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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004329 ID=TCONS_00004329|Name=TCONS_00004329|organism=Clytia hemisphaerica|type=transcript|length=1325bp
gtcatttttcagtaCAAAACCAAtagaaaatgatttcaaaaagacttcaa
aaataaatttaaaccgGTTCATTAGAAAGACCTGAAAGAGTAGATAACGA
AAATTGGGCTATTTGCCAATTTATAACTCCAAAGGGACCtctttgccaaa
tttcagccacatACTATTTTTTCAAGGTAAAACCCAATTCCCACATACTA
ATTTCCTTATCAACTTGTTCGTATACGACTTTCTGACTTAACAAATAAGT
GGcttgattttcttttccttttttaggTCATTTTCAAAGCTTATTCATCA
AAACGAGAAATTATTTCAATCATCAACCTTCGTAACGTTAATTTGTAACT
CGACATTTGCTGATTCGTTATCATGCTGTTACCTGTTACCTTTTTGTTAT
TTGTTCCACCATTTCCCTTGATGTCCTGGTGTATGTGTCGATTCAAATCA
GTTTCTTATATTGCCTACACGATTGCTGTATTTCTATCTACAACGAATGA
CCAATAATTTAGATTCAACAAAACCTGAACGTTATAAATGATGCAATGGT
GCTGACTTCTGACTTACATGTTGCTAACACAATGTCGCTTATTTTCCTGG
TTGTAAACTGGTGTTCCTGGTCGTTTAATTGTTTTAACTGAAATTTCATA
CCATACAACGTGGTCTTTGGAAATTGAATTGTGTAGAGACGGACTATTTT
TAAAGCAGGAAGCATATTTTTATAAAGAGTTCTTAGTATTTTAAAGACTT
TAAACGATAATATTTTTACACGATGAATAAGAATCTTATTACAATACATC
TTATACAGTCCTActtgcaatttcttttttccactCTTCTATTACACTCA
Gtcttaaaacaacaaaaaagaaatctttattttccagaaaaatttgtcct
ataaatcctacctaagtttACCCTGATTGCGTATATTGTGAAACGTTCTT
CTCAAACCTAATTATTCCAAAGTAATCTTGAGGTTGAGTCAGAATATACT
CCTCAGTTGTCACGTCCTACCGCCGGGCTTTAAGGATGACAGCCAAGAAA
AGGACTTTACATCTAATTTCAACTTTAGACATAATGTTGTTTTAAAAGGC
TTTTATCGTCGTAACTAAATGTTACTCATCAAATTATAATGGCTGGCAAT
AAATGTTTAACTCCAGCGGTTTCGGGGCATTTATAGCTTCAGCTAACTgc
tagttttattttttttattttacttatttatttattttttacatagtcta
gtacctctggcgatataacgttagttcctagcggggggagggactatatt
ttatgtttaagtaatgttttttgta Run BLAST on NCBI transcript from alignment at sc0000041:419851..421175 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004329 ID=TCONS_00004329|Name=TCONS_00004329|organism=Clytia hemisphaerica|type=transcript|length=1325bp|location=Sequence derived from alignment at sc0000041:419851..421175 (Clytia hemisphaerica)
tacaaaaaacattacttaaacataaaatatagtccctccccccgctagga
actaacgttatatcgccagaggtactagactatgtaaaaaataaataaat
aagtaaaataaaaaaaataaaactagcAGTTAGCTGAAGCTATAAATGCC
CCGAAACCGCTGGAGTTAAACATTTATTGCCAGCCATTATAATTTGATGA
GTAACATTTAGTTACGACGATAAAAGCCTTTTAAAACAACATTATGTCTA
AAGTTGAAATTAGATGTAAAGTCCTTTTCTTGGCTGTCATCCTTAAAGCC
CGGCGGTAGGACGTGACAACTGAGGAGTATATTCTGACTCAACCTCAAGA
TTACTTTGGAATAATTAGGTTTGAGAAGAACGTTTCACAATATACGCAAT
CAGGGTaaacttaggtaggatttataggacaaatttttctggaaaataaa
gatttcttttttgttgttttaagaCTGAGTGTAATAGAAGagtggaaaaa
agaaattgcaagTAGGACTGTATAAGATGTATTGTAATAAGATTCTTATT
CATCGTGTAAAAATATTATCGTTTAAAGTCTTTAAAATACTAAGAACTCT
TTATAAAAATATGCTTCCTGCTTTAAAAATAGTCCGTCTCTACACAATTC
AATTTCCAAAGACCACGTTGTATGGTATGAAATTTCAGTTAAAACAATTA
AACGACCAGGAACACCAGTTTACAACCAGGAAAATAAGCGACATTGTGTT
AGCAACATGTAAGTCAGAAGTCAGCACCATTGCATCATTTATAACGTTCA
GGTTTTGTTGAATCTAAATTATTGGTCATTCGTTGTAGATAGAAATACAG
CAATCGTGTAGGCAATATAAGAAACTGATTTGAATCGACACATACACCAG
GACATCAAGGGAAATGGTGGAACAAATAACAAAAAGGTAACAGGTAACAG
CATGATAACGAATCAGCAAATGTCGAGTTACAAATTAACGTTACGAAGGT
TGATGATTGAAATAATTTCTCGTTTTGATGAATAAGCTTTGAAAATGAcc
taaaaaaggaaaagaaaatcaagCCACTTATTTGTTAAGTCAGAAAGTCG
TATACGAACAAGTTGATAAGGAAATTAGTATGTGGGAATTGGGTTTTACC
TTGAAAAAATAGTatgtggctgaaatttggcaaagaGGTCCCTTTGGAGT
TATAAATTGGCAAATAGCCCAATTTTCGTTATCTACTCTTTCAGGTCTTT
CTAATGAACcggtttaaatttatttttgaagtctttttgaaatcattttc
taTTGGTTTTGtactgaaaaatgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004329-exon-sc0000041-1491911889:419851..421175 | TCONS_00004329-exon-sc0000041-1491911889:419851..421175 | Clytia hemisphaerica | exon |
| TCONS_00004329-exon-sc0000041-1510915933:419851..421175 | TCONS_00004329-exon-sc0000041-1510915933:419851..421175 | Clytia hemisphaerica | exon |
| TCONS_00004329-exon-sc0000041-1575043694:419851..421175 | TCONS_00004329-exon-sc0000041-1575043694:419851..421175 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041 | supercontig | sc0000041:419851..421175 . |
Blast
The following BLAST results are available for this feature:
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