|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004443 ID=TCONS_00004443|Name=TCONS_00004443|organism=Clytia hemisphaerica|type=transcript|length=962bp
CTCCGACATTTCTTTTAACGAAGCGTTTTCTATTATGTACGTCAACATCA
AAGGTAGTAAGACCGACCCGTTCAAGTCTGGGTGCGTCATCCGACTTGCC
GCCATCCCGCGCCACACCCTTTACCCAGTGAACGCTATGCGTACCTTCCT
GGCAGTACGGGGTTCGTCTCGAGGCTCTCTCTTCACCCTCAGCTCTGGTT
CCCATATCTCCCGCAGTCTAGTCCAATACTTTTTGTACATGGCGCTTCCA
GGCGTCCCTAACATCCGCACTCATAGTTTCCGCATTGGCGGCGCTTCTGC
TGCTCTTGCTGCGGGTGCGTCCGATGCGCTCATTAGGGTCTTGGGGCGTT
GATCTAGTGACTGCTACAACCGGTACATTCGGGTATCTGACACGCAAGTT
TCGCGCTTTCAACTCGATATTTCTTCAGCGCGCGTATCTCGCACTTGGGA
GTCTCATTCACTTTAAGATTTGCCGCGAACATTCGTCCCTAGTGGGACTT
AGCAGCCTTCCCGCCAGCTGCCGCTTCGGAGCACCTTACTTGTACAtaat
ttttgactttattttgttttcatcttttacaaaaccttgaaattCACATA
CAATTAATATTTTTCAGGTCTTTCAATAGTTTATGTCACAAGAAAATCAA
ACTCCGGCGGGTGGGACATTGCGAAAGGACAGAGGCAACTTTCCAAAGGA
GTTCAAAGCTGGGAAACTAGGATAGGACAAACAAAGCACGTGGTTGATGG
CAAACTCCTTGCAATACGACTTCAAGATTCTAAGGAAGTTTACTTCCTAT
CTATCATGCACCGTCCAAAATAAGTCGCTGTGGCAAAGAAAGATCGAAAC
AAAAATGATGTCATGAAAGAGAAACTTGTGAATGACTACAATCAAAACAT
GGGCTTTGTTGATAAATGTGATTCCGTTATCAGCCAACATGAAGCCATCT
ATTATAATGCCT Run BLAST on NCBI transcript from alignment at sc0000044:227696..228657 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004443 ID=TCONS_00004443|Name=TCONS_00004443|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at sc0000044:227696..228657 (Clytia hemisphaerica)
AGGCATTATAATAGATGGCTTCATGTTGGCTGATAACGGAATCACATTTA
TCAACAAAGCCCATGTTTTGATTGTAGTCATTCACAAGTTTCTCTTTCAT
GACATCATTTTTGTTTCGATCTTTCTTTGCCACAGCGACTTATTTTGGAC
GGTGCATGATAGATAGGAAGTAAACTTCCTTAGAATCTTGAAGTCGTATT
GCAAGGAGTTTGCCATCAACCACGTGCTTTGTTTGTCCTATCCTAGTTTC
CCAGCTTTGAACTCCTTTGGAAAGTTGCCTCTGTCCTTTCGCAATGTCCC
ACCCGCCGGAGTTTGATTTTCTTGTGACATAAACTATTGAAAGACCTGAA
AAATATTAATTGTATGTGaatttcaaggttttgtaaaagatgaaaacaaa
ataaagtcaaaaattaTGTACAAGTAAGGTGCTCCGAAGCGGCAGCTGGC
GGGAAGGCTGCTAAGTCCCACTAGGGACGAATGTTCGCGGCAAATCTTAA
AGTGAATGAGACTCCCAAGTGCGAGATACGCGCGCTGAAGAAATATCGAG
TTGAAAGCGCGAAACTTGCGTGTCAGATACCCGAATGTACCGGTTGTAGC
AGTCACTAGATCAACGCCCCAAGACCCTAATGAGCGCATCGGACGCACCC
GCAGCAAGAGCAGCAGAAGCGCCGCCAATGCGGAAACTATGAGTGCGGAT
GTTAGGGACGCCTGGAAGCGCCATGTACAAAAAGTATTGGACTAGACTGC
GGGAGATATGGGAACCAGAGCTGAGGGTGAAGAGAGAGCCTCGAGACGAA
CCCCGTACTGCCAGGAAGGTACGCATAGCGTTCACTGGGTAAAGGGTGTG
GCGCGGGATGGCGGCAAGTCGGATGACGCACCCAGACTTGAACGGGTCGG
TCTTACTACCTTTGATGTTGACGTACATAATAGAAAACGCTTCGTTAAAA
GAAATGTCGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004443-exon-sc0000044-1491911889:227696..228657 | TCONS_00004443-exon-sc0000044-1491911889:227696..228657 | Clytia hemisphaerica | exon |
| TCONS_00004443-exon-sc0000044-1510915933:227696..228657 | TCONS_00004443-exon-sc0000044-1510915933:227696..228657 | Clytia hemisphaerica | exon |
| TCONS_00004443-exon-sc0000044-1575043694:227696..228657 | TCONS_00004443-exon-sc0000044-1575043694:227696..228657 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:227696..228657 . |
Blast
The following BLAST results are available for this feature:
|
