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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004523 ID=TCONS_00004523|Name=TCONS_00004523|organism=Clytia hemisphaerica|type=transcript|length=657bp
GTTGTGTGTCATTATAAAAGCTGAATAATTCACTGGTTTAGATATTGTAT
GATTTATGTTAGCTTTGGAGGAACGATCAAAAGCTGAAGTTGAAATCGGT
GTTTTTACAAATATGAAAGGAATTTCCCTTGTGGTAATTTTAATGTCATT
ATTTGAGTCAACTCTATCTACCTGCCGCGAAGGACGAGACTCGAGACACT
GGATTTATGATTGCTCAAGATCAGAATATACTTCAATACCTTGGAAGGAG
ATTGGATACATCAGCTCTGAGGCAAAACTTTTCTTGANGCAACCTTGAAA
AAAGAGCCACAgggtttttacatgaatttttcttctttttatacccaaag
gcaacttttgacaaatgggcttaaaaaattggtCCTAACATCCCCCCCTA
NATTGCTCAAGATCAGAATATACTTCAATACCTTGGAAGGAGATTGGATA
CATCAGCTCTGAGGCAAAACTTTTCTTGGACGAAAATAACATCAGTAAAC
TCGAGCGAGCAGATTTAgtcaaagcaaaaaaagtaaatgtTCTTCACTTA
CACGGGAACCctatcaaaatattgaaatcaaaCGTGTTTTATGACCTCAA
AAAGCTGTTTGAGCTAACGGTAAGTGTAGGGGGGgatgttattttgcaaa
aatggca Run BLAST on NCBI transcript from alignment at sc0000045:630913..632416+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004523 ID=TCONS_00004523|Name=TCONS_00004523|organism=Clytia hemisphaerica|type=transcript|length=1504bp|location=Sequence derived from alignment at sc0000045:630913..632416+ (Clytia hemisphaerica)
GTTGTGTGTCATTATAAAAGCTGAATAATTCACTGGTTTAGATATTGTAT
GATTTATGTTAGCTTTGGAGGAACGATCAAAAGCTGAAGTTGAAATCGGT
GTTTTTACAAATATGAAAGGAATTTCCCTTGTGGTAATTTTAATGTCATT
ATTTGAGTCAACTCTATCTACCTGCCGCGAAGGACGAGACTCGAGACACT
GTAAGTTTAACCTTTTGGATCTTTATAGTGGCCCCTATATTATGTATTCT
TTTAAACCCCTTGCAACCTCAATAAAAACTGGTTAGTTACATTGAgaaat
tgaatataaaaaaacataagtAACTCTGTACCATATTAATTTGAATAgac
gccccgggcgtttattgaatgttttgtttttttaagaggGGTGTTTATTC
TAGGGGGCGTTTGCTAAATAGTTTTTAACCAAGGTCACTTATATTAATTG
GAACTTTGTTTTGCCTTTTTATTATTTGAGTACAAATATGTCAATATAGG
TATGAAGAAACgggtcaaaatcagttcaagttttaattattatctaactt
ttccttcaaattttaattccttacagctacttgtttcgaataaacgcccc
tcttaGAGGTGTGTAATCGAAGGaggcttttattttatttgagcGGCcgt
ttattgaaagtttttcctcAAAGGagaggcgtttattcgagggggcgttc
aAAAGAAGAGGCGTTTGAAAGAAGGGGGNCGCCCCTCTTAGAGGTGTGTA
ATCGAAGGaggcttttattttatttgagcGGCcgtttattgaaagttttt
cctcAAAGGagaggcgtttattcgagggggcgttcaAAAGAAGACGCGTT
tgaaagaagggggcgtttattcaaggggtgtttattcgaagtaatacggt
atcgATTTATGAATGGTCTTATAGTACAGTCAACCTTCTCAGTGATTCTT
TCAAATACtcttcaaaacacaaaaacatcGGGAAACACCAAGCATTTTTC
ATGGTTTGTAGATGAtcgttttttaatttcattgtcttttattTCAGGGA
TTTATGATTGCTCAAGATCAGAATATACTTCAATACCTTGGAAGGAGATT
GGATACATCAGCTCTGAGGCAAAACTTTTCTTGANGCAACCTTGAAAAAA
GAGCCACAgggtttttacatgaatttttcttctttttatacccaaaggca
acttttgacaaatgggcttaaaaaattggtCCTAACATCCCCCCCTANAT
TGCTCAAGATCAGAATATACTTCAATACCTTGGAAGGAGATTGGATACAT
CAGCTCTGAGGCAAAACTTTTCTTGGACGAAAATAACATCAGTAAACTCG
AGCGAGCAGATTTAgtcaaagcaaaaaaagtaaatgtTCTTCACTTACAC
GGGAACCctatcaaaatattgaaatcaaaCGTGTTTTATGACCTCAAAAA
GCTGTTTGAGCTAACGGTAAGTGTAGGGGGGgatgttattttgcaaaaat
ggca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004523-exon-sc0000045-1491911889:630913..631112 | TCONS_00004523-exon-sc0000045-1491911889:630913..631112 | Clytia hemisphaerica | exon |
| TCONS_00004523-exon-sc0000045-1510915933:630913..631112 | TCONS_00004523-exon-sc0000045-1510915933:630913..631112 | Clytia hemisphaerica | exon |
| TCONS_00004523-exon-sc0000045-1575043694:630913..631112 | TCONS_00004523-exon-sc0000045-1575043694:630913..631112 | Clytia hemisphaerica | exon |
| TCONS_00004523-exon-sc0000045-1491911889:631960..632416 | TCONS_00004523-exon-sc0000045-1491911889:631960..632416 | Clytia hemisphaerica | exon |
| TCONS_00004523-exon-sc0000045-1510915933:631960..632416 | TCONS_00004523-exon-sc0000045-1510915933:631960..632416 | Clytia hemisphaerica | exon |
| TCONS_00004523-exon-sc0000045-1575043694:631960..632416 | TCONS_00004523-exon-sc0000045-1575043694:631960..632416 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045 | supercontig | sc0000045:630913..632416 + |
Blast
The following BLAST results are available for this feature:
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