TCONS_00004088 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004088
Unique NameTCONS_00004088
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1688

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004088 ID=TCONS_00004088|Name=TCONS_00004088|organism=Clytia hemisphaerica|type=transcript|length=1688bp
TGAAGAAATTGAagattcaaaacattttcataaaaacCAAAAGATGAACT
GCTAACTTTCTGTATTCTTCTACGATCATCCTTAGTTGCGCGACCAcaaa
attctctcaaaaattaatgaatgaaaaaagaatcaaaaaaagaagaaata
aatcaaaactttcttCTTCGGCATGGAATCTTCTTCAATCTATCATACCG
AAGATCGGGATAGGAGCGGCGGAGATCTATCCGATGCAAGGACACTTATT
CAGAATTGTGAATACGATGTATACTCGATGTTCggaataaaaagagaaaa
acattcGGTCCATAGCCAATACAAAATTGGCAGGATCATCGGGGATGGCA
ACTTTGCTATCGTTCGGGAATGCAGGGATAGaaaaacacAAAAGCCATTT
GCCCTGAAAATCATCAACAAAGCCAAAGTCAAAGGAAAGGAACATATGAT
CGAAAATGAAATTCTTATTTTACGGAAAATTAGTCATCCCAACATTGTCA
AACTTCACGAGGAATTCGAAACACCCAAAGAAATCTATCTCGTTATGGAG
CTAGTACCGGGAGGTGATCTGTTCGACGCCATTGTAGACAACACACGTTT
CTCTGAGCCTGAGTCCGCTTACATGGTCCACGATTTAGCCTCTGCTATTT
TATATTTACACGAACTGAATATTGTCCATCGTGACGTCAAACCAGAGAAC
TTATTAATCGTCAACCGCGAAGACGGTCGAAAATCTATTAAACTTGCAGA
CTTTGGACTTTCTATAGAAGTCAAATCTCCCATGTTTTTAGTATGCGGTA
CTCCCACTTATGTAGCACCGGAAATCCTGGATGAATCCGGGTACGGCCTT
GAAGTGGACAACTGGGCCATTGGAGtgatttgttatattttattgtGTGG
TTTTCCACCTTTCCGCAGCACCAATCATGATCAGgaagaactttttgata
aaattttacgAGGAGATTATGAATATTTGAAACCTTTTTGGAATGATGTG
GGAGATGGGCCAAGGGACCTAATAGACAGGCTACTTGTGGTCGATGCAAG
TGAACGATATACTGCTAAAGAAATCCTTCAACACTTCTGGATAAAGAAAT
GGACAGAACCAGTGGAGAAGATACATCGAGAATTATCACAAGCGGAAGAA
GCCAACATGAAAAACAGGAAGCGTCTGCGTGGTATCGCTCTCGCTATCCA
ATCGGATTTGAAGAAGAACGAATCATACATCACCAACAACAATTGTCCAA
CGTCACCAAGTACCAAATATGGTTTCGTATCTGCCACGCCCAATACCAAA
AAGACAGTCAGGCGTGTTCGTTCAACGAGCTCTTCAAGTTcacaaaaaca
attttattactCTGACGGTGAAGATGAGGACGAAGAACACATCACCGAGA
ATGAAAGACCTTCTTCTGATAAAGAGGACCATTTAAATGATATGGAATTC
TCGAACTTANAAAGACCTTCTTCTGATAAAGAGGACCATTTAAATGATAT
GGAATTCTCGAACTTATTAAGGAGACCAAGACCGATGTCTTTTCCTTACG
CCTTGAACGAACCACCAGATGAATTCGCCAATTTCCGTTgaagtgtttgt
tttgatgttgtatTGCCAGAGATATTCCGTTGTCCTGTCCCCTGGATGAA
TGAGATGTGTtggtgttttttgaaaaataggatGACAA
Run BLAST on NCBI

transcript from alignment at sc0000039:1..7949-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004088 ID=TCONS_00004088|Name=TCONS_00004088|organism=Clytia hemisphaerica|type=transcript|length=7949bp|location=Sequence derived from alignment at sc0000039:1..7949- (Clytia hemisphaerica)
TGAAGAAATTGAAGATTCAAAACATTTTCATAAAAACCAAAAGATGAACT
GCTAACTTTCTGTATTCTTCTACGATCATCCTTAGTTGCGCGACCACAAA
ATTCTCTCAAAAATTAATGAATGAAAAAAGAATCAAAAAAAGAAGAAATA
AATCAAAACTTTCTTCTTCGGCATGGAATCTTCTTCAATCTATCATACCG
AAGATCGGGATAGGAGCGGCGGAGATCTATCCGATGCAAGGACACTTATT
CAGAGTAAGTATAGAGGGACATCTCATGCATCCATCATTTACCAAAAGGA
ACCATCAATCAATCTTCAGACTTCCTTAGAGATCTGCCATTAATAAATGA
TTAAACTTTTTGTCAGTTATAATGACCCCCATTGACAATAACACACATAG
AAACAGTCCTAATTTAATTTTTTTTAGCATTAAATTGTTACTTTTAAACT
TAAAACTGTTATAAAAGCTCCTAACTTATTTATTTTAGTTTATAGCTGGT
ATGATAAATCAGTGGATATCTTCAAATTGATGATAATAACCAGTGAAATA
TTTTGTTGAATTCATTGATTTCTATAAACGAATGACACAGTCATTTCCTC
TAGCATTGTGACATAACTCATTTAATGATTAATAACTCCAACCCTATTAA
CAGCTTAATAGAAGCATCAACTGTTTAAAGTAGTGAGTGATAAAGAAAAT
CATTTGATTGCAAGCAAGCAGTCTGACGAAAAGTAGCGTAGTGATCAGAG
CACTTTTTCCTTGTGAACTAAAATTCGACTCTTGAGAAAAATCAATATTA
TTTTTAGCGAACTTTTTCTTTTGTTTTGGTATTGCGATATAAGTGCTGTG
TGTGTTGAACAGATTAAATGATTTATATACCATGTTTTATCTTATACCTC
TTGTCATTCGATTACAGCATCTCTCAAAAACATGTCTTAGTGTTCAAAGT
GAAACATTTTGACCAAAACAGATTTCGACTTATCATTTTTCTCATACTTT
CTTATCTTTCAGATTGTGAATACGATGTATACTCGATGTTCGGAATAAAA
AGAGAAAAACATTCGGTCCATAGCCAATACAAAATTGGCAGGATCATCGG
GGATGGCAACTTTGCTATCGTTCGGGAATGCAGGGATAGGTAAGTCAAAT
TATACCCCTCAAAAGTTGTTTCATTTTATTTCTCGTTTTTATTGTGGTTT
CATGTTGATATTTTGAATTTGTATTTTCTTCTTTTCAGAAAAACACAAAA
GCCATTTGCCCTGAAAATCATCAACAAAGCCAAAGTCAAAGGAAAGGTAA
GTGTACCTACATCGAAAATACTCAATGTGGGTCATCAAAACAAAAGAAGA
ATACTTTTGAAAATTTTGCTCAATATGGGTCTTCATAACAAAGCAAACTT
TGTGGATTTTACTCAATGTTGGTGATCAAAACAGAGAAATCTGCCTGAGA
ATGGTTTGGTCAATGAATTGAATTGTGCGTTTTTGTTTCTTTTAGGAACA
TATGATCGAAAATGAAATTCTTATTTTACGGAAAATTAGTCATCCCAACA
TTGTCAAACTTCACGAGGAATTCGAAACACCCAAAGAAATCTATCTCGTT
ATGGAGCTAGTACCGGTAAGAAAAGAAGAGTTTTTTGTCATATTTGTCAC
GTAGGAATTAAAAAAAGCTCTAAGCTCTCAAACATACGTCTGTGATTATT
TTGATTCGTATATTTTCTCAGATGAATAGCATTATAATTTGTAATCCAAT
TTTTCATCGTGATGATTATTCTCTACTCTTCTTTTCAGGGAGGTGATCTG
TTCGACGCCATTGTAGACAACACACGTTTCTCTGAGCCTGAGTCCGCTTA
CATGGTCCACGATTTAGCCTCTGCTATTTTATATTTACACGAACTGAATA
TTGTCCATCGTGACGTCAAACCAGAGAACTTATTAATCGTCAACCGCGAA
GACGGTCGAAAATCTATTAAACTTGCAGACTTTGGACTTTCTATAGAAGT
CAAATCTCCCATGTTTTTAGTATGCGGTACTCCCACTTATGTAGCACCGG
AAATCCTGGATGAATCCGGGTACGGCCTTGAAGTGGACAACTGGGCCATT
GGAGTGATTTGTTATATTTTATTGTGTGGTTTTCCACCTTTCCGCAGCAC
CAATCATGATCAGGAAGAACTTTTTGATAAAATTTTACGAGGAGATTATG
AATATTTGAAACCTTTTTGGAATGATGTGGGAGATGGGCCAAGGGTATGT
TTACATTGTAATTGGCTTTGATGCCTTATTTCGAACTCTATATTCGTTCC
GACTTCACTAATTTCCATGTTTTATTTTAAGCTTTGGAAATTTATATTCC
AAATTTTCCGCTTAGGCTTACATTCAGACGTTTGGTGATAATTTGTTGAC
TTTATATTTTGCAGGACCTAATAGACAGGCTACTTGTGGTCGATGCAAGT
GAACGATATACTGCTAAAGAAATCCTTCAACACTTCTGGATAAAGGTAAG
TTTTCTTCGTGACATCACCTAATCAATCATTTAAGTGAGAAGAATAGAAA
TAAATCAAGGGTAACATTCAAGTAATTTNGGATAAAGGTAAGTTTTCTTC
GTGACATCACCTAATCAATCATTTAAGTGAGAAGAATAGAAATAAATCAA
GGGTAACATTCAAGTAATTTTACTTCAGTAATTTTCTGTTTTTCGTTTTA
GAAATGGACAGAACCAGTGGAGAAGATACATCGAGAATTATCACAAGCGG
AAGAAGCCAACATGAAAAACAGGAAGCGTCTGCGTGGTATCGCTCTCGCT
ATCCAATCGGTAATCTCTTTACTTCATCTTGTGCGTTCTAGAAATAATTC
AACATTATCTTCTTCTCTTCAACCAGAAGATGAAGATTCAACTTCCAGAT
CTTCACCACAAGCGAGTAGCCGCATTCCGCGCCCTACTTCAGCTTCATCT
AGTCCTAACGTCACCAACTTTCGAAAAGGCACTACCACTCCAGTCAAGCG
ACGTGGTATTTCGTCTGCTGGGTCCAGGCGAATCCCCTACGATCAACCGG
ATTATTCTCTTAAGAAAGGCTTCTTGAAACGAGAGGAAAAAGTCGATACG
GGTACTTTAAAGAAAAAGAAAGTTGCAGGCCGAAGTAAGATTTCAGTACC
GACCACACCTGTACGTAAACCAAAAACTGTCAAACCGGCCGCAGAACCTT
CCTTAGCTGTGACTTCCTTCAAAGATAATCAAGTACGATTCCGACCATGT
TCAGTCATCGATATCCGAGTTGACGTGGAAGTCACAGAGCGACCTGAACG
ACCTGGTAGTGCCCAAGGGTACCGAAAAAAACCAACAGATACGCGCAAAG
TAAAAGACACTATAACATCAGTGAAAGAAAAGACTGACACCAAAGTGAAG
AAGACTCCAACAACAACCACCGTCGAGAAAACAGAGGTGAAACTTGTTTC
GAAATCTTCGTCTGATAACATTGTTGGGGATTCGAGTGGAGTTGCTTCCA
ACGGTGTGAAACTACGTAAGAAAACGTCGCGTACGACACGTCCGAATACC
ATGTTAGAGTTAAGTACTTCCGCAGCAACGACCAAAGAGAGCGCCGTAAC
TACGTCTTCGAATAAACAGAAAGATGTGAAAGATGTCAAGGAAGCAGCGA
AGAATAACATCTCTTCCGCCAAACGATCGCGACCAGTAAGCCTAATGATC
AACAAAGAGAAAGCTTCCTCGTCAAGAAAATCTTTAACACCTTCTACTGA
AGAATTCAACAGGAAACGAATGCAATATCGCCTGAACGACCAATTACATT
CCCTTGATGAAAATATTAAACAAGATAACTCAGGACGCATGTCTCCTAAG
AAAAACTCCAAATTCAATTTATCGAATTTAAGTTCGCCTCGTTGTCGCTC
ACCTACCAGGAAAAAAGAAACAACATCTGCAAAATCTACAAAAGAAAATA
GACCTGATGCAAAACCTCTCCCTGTTCGACCAGCAAGCTCTTTAGCTACC
ACGAACAGAGATCGCTCAAGTTCACTTTCTCGACGTACTCCTAAAAACGA
AAGGTCACCTATTCGTCCGGCTACTACCATACCGCCTTCTCCAAAGAAAA
CAATAAGAGAACGTTCAGCGAGTGGCAATCGCTCCACCATCACCACAAAA
CGAGCAACCACCATAACCACGCCGAAAAACTCAGCTACAACACCGAGCGT
CGGCTCTCCCAGCACAGCCAGAAAGCCGAAAAGCACACCAACCAAAGTAG
GAACATGGAACGTTGGGACAGCAGTCCAATATAAAGCCCCAAACAGTCTC
CGTAAACCTTTATCCCCTAAAAAAACAGTGAACACAAAAACAACGAATAG
TCCGAAGCATGTTCGACGGAAAACGAGTGAAGCGGGGAAAGTCCGTATTA
CCACTGAAGTGAATAAGAGAAAAAATATAACCTTCCCGGACGGTAAGAAA
GTAGATAAAGAGACCAATACAAAAACAACCGTCTCTGTAGATATGAATGA
TTCAGAGGGAGATAAAACAGTGAAACGAGCTTCCTTGCTAGCTAAAGTGA
AAACACTTGCTCAAGAGATTGGTTCATTATCGAAACTTGAAACAGGACCT
GTATCTGAGAGTTCTTCAGACTCCATTCAAGGTGTAGGAACACCTGTTCG
TAGTCATAGTGACGTCATGGAAAGTGTCATTAAAGAAGATACTGACCGTT
TCAGTGAAACCGAATATTTATCTTTGTCCGAAAAACCCTAAATTTCGTCC
GAAAAATGAAAGCGTATTATTGTAAATGAAGTTAGAATATATTTTTATAT
GGTAGTTAACTAACATTGGTAACAAAAATTCAAATCTTAATTTTCATCAT
TCTCTTCAGACAGACAGTCGAACCCAACCCATTTTTCCGTCTTATTTTGG
AGTTTTTCCTATTTTTCAAATCTTATCTTTTTCAATTTTTCATTTCATTT
TCTCACTTCAGCAAGATGGATTTTTCTCTTTTATCTTCCCTCTGCATCAT
TTGCACCTTTTTTTCATTTTATTGGAAGAAAAAAATATGGGATAGATTTT
GATCAAAATGAGTTTTCCTCTTGTTTTCTGTAAAACATGACCAATTTTGG
ATATCGAGGATGTTTTTTATTGAAAGACTCGTTTTCAGCGATTACTGAAT
TCTACAAGATATTAAATTTTCTCATAATGAAAAAATATTTGAAATGAAAA
AAGAAATTTCGGCAAAATGATCACACATGAAAGAATACAGCTGTCTTTTC
TCAGACGTAAACATTGATCGTTATCTCTCATGAAACCATTTTTTCTGATA
CCGTTTCTATGACGAGTTGTTAATGCGGTTTCAATCAAAGTCTTACCGCA
AAATGACGTATGAAAAACATTGTTCTCGCATAACTAACCCGTCAAATCAT
AATATATCATTCAGCGAGGAAGATCACACTCAGATATTTTCATAATACCA
CCATATTATAGAAAATTTCACCCTTTATAAAAATCCCACTGTGAAAAGAA
AAAGTCAAAAAATACGCCGCCTTCAAGATGAGAATATTACTGAACAGTCG
ATTGACCATTCATCGTATTTTTTCACCGCTTGACCTTGATTTTTTCTGTT
GCTTGAGTTTCATAGGCCTTTTCGCATTGTTATCGATGTCATAAAATATT
TACTAGACCTAACCCCCTTTTTCGCTAATTTCAACACCCACAATATTTAC
GAAACACTGATACCCGACCAATATTATTGCCTTTGAGATGTTTTCAGAAA
TCACAAATCTCAATGCATTTACACCGGATGATGTCAATTAAGTCGTCATA
TAAATGCCACTCAAAAATATTCAAAACAAATATTTGTATCGTAAATAGCT
ACGTAATTTGCTTCTCATCAATCAAACTAAATATCACACTAATATACAAA
ATGAAGAGTGAATTTACAACAGCTTAATTGATTAAAACATGATTAATGAT
GGATCACCCGACTCATTGTTTTATACTGTACATTTCCAATATTTTTACCT
TAACCTTTCAACGCTAACTTTTTTGAAAAAGGCCAGAAAATTCATAATTT
TTTTTTGGAAATTTATTCTTTTAAAGGCCATTTCTTGACCAGGACAAATG
ATTCAGGTATCAACTTTGGTATCGTTGGAAAGCTCCTGCTCTCAGCTACA
AAAAATAGCTGATTTTATTTTTCTGAATCTCAGGTGGTCAGGAGTTATGA
CCAAAAGACTGTGTATCGGTAAAATGACCTTTTCAAAACGTATATATACG
ACTTTCGCCGTCTAAGGGTTAAAGAACTATATACTTTCTATCGAAATTTT
ATGTTATATCTCTTTAGCCTCAAAACCGGCCATGCCTCGCTAGGTTAAAA
GAACTATATCTTGGATATTCAGCAAATGAGAACTTAAATATCCGTAACCA
TGGAAACAAATTTTGTTAAAAATATTTGATTTTTTTCAAATTTTTTCAAA
AATTCAGTTGTTTTAATAAAAAACTTTTTGAGTAAGATTTTCAAATCTTT
CTTCCGATATTTGAAAATGTATTTCATAGTTTACTAAAACGATTTTCGCG
ATACCCTTTTACCTGAGTTTTATCGGTTCCTCAAAGATAAAAAGGATAAA
AACGTCTTTCTTCAGACCTACATGGCTGGATTTAGTTAAAGTAAGCCTAG
GGGAGGAGCGTATAACTATAAGCAGTTCTATTTTGCTATAATTAACCTTC
CTTTCCCATATCCAAGGAAGGATATGGACCTCATTGGCTACCTGGCATCA
GAGAAAAATCATAGAGCGAAGTTGTACGTCGTACACATGTATGGTTGAAA
TATTCTTCCCGTCAATCCTAATGATTTTATCACACTCTATGTTAGAGGCT
GTGTTGTACTCCTGCTAAATCTGCATTAAAATAAAACTTAAGTGACAAGC
TTTTAGCAGTTGACCTCGAAATCACAACACACACTGTTCACGGTTTAAAA
ATCTCAGACCTTTTATAAAGGCACACATTCATTGTCAATTTTTATTTTTC
TCCGAAAAGCAGTCTAGATCAAAAACAGGGGGGGGGGCTTATGAATACCT
TTTCCAAGATTTTTGTTTTTTTGTCTGCATTGATCATCTCTTTTCATACA
TTCTAATAGTTCTAATTTCGGTCACATTTTCCGGACGATATGAAATTTGT
AAACTAATTTTTATCTTAACATTATTTTCATTGATTTTATTATTAATTTA
ATTCCTATTATTTGATACTCTCAAGTTTGACCATTAACATGCATTAATAA
TTTTTTGGGGAAACCTGTTTTCCAATAAGCGGACAAGGGCGCACCTTTTT
AAAATGATCTTAATATTTGAAGTTCCTACCAAGTGTTGAAAGAATAGCTG
TTTATATTCTCAACCTACTTTTGTTAGATCAAAACAATTTTTCCCCAAAA
AGGAGTTTTTTTTATCCAGCCTCTCTATAGAAGCTTGAAATTCTTCTTTT
TTCACTCACATTTAGGATTTGAAGAAGAACGAATCATACATCACCAACAA
CAATTGTCCAACGTCACCAAGTACCAAATATGGTTTCGTATCTGCCACGC
CCAATACCAAAAAGACAGTCAGGCGTGTTCGTTCAACGAGCTCTTCAAGT
TCACAAAAACAATTTTATTACTCTGACGGTGAAGATGAGGACGAAGAACA
CATCACCGAGAATGAAAGACCTTCTTCTGATAAAGAGGACCATTTAAATG
ATATGGAATTCTCGAACTTANAAAGACCTTCTTCTGATAAAGAGGACCAT
TTAAATGATATGGAATTCTCGAACTTATTAAGGAGACCAAGACCGATGTC
TTTTCCTTACGCCTTGAACGAACCACCAGATGAATTCGCCAATTTCCGTT
GAAGTGTTTGTTTTGATGTTGTATTGCCAGAGATATTCCGTTGTCCTGTC
CCCTGGATGAATGAGATGTGTTGGTGTTTTTTGAAAAATAGGATGACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002281XLOC_002281Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004088-exon-sc0000039-1575043694:7696..7949TCONS_00004088-exon-sc0000039-1575043694:7696..7949Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:6811..6937TCONS_00004088-exon-sc0000039-1575043694:6811..6937Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:6654..6711TCONS_00004088-exon-sc0000039-1575043694:6654..6711Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:6335..6454TCONS_00004088-exon-sc0000039-1575043694:6335..6454Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:5706..6161TCONS_00004088-exon-sc0000039-1575043694:5706..6161Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:5455..5535TCONS_00004088-exon-sc0000039-1575043694:5455..5535Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:5141..5248TCONS_00004088-exon-sc0000039-1575043694:5141..5248Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1575043694:1..484TCONS_00004088-exon-sc0000039-1575043694:1..484Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:7696..7949TCONS_00004088-exon-sc0000039-1510915933:7696..7949Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:6811..6937TCONS_00004088-exon-sc0000039-1510915933:6811..6937Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:6654..6711TCONS_00004088-exon-sc0000039-1510915933:6654..6711Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:6335..6454TCONS_00004088-exon-sc0000039-1510915933:6335..6454Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:5706..6161TCONS_00004088-exon-sc0000039-1510915933:5706..6161Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:5455..5535TCONS_00004088-exon-sc0000039-1510915933:5455..5535Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:5141..5248TCONS_00004088-exon-sc0000039-1510915933:5141..5248Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1510915933:1..484TCONS_00004088-exon-sc0000039-1510915933:1..484Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:7696..7949TCONS_00004088-exon-sc0000039-1491911889:7696..7949Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:6811..6937TCONS_00004088-exon-sc0000039-1491911889:6811..6937Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:6654..6711TCONS_00004088-exon-sc0000039-1491911889:6654..6711Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:6335..6454TCONS_00004088-exon-sc0000039-1491911889:6335..6454Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:5706..6161TCONS_00004088-exon-sc0000039-1491911889:5706..6161Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:5455..5535TCONS_00004088-exon-sc0000039-1491911889:5455..5535Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:5141..5248TCONS_00004088-exon-sc0000039-1491911889:5141..5248Clytia hemisphaericaexon
TCONS_00004088-exon-sc0000039-1491911889:1..484TCONS_00004088-exon-sc0000039-1491911889:1..484Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:1..7949 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.19976	2.90084	10.5682	11.4	4.54125	6.01877	3.57694	5.47953	3.5937	5.5709	0.478054	2.62403	8.57809	1.01411	4.12606	4.78732	9.87299	6.92354	0	4.44223	7.2728	8.42407	1.93641	1.20725	0.942716	2.55102
Blast
[Close]
BLAST of TCONS_00004088 vs. Swiss-Prot (Human)
Match: DCLK3 (Serine/threonine-protein kinase DCLK3 OS=Homo sapiens GN=DCLK3 PE=2 SV=2)

HSP 1 Score: 353.984 bits (907), Expect = 6.215e-113
Identity = 156/263 (59.32%), Postives = 211/263 (80.23%), Query Frame = 2 
Query:  305 SVHSQYKIGRIIGDGNFAIVRECRDRKTQKPFALKIINKAKVKGKEHMIENEILILRKISHPNIVKLHEEFETPKEIYLVMELVPGGDLFDAIVDNTRFSEPESAYMVHDLASAILYLHELNIVHRDVKPENLLIVNREDGRKSIKLADFGLSIEVKSPMFLVCGTPTYVAPEILDESGYGLEVDNWAIGVICYILLCGFPPFRSTNHDQEELFDKILRGDYEYLKPFWNDVGDGPRDLIDRLLVVDASERYTAKEILQHFWI 1093
            +V   Y+ GR+IGDGNFA+V+ECR R+T++ +A+KII+K+++KGKE M+++EILI++ +SHPNIVKLHE +ET  EIYL++E V GGDLFDAI+++ +F EP++A M+ DL  A++++H+ +IVHRD+KPENLL+   ED   ++KLADFGL+  V  P+F VCGTPTYVAPEIL E GYGLEVD WA GVI YILLCGFPPFRS   DQ+ELF+ I  G +E+L P+W+++ D  +DL+ RLLVVD  +RYTA ++LQH WI
Sbjct:  351 NVEKHYETGRVIGDGNFAVVKECRHRETRQAYAMKIIDKSRLKGKEDMVDSEILIIQSLSHPNIVKLHEVYETDMEIYLILEYVQGGDLFDAIIESVKFPEPDAALMIMDLCKALVHMHDKSIVHRDLKPENLLVQRNEDKSTTLKLADFGLAKHVVRPIFTVCGTPTYVAPEILSEKGYGLEVDMWAAGVILYILLCGFPPFRSPERDQDELFNIIQLGHFEFLPPYWDNISDAAKDLVSRLLVVDPKKRYTAHQVLQHPWI 613
The following BLAST results are available for this feature:
BLAST of TCONS_00004088 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCLK36.215e-11359.32Serine/threonine-protein kinase DCLK3 OS=Homo sapi... [more]
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