTCA
AACAAAGTACTGCATACCCTGGACGAAACAATGTTTTCGAAATAGTACAG
AAAAGTGGAGTCATCTGGTATTGCCAAGCTAGTTCACCGGGAGAAATGGT
ATCATGGATGCAAGCCTTGTCTACTGTTCCTCTTATGGTCAACCCAGCCC
AGTATCCAATGATTCCGGCAGATCAAGCACCTCAAATGCCACCTGCCCCT
TTCCCTCCCACACATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATA
CGATTCACCGTACAGGGAGTTGATGAACGATGCACACCACACTGCTTATC
ATTCCAACACACCACACGATTGCATACACGACAGTCCGCCACCACCCTAC
ACTGTCACCCCAATTACACCTCAACCACCCCACAATCCTAATTATTAAAT
GGGTGTACCTGTTAGCACACTTGTTTACACCTCCCAAAATAACAATAACA
ACCGGCGTGAACACATCAACAATAGTTGTGTAACTGAAACACACAGTAGA
TTGATACAAGTCATGCCAGCTGATGATATTAGACGGaaaGATGGGGAACT
TTTAAAGTACAAGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGAT
TGGAAAGATCTTATTTACATTATTATGAAACAAAACACAGTCACCAACCA
GTAGCCACCATTACACGTGGAGAAATCACACAGGTCAAACAAAGTACTGC
ATACCCTGGACGAAACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCA
TCTGGTATTGCCAAGCTAGTTCACCGGGAGAAATGGTATCATGGATGCAA
GCCTTGTCTACTGTTCCTCTTATGGTCAACCCAGCCCAGTATCCAATGAT
TCCGGCAGATCAAGCACCTCAAATGCCACCTGCCCCTTTCCCTCCCACAC
ATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGTAC
AGGGAGTTGATGAACGATGCACACCACACTGCTTATCATTCCAACACACC
ACACGATTGCATACACGACAGTCCGCCACCACCCTACACTGTCACCCCAA
TTACACCTCAACCACCCCACAATCCTAATTATTAAATGGGTGTACCTGTT
AGCACACTTGTTTACACCTCCCAAAATAACAATAACAACCGGCGTGAACA
CATCAACAATAGTTGTGTAACTGAAACACACAGTAGATTGATACAAGTCA
TGCCAGCTGATGATATTAGACGGaaaGATGGGGAACTTTTAAAGTACAAG
AACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGATTGGAAAGATCTTA
TTTACATTATTATGAAACAAAACACAGTCACCAACCAGTAGCCACCATTA
CACGTGGAGAAATCACACAGGTCAAACAAAGTACTGCATACCCTGGACGA
AACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCA
AGCTAGTTCACCGGGAGAAATGGTATCATGGATGCAAGCCTTGTCTACTG
TTCCTCTTATGGTCAACCCAGCCCAGTATCCAATGATTCCGGCAGATCAA
GCACCTCAAATGCCACCTGCCCCTTTCCCTCCCACACATGCGTATCCAAA
TAACGCCCAAGCACCGCCCAGATACGATTCACCGTACAGGGAGTTGATGA
ACGATGCACACCACACTGCTTATCATTCCAACACACCACACGATTGCATA
CACGACAGTCCGCCACCACCCTACACTGTCACCCCAATTACACCTCAACC
ACCCCACAATCCTAATTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002550XLOC_002550Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004532-proteinTCONS_00004532-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004532-exon-sc0000045-1491911889:791746..791836TCONS_00004532-exon-sc0000045-1491911889:791746..791836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:791746..791836TCONS_00004532-exon-sc0000045-1510915933:791746..791836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:791746..791836TCONS_00004532-exon-sc0000045-1575043694:791746..791836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:807645..807836TCONS_00004532-exon-sc0000045-1491911889:807645..807836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:807645..807836TCONS_00004532-exon-sc0000045-1510915933:807645..807836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:807645..807836TCONS_00004532-exon-sc0000045-1575043694:807645..807836Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:808127..808228TCONS_00004532-exon-sc0000045-1491911889:808127..808228Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:808127..808228TCONS_00004532-exon-sc0000045-1510915933:808127..808228Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:808127..808228TCONS_00004532-exon-sc0000045-1575043694:808127..808228Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:808814..808951TCONS_00004532-exon-sc0000045-1491911889:808814..808951Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:808814..808951TCONS_00004532-exon-sc0000045-1510915933:808814..808951Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:808814..808951TCONS_00004532-exon-sc0000045-1575043694:808814..808951Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:809277..809339TCONS_00004532-exon-sc0000045-1491911889:809277..809339Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:809277..809339TCONS_00004532-exon-sc0000045-1510915933:809277..809339Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:809277..809339TCONS_00004532-exon-sc0000045-1575043694:809277..809339Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:809695..809860TCONS_00004532-exon-sc0000045-1491911889:809695..809860Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:809695..809860TCONS_00004532-exon-sc0000045-1510915933:809695..809860Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:809695..809860TCONS_00004532-exon-sc0000045-1575043694:809695..809860Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1491911889:810675..811452TCONS_00004532-exon-sc0000045-1491911889:810675..811452Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1510915933:810675..811452TCONS_00004532-exon-sc0000045-1510915933:810675..811452Clytia hemisphaericaexon
TCONS_00004532-exon-sc0000045-1575043694:810675..811452TCONS_00004532-exon-sc0000045-1575043694:810675..811452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:791746..811452 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.4741	14.3973	79.5138	92.6252	80.8229	60.1336	35.2571	37.1848	26.091	27.79	27.1381	21.0698	17.7606	16.4903	10.2745	13.9854	16.9668	17.0304	18.3106	20.281	18.5668	19.0545	11.3499	13.7999	30.3456	28.3187	11.9499	9.13152	11.4212	10.4299
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH_dom-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004532 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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