TCONS_00004144 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004144
Unique NameTCONS_00004144
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004144 ID=TCONS_00004144|Name=TCONS_00004144|organism=Clytia hemisphaerica|type=transcript|length=5151bp
AAGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATtTGTTCTTT
TGGTTGTGGTTTGTGTGGAGCATGCGTATTGCGTTAAAACATTCCACGAT
GAAGAACTGCATTCGAAAATCCCGCTTCGTTTGAAACGTGAAATCGAAGA
ACTTGTTCACAAACAACTTCATCAAACCATCTCATTGCATTACAAtacaa
atgatgacgtcatcagcttgTCACGTGATCCGATTATCAAAACGAATTTT
CACCATCGAGCAAGAAGAGATTTAGGTGACGGTATTGCTGGCAATGAAAC
AGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTG
GCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAAT
GAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGG
TTCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGA
CAGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTT
GGCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTC
GTCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGA
TAAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAA
GCACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCT
TGCAGTTCATTATCTTACAGAAGTACACCATACTTTTACGAATGGAACCA
TGTTGGATTAACCATCGTCCCTAGCGACAACTTGATAACATATGGTGCTG
AAGATGTAGAATCGTTTCATATCCATGGCAACGCTTTTGTAGCAGTTGCT
AACCACATCAACGATCAACGACAATATCATTTGGATTCTGaaatttatgt
ttttgattTGGCTAAACGACAATTTCGAAGTTTCCAAAAATTACGAACAG
ATGGTGCAATTGATTTGGAGTTTTTCGTGATTGGTCGAGGCATAACACGT
GAATATTTCCTCGCGGTTGCAAACCATGTCAAGGTTGTCCCTGGGCTCGG
CAAAACGCACGAGGTTGACTCTATCATCTACAAATGGAACTGGAATTTGT
TTGTTCCTTTTCAATGTATTAAAACGAACGGTGCCAAGAAATGGACTGCT
GTTACTGGTCAAAATGGCGAGTTCATATTAACACACACCAATATGCATGG
AAACGTCACCTTCTACAGTTACGATGGTTGGAGATTTTACTTGACCAAGA
AGCAGCCACAAGATCAGATCTTTCAACATTCTGCAACTACAACCTCCATC
TCTATCAACACTCCTTCCTTCTCCACTAAGATGTTGGCAATACAACCAAA
ACCAGAGTTTGTTGATGACGTCAATAACATCTACTCTTTCCAATTCAAAc
aagtttttcctaattttgacTTGTTGGAGACATGTTTACAAACTGTCCAA
CAGATTAATCGAACCGTTTACAATGAACTGTTACCACGTGCAAAGCAAGT
GAACGAATCCTTCACGAAGATTAAAAATGATATTGTACTTCTGGAGGATG
TTATTTATTTGACAGagAACAAGACTTTCACAGACCTCACAGTGAATGGA
AAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATC
CGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAA
ACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTC
ACATATTCAACTGAACAAACGATTACTGGATtgaacaaatttcaaaatga
tgTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATC
TAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATT
AACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCAC
ATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGC
TTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAA
GACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTT
AGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACAGATCAAA
ACATTACTGCATTGCATCAATTTACAAACAAGACCACAATGCAACAGGAT
TTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACTATTGCTTC
AGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATATCAACGAT
TCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACAAGAAGACA
ATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATCTATCTGAA
CGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGTCACTTTCA
ATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAATCGATGAT
TTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATCACATTCAA
GCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAAAATCAACA
ACCTCAATATTACTGAAGACATCATGGACGTTTCATCCAACCAAACCATT
ACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCGAACAATCTTCA
GGTCCATGATCATCTTGATGGAATTGACATCAATGCATTTATCAAGAACG
TTATGACTTACAATACAACTCAAAACGTAACTGCAACAAAATTCTTCAGT
AACTTGACCACAGATTCGATATGGTTCAACAACTGTACAGACCAACAATG
TATCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAAAA
CCAACGGACAGATATCAGTGAATGGAACAAAATCTTTCTCAGATGTTTTA
ATCCGCGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTCCC
TGGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTACA
CTTTCAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAAAT
GGTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCA
TGAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTTTG
ATGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTGAT
GCACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTCCA
AAACGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTG
GTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTGGTGACA
ACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTTTCCAAAACCA
CGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGACGGTGTcaaca
tttcaaaattgaatGATCAAGCTATGAAGCTGGATGAGGATCAAATTGTC
ACTGGAAAGAAGattttccaagagAAGATTGAAGTCTCGATGGAGAATCT
CAAAGTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAAC
AATCCATCAACAAGAACGAGCCATCAGTTGTGATTCGACAAAACTCGACT
ATCCAGAATCTAACAATCCGTGGTGACACATCCACCCATGCATTGAATGG
ATTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATC
AAACTATCCATGGTGATGTCTACGTAAATGAGCTTGTTATCAATGGCGAT
CTCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCA
GCTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTA
TCACAACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACA
GAGTTTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGG
CAAGAAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATA
GTTTAATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTG
AAGCAAGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGAT
TCTACAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTAT
CaacattcgaaaaagaaatcttgTACAAATGCGAAGGACCTAAAAGACAC
GTGGTCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGAC
TATCGGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCAT
CCCTGGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGT
AAGAAGACCATGAAANAAACGGTACCCACGCTAAACGTCTACTGGTGCAT
AACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAA
TGAAGAACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGA
AGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTG
ATCGACGGNTAACAACCTGTACGTAGAGAAGATCAACAATTATTCATTCC
CTGGTGATTTTGTTCAAATTAGAGATGATGAAAATATCACAATAACTGGC
ATAAAGACATTTTCAAACGACACCATAATCACCAATGACTTGATAATGTC
ACCAAACAGCACTATCAATGGATTCGACCTATCAGAGATCGCAAAGGAGA
TTGTCACTATTCATGAAAACGTTTCCATAGAAACTGATGTTGTGTTTAAA
AATCCAGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTTGAATCAAGT
GAATATCTCGTCGGAAGAGTTGCTGTtgaaatcaaccaatcaaaaagTGA
CAGGTCATAAACACATACTGAAGTTGGAAGTTCAAGGAGATGTCATAACT
CCAAACCATATCAATGGAGTGGACGTACAGAAGATGTACAACGAATCNAT
C
Run BLAST on NCBI

transcript from alignment at sc0000039:670285..683731-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004144 ID=TCONS_00004144|Name=TCONS_00004144|organism=Clytia hemisphaerica|type=transcript|length=13447bp|location=Sequence derived from alignment at sc0000039:670285..683731- (Clytia hemisphaerica)
AAGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATGTAAGTTTA
GCTTTCTACCTTTTTATATATGCCTGGCCTTTAGTTTGTTCAGATTTGAT
CAATATTTATCCGAAAGATGAACCTTTTTTCTAATATTTAAAGAAAGATC
AATTTGCTTTTTTTTAATGTCAGATTTTGAGATTATCACCTTGGATTAAG
TGAAATGTTAACTGTTTTCTACGAACACGATAATACAAGGCTTAGGATTA
AATTTTGTTCAATCAAATTTTATCCCGTGTCAGGAGTTCAATCTTGTTTA
CTGTCAAGATTTTTAAATGTCCCATCAAGGGTAGAATAAGCAATTTTTTT
CCTCAGTCGCAACAAGGGTTACCCAAATGAATCTTGTGAACTTGAGATAA
CAAAGTTTTTGGGCCTCGATTTATCCTCATTTACAGTAAACAAGGTATGG
ATATGTGCTGTGTTCGAACCGAAAAAAAAGCTACGGTTTGGAAGCTTTTT
ATATCCATTGTATTGGTTCTAGCTTGGACTTGCGTTGAAAAATTAGATTG
TTTTCCTAGAGTTATATTTCATTGAAAATTCGGGATCGATTTTTCTTTTT
TTAGAGTATAAATGCGAAAACTCAACTCCTATTGAATATTAGCCATTAAA
TTGAATTGTGTCGTTAAAACTGTCCGTTATAGGTCGTACGTCGAAAAGTA
AAAGTGTAAAATCTTTATTTTCAGTTGTTCTTTTGGTTGTGGTTTGTGTG
GAGCATGCGTATTGCGTTAAAACATTCCACGATGAAGAACTGCATTCGAA
AATCCCGCTTCGTTTGAAACGTGAAATCGAAGAACTTGTTCACAAACAAC
TTCATCAAACCATCTCATTGCATTACAATACAAATGATGACGTCATCAGC
TTGTCACGTGATCCGATTATCAAAACGAATTTTCACCATCGAGCAAGAAG
AGGTATTGGCCCGATTTCTTTCTGAAACAGTTTCTATTCAAATGTGTTCG
AAAAACCAAACTATAGTGGGAACTCGTTTTAGTTTTAAACGAGAATCAAA
ATTTCAATATAAGGAAGTAGAGATGGGAATAATTCTGGTCCAGCCAATGG
AAAACAATGTCTCACCAAAGACCTTTTTCTACTGCTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGACTAATTGTATGACA
TTTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGCAATGAAACAGT
GTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTGGCG
GAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAATGAA
GATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGGTAA
GCGCTATATTTATTTTGTAATGTTTGTTTATATTTTCATAACCTGAAAAA
TAAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGATATAGCAGTAA
TTTTATGTAATTTTTGCAATTTTCAATGAACACTTTATGATAAGCACAGC
TTGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGTTCATACGTCTT
GGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGACAGATGCCATCA
CTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTGGCAAGTTGACC
AGCACTGAGATCAAACTTTACAATTACGAACTCACCTCGTCGACATTCAA
GTTTGCACAGAGCATCCAAGTTCAAGATGGCATCTCTTTCACAATCATGG
AAACTGAACAATCAATCTACCTGGTGGTCCTGGAGAAGTTTTCCGGTCAT
TATTTCGGTGTTTCCTCGAGAATGTACATGTATGATCCATCAAGACTCTC
CGGAGGTGTCTTCCACACATATCAACCTATCTACTTCAAAGTTTACGATC
CTTCAGCTGTTACCAGCCTCGAAATTTATGGCAAACCGTATTTAGCTGTT
GTCAACAGGAAAAATAAAGGTGAATTAAATTGATACTTTTCCTTATGAGC
ATTTATTTTGGCGTCCGGCGGTTGGTCAAAATACGATTAAGGGCGAATAT
TTAATTTGGCGAATGGCAGAATTTGTATAATTTAGCGGGGATTTGATTTG
GCTAATGAGAAAATTTAGACGCTTGCAAATCAAAAAATGATAGTTCTTAC
TTAAGAAGGCTGATTTTTTTTCATGTACAAAATTTGGCGGGTATATAATA
CAGATGAGATGAAGCTTTTATAAGATACTTTACTAATTAGTCATTTGAAT
CGAAGTACTAAAAATGTCGCGTTCTTTAGAAAAAGTAACAATTGTTTTAT
TACTGGTTAACGACCGACCAAATCAAATAAGAGCTTATAAAAACTCCATT
TCGTCCCATATAATATGGCGGATTTTACTAAAACCCACTAAATCAAGATT
TAAGCCCTGCCAAAAGTTCACTTAAGTATATCATGATACTTCAAAATAAA
ATCACTCTTGTAATTTTGGACATATCTCGTATAATAGAATTTCATCTTAT
ATGACCAAATAGGCCTGCTTCATTTTGGTTATTCGTGAAACTTCCATGTG
AAATACTATCATTAAATTTATAAATCTGTAACAATTTTTTNTTGAATTGA
ATTGACCAAAGACCTTTGTGCATTTTTTACGAAAGTTGATTGTAAGACTA
ATTGTATGACATTTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGC
AATGAAACAGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAA
GTGTGGTGGCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTT
GTTTGAATGAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGT
GTCTCTGGTAAGCGCTATATTTATTTTGTAATGTTTGTTTATATTTTCAT
AACCTGAAAAATAAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGA
TATAGCAGTAATTTTATGTAATTTTTGCAATTTTCAATGAACACTTTATG
ATAAGCACAGCTTGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGT
TCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGAC
AGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTG
GCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTCG
TCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGAT
AAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAAG
CACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCTT
GCAGTTGTAAGTAAATGTTATCTAAACTTCCATTTTAAAGTACTAAAGAA
ATTTGTAAACATACCGTATGCAGCGGGATACAAAATCAAAACCAATGTCA
CATTGGTTTTTTTTTTGTTTCAATTGTTTTACAAGTTTGTTTTGGACACG
TGATTTTAATTGTTCTCTTTAATGACACGTGATTCGCGCAATGTTTACAT
TTTACTACATTCTTATCCCTTTAGTCTGAGGCAGATTTTGGATCGAAATT
ATGCCTGTGGAAAGAAATCAACGATCCGAGCCTATGTGATCAGAAATTAA
TAATAGGATGCTAAAACTCTTATAAGCGAAGAAAACTTCTGCCAGGACAA
GTTATTCCATAAAACCTCTACATTTCCAATCGGTTGAACGATCATGGGAA
AATCTATTTCATTCAATCTTTTTTTCTAGCATTATCTTACAGAAGTACAC
CATACTTTTACGAATGGAACCATGTTGGATTAACCATCGTCCCTAGCGAC
AACTTGATAACATATGGTGCTGAAGATGTAGAATCGTTTCATATCCATGG
CAACGCTTTTGTAGCAGTTGCTAACCACATCAACGATCAACGACAATATC
ATTTGGATTCTGAAATTTATGTTTTTGATTTGGCTAAACGACAGTAAGGA
TTTTCATCGTTTTTAGCACTGGCTTGGAAAATAACTCAACATTGACAAAA
ATGAAAATTGCATGAATAAGGCGATAAGAAAATTCAAAACATTGTNGGCA
CTGGCTTGGAAAATAGCTCAAATTGACAGATATGAAAATTTCATGAATAA
GGCGATAAGAAAATTCAAAACATTGTTCCATAAATTTGAATTTCGTCTAG
TTTTCTTATTTATACTATACCTAAGGGAGGTAACTGTGGCTATTAATTAT
TCTTATTATTAACTCTCGTCAATTTATTTCCCATCTTAGATTTCGAAGTT
TCCAAAAATTACGAACAGATGGTGCAATTGATTTGGAGTTTTTCGTGATT
GGTCGAGGCATAACACGTGAATATTTCCTCGCGGTTGCAAACCATGTCAA
GGTTGTCCCTGGGCTCGGCAAAACGCACGAGGTTGACTCTATCATCTACA
AATGGAACTGGAATTTGTTTGTTCCTTTTCAATGTATTAAAACGAACGGT
GCCAAGAAATGGACTGCTGTTACTGGTACGTTGCTTACAATCTCAAATTT
CAGTTCAAAAACAGCTCGTTCTTAGTTGCCTATAACTTATTTTGGAATCT
TTCGTGGTCGACTTTAGGCTAAATCTTCTGAAAGGTATCTTCATCTTTCA
ATTTCTTCTCATAACTTTATGATTTTCTCCGACGATTGCCTTTTCAATTC
AAACCAATTTCAATCTGATTTAAACCATATCGATTGAGAGTTAAACTTGT
GTTTATTTTTCTATATTTTGTTAGGTCAAAATGGCGAGTTCATATTAACA
CACACCAATATGCATGGAAACGTCACCTTCTACAGTTACGATGGTTGGAG
ATTTTACTTGACCAAGAAGCAGCCACAAGATCAGATCTTTCAACATTCTG
CAACTACAACCTCCATCTCTATCAACACTCCTTCCTTCTCCACTAAGATG
TTGGCAATACAACCAAAACCAGAGTTTGTTGATGACGTCAATAACATCTA
CTCTTTCCAATTCAAACAAGTTTTTCCTAATTTTGACTTGTTGGAGACAT
GTTTACAAACTGTCCAACAGATTAATCGAACCGTTTACAATGAACTGTTA
CCACGTGCAAAGCAAGTGAACGAATCCTTCACGAAGATTAAAAATGATAT
TGTACTTCTGGAGGATGTTATTTATTTGACAGGTAAATCTTAAGTCTAAC
CTCTTTACACGTATAACAGATTTAATAGTGAGATGAAAAATTTTAAGACA
AGCTCTACATAATATATACGAGGGTTTCACTACCTTACACGAAGAGTTTT
CAAACATGGCAACTTAGATAAAAAGCAAAGCTCTATTGGAGAAAGGCTTA
AATGGCTAAAAATCACCGAAATCGTAAAAAAAAGGCTGTAACTTTTCTGT
TTCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAGTGAATGGAAA
AACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATCCG
ATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAAAC
CAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTCAC
ATATTCAACTGAACAAACGATTACTGGATTGAACAAATTTCAAAATGATG
TCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATCTA
ACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATTAA
CAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCACAT
TTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGCTT
CGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAAGA
CTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTTAG
TTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACNAAGGCTGTA
ACTTTTCTGTTTCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAG
TGAATGGAAAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTC
TCCCAATCCGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCA
GAAGACAAACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAAT
CCTCGGTCACATATTCAACTGAACAAACGATTACTGGATTGAACAAATTT
CAAAATGATGTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGT
TGGCAATCTAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAA
TCTACATTAACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGC
AATATCACATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGAC
AACCAAGCTTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGA
CTTTCCAAGACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTC
AATGGCTTAGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATAC
AGATCAAAACATTACTGCATTGCATCAATTTACAAACAAGACCACAATGC
AACAGGATTTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACT
ATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATA
TCAACGATTCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACA
AGAAGACAATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATC
TATCTGAACGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGT
CACTTTCAATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAA
TCGATGATTTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATC
ACATTCAAGCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAA
AATCAACAACCTCAATATTACTGGTTAGTCTTAATTTAATAAGATACTTT
AGATTTTCGTGTGATTATCTGTAATTATCTTAACCCGTAGCGTAGATGCT
TTAAAGTGCAGCACATTTTGTAAAATCACTCATTTAAACTTTACTCTGCA
AAAGTTTCATTTTCATTCAAAGAACAAACTTAATCCATCACCATTGGAAA
ATTTAAATATGTTTTTTAGAAACGGGTTGTTTATAACATTCTTTTAATAG
GAATATCTTTGAAATTAATATAGTCGGGCTTAAAAGTAGACCAGTAACTG
AAATCAATTACATTCTTATTATTCTAGAAGACATCATGGACGTTTCATCC
AACCAAACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTC
AAACAATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCAT
TTATCAAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACA
AAATTNATCAGTTGTGATTCGACAAAACTCGACTATCCAGAATCTAACAA
TCCTTGGTGACACATCCACCCATGCATTGAATGGATTGAATTTGACCGAC
ATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAACTATCCATGGTGA
TGTCTACGTAAATGAGCTTGTTATCAATGGTGATCTCAATATTACCAACC
TTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTTAGCAACCCAGGA
TCCATTTCATCTCACCAATTCTTCCAAGACGGTATCACAACACAGCAGTT
GGTCACACAACTACTCAATGGTCAAAATCTAACAGAGTTTTTCAACAGNC
CTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAAAACCA
ACGGACAGATATCTGTTAATGGAACTAAATCCTTCTCAGATGTTTTAATC
CGTGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTCCCTGG
TGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTACACTT
TCAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAAATGGT
TACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCATGA
ACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTTTGATG
AACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTGATGCA
CTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTCCATAA
CGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTGGTC
TGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATTAATATAGTCGGGCTTAAAAG
TAGACCAGTAACTGAAATCAATTACATTCTTATTTTTCTAGAAGACATCA
TGGACGTTTCATCCAACCAAACCATTACTGGCAACACCATTTTCACCAAG
AATCTCCAAATGTCGAACAATCTTCAGGTCCATGATCATCTTGATGGAAT
TGACATCAATGCATTTATCAAGAACGTTATGACTTACAATACAACTCAAA
ACGTAACTGCAACAAAATTCTTCAGTAACTTGACCACAGATTCGATATGG
TTCAACAACTGTACAGACCAACAATGTATCTGGTTAAACATCTTATTGAA
ACTTAAGGAAGAATCAATCCATAAAACCAACGGACAGATATCAGTGAATG
GAACAAAATCTTTCTCAGATGTTTTAATCCGCGGTAATCTCACTCTTAAT
GGTTTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCAGCGATCCAT
TGATGAAGTGATCAATGGTACCTACACTTTCAACAACGTCACATTCGTCA
AAAATATCACCGCTGATACGCTAAATGGTTACAATCTAACTGAACTCTAC
GAACGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCATCGCCAATTG
GTCTTTCAATGATCACACTCACTTTGATGAACTTCAAGTTGATGGGTTGG
TTGACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAATCAGGATCAT
GTAATTTCTGGGGAAAAGACTTTCCAAAACGGTACCCACGCTAAACGTCT
ACTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGA
CTCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGACATCATTATC
AAAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAAC
GGTGGGATTGATCGACGGTGTCAACATTTCAAAATTGAATGATCAAGCTA
TGAAGCTGGATGAGGATCAAATTGTCACTGGAAAGAAGGTATGCACATTT
AGAATTATCAAATAAATTTTTGAAAGAGCCTGAAGAATTTCATGAGCGTT
CTTTCTTAATTTTCTTACAGCCATTCTTCGTAATCTTTATAAATGCTAAT
AGTGGTGTAGCTCGAAATGGTGCTTAAAATACATTTAGTTCATTCAGTGA
TTTCCTCACACTTTTCTTTTGATCACTTAAAGTAAAATCTCTGGCCCAAC
CTTCATACTCTGTTGAAAATTCCTTCTAACAATTGAACAAAAGATTCAAT
CAAAATTTGTTACATATATCGTGGGTCTACTCTTAGAAAAGTTTTCACCC
TTTTTCAGATTTTCCAAGAGAAGATTGAAGTCTCGATGGAGAATCTCAAA
GTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAACAATC
CATCAACAAGAACGAGCCATCAGTTGTGATTCGACAAAACTCGACTATCC
AGAATCTAACAATCCGTGGTGACACATCCACCCATGCATTGAATGGATTG
AATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAAC
TATCCATGGTGATGTCTACGTAAATGAGCTTGTTATCAATGGCGATCTCA
ATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTT
AGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTATCAC
AACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACAGAGT
TTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGGCAAG
AAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATAGTTT
AATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTGAAGC
AAGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGATTCTA
CAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTATCAAC
ATTCGAAAAAGAAATCTTGTACAAATGCGAAGGACCTAAAAGACACGTGG
TCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGACTATC
GGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCATCCCT
GGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGTAAGA
AGACCATGAAANAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACA
TGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAA
GAACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGT
TTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCG
ACGGNTAACAACCTGTACGTAGAGAAGATCAACAATTATTCATTCCCTGG
TGATTTTGTTCAAATTAGAGATGATGAAAATATCACAATAACTGGCATAA
AGACATTTTCAAACGACACCATAATCACCAATGACTTGATAATGTCACCA
AACAGCACTATCAATGGATTCGACCTATCAGAGATCGCAAAGGAGATTGT
CACTATTCATGAAAACGTTTCCATAGAAACTGATGTTGTGTTTAAAAATC
CAGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTTGAATCAAGTGAAT
ATCTCGTCGGAAGAGTTGCTGTTGAAATCAACCAATCAAAAAGTGACAGG
TCATAAACACATACTGAAGTTGGAAGTTCAAGGAGATGTCATAACTCCAA
ACCATATCAATGGAGTGGACGTACAGAAGATGTACAACGAATCNATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002302XLOC_002302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004144-exon-sc0000039-1575043694:683691..683731TCONS_00004144-exon-sc0000039-1575043694:683691..683731Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:682780..683007TCONS_00004144-exon-sc0000039-1575043694:682780..683007Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:681686..681865TCONS_00004144-exon-sc0000039-1575043694:681686..681865Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:679676..679983TCONS_00004144-exon-sc0000039-1575043694:679676..679983Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:679039..679252TCONS_00004144-exon-sc0000039-1575043694:679039..679252Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:678507..678742TCONS_00004144-exon-sc0000039-1575043694:678507..678742Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:677850..678257TCONS_00004144-exon-sc0000039-1575043694:677850..678257Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:675959..677008TCONS_00004144-exon-sc0000039-1575043694:675959..677008Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:672144..673090TCONS_00004144-exon-sc0000039-1575043694:672144..673090Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1575043694:670285..671823TCONS_00004144-exon-sc0000039-1575043694:670285..671823Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:683691..683731TCONS_00004144-exon-sc0000039-1510915933:683691..683731Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:682780..683007TCONS_00004144-exon-sc0000039-1510915933:682780..683007Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:681686..681865TCONS_00004144-exon-sc0000039-1510915933:681686..681865Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:679676..679983TCONS_00004144-exon-sc0000039-1510915933:679676..679983Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:679039..679252TCONS_00004144-exon-sc0000039-1510915933:679039..679252Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:678507..678742TCONS_00004144-exon-sc0000039-1510915933:678507..678742Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:677850..678257TCONS_00004144-exon-sc0000039-1510915933:677850..678257Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:675959..677008TCONS_00004144-exon-sc0000039-1510915933:675959..677008Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:672144..673090TCONS_00004144-exon-sc0000039-1510915933:672144..673090Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1510915933:670285..671823TCONS_00004144-exon-sc0000039-1510915933:670285..671823Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:683691..683731TCONS_00004144-exon-sc0000039-1491911889:683691..683731Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:682780..683007TCONS_00004144-exon-sc0000039-1491911889:682780..683007Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:681686..681865TCONS_00004144-exon-sc0000039-1491911889:681686..681865Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:679676..679983TCONS_00004144-exon-sc0000039-1491911889:679676..679983Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:679039..679252TCONS_00004144-exon-sc0000039-1491911889:679039..679252Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:678507..678742TCONS_00004144-exon-sc0000039-1491911889:678507..678742Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:677850..678257TCONS_00004144-exon-sc0000039-1491911889:677850..678257Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:675959..677008TCONS_00004144-exon-sc0000039-1491911889:675959..677008Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:672144..673090TCONS_00004144-exon-sc0000039-1491911889:672144..673090Clytia hemisphaericaexon
TCONS_00004144-exon-sc0000039-1491911889:670285..671823TCONS_00004144-exon-sc0000039-1491911889:670285..671823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:670285..683731 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.21463	7.12752	4.02504	0.697129	0	0	2.51579e-06	0.124349	0.149395	0.463768	0.0818763	0.607747	0.428556	2.04071e-07	5.29351e-08	0	0	3.5741e-08	0	0	5.46966e-09	0.118061	0.904672	3.31646	3.5397e-06	0	0	0	0.382474	7.80401
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004144 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top