TCONS_00004327 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004327
Unique NameTCONS_00004327
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004327 ID=TCONS_00004327|Name=TCONS_00004327|organism=Clytia hemisphaerica|type=transcript|length=158bp
CTACATCAGAGCTAGCCAATTGTAGATCCCCTATAAACATGTTGTATCCT
TGTAATATGATTCTTGTTTTTTGTAAgatgatgttttgaaaaatgataca
ATCTATCTTGGCTTGTATTTTGACTGTTATAAACTTTCAGTATCAATAAA
CGGGAGGT
Run BLAST on NCBI

transcript from alignment at sc0000041:383547..383704

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004327 ID=TCONS_00004327|Name=TCONS_00004327|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at sc0000041:383547..383704 (Clytia hemisphaerica)
ACCTCCCGTTTATTGATACTGAAAGTTTATAACAGTCAAAATACAAGCCA
AGATAGATtgtatcatttttcaaaacatcatcTTACAAAAAACAAGAATC
ATATTACAAGGATACAACATGTTTATAGGGGATCTACAATTGGCTAGCTC
TGATGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002407XLOC_002407Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004327-exon-sc0000041-1491911889:383547..383704TCONS_00004327-exon-sc0000041-1491911889:383547..383704Clytia hemisphaericaexon
TCONS_00004327-exon-sc0000041-1510915933:383547..383704TCONS_00004327-exon-sc0000041-1510915933:383547..383704Clytia hemisphaericaexon
TCONS_00004327-exon-sc0000041-1575043694:383547..383704TCONS_00004327-exon-sc0000041-1575043694:383547..383704Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:383547..383704 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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