TCONS_00004433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004433
Unique NameTCONS_00004433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004433 ID=TCONS_00004433|Name=TCONS_00004433|organism=Clytia hemisphaerica|type=transcript|length=2204bp
TTAAAccacaaattaaaaacaaaaacattgagcAAATTGCTCGCGCAtac
aaatattttccaaaaattttaggttcaaaatttcaacagcgaaagaaaag
aagaaagcaACCAACAAAACCTGGGAACTATGTCTGTCAATAAAATTGAT
GCTGGAAAGGGTCGTCTAACTCTTCAAGGAGACTAtGTTGTTCACCATGA
GAAAAATATTACATTCTCTTTGGAAGGAGATCGTTTACCAGCAGTTTTGA
AAGGAACACATTCTGGAGACGTTTTTATTACAAATCTTAGGCTTATTTTT
GTCAACAATGGCAAAGGATATAATACTTTTTCAATGGACTTCCAAAGTAT
TCGTAACACAGAGgTCAAACAGCCCATCTTTGGAAGCAACCACATCAAAG
GATATGTAAAGTCTGAAAtcaatgGCGGTTGGGAAGGAAGTgccaatttc
aaaattgattttcctAAAGGTGGAGCAATCGAATTCGCTGAACGGTTTCA
AAAGACCGTCAAAGAATCATTACGACACCGACAAGCTGGTGTTGCCCCTC
CACCCCCTATGCAACCAACATATGGTGGAGGTTACTACCCACCTCAAGGA
CCCCCACCCATGATGGCTGGTGGTGGTGCACCAGGTTATTACCCACCTCC
CCAACCTGGCTATTATCAATATCAATCAAGTGCACCACCTGCTCCTGGTT
TTCAACCCAATATGGCTGGCCCGCCACCACAAGGGGGTCCTGCGCCACCG
CCATACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGATATAATAG
CGGTGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATACTGCTT
ACATCCCGAACGATGCACCGCCACCGTATAATCCAAACTACAAGAAGGAC
GATTAAGAACCTCATGAAACGTGTATcatatttagaataaaatttatCAC
AAACATACTTTAAAAACGAGACGCTGGGTAAAGTTGTAGTTGTAACGTAT
GGCGAAATCTAAGTAAAGATATTCATTGGGTTCCTTACTTGAGAAGAACA
TATaacaagaaaatcaaagaacAAATGAAAAATATGGTTATGTGCGTTTG
TTTTATGAACTTATTCAAAGGACCTATCTTGCTTGAAAACTGGTTATTTG
TAAAAACTCACCGGGTGAAATTTATAcatgaaatttttattgtttttgtt
tttaattttaattttaaaagagCTTCATAAGATATGGCCCATTGAATAAA
TCTTGACATATTGGGTTTTTTACCCTTAGGAGGCGAaagacgtatatata
cgttttgaataggtcattttaccgatacacagtcttttggtcataactcc
tgaccacttgagattcagagagaAAAAATCCGTNGGCcgtaggggggggg
gctaaaaggtcgagcagcaattggtacctgattttttactgtggctaggg
gggactaaccatgttaggggtcacctattttttcagatagacctgggggc
tagattctatATTTGGTGATTAAATTAAGAGCAGCCTACCAGACCATAGG
TTGGCACTTTTtcatcttatattttaatctaagctcaaattttcaaaatt
tcccccattgggccaaaccatggttggccctcgcggtgtcaccaaacttc
agcccccctaatatgaaaaaaaaaatctgttattttttgtagctgagaga
aagagctttccaacgataccaaagttgatacctgaatcgtttgtcctggt
cgagaaattgcctttgaaagaataaatttccagaaaaatatgatgaactt
tttaacctttttcaaaaaagttagcggcttaataaaaaaggttaataaaa
attttttaaatctttaaaactggaccaaactgtccaaaatgactattgct
actaagagaaagtagataaaggcattttaaatgaaaaatgaaaaacaatt
gaGTCCATGTTAAGGGATGGCCCTGTTCAGAAATGGATCATGCCCTCAAT
CAAGCTATTGACTCTCACAGAGTGCGAGTTAACTTATAATGAATAAATTT
ATTTCTTGGGAAGTCGAGAATCTTTCTAATTTACTATCTTGTGTATCATA
ATTAtgaaaatagtatttcttttttgttagTATTCTTATTTTGTAATATA
AAATTGAATAATTAttatttctttagaaaaaaaaggtttttattaAAGTG
GAGG
Run BLAST on NCBI

protein sequence of TCONS_00004433-protein

>TCONS_00004433-protein ID=TCONS_00004433-protein|Name=TCONS_00004433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MSVNKIDAGKGRLTLQGDYVVHHEKNITFSLEGDRLPAVLKGTHSGDVFI
TNLRLIFVNNGKGYNTFSMDFQSIRNTEVKQPIFGSNHIKGYVKSEINGG
WEGSANFKIDFPKGGAIEFAERFQKTVKESLRHRQAGVAPPPPMQPTYGG
GYYPPQGPPPMMAGGGAPGYYPPPQPGYYQYQSSAPPAPGFQPNMAGPPP
QGGPAPPPYQTNAYQNNAAAGYNSGVNAKAQEAYMSGNTAYIPNDAPPPY
NPNYKKDD
Run BLAST on NCBI

transcript from alignment at sc0000044:782360..794959-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004433 ID=TCONS_00004433|Name=TCONS_00004433|organism=Clytia hemisphaerica|type=transcript|length=12600bp|location=Sequence derived from alignment at sc0000044:782360..794959- (Clytia hemisphaerica)
TTAAACCACAAATTAAAAACAAAAACATTGAGCAAATTGCTCGCGCATAC
AAATATTTTCCAAAAATTTTAGGTTCAAAATTTCAACAGCGAAAGAAAAG
AAGAAAGCAACCAACAAAACCTGGGAACTATGTCTGTCAATAAAATTGAT
GCTGGAAAGGGTCGTCTAACTCTTCAAGGAGACTAGTAAGAGCGCTCTAT
TTTCTTTCTTTCTTTGAGTCAAACTCATTAATGTCTGAATGAAAAGATGA
TGGTTTCTTCCGCCGTAAAAGTGGTTAAAAGTGGAAAGACACAATGTATT
TTTCAGATCAGGCATGGGGGAATAGTGTCAGGACCTACAGGTGTAGGGTT
GGGTATGGGTGTGATTATGTATCAGATTGGCTATGAATAGACGTTTTTTC
AAAGAGGACGTCCTGTTGAATAATAACAGGCGTAGTTAATCGATATAATC
GATAATCTTGAGTAATCGATAAATAAAGGACCGGACTGTCCGGTGTATTT
GTCTGGTGGCAAAAAATCCTTTCGCTACACCGGACGTAATAAGTCTGGTG
TCAGTCTGATGTTGCATACAGGGAATTTTGGACGCTGGCTGGACATTTAC
AAAACAAAAAAATTAAGAAACACCGGACGCACCGGACTGGTCATGTCCGA
TGTTTTGATTTTAAAAATATCCTTCTCCGACACTGGACATCCGACTTCCT
TAAGTCCGGTGTAGAGATTGTCCAGTGGTAAAAATAATTCTCATTTTACA
CCAGACTTTCGCATGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNAAAGATATAGTCAAATCTTGTAGGGTCATTTTTCAAAATTT
TTTTGCCAAATTCGATTTTCGCATTTCGCCATTTTACCCTACGCAAACGC
ACGTGATGTCCGGTGTTGGTTAAGTCTGGTGGGTTGGCAGCAGGCAGGGT
CCTATAAATAATCGATAAGTAATCGATGGATTAGATATCGATTAGATTAA
CCGATAGAATCGATAGGTAATCAGACCTTCAAAAAATCTTGAGTATCATG
ATTAGCGATCGATTATTTCCAAGCTATCGATTACTTATCGATCACATATC
GACTACATACCGTAAGTTGGTCTAATGTCGACATCTGTCTTCTAATTTCA
ACATCCTTCTTTATAGATAGGAATATTAAGAAGGTTGAAATCACTGATGG
ACTAAAGATTTGTCCTCTCATCACGCTAATCAAAGTCAATCAGCAATTCC
GACCTTCCTCAGTTTATACTGTTCCTATCTCTAAAGAAGGGTGTCGAAAT
TAGAAGACGGATGTCGACATTAGACCAACTTACGGTACAACCTATCGATT
ACTTATCAATCATGTATCGATTGTTAACAATCATCGATTACTTATCGCTC
ATGCATTGATTACTTATCAATTATTTACTTATCTTTGATCACGTATCGTT
ATCGATTATATATCGATCGTGACCGACTATTGACTACCGTGAGATGTCCT
AAAGCCGACAGCCCAGCCTAATTCCGACCCCCCAAATAACTGTCATAAAA
AAAAATTCTATGTTTACAAACATTCCCTCTTCAAGTTGAACGATAAACTA
TTGCTAGAACTCTTGAAACAAAACATCTAACAAGATAGCTGTAATGTCAA
GATGTCAATTAATGTAATTAAAAAGTGCGAGTTGTAAAAATAATTACCTT
TTATTCTGGATCAGACATATATTATCTTTACTAGAATAGGAGCAATGTGT
CATGTAATACATAATAATTGTAATATACAGTACGTCGTCTATATGTATTC
TTATCATGTAATATATAATATAATGTAATATACGTCGTCTATATGTATCC
TTACACAAAGTCCTAGCCCCGCAATCAAGCCAAGTGCCAGTGTAAAGTNN
NNNNNNNNNCTTCGTTGCGTCACAGCGAAAGGTTTGTTTTTATTTTAGTT
TGTATCTTTGAAAGACCCCATCGGCTTTAGGCTGGGCTGTCGGCTTTAGG
ACCTCTCACGGTACATTACCGGCCCTTTTTACGCCGACCCTTATTCCACC
AACGAGCTCAAAAATAACGCTAATAAGGTCCGGTGTAAAAAGGGCCAAGA
TAAGGTATTTAATGAAGTAAAGAAAATTCCTGGAATTCGCCAAATCTCAT
ACCGATCGTATTACTTTGAATAAACGCCCGCTTTGGAATTAATAATGCTC
CTCCAAAAAGGCAAACCATTCAATAACGCCCCTTCTCTAAATAAAATGGT
AACTTTGTTTTTTTTTAACCTTTTTTTGTTCAGCCTTTCAGAGGGTTTGA
GAATGCTTCAGCCGAAATTTACCATATGCTTATAAAAAAAATGAGTGTAG
TAGCTTTTCTAAGCCCTAACATCAAAACCATGATGAGAAAAACTGAGCGT
ACGATTACGATGATTACTTTAATCGTAGAAATTTTAGGGAGGCTAATTTT
AGCGTTTTAGCGAGTTTTCCTTATTTTCGCTAAAATAAATCTCGCTAGTA
AAACACTTACTTACTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNTTGCAATTCAATAGGGGTCCGATATTAGACCGAATT
TTCGATTTCTTTTTTGCATAGGTAAAGAAATATTTTGAATTCTTTTTAAT
TGAGTCAATCACTTTGCTTTCTACGTGATGCTTTGACTCATTAAAAGATT
TTTGAAGTTTTTTCTCAATTTGTAAAAGCATGCACGAATCAACAGATCAC
TAAAATTTATCCACGCGAAATTTCTGATTATATTCCCTTGATACATTTAA
TTATCAATACGAAGGGTTTCAGTGCAAAAAAATGCTAGAAAACGAATTCA
GTCAATAATGTAATACGAGTATTCGCTAAAATTTATTCACGCGAAATTTT
TCAACATGATATCCTGATTAGCAAAAGGTCTATTAATGTGTCAATATTGC
AGAGCGCCACTCTCTAAATGTAAATTTAAAGACACCCCAGCTCGATACTG
ATAAAAAGTTTTCTTATTGATTGAATCATATTTTTTTCAGTGTTGTTCAC
CATGAGAAAAATATTACATTCTCTTTGGAAGGAGATCGTTTACCAGCAGT
TTTGAAAGGAACACATTCTGGAGACGTTTTTATTACAAATCTTAGGGTAG
GAACTTGAAATATCAAAATTCCTTCTCAAAACGGTAGAGAGAACAACCAA
GCCAAAATGTTCCGATTTTTGAGAGGAAAACCCTTATTGAAACAAATTTA
TTTTAAATAAAAAGCAGGCTTAGGATTTATGAAAAGTTATGTGTGCTTAA
AAACAATGATTCCAATAAATATACACTCAGTATATAACCTTTTGGGAACT
GCATTTTTCAGAGACTTATACAATTTTTTCCTGTTTTTATAAAAGTTGCT
CTTTTTCAGCTTATTTTTGTCAACAATGGCAAAGGATATAATACTTTTTC
AATGGACTTCCAAAGTATTCGTAACACAGAGGTACGATTATATTTTGAAT
TGTCTGATCACGAGAATCCATTTTTTGCGCATGTAATAAATTCTGAGAAT
TCTGATTGCTCCTGATTTATTTTTGAAAAAAAGAGCTTCTTCAATCTCTT
AAAAAAAATTAATTTAAATATTTATCAGTGTTCATCATGAGAAAACAACT
TTTTATTTTCATTCAGGTCAAACAGCCCATCTTTGGAAGCAACCACATCA
AAGGATATGTAAAGTCTGAAATCAATGGTTTGTTTTTTTATACTTTGCCC
CAAAAGAGTATGGTTTAAACATTTTCACGAGTTTATTCACTTTCGAAAGT
GTTTCGATATCAATACATATGTTTAGAGATTGTTTAAGATTTTGAAAGGT
TCCATTCCCCAAAGTAGGTACCACTTGACCTGCATTGATATTAAATGTAT
TCTTAATTCTCTCTAATTCTGATCATCTTATTCAGGCGGTTGGGAAGGAA
GTGCCAATTTCAAAATTGATTTTCCTAAAGGTGGAGCAATCGAATTCGCT
GAACGGTTTCAAAAGACCGTCAAAGAATGTAAGAATTGCTTTGCTTTTCA
TTTAAAGTATGTGAGGTTAAACCATTGGTTTTCATTAATTTCAATCTTTT
AAAGATGTAGCAATTCTCTTTTTCACATACTTTCATAGGAGAATGTTTCA
GTTTGACAATATAAATTTGGGTCGAAACTTAATTAAATTATAAATCATGC
GAAACAAAACAAGCTTATGAACTTGCATTGAGCAGATTCTATATATATCA
TATTGTTCTCCCCTCTATTTTTCAGCATTACGACACCGACAAGCTGGTGT
TGCCCCTCCACCCCCTATGCAACCAACATATGGTGGAGGTTACTACCCAC
CTCAAGGACCCCCACCCATGATGGCTGGTGGTGGTGCACCAGGTTATTAC
CCACCTCCCCAACCTGGCTATTATCAATATCAATCAAGTGCACCACCTGC
TCCTGGTTTTCAACCCAATATGGCTGGCCCGCCACCACAAGGGGTAATTA
TCTCTATTATTTCGATGAAATCAAGCTCATCCCATCAATCAAATTAAAAG
ATTTAAATATCATAGGCTCGTTCAGCTGGCACCCGGGGGGCTTAGGCAGA
ACTATTATTTTTTCACCTTCTAAATTCGCTCTAAAGGCTCCTCTAATTTT
AAAGTAGTCTCTCTAAGGATTGGAAATGTTTCGAAATTGGACTATGGAGG
TATAAAGAAACAGGAAAAGTATGCTATTGTAACCAAGCTCGCCCTACGAT
TAAAAAAGTTACGATGTATGTATGCCCGTAAAATGCGTGTATACTTCCGT
CCATTCGATTTTTCACAATAAAAATGAAATGAAAATTGATTTTTTTCAAT
TATTTTAAATTTTTCATTTTTGTTTTTAAATTAAAAATTGAAAAAAGAAA
AATTGAGATTCAATTTTCAATTTTTAATTTTTTGTCCATGTGGGCGATAT
TTCTGTCATGATGATGTATCATTTAGATTAGACGGGGGTCTGAAATGGCA
ATGTTTGTTGCTTGCGCTTAGGCATCCTTTGTATAATATCTCTATCACAT
AAAACATTTTACACTGTTTTTTAATATTGTTTCCTTATCTCATCAAATAA
TAGTGATGATGTAACATCAATCATGCTTGGCTTTAAACGTAGCTTCTGCA
GATGGGTTCAACCTAAGTATAGTCCAAGATCCGTAAATCGCAATAGGTAT
ACTTACGCAATATAACATGCAGCAGAACAGAATTGGTGGAGTGATTCTGC
AAGACAACTGCCACGCTGGAGTAATCGTCTATTTGAAGGTCCTGAAGATG
CTGTAACAGGGCTGGGTGGTTCAGGAAGTTTACAAAGATTTCACCAAGTC
ACGGTGGAGAATAATCGCGACAGCTACAATTTGCTGTAAATCTTTAGAAC
TACTAAACCTAAAAAAAACCTACAAAAACCTTCCGTAGAATCTCCTTTCC
ATAATCCCCACACCGATCCGATCCGGTTGGAGATTCAAAGTAACAGATCT
TACTGCTAATTTGCCAAAAGCTTCGGTCTTGCATATCATTCCAGTTTGTC
AATAAGATCTTATATCATTAGATCATTAGATGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAATAA
TGTGATAAAGATGTTATAGGACAATATGTATAACATCTACAGCAGTCTGC
GACAAATCTATCAGCCTAGCTTCACTCTTGCCATGTTCAGACCCCCATCG
ACCCTAAATGATACATCATCATGACAGAAATGTCACCCATATGGACAAAA
AATTAAAAATTTGAAAATTGAATCTCAATTTTTCTTTTTCAATTTTTAAT
TTAAAAACAAAAATGAAAAATTGAAAATAATTGAAAAAAATCAATTTTCA
TTTCATTTTTATTGTGAAAAATCGAATGGACGGAAGTATACACGCATTCC
GTAATCTCATATATCGTGCATTTTTAATGAGCTTAATCTTATTGGCTCAT
TGAAGCTTTAAAAATTAGTTGAGACGAGATTCATTGTTTCTGACATCAGT
GTAAGGAAATATTTGGACTAAAAAAATGCCTGTAAACTTGGCAATCCCTC
GTCAAATAATAAGATTTTTCGATCAATGTTTTCTTTAAGGTGAAATCTAT
TGCTCTGAAATTGTGTGTGCTTATAAAGAATTTATCATTTTTTGGCTTGA
GAAAATATCTTTTCAAAACAAAATTGAATGGATAACGAAATGGAACATAA
ACTTGTGTCGTGGACGAAGTTTTATTTAATTTTCGTATATTATAAAAGGC
TAGAATCTTCAATACTGATTATTAGAATGTTCAGAGCAAACTTGAGTTCT
ACTAAAAAGTCTTATTTCATCGGGCGAACTTACAACTTCTTTTGATACAT
TTTATAAAAGAAATCAAAAGACTTTAACGACCAATTACCGACACATTCAA
CTCCTGTTTTTCTTTATACCTCCATGATTGGAAGAAAATTTTTAAAAAAT
GTGACTTTTCACTGAAAGTTGGTCTCTCTAAGGGTTGTTTTTGGGAGGTC
CCGTACATCTGCACATGGCTTATCTGCTGCCAACCTTAGTACCTTAACTG
GCACTAAAAGTTGAAATAATTTTTTTACAACTTTTAAATTTAGATGAACT
TTGAAATGAAATCGTGTGCCAACGATAACGTTTCGATTTTCTTGTCTTTG
TAAAATGATTCATTAGCTACGTTAGATTTTAAATTTCAATGGATGTTTTA
GAATAGAAACAGTGTATAATTCTAAATATTAATTTTCAGGGTCCTGCGCC
ACCGCCATACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGATATA
ATAGCGGTAAGACTTTTTTCCTCATCATTACAGTGCATTTCGTGGGTCTT
GAAAAACCCACCCTTGAGGGCGGCACAGCCTTGGGTCGGACCCCCTCCCG
GGAAATTAAATTGAGATGACATGCATGTCATCTAAACTCATTTTATGATG
AAGAAAATTACATTTCCCCGCCTGAAAAAACTCCAGTCGTATAAGAAATT
TGAAGAAAATTGTTTTGACAACTTAAACTAATCTTTTCTTGTTTGTTGTA
GGTGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATACTGCTTA
CATCCCGAACGTAAGAATCATAACTTTATAGTTTCGTCTGAGTTGGCTTG
ATATTTTTTTAAGATGGCTCACAATATCAATTTATATGAAAAAGAAGCCG
TTGCAAAATATTCGCTTGTTTTATTTCCGAATATTTTGAAAAATGATATG
ATAGATATGTAATAGTTATCGCATAGTATCGAATACAATATGCGATATAT
TTTCCAATTTTTAAGATGATTTTTCGTCATAATTTGATATAATTGGTTCA
TTTTCAGGATGCACCGCCACCGTATAATCCAAACTACAAGAAGGACGATT
AAGAACCTCATGAAACGTGTATCATATTTAGAATAAAATTTATCACAAAC
ATACTTTAAAAACGAGACGCTGGGTAAAGTTGTAGTTGTAACGTATGGCG
AAATCTAAGTAAAGATATTCATTGGGTTCCTTACTTGAGAAGAACATATA
ACAAGAAAATCAAAGAACAAATGAAAAATATGGTTATGTGCGTTTGTTTT
ATGAACTTATTCAAAGGACCTATCTTGCTTGAAAACTGGTTATTTGTAAA
AACTCACCGGGTGAAATTTATACATGAAATTTTTATTGTTTTTGTTTTTA
ATTTTAATTTTAAAAGAGCTTCATAAGATATGGCCCATTGAATAAATCTT
GACATATTGGGTTTTTTACCCTTAGGAGGCGAAAGACGTATATATACGTT
TTGAATAGGTCATTTTACCGATACACAGTCTTTTGGTCATAACTCCTGAC
CACTTGAGATTCAGAGAGAAAAAATCCGTNGGCCGTAGGGGGGGGGGCTA
AAAGGTCGAGCAGCAATTGGTACCTGATTTTTTACTGTGGCTAGGGGGGA
CTAACCATGTTAGGGGTCACCTATTTTTTCAGATAGACCTGGGGGCTAGA
TTCTATATTTGGTGATTAAATTAAGAGCAGCCTACCAGACCATAGGTTGG
CACTTTTTCATCTTATATTTTAATCTAAGCTCAAATTTTCAAAATTTCCC
CCATTGGGCCAAACCATGGTTGGCCCTCGCGGTGTCACCAAACTTCAGCC
CCCCTAATATGAAAAAAAAAATCTGTTATTTTTTGTAGCTGAGAGAAAGA
GCTTTCCAACGATACCAAAGTTGATACCTGAATCGTTTGTCCTGGTCGAG
AAATTGCCTTTGAAAGAATAAATTTCCAGAAAAATATGATGAACTTTTTA
ACCTTTTTCAAAAAAGTTAGCGGCTTAATAAAAAAGGTTAATAAAAATTT
TTTAAATCTTTAAAACTGGACCAAACTGTCCAAAATGACTATTGCTACTA
AGAGAAAGTAGATAAAGGCATTTTAAATGAAAAATGAAAAACAATTGAGT
CCATGTTAAGGGATGGCCCTGTTCAGAAATGGATCATGCCCTCAATCAAG
CTATTGACTCTCACAGAGTGCGAGTTAACTTATAATGAATAAATTTATTT
CTTGGGAAGTCGAGAATCTTTCTAATTTACTATCTTGTGTATCATAATTA
TGAAAATAGTATTTCTTTTTTGTTAGTATTCTTATTTTGTAATATAAAAT
TGAATAATTATTATTTCTTTAGAAAAAAAAGGTTTTTATTAAAGTGGAGG

Coding sequence (CDS) from alignment at sc0000044:782360..794959-

>TCONS_00004433 ID=TCONS_00004433|Name=TCONS_00004433|organism=Clytia hemisphaerica|type=CDS|length=6993bp|location=Sequence derived from alignment at sc0000044:782360..794959- (Clytia hemisphaerica)
GATGCACCGCCACCGTATAATCCAAACTACAAGAAGGACGATTAAGTGTC
AACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATACTGCTTACATCCC
GAACGGTCCTGCGCCACCGCCATACCAAACAAATGCTTATCAAAATAACG
CCGCTGCTGGATATAATAGCGCATTACGACACCGACAAGCTGGTGTTGCC
CCTCCACCCCCTATGCAACCAACATATGGTGGAGGTTACTACCCACCTCA
AGGACCCCCACCCATGATGGCTGGTGGTGGTGCACCAGGTTATTACCCAC
CTCCCCAACCTGGCTATTATCAATATCAATCAAGTGCACCACCTGCTCCT
GGTTTTCAACCCAATATGGCTGGCCCGCCACCACAAGGGGCGGTTGGGAA
GGAAGTGCCAATTTCAAAATTGATTTTCCTAAAGGTGGAGCAATCGAATT
CGCTGAACGGTTTCAAAAGACCGTCAAAGAATGTCAAACAGCCCATCTTT
GGAAGCAACCACATCAAAGGATATGTAAAGTCTGAAATCAATGCTTATTT
TTGTCAACAATGGCAAAGGATATAATACTTTTTCAATGGACTTCCAAAGT
ATTCGTAACACAGAGTGTTGTTCACCATGAGAAAAATATTACATTCTCTT
TGGAAGGAGATCGTTTACCAGCAGTTTTGAAAGGAACACATTCTGGAGAC
GTTTTTATTACAAATCTTAGGATGTCTGTCAATAAAATTGATGCTGGAAA
GGGTCGTCTAACTCTTCAAGGAGACTAGATGCACCGCCACCGTATAATCC
AAACTACAAGAAGGACGATTAAGTGTCAACGCGAAAGCTCAGGAAGCCTA
CATGAGTGGAAATACTGCTTACATCCCGAACGGTCCTGCGCCACCGCCAT
ACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGATATAATAGCGCA
TTACGACACCGACAAGCTGGTGTTGCCCCTCCACCCCCTATGCAACCAAC
ATATGGTGGAGGTTACTACCCACCTCAAGGACCCCCACCCATGATGGCTG
GTGGTGGTGCACCAGGTTATTACCCACCTCCCCAACCTGGCTATTATCAA
TATCAATCAAGTGCACCACCTGCTCCTGGTTTTCAACCCAATATGGCTGG
CCCGCCACCACAAGGGGCGGTTGGGAAGGAAGTGCCAATTTCAAAATTGA
TTTTCCTAAAGGTGGAGCAATCGAATTCGCTGAACGGTTTCAAAAGACCG
TCAAAGAATGTCAAACAGCCCATCTTTGGAAGCAACCACATCAAAGGATA
TGTAAAGTCTGAAATCAATGCTTATTTTTGTCAACAATGGCAAAGGATAT
AATACTTTTTCAATGGACTTCCAAAGTATTCGTAACACAGAGTGTTGTTC
ACCATGAGAAAAATATTACATTCTCTTTGGAAGGAGATCGTTTACCAGCA
GTTTTGAAAGGAACACATTCTGGAGACGTTTTTATTACAAATCTTAGGAT
GTCTGTCAATAAAATTGATGCTGGAAAGGGTCGTCTAACTCTTCAAGGAG
ACTAGATGCACCGCCACCGTATAATCCAAACTACAAGAAGGACGATTAAG
TGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATACTGCTTACA
TCCCGAACGGTCCTGCGCCACCGCCATACCAAACAAATGCTTATCAAAAT
AACGCCGCTGCTGGATATAATAGCGCATTACGACACCGACAAGCTGGTGT
TGCCCCTCCACCCCCTATGCAACCAACATATGGTGGAGGTTACTACCCAC
CTCAAGGACCCCCACCCATGATGGCTGGTGGTGGTGCACCAGGTTATTAC
CCACCTCCCCAACCTGGCTATTATCAATATCAATCAAGTGCACCACCTGC
TCCTGGTTTTCAACCCAATATGGCTGGCCCGCCACCACAAGGGGCGGTTG
GGAAGGAAGTGCCAATTTCAAAATTGATTTTCCTAAAGGTGGAGCAATCG
AATTCGCTGAACGGTTTCAAAAGACCGTCAAAGAATGTCAAACAGCCCAT
CTTTGGAAGCAACCACATCAAAGGATATGTAAAGTCTGAAATCAATGCTT
ATTTTTGTCAACAATGGCAAAGGATATAATACTTTTTCAATGGACTTCCA
AAGTATTCGTAACACAGAGTGTTGTTCACCATGAGAAAAATATTACATTC
TCTTTGGAAGGAGATCGTTTACCAGCAGTTTTGAAAGGAACACATTCTGG
AGACGTTTTTATTACAAATCTTAGGATGTCTGTCAATAAAATTGATGCTG
GAAAGGGTCGTCTAACTCTTCAAGGAGACTAGATGCACCGCCACCGTATA
ATCCAAACTACAAGAAGGACGATTAAGTGTCAACGCGAAAGCTCAGGAAG
CCTACATGAGTGGAAATACTGCTTACATCCCGAACGGTCCTGCGCCACCG
CCATACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGATATAATAG
CGCATTACGACACCGACAAGCTGGTGTTGCCCCTCCACCCCCTATGCAAC
CAACATATGGTGGAGGTTACTACCCACCTCAAGGACCCCCACCCATGATG
GCTGGTGGTGGTGCACCAGGTTATTACCCACCTCCCCAACCTGGCTATTA
TCAATATCAATCAAGTGCACCACCTGCTCCTGGTTTTCAACCCAATATGG
CTGGCCCGCCACCACAAGGGGCGGTTGGGAAGGAAGTGCCAATTTCAAAA
TTGATTTTCCTAAAGGTGGAGCAATCGAATTCGCTGAACGGTTTCAAAAG
ACCGTCAAAGAATGTCAAACAGCCCATCTTTGGAAGCAACCACATCAAAG
GATATGTAAAGTCTGAAATCAATGCTTATTTTTGTCAACAATGGCAAAGG
ATATAATACTTTTTCAATGGACTTCCAAAGTATTCGTAACACAGAGTGTT
GTTCACCATGAGAAAAATATTACATTCTCTTTGGAAGGAGATCGTTTACC
AGCAGTTTTGAAAGGAACACATTCTGGAGACGTTTTTATTACAAATCTTA
GGATGTCTGTCAATAAAATTGATGCTGGAAAGGGTCGTCTAACTCTTCAA
GGAGACTAGATGCACCGCCACCGTATAATCCAAACTACAAGAAGGACGAT
TAAGTGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATACTGCT
TACATCCCGAACGGTCCTGCGCCACCGCCATACCAAACAAATGCTTATCA
AAATAACGCCGCTGCTGGATATAATAGCGCATTACGACACCGACAAGCTG
GTGTTGCCCCTCCACCCCCTATGCAACCAACATATGGTGGAGGTTACTAC
CCACCTCAAGGACCCCCACCCATGATGGCTGGTGGTGGTGCACCAGGTTA
TTACCCACCTCCCCAACCTGGCTATTATCAATATCAATCAAGTGCACCAC
CTGCTCCTGGTTTTCAACCCAATATGGCTGGCCCGCCACCACAAGGGGCG
GTTGGGAAGGAAGTGCCAATTTCAAAATTGATTTTCCTAAAGGTGGAGCA
ATCGAATTCGCTGAACGGTTTCAAAAGACCGTCAAAGAATGTCAAACAGC
CCATCTTTGGAAGCAACCACATCAAAGGATATGTAAAGTCTGAAATCAAT
GCTTATTTTTGTCAACAATGGCAAAGGATATAATACTTTTTCAATGGACT
TCCAAAGTATTCGTAACACAGAGTGTTGTTCACCATGAGAAAAATATTAC
ATTCTCTTTGGAAGGAGATCGTTTACCAGCAGTTTTGAAAGGAACACATT
CTGGAGACGTTTTTATTACAAATCTTAGGATGTCTGTCAATAAAATTGAT
GCTGGAAAGGGTCGTCTAACTCTTCAAGGAGACTAGATGCACCGCCACCG
TATAATCCAAACTACAAGAAGGACGATTAAGTGTCAACGCGAAAGCTCAG
GAAGCCTACATGAGTGGAAATACTGCTTACATCCCGAACGGTCCTGCGCC
ACCGCCATACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGATATA
ATAGCGCATTACGACACCGACAAGCTGGTGTTGCCCCTCCACCCCCTATG
CAACCAACATATGGTGGAGGTTACTACCCACCTCAAGGACCCCCACCCAT
GATGGCTGGTGGTGGTGCACCAGGTTATTACCCACCTCCCCAACCTGGCT
ATTATCAATATCAATCAAGTGCACCACCTGCTCCTGGTTTTCAACCCAAT
ATGGCTGGCCCGCCACCACAAGGGGCGGTTGGGAAGGAAGTGCCAATTTC
AAAATTGATTTTCCTAAAGGTGGAGCAATCGAATTCGCTGAACGGTTTCA
AAAGACCGTCAAAGAATGTCAAACAGCCCATCTTTGGAAGCAACCACATC
AAAGGATATGTAAAGTCTGAAATCAATGCTTATTTTTGTCAACAATGGCA
AAGGATATAATACTTTTTCAATGGACTTCCAAAGTATTCGTAACACAGAG
TGTTGTTCACCATGAGAAAAATATTACATTCTCTTTGGAAGGAGATCGTT
TACCAGCAGTTTTGAAAGGAACACATTCTGGAGACGTTTTTATTACAAAT
CTTAGGATGTCTGTCAATAAAATTGATGCTGGAAAGGGTCGTCTAACTCT
TCAAGGAGACTAGATGCACCGCCACCGTATAATCCAAACTACAAGAAGGA
CGATTAAGTGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAAATAC
TGCTTACATCCCGAACGGTCCTGCGCCACCGCCATACCAAACAAATGCTT
ATCAAAATAACGCCGCTGCTGGATATAATAGCGCATTACGACACCGACAA
GCTGGTGTTGCCCCTCCACCCCCTATGCAACCAACATATGGTGGAGGTTA
CTACCCACCTCAAGGACCCCCACCCATGATGGCTGGTGGTGGTGCACCAG
GTTATTACCCACCTCCCCAACCTGGCTATTATCAATATCAATCAAGTGCA
CCACCTGCTCCTGGTTTTCAACCCAATATGGCTGGCCCGCCACCACAAGG
GGCGGTTGGGAAGGAAGTGCCAATTTCAAAATTGATTTTCCTAAAGGTGG
AGCAATCGAATTCGCTGAACGGTTTCAAAAGACCGTCAAAGAATGTCAAA
CAGCCCATCTTTGGAAGCAACCACATCAAAGGATATGTAAAGTCTGAAAT
CAATGCTTATTTTTGTCAACAATGGCAAAGGATATAATACTTTTTCAATG
GACTTCCAAAGTATTCGTAACACAGAGTGTTGTTCACCATGAGAAAAATA
TTACATTCTCTTTGGAAGGAGATCGTTTACCAGCAGTTTTGAAAGGAACA
CATTCTGGAGACGTTTTTATTACAAATCTTAGGATGTCTGTCAATAAAAT
TGATGCTGGAAAGGGTCGTCTAACTCTTCAAGGAGACTAGATGCACCGCC
ACCGTATAATCCAAACTACAAGAAGGACGATTAAGTGTCAACGCGAAAGC
TCAGGAAGCCTACATGAGTGGAAATACTGCTTACATCCCGAACGGTCCTG
CGCCACCGCCATACCAAACAAATGCTTATCAAAATAACGCCGCTGCTGGA
TATAATAGCGCATTACGACACCGACAAGCTGGTGTTGCCCCTCCACCCCC
TATGCAACCAACATATGGTGGAGGTTACTACCCACCTCAAGGACCCCCAC
CCATGATGGCTGGTGGTGGTGCACCAGGTTATTACCCACCTCCCCAACCT
GGCTATTATCAATATCAATCAAGTGCACCACCTGCTCCTGGTTTTCAACC
CAATATGGCTGGCCCGCCACCACAAGGGGCGGTTGGGAAGGAAGTGCCAA
TTTCAAAATTGATTTTCCTAAAGGTGGAGCAATCGAATTCGCTGAACGGT
TTCAAAAGACCGTCAAAGAATGTCAAACAGCCCATCTTTGGAAGCAACCA
CATCAAAGGATATGTAAAGTCTGAAATCAATGCTTATTTTTGTCAACAAT
GGCAAAGGATATAATACTTTTTCAATGGACTTCCAAAGTATTCGTAACAC
AGAGTGTTGTTCACCATGAGAAAAATATTACATTCTCTTTGGAAGGAGAT
CGTTTACCAGCAGTTTTGAAAGGAACACATTCTGGAGACGTTTTTATTAC
AAATCTTAGGATGTCTGTCAATAAAATTGATGCTGGAAAGGGTCGTCTAA
CTCTTCAAGGAGACTAGATGCACCGCCACCGTATAATCCAAACTACAAGA
AGGACGATTAAGTGTCAACGCGAAAGCTCAGGAAGCCTACATGAGTGGAA
ATACTGCTTACATCCCGAACGGTCCTGCGCCACCGCCATACCAAACAAAT
GCTTATCAAAATAACGCCGCTGCTGGATATAATAGCGCATTACGACACCG
ACAAGCTGGTGTTGCCCCTCCACCCCCTATGCAACCAACATATGGTGGAG
GTTACTACCCACCTCAAGGACCCCCACCCATGATGGCTGGTGGTGGTGCA
CCAGGTTATTACCCACCTCCCCAACCTGGCTATTATCAATATCAATCAAG
TGCACCACCTGCTCCTGGTTTTCAACCCAATATGGCTGGCCCGCCACCAC
AAGGGGCGGTTGGGAAGGAAGTGCCAATTTCAAAATTGATTTTCCTAAAG
GTGGAGCAATCGAATTCGCTGAACGGTTTCAAAAGACCGTCAAAGAATGT
CAAACAGCCCATCTTTGGAAGCAACCACATCAAAGGATATGTAAAGTCTG
AAATCAATGCTTATTTTTGTCAACAATGGCAAAGGATATAATACTTTTTC
AATGGACTTCCAAAGTATTCGTAACACAGAGTGTTGTTCACCATGAGAAA
AATATTACATTCTCTTTGGAAGGAGATCGTTTACCAGCAGTTTTGAAAGG
AACACATTCTGGAGACGTTTTTATTACAAATCTTAGGATGTCTGTCAATA
AAATTGATGCTGGAAAGGGTCGTCTAACTCTTCAAGGAGACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002481XLOC_002481Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004433-exon-sc0000044-1575043694:794775..794959TCONS_00004433-exon-sc0000044-1575043694:794775..794959Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:788064..788169TCONS_00004433-exon-sc0000044-1575043694:788064..788169Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:787729..787800TCONS_00004433-exon-sc0000044-1575043694:787729..787800Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:787483..787543TCONS_00004433-exon-sc0000044-1575043694:787483..787543Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:787182..787274TCONS_00004433-exon-sc0000044-1575043694:787182..787274Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:786717..786934TCONS_00004433-exon-sc0000044-1575043694:786717..786934Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:784254..784320TCONS_00004433-exon-sc0000044-1575043694:784254..784320Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:783950..784008TCONS_00004433-exon-sc0000044-1575043694:783950..784008Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1575043694:782360..783702TCONS_00004433-exon-sc0000044-1575043694:782360..783702Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:794775..794959TCONS_00004433-exon-sc0000044-1510915933:794775..794959Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:788064..788169TCONS_00004433-exon-sc0000044-1510915933:788064..788169Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:787729..787800TCONS_00004433-exon-sc0000044-1510915933:787729..787800Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:787483..787543TCONS_00004433-exon-sc0000044-1510915933:787483..787543Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:787182..787274TCONS_00004433-exon-sc0000044-1510915933:787182..787274Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:786717..786934TCONS_00004433-exon-sc0000044-1510915933:786717..786934Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:784254..784320TCONS_00004433-exon-sc0000044-1510915933:784254..784320Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:783950..784008TCONS_00004433-exon-sc0000044-1510915933:783950..784008Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1510915933:782360..783702TCONS_00004433-exon-sc0000044-1510915933:782360..783702Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:794775..794959TCONS_00004433-exon-sc0000044-1491911889:794775..794959Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:788064..788169TCONS_00004433-exon-sc0000044-1491911889:788064..788169Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:787729..787800TCONS_00004433-exon-sc0000044-1491911889:787729..787800Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:787483..787543TCONS_00004433-exon-sc0000044-1491911889:787483..787543Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:787182..787274TCONS_00004433-exon-sc0000044-1491911889:787182..787274Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:786717..786934TCONS_00004433-exon-sc0000044-1491911889:786717..786934Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:784254..784320TCONS_00004433-exon-sc0000044-1491911889:784254..784320Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:783950..784008TCONS_00004433-exon-sc0000044-1491911889:783950..784008Clytia hemisphaericaexon
TCONS_00004433-exon-sc0000044-1491911889:782360..783702TCONS_00004433-exon-sc0000044-1491911889:782360..783702Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004433-proteinTCONS_00004433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:782360..794959 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.6999	57.9332	98.2988	107.647	59.2684	43.4518	50.151	55.3382	55.7475	52.5713	84.2213	54.1084	53.6154	49.6024	37.191	42.0091	41.5029	45.1739	58.183	74.0874	62.248	63.4037	43.0976	52.0017	70.9242	81.7343	83.5645	80.8361	64.3807	56.2584
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
IPR011993PH_dom-like
Blast
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BLAST of TCONS_00004433 vs. Swiss-Prot (Human)
Match: WBP2 (WW domain-binding protein 2 OS=Homo sapiens GN=WBP2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.051e-23
Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:  235 LPAVLKGTHSGDVFITNLRLIFVNNGK-GYNTFSMDFQSIRNTEVKQPIFGSNHIKGYVKSEINGGWEGSANFKIDFPKGGAIEFAERFQKTVKESLR 525
            +P   KGT  G V++T  R+IF++ GK    +F M F  +++ E+KQP+FG+N+IKG VK+E  GGWEGSA++K+ F  GGAIEF +R  +   ++ R
Sbjct:   38 VPEAFKGTKKGTVYLTPYRVIFLSKGKDAMQSFMMPFYLMKDCEIKQPVFGANYIKGTVKAEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQASR 135
The following BLAST results are available for this feature:
BLAST of TCONS_00004433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WBP22.051e-2345.92WW domain-binding protein 2 OS=Homo sapiens GN=WBP... [more]
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