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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004359 ID=TCONS_00004359|Name=TCONS_00004359|organism=Clytia hemisphaerica|type=transcript|length=916bp
CTTTGTAataacataaaaaaatatttccaatatatacaataaaaataatt
tatctgATGGGGCTCCTTTCCTTATTTATGATTTGTTGCACCTGTGAGAA
TATGATAgtaattttgaccaaagttttGACCCATCGCCCGAGAGAAAGCG
TGACAAAAAAAAACCATTTCTTTATTATATCAATTATATCTATCAATGCA
AGTCCACTACCTAAAAATCAAAGAATatcctaaaaaaatattatggAAGG
CAAACAAAATAACTAAATTATTGTTCTTTTTAAGAACAAGCCATACAAGG
CTTCTATGGCCAAAATTTTGAGAACAACTtaaggctttgtggactttaTT
TGGGACATTAACCCACACTATGGCgaaaaaaagaacatgttaagaacatt
tttaagcttctaaaaactcaaaaagctcagaacatccgaaggcttcaata
attttataaaataataaaataaaataatttcgatTGAGTTtagattttct
cttttttggcaTACTTCTGACAGACATACATTTTGCTTTTAAGCGCATGA
AAATCATCTCTCGGTACAACCAGAGTTAAccatctcaaaatttattttaa
aacttttccaaCAACATTTCTTTAAAGGTTTTCAACTTTCGTTAACATTC
CAACTGACGATAAAGGTAGCAATCCATTCCCTTATGAGAAGGTAAGGAAC
ACTGTTTAGTAAGCATATAATTTAGTTCGATTGACATCTTTTTCTTTGCA
CTCTCTGGCTTTACTGTAATAATAAAATGTTCCATCTTTCCGTTGAAGTT
TCTTCACGTACCCCGTATCTGGCCAACGgtcaacctaaaaaaagttgacg
AGAGAACAAATTAATTTAAGGGGCAACGCTCTGGACAGTGGTGGAGGGGC
CAAAAAtgtatagtga Run BLAST on NCBI transcript from alignment at sc0000044:194630..195783+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004359 ID=TCONS_00004359|Name=TCONS_00004359|organism=Clytia hemisphaerica|type=transcript|length=1154bp|location=Sequence derived from alignment at sc0000044:194630..195783+ (Clytia hemisphaerica)
CTTTGTAataacataaaaaaatatttccaatatatacaataaaaataatt
tatctgATGGGGCTCCTTTCCTTATTTATGATTTGTTGCACCTGTGAGAA
TATGATAgtaattttgaccaaagttttGACCCATCGCCCGAGAGAAAGCG
TGACAAAAAAAAACCATTTCTTTATTATATCAATTATATCTATCAATGCA
AGTCCACTACCTAAAAATCAAAGAATatcctaaaaaaatattatggAAGG
CAAACAAAATAACTAAATTATTGTTCTTTTTAAGAACAAGCCATACAAGG
CTTCTATGGCCAAAATTTTGAGAACAACTtaaggccggtttccacttgcg
cgcgctacgATCGCACTTttgggcttcaatcctttttgcttggaaaaaag
attacgtcataaaaatgaagCNaaaaaaagttgaacacatttcaactttt
ttcaaccgttacgtcagttcgcgccaatggagttgcttcatttttctttt
gaccaatagcgtggaagctttgttcGAAAAAgcgcgatcgaagcgcgcgc
aagtggagaccggcctttaaggctttgtggactttaTTTGGGACATTAAC
CCACACTATGGCgaaaaaaagaacatgttaagaacatttttaagcttcta
aaaactcaaaaagctcagaacatccgaaggcttcaataattttataaaat
aataaaataaaataatttcgatTGAGTTtagattttctcttttttggcaT
ACTTCTGACAGACATACATTTTGCTTTTAAGCGCATGAAAATCATCTCTC
GGTACAACCAGAGTTAAccatctcaaaatttattttaaaacttttccaaC
AACATTTCTTTAAAGGTTTTCAACTTTCGTTAACATTCCAACTGACGATA
AAGGTAGCAATCCATTCCCTTATGAGAAGGTAAGGAACACTGTTTAGTAA
GCATATAATTTAGTTCGATTGACATCTTTTTCTTTGCACTCTCTGGCTTT
ACTGTAATAATAAAATGTTCCATCTTTCCGTTGAAGTTTCTTCACGTACC
CCGTATCTGGCCAACGgtcaacctaaaaaaagttgacgAGAGAACAAATT
AATTTAAGGGGCAACGCTCTGGACAGTGGTGGAGGGGCCAAAAAtgtata
gtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004359-exon-sc0000044-1491911889:194630..194962 | TCONS_00004359-exon-sc0000044-1491911889:194630..194962 | Clytia hemisphaerica | exon |
| TCONS_00004359-exon-sc0000044-1510915933:194630..194962 | TCONS_00004359-exon-sc0000044-1510915933:194630..194962 | Clytia hemisphaerica | exon |
| TCONS_00004359-exon-sc0000044-1575043694:194630..194962 | TCONS_00004359-exon-sc0000044-1575043694:194630..194962 | Clytia hemisphaerica | exon |
| TCONS_00004359-exon-sc0000044-1491911889:195201..195783 | TCONS_00004359-exon-sc0000044-1491911889:195201..195783 | Clytia hemisphaerica | exon |
| TCONS_00004359-exon-sc0000044-1510915933:195201..195783 | TCONS_00004359-exon-sc0000044-1510915933:195201..195783 | Clytia hemisphaerica | exon |
| TCONS_00004359-exon-sc0000044-1575043694:195201..195783 | TCONS_00004359-exon-sc0000044-1575043694:195201..195783 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:194630..195783 + |
Blast
The following BLAST results are available for this feature:
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