TCONS_00004093 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004093
Unique NameTCONS_00004093
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2324

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004093 ID=TCONS_00004093|Name=TCONS_00004093|organism=Clytia hemisphaerica|type=transcript|length=2324bp
gttttgatttcttttaaaattatttttttctagaaaaaaaaaccacaaaa
ataaattattttgaaaatgaatctGTCGTTatcataaatttttatttttt
gaattgaaatatGGATAGTGGAAAATCAAGTCCATCCAATCTTGTTCGCT
CACAATCACTCAGATTATCAAATTTTAACCGGACATCATTAGTACGTAGA
AATCAAAGTGTAAGTGCAAAACAAGTGAAATTCTTTCGTAATGGTGATCA
ATATTTCTCTGGTTTGAGACTTGCTGTTTCCATTGACCGTTACAAGGAAT
TTGAATCATTGTTAACAGAGTTgtcgtcaaaattgaatttaCCTACTGGA
GCAGTTAGATATCTTTTCAATGCAGATGATGGATCTTTAGTATCAGATGT
ATCtcaacttcaaaatggaatttCTTATGTTTGTTCATCTTCTGCATCAT
TCCGTCAAATCGAAGGCGGTTACGGAAAGTTGGTTCCAAATTGGTCCAAT
ATCAAGAGATCAAGAAATATTTATCGACCACTTAAAGTTTTaggaaatat
agaaaattctTTTCGTCTGGATAGTAGTAAAGACTTTATTAAACCCAAAT
TGGTGACGGTAATAAGAAATGGGAAACCaccgcagagaaaagtaactcTG
TTATTGAATAATAAGACAGCAATATCATTGGATCAAGTACTTGACCAACT
GTCAGCAAAGGGATCGTTAGGGAAGGTGGATAAACTTCATACTACATCCG
GAAAACCaATACGTGCGTTACGAGATTTATTCGACGATACTACTGTTTTT
ATCGCGCTTTCCACAAACGAAAAGTTCCCTGATGATGGAATTGAACTCGA
CCCTAACAGTTATCGCATCACACCGTACCGTGAAATGAAGAAATCGAACC
AGATGGCTGTCAGAAGATCGAACTCCTTGAGACACAACATGAGATATAAA
GATGAAAACGAAAATATGTCTCtatCAAATATTCGAAATTTAAAGAATGG
TGCATTGCCTAAGCATGCACTGTCAGCACGACAAAGTGTGCAGCCAAGAA
TACGAACCACGTCACGTAAAGAAgaacagaaaaataaagaagaattataT
CCGACGTCCGTCTTCGCAAGCGACTCTGAATCAGATGACGAGAAGATGGA
AATGTTTTCAAACGAAgtctaaattaaaaacaaatttaatcAGTTAAATT
GTAATTAAACTTAAAGTGATCATATTATCCGcttctaaatattttcaaaa
taatgtaCAGAAATAAGAGATAAACTTtgtaaattttagtaaaaatgata
ttatactttcgttttcttccTTCGCCACTCACTGTAAAGCATTCAGCAAT
CGTGCAAAcacttttttgggggaaattaTCATAGAAATACTTATTACGTA
CTTTGGAAATTATAATGTGCACGTTGCATTCTTCACAGGAGTGCGAGGAA
GAAAGTCGAAGAAAAAAGCCGCTAAAACTTTAAACAATACTGACAGTAAT
AATAGTAACAGTAAAACAATGGACATATACAGCACAGTGTGGTTAAGCGA
TTATGAATCGATTAAATCTGTCGGTAGTAAATCGTTAAACACGAGTGCTT
CTTCATTCACTGAGAGCATTAACATGTCCCACTCCACCCCTCGTCGTCCC
ATTGCTAACCAAACAATTAATATCCCTGTTGCTGGGCAATCAACTAAACa
atcaaaatggcggacatTGAGTTTACCGGAGCTCGAAATGTCGACGTTGA
CGGGTGATGATTTAACCGAACGTTTTGTACGTTTACAACTTGAGCAGGAC
AATCGCGAATTACGTTCCACCGTTGATACGTTACAACAGACATTGGAACA
AGTCAAAACGTCCGTCTTCCCTTACGAAGCGGAATGCTGTGACGAATGTG
CGGATAGCAGAAACACACTGGATAGCATCTTTTACGAACTTTCTCATAAA
ATGCATCGTAAAAAGCAATTAGAATATCGTGATTACACTCCGTCTTTCGA
GCGAACAGAGAGTGGTTACGACACATTACAACCACAAGACTCCTCTCTTC
ATCGGCTTTCATCTACTTTTGACAAACAATCCAACCATTCTTTACTTTTA
TCCTCAACAGAGGAACACCAAAGTACCCCGGAAGATTATTTCCAATCTCG
ATTAGTCAAACGCCGAACTGCTCTTGCCAGTCATGACACTTCGTGCTGTA
TGGTCCAATGAAACACCTAAAATTTAAACCATAGgttaaaatatatttat
aaatcttaatttattattttaaacatttaaattattttcttataatgAAT
ATAACTTGCTAAATGAAATTAACC
Run BLAST on NCBI

transcript from alignment at sc0000039:13602..22475-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004093 ID=TCONS_00004093|Name=TCONS_00004093|organism=Clytia hemisphaerica|type=transcript|length=8874bp|location=Sequence derived from alignment at sc0000039:13602..22475- (Clytia hemisphaerica)
GTTTTGATTTCTTTTAAAATTATTTTTTTCTAGAAAAAAAAACCACAAAA
ATAAATTATTTTGAAAATGAATCTGTCGTTATCATAAATTTTTATTTTTT
GAATTGAAATATGGATAGTGGAAAATCAAGTCCATCCAATCTTGTTCGCT
CACAATCACTCAGATTATCAAATTTTAACCGGACATCATTAGTACGTAGA
AATCAAAGTGTAAGTGCAAAACAAGTGAAATTCTTTCGTAATGGTGATCA
ATATTTCTCTGGTTTGAGACTTGCTGTTTCCATTGACCGTTACAAGGAAT
TTGAATCATTGTTAACAGAGTTGTCGTCAAAATTGAATTTACCTACTGGA
GCAGTTAGATATCTTTTCAATGCAGATGATGGATCTTTAGTATCAGATGT
ATCTCAACTTCAAAATGGAATTTCTTATGTTTGTTCATCTTCTGCATCAT
TCCGTCAAATCGAAGGCGGTTACGGAAAGTTGGTTCCAAATTGGTCCAAT
ATCAAGAGATCAAGAAATATTTATCGACCACTTAAAGTTTTAGGAAATAT
AGAAAATTCTTTTCGTCTGGATAGTAGTAAAGACTTTATTAAACCCAAAT
TGGTGACGGTAATAAGAAATGGGAAACCACCGCAGAGAAAAGTAACTCTG
TTATTGAATAATAAGACAGCAATATCATTGGATCAAGTACTTGACCAACT
GTCAGCAAAGGGATCGTTAGGGAAGGTGGATAAACTTCATACTACATCCG
GAAAACCAGTAAGTTTTTCATTTTTCCATTTTTAGGGTTAGTTATAATTA
TTTTCTGGTAAATCTATATAGGGGAAAGTAGACCAGAGTAGACCTTCATT
TTGATGAAAATGAAAGCTTTTATTTTATGTGAAAAGAAATGTTCAGACCA
TTTTTCATGGGATTATATTAAAATTTTAAAAATTGATGAGCTAGAGACTA
ATATGAAAGGGGTTTTTTGCTATAGAATCTTTTATAAATATTATCTCTAC
GAGCAAACAGTTTGGTTTTGAAATTATTTTTTATTTACAAGACAGTTGGA
GTTCAAGGAGATTATTTTTTTGCCTCATCAGAGAATAGTTTTTTAAAAAC
TTTTTCATATTCATTTGTCAATCAATGGTCCTCTATTGCTTTCCAAACAG
GAGAGTAGTAAAATTTTCAAAATATGTTGTTAAACTCCCCCTATTCCTCT
CTACTCACTATTTTTGTTTAATTAGTAAGTCCATATCTGTTTCCCTTCNA
TTCCTCTGTACTCAATATTTTTGTTTGATTAGTAAGGTTCTATCTGTTTC
CCTTCTTAAAGCCTATTAAAACATTGATGTCATCATTTGACCAAGCTCTA
AACTATTTCAACGTTTCTCCTTTAAATTCCTAAAATCATTATATGCGTCT
GAAAAATGGAAGATCAGTGTTGCGTTTTCAATAAATTCACAAGGTTGAAA
AGTTGAAAATAGCTGGAATTATAATCCTGTCCTGAAAAAGTTTGTCTTTT
TTTTTGAAAATCATTGAGACTATATTATGCAAATTTTGACGAATTCAATT
ATTTTGATTCTTATATAAAAACCCCAAAAGTCAATAAAAAAGATTCATTT
TTCGACACATCTGATTTTTATCATGATACCATATTTTCAACGAGTCTTTA
TAACTCATGTATGTTAACCAATATTGTATAAACATGATTGGAAATACCAC
ATAAAACGTTATTAATACATCATTTAAGCAACTCTATGTTATTGCAATGA
AACTCGCACTTTCACTCGTCACAATAACAGTATTTTGGCATTCATTTCTC
AAATATTTTAACGTCATTGTGTTCAGTTTCACCACCGATGGTTAGTTTTT
GCTTTATAACATTGCCTTTAACAAACTCCCTCACCCTTCCTGACAGAAGA
ATATTTGATATTCACAAATGTTTTCTTTTATATAAGGATTTAACATCAGA
CTTTTACCACACATTTGTCAATGGGGTTTTATTTCGGAGTACAGACAGAC
CCTGCACAACTTGGAGAGTGTCGATAACTCAGGGAAACCCAGGGCAATTT
ATTTTCCAGATTCCACGGAAAACATTTTCTTGAATAGCATTCAAAAATTT
GTTAATTTCGTCATCAGTTACAAAATAAACTAAAGGTCAAATATGTATAA
TTTGTAAGTTTTTAATGAAAATGCATCTCGATTTGCTCAAAGCCCTCTAT
CTGAATCTTGCATTTGGAAGTTAAGAAAACAATCGAGGTTTTGCAAAGTA
TATTTTTTAAACACGCAGTAATATATAGCTTGTTTGTTTTCATTCAAAAC
CCATTATCGAATGCAGTCAGCGTTACCATAATTTTTCCTCAATGAAATTT
TCAGACAAATTAGTACGAGTAATTACTACTAGCTTTAAACTGTCTAAACA
CTTAATGAAAGTTCCGGATCAAAGTCTTTCCTGTTATGTAACGCAGAGAG
AATCTGCACAAATGATTTAAATGCTCCCTGATCCTATGAAATGTCCAATG
ATTAACTATTTCATCATCTTATTCCCTGCTAATTTTACGCTCGCAAGTGT
CCTATTCGTAATAATTATTTAGTAAGAATCAACACAGATTCATAACAGAA
GAGAGTGTCTCGAACTCCCGTTCCTGCCATTCCATCTTCTATTGAATGTA
GATAAAACTGTCCTAAGTAAATTAATGACCTATCAATATCAATTATGAAC
GCCACATTATATCTCTCAACCCTACAGAAAAGGACCTTCTTTCCGGTTTT
AATAAATACTTGATCTTCATGACGTAATCTTTCATACGGAAACACCCGAA
AGCACCGGGCGTTTGCCACCAGTTTTGAATTTAAACAATGAAGCTGGTGG
CAAACACCCGGTATTTTTTGTGTGTATATCAAGAATTGGATTATTACATG
TGATGAAATCAAAATATTCTCAACTTCAGTTGAGCTAGAATCTGACAATT
TGTGTCTGCGTATGTCTGTGTGTCACAAAAACAATAGGGCTGTCTGGAGA
CTTCAAAAATGGTCGGATTCGGCTCATTTCGCAAATTTGTTCCTTGGGTG
AATATCTGAGTGTTTTTTCAATTTATCAAAAAATTTGATTTTCAAGGCCT
GGGCACTTATCTTTTTGTGTTTTTTGCTACAATCNTGTTTTTTTTTTATT
TATCAAAAATTTTGACTTTCAAGGCCTGGGCACTTATCTTTTTGTGTTTT
TTTGCTACAATCGGGCCTATGAATAATTTTACCCATTTGAAATCCAAATT
TTACAAAGACTTAAAATCATAATGATCTCAAGCAAGATTGTAGATGCTTC
CTGCTGTAAATTTGTGGTCCTCTAGTAGATATCCTCACTGTCAAAACTGG
CAATGTTTGCTTTTAGGGAATTGTTTAAAATTTAAGGCCCATCTGTCCGG
GATTGAATCCAACCATTAAAGCAAATATCCCCCCTCTAATCCCATCCTAT
ATCACATTTCAGTTTATCATACTGGAATGAAAAAGTATACTGGAATGCTT
ATTAGCAGTCCTTATTATTGATATGGACACTGATGTTTTATGAAAATATG
AATGAAATGAAAATTGATGTTTTATCTCTCGTTTAGATACGTGCGTTACG
AGATTTATTCGACGATACTACTGTTTTTATCGCGCTTTCCACAAACGAAA
AGTTCCCTGATGATGGAATTGAACTCGACCCTAACAGTAAGTCCTCTAAT
TGCTTTGATATTAATCCCCAAGTCCAAAAGTTGCAGCTTTTCTATTTCGA
CTCTCTAGTCTACCGGATGTACCAGGGGGGGGTCAGGGTCCATGATACCA
ACCCAGGGCCCAAAAACCTGACTTTTTGAAAGTAGTAGACACCACCACCC
CCTAAATTGGTATCAATACCAACTTGAAAACTCCAATTTTTCTGAAAAAG
GGGGGACCCACCCCCCTAAATTGGTATCAATACCAACTTGAAAACTCCAA
TTTTCTGAAAAAGGGTCCCCCTAAATTGGTATCGATACGAACTTGAAAAT
CCCGATTTTTCTGAAAAAGGGGGACCCCCCCCCCCTTAAACTGGCTATCA
GTAAAAATGCAAGAAGTTATATGCATAGGATACTACATACAAGGGACGCT
AAACTAAATCTGTGGATGTTTTTATTCAAAGAACATTCCTCTTATTAATC
ACTTATATTATTGTACCACACTTTAGACTCCTGAACATGAAAACAAGTTT
TTCTCATTCTAACACAACGTAAATTAAGTTTCTTGAACTAAATTGGCAAA
ATGTATCAAATTCATAAAACTAGTCCACCCGGGGTGGAAGGGCAGTCAGG
CAAATTGACCGACGGGTATGTGCGGCGGTTAAGGGTATGTTTTTCAAAAT
ATGTAAAGGTGGACTTTTAATAAATGCACTGGATGGGTGGAAATTTCAGC
AAATCTAGGAAAAATTGCAAATTTTGGCTCGAAAATCTTGATTTTTTTGC
TCTAAGAGTTTAAAATTTGAAAAAATGCACTAAGGGTTTGTAAGGGTATG
AATTTCACCGATTCTTTTCTGCACTGTAAGAGTGCGATTCTAAAAGCCAT
TTTTTTCGTCGCACATAATGTCAGTTGGTAAACCCACTGCCCCCGGGCTA
GTTGATAAACTACACTAGATAAAAAACTCATTGTATTAGGCAAGCCTTGA
GTCTTTGTAACAGCCTGTATGATGAACGTTATGTACAGAAAATTTTATCA
CGACTAAAAAAGATCTAAGATCTGCTAAGACTTGATTCAACTTGTTCAAC
TCTAGTTTTGAATGAATTTTGGTTGATTGAAAGGATTGAGAGCAGCCAAA
GTTAAATAAGAATTTAACTTCAATTATAGAATGAAGAATGCTTTTATATG
GAATCAGGGTATAGTGTAAACGATTCAAATAAGTTTTTATCCTTACATTA
TACAATATTTTAAGTCAGATACCAATTTCAAATTCAGAAATTAAAAAAAG
GGGGAACCACCCCCTCATTTTGGTATCGATACCAACTTAAAGATTCCCTA
ATTTTCAAAAAAAGGGGACCCCGCCCCCTCCTTTTGGTATCAATACCAAC
TTGACTTTTTGAAATTTGAAAAAAAAAATTCACACCAACCCCCGGCCCTG
GGTTTGGTATCTGGATCCTGACCCCCCCCCCCCGGACCAGTTGTTTGAAA
ATTTTGAAAAAAAATTTGAAAAAAAAAATTCACACCAACCCCCGGCCCTG
GGTTTGGTATCTGGATCCTGACCCCCCCCCCCTGGATGTACTGTATGAAA
ATTTGTATAAAGAAGTTGACAAATAATTGTGTCCAGTTGTGTCCTAGTAA
TGGTTTCTTCGCATGGTCTTTTTACTTTTTTGGTTAGATTAACTCATACT
GTCATAAACCAAACACCGAAGGTTACTCGTTTTTTAAATATAATCTCTGT
TTTTAAACCAAGAAAATACTGTTTGAATTTTTTGGCGGTTAAGTTTTGTT
GTAATAACAACGGTTGTTTCAAATTTACGAGAAAGAAAAGGGTTTATCTG
CCTTATTCATCGCGTTTGGAATTTTAAGACGTAGAGATTTTCTATTATGA
ACGACTCGTCATCAATGATATAAGATGTACAATCTCTCCTAATGTGCTTT
CATAAAATCCCCTTTGGTTAAATTTCTCGTGATGTACGTGTGCCCTACAA
GTAATAATACTAGATCCGTAGTTATTAAGAGTGAAAATATCATCGGGGTA
CTGTATCACAATTTCAAGGTAGAAAATCCGTCATGGAAATTGAACAAATT
CAAAGTAGTGTTTTGAACTAATGTTTCACTGGTCATAATTGTGTTTCCTC
TTTCTTACTTTTAAAAAAGGCACGAGGAAAGAGTTTCTGTTCTCAAAAAT
GAATTATATGACCAGATCACGAGGAAGTGGTACAACTCTGCCAAACGCAA
TATCAATCAAAACTAGTTATTAAAGCACCACGCGTTTAATTATAAGTACA
GAAATTATATGCCCTTGTTGTTGTTTTTTATCAACGTATAGATAGTCCCT
TGATTTGCTTACCGAGAGATTTGTGTATTTCATTGGCAGGTTATCGCATC
ACACCGTACCGTGAAATGAAGAAATCGAACCAGATGGCTGTCAGAAGATC
GAACTCCTTGAGACACAACATGAGATATAAAGATGAAAACGAAAATATGT
CTCGTAAGTCTCATTATTTCACTTACTCGTATTTAGGTATATTTCTATTA
AAAGTCTGCCTCCTCTGTTTAAACCAGTATTTTAACTAGAGTAAAGATCG
TTTAGCCATCTATTTCCACGCAAATTGCAAGGTCGTTGTTGGCTAGAGTC
TCGCTGGGTCTGTTGGTTTTCGAAGCAAGGGATTGGAGGTTGTTCAGCAC
TCATGACTTTTTAGTTCAAAATTTTACTCTTGTGAAAGTGTACAGTGTCT
GCTGTAACTAGATTGCTATAGACACTCAGGGTCGGCTTCATTCTACGCTG
CATGCAATCAACGAGTTGTTGAATTGTGCATGCAGGTATTCATCAGGCAA
TATGTAAATGATTGTTCTAAAGTTTATATTGATTCCGGATATTTTTTTTC
AGTATCAAATATTCGAAATTTAAAGAATGGTGCATTGCCTAAGGTATGTT
TTTACTAAAGTTCTCTTTATTTTGTATCACTTCACCTCTGCTAAATGTAT
CTTTTCAAAAGTGTGCAAAAACATGCCATGAGACATAAAAGGGATGGGGG
TACATTTTGACGAAGTTAATAAGGTTAACGATTTTTTAGCAATCTGTTTT
TTTTACCTTCATGTCTATAACTCTCTTGTGTCGATGAAAATTCATGGTTT
TCATCATATTTGTATTTTAACAATGTCAAGTTTACGGTCAATTTGTTTAC
AGCATGCACTGTCAGCACGACAAAGTGTGCAGCCAAGAATACGAACCACG
TCACGTAAAGAAGAACAGAAAAATAAAGAAGAATTGTAAGTGACCTTCAG
TTGTTTTTCACCATTTTCTATAAGAATTAATAACTATTGTTTATGTTCAA
GCGTTCTTTTCTTTGAGGTACTTTGAGCCTCAAGGTATTATAAATTTGAG
CTATTTATGATCATACCCTATGATTTTAAAATCTTGAGCGTTCTCAAGAG
TGAGACACTGCAGGTTCTGGGTTTGTTTTTTTGGTTTCGTTTCTAAGCCC
CATTGTTCTTACAAAGATTTTCTAATAAAAAAGTGTGCCAGATCCACTCA
CTCTTTGTTTGGCAACACTTTTGTCATTGCTAAACCTTGACAGTCTTGAC
AACCTTTGAAAATGCATTTGTTTTTAAGTATCTATTCCGTAACGCTAACG
GTATTTCTTGTCTTTTTTTATTAGATATCCGACGTCCGTCTTCGCAAGCG
ACTCTGAATCAGGTACATACTATTTTCTTCTAAATTCTTTCTCACACTGG
ACGTGTTCAAGTCGAAGTAAACAGTTTCGAAAGTTTTTTAGTTTTGAAGA
TAATTATAACCGCAATTAACTTTCTTAACCTTTTTAAAAGTAATAATCAG
CTTTAACTTTAACATGTAACAGATAGCCTTCTATAAAAAAGTTGTTTGCA
CGATTTCTGTGCTACATATTATGACTAACTAACTTGTTAAAAAGATATTT
TTTACTGGCTAATCTTAACCTTCTGTATCTGTTGTTTAAAAGTATACCTC
GTACTGATTCCAACTTTGTTCGTGTCTCTTGCAGATGACGAGAAGATGGA
AATGTTTTCAAACGAAGTCTAAATTAAAAACAAATTTAATCAGTTAAATT
GTAATTAAACTTAAAGTGATCATATTATCCGCTTCTAAATATTTTCAAAA
TAATGTACAGAAATAAGAGATAAACTTTGTAAATTTTAGTAAAAATGATA
TTATACTTTCGTTTTCTTCCTTCGCCACTCACTGTAAAGCATTCAGCAAT
CGTGCAAACACTTTTTTGGGGGAAATTATCATAGAAATACTTATTACGTA
CTTTGGAAATTATAATGTGCACGTTGCATTCTTCACAGGAGTGCGAGGAA
GAAAGTCGAAGAAAAAAGCCGCTAAAACTTTAAACAATACTGACAGTAAT
AATAGTAACAGTAAAACAATGGACATATACAGCACAGTGTGGTTAAGCGA
TTATGAATCGATTAAATCTGTCGGTAGTAAATCGTTAAACACGAGTGCTT
CTTCATTCACTGAGAGCATTAACATGTCCCACTCCACCCCTCGTCGTCCC
ATTGCTAACCAAACAATTAATATCCCTGTTGCTGGGCAATCAACTAAACA
ATCAAAATGGCGGACATTGAGTTTACCGGAGCTCGAAATGTCGACGTTGA
CGGGTGATGATTTAACCGAACGTTTTGTACGTTTACAACTTGAGCAGGAC
AATCGCGAATTACGTTCCACCGTTGATACGTTACAACAGACATTGGAACA
AGTCAAAACGTCCGTCTTCCCTTACGAAGCGGAATGCTGTGACGAATGTG
CGGATAGCAGAAACACACTGGATAGCATCTTTTACGAACTTTCTCATAAA
ATGCATCGTAAAAAGCAATTAGAATATCGTGATTACACTCCGTCTTTCGA
GCGAACAGAGAGTGGTTACGACACATTACAACCACAAGACTCCTCTCTTC
ATCGGCTTTCATCTACTTTTGACAAACAATCCAACCATTCTTTACTTTTA
TCCTCAACAGAGGAACACCAAAGTACCCCGGAAGATTATTTCCAATCTCG
ATTAGTCAAACGCCGAACTGCTCTTGCCAGTCATGACACTTCGTGCTGTA
TGGTCCAATGAAACACCTAAAATTTAAACCATAGGTTAAAATATATTTAT
AAATCTTAATTTATTATTTTAAACATTTAAATTATTTTCTTATAATGAAT
ATAACTTGCTAAATGAAATTAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002281XLOC_002281Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004093-exon-sc0000039-1575043694:21718..22475TCONS_00004093-exon-sc0000039-1575043694:21718..22475Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:18790..18889TCONS_00004093-exon-sc0000039-1575043694:18790..18889Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:16323..16436TCONS_00004093-exon-sc0000039-1575043694:16323..16436Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:15883..15923TCONS_00004093-exon-sc0000039-1575043694:15883..15923Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:15541..15623TCONS_00004093-exon-sc0000039-1575043694:15541..15623Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:15114..15151TCONS_00004093-exon-sc0000039-1575043694:15114..15151Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1575043694:13602..14791TCONS_00004093-exon-sc0000039-1575043694:13602..14791Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:21718..22475TCONS_00004093-exon-sc0000039-1510915933:21718..22475Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:18790..18889TCONS_00004093-exon-sc0000039-1510915933:18790..18889Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:16323..16436TCONS_00004093-exon-sc0000039-1510915933:16323..16436Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:15883..15923TCONS_00004093-exon-sc0000039-1510915933:15883..15923Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:15541..15623TCONS_00004093-exon-sc0000039-1510915933:15541..15623Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:15114..15151TCONS_00004093-exon-sc0000039-1510915933:15114..15151Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1510915933:13602..14791TCONS_00004093-exon-sc0000039-1510915933:13602..14791Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:21718..22475TCONS_00004093-exon-sc0000039-1491911889:21718..22475Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:18790..18889TCONS_00004093-exon-sc0000039-1491911889:18790..18889Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:16323..16436TCONS_00004093-exon-sc0000039-1491911889:16323..16436Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:15883..15923TCONS_00004093-exon-sc0000039-1491911889:15883..15923Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:15541..15623TCONS_00004093-exon-sc0000039-1491911889:15541..15623Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:15114..15151TCONS_00004093-exon-sc0000039-1491911889:15114..15151Clytia hemisphaericaexon
TCONS_00004093-exon-sc0000039-1491911889:13602..14791TCONS_00004093-exon-sc0000039-1491911889:13602..14791Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:13602..22475 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.407698	0.104065	0.597764	0.467855	10.263	8.05429	34.6712	36.5634	3.31142	2.63288	16.3995	13.862	11.2441	7.64867	8.85474	22.4397	15.0258	15.7601	1.21808	0.916257	9.96146	11.9487	6.562	8.49748	7.07201	12.9972	2.90922	1.09936	0.518705	0.414531
Blast
[Close]
BLAST of TCONS_00004093 vs. Swiss-Prot (Human)
Match: DCX (Neuronal migration protein doublecortin OS=Homo sapiens GN=DCX PE=1 SV=4)

HSP 1 Score: 164.466 bits (415), Expect = 2.597e-44
Identity = 97/227 (42.73%), Postives = 139/227 (61.23%), Query Frame = 3 
Query:  216 AKQVKFFRNGDQYFSGLRLAVSIDRYKEFESLLTEL----SSKLNLPTGAVRYLFNADDGSLVSDVSQLQNGISYVCSSSASFRQIEGGYGKLV-PNWS-NIKRSRNIYRPLKVLGNIENSFRLDSSKDFIKPKLVTVIRNGKPPQRKVTLLLNNKTAISLDQVLDQLSAKGSL--GKVDKLHTTSGKPIRALRDLFDDTTVFIALSTNE-KFPDDGIELDPNSYRI 869
            AK+V+F+RNGD+YF G+  AVS DR++ F++LL +L    S  +NLP G VRY++  D    +  + +L+ G SYVCSS   F+++E  Y K V PNWS N+K S N+  P  +  +  NS +   +KDF++PKLVT+IR+G  P++ V +LLN KTA S +QVL  ++    L  G V KL+T  GK +  L D F D  VFIA    + ++  D   LD N  R+
Sbjct:   52 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVE--YTKNVNPNWSVNVKTSANMKAPQSLASS--NSAQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRV 273
The following BLAST results are available for this feature:
BLAST of TCONS_00004093 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCX2.597e-4442.73Neuronal migration protein doublecortin OS=Homo sa... [more]
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