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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004053 ID=TCONS_00004053|Name=TCONS_00004053|organism=Clytia hemisphaerica|type=transcript|length=614bp
ttacaaaactttaaaacatgAAATAACAAAGAAGAATGATGATTGTTGGT
GAATATGTTCATACGAATTTATCATCGCCTTCATCATCTTCACTGCTGCT
ACAACAAGTGTCACTGTATGAAAGAAAATTAGGCACAACATCTCGTGCCC
TCCTATCAAAGCTCACAACATCTCGCGCCCTCCTATCAAAGCTTACAACA
TCTTGTGTCCTGCTCTCGAAGCTTGTCAGACCATTGGATATTTGATCATG
CCAACCAAAAGGTTTCTCCCTGAATCAGTACGCTGGTTGAATGCCAACGG
AAGATCAGAGGACGCAGAAAAGATTTTACACAAAGTGGCAAAATATAACA
AACGAACAATTGAGAATGTTTGTTTGAAACAAGAAGTTGAAGATCAAAGT
GGATATTCATATCTTGATCTTTTCAATACAAGAAAAGTTCTGAAAATCAC
ATTATCACAGGCCTACATTTGGGGGTGTCTTGGAATGGTATATTATACAT
TGTCATGGGCGTTTGCAGATCTGGGAGGTGACATGTATCTGAATTTCATT
TTGGCATCGATTGTGGAATTACCGATGCACGCTGCTTGCGTTATTTGTCT
ACAAAGtttcGGAC Run BLAST on NCBI transcript from alignment at sc0000039:580172..594140+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004053 ID=TCONS_00004053|Name=TCONS_00004053|organism=Clytia hemisphaerica|type=transcript|length=13969bp|location=Sequence derived from alignment at sc0000039:580172..594140+ (Clytia hemisphaerica)
ttacaaaactttaaaacatgAAATAACAAAGAAGAATGATGATTGTTGGT
GAATATGTTCATACGAATTTATCATCGCCTTCATCATCTTCACTGCTGCT
ACAACAAGTGTCACTGTATGAAAGAAAATTAGGCACAACATCTCGTGCCC
TCCTATCAAAGCTCACAACATCTCGCGCCCTCCTATCAAAGCTTACAACA
TCTTGTGTCCTGCTCTCGAAGCTTGTCAGACCATTGGATATTTGATCATG
CCAACCAAAAGgtttgtgattttttatttcgtttgTTTCTAAGGGTGGAG
GAGAGTATTCTCGGTCCCAAGCCCCTTGTTCATCCTCCTCGTAAAATTCT
CCTTCGTATTCTATATTATGATATAAATGTTCTtcgattttctgaaaatg
cttaTTCTCGTAAACAGATTCTTTTCGAACTCTTTTTAATTGTTGCTGAG
AAACGCTCCTCAATGGCGACAAAAACACGTCATCGTCGTCCAGGTTACCA
AGGTGATTATTTTCCATGATGGGAGAGAAGTAGTGATCATCATATTGCTG
ATGATAAACATCCTCATGTTGTCGAATGTTTCCGTTCGAATCGAACATTT
CTGAAGAATTTGCTGAAaacacaaaacttttcaaagaatcgatGACGCTG
GTTTTTCTCTGCTTCTCTGGAGAGTTTGGATACTGGTTACTGTTTGATAG
ACTCCAATTAAACACTTTTGACATATGAGTGTTATCCCATCGCTCTGGTA
AGCTCATCTTCTTACGAGACCTGTCTTGAACCACTTTGTGATTTTGTAGA
TCACCATCATCTTTCTCCTGATCTTGCAGTTGATCGAATATTTTCCTGTA
TTGACTGTTCTCCTCAGCGTTTCCTTGTCTTTTCAATTCGTTGAGAGATA
TAAGGCGATGTTGGCGAAAGAGTGTTGGTTGTTGACAGGTCGTTGTTGTA
TGGCGTCGTGTATTTTGTTGAGAGGTCCTCCcttcaacaatattttcatc
TTTCGTAACATTTTGTTGAACTGGTATTGATTGTTGTTTCTTTTGGTGAA
CTTCTTTTAATCGCTCTTTATCTCGTTCTGAACGAATATCCAACAAATTA
TGTAAAGGATTCAACGTGTTATTGTTATTGTTGCAAGTTTTTCTCTTACG
GTATCTTTCAATAACTATTCGTGGCATATACTGATCAACAAATTTGTCGA
GAACacttttttctgtgttttgtaCTGTATTCCATCTCGACTGTAAAGGT
TGTTGTGAGGTGTGACTTTCAGAGATCCCAGAATCGAAACTTTCTTTATT
GATCGAACAAGCTTCTTTGTATTCTTTTATCCTTGCCAACCGTCTTTTTT
CCTCCTCCTTCAAAAATTTATCCTGTTCACGGAGCATCCGTCGTTGTCGA
CGTTGCACGCCGCGGCCAACATAACAAGCTATGCAGACAGGTATTCCAAT
AATGGCAGCCAAGACTACTATAGGAGCGACTGTTTTCAACCATTTCAGCT
GGAGATGAGAATCTTTTGGTTTGCTCTCTTTACAATCACCATAAAGTGTC
ATATTGACGTATGTAACATCCATCAAAATTGATAACTCTGTTTTGAATCT
TTGAGAAACTACCGACTCATCAAAAAGTCGATTGCGTAACTTTTCGATCG
CGTCACGATTGCATTTTTTTCCATTGTCGATATTTAGGAACGAAAACTTC
AAACATTTCTTTGCGAACTCTTTGATTCTGACATTTTCGATTTTCGTTTC
CATTAGCCTATCAGCCAAAATTTTTACTAAAGCATATCGAGTATCCAGTC
TATTCATGAAATTTTTAGCAGACAAAGTTCGTGTACATACTTTGATTTCG
TGTAAATCGTTCACGAAAGGTGACGTCACGAAAATTTTTAGCTCTCTGTA
GCTTCGATAATTATTGGATAAGACTCGAATGAAATAGGTGGAAACTCCTT
CGTTTCCTTGCAGAGGAAAACCATAAATTTCATTGCTAGCCCATTTATAT
TTCAACCAAGTGTTTGAGAAAATGGGCTGTTTATCTTCCGTCAGAAGTTC
GTAGTAAATATTCCCAGCGTGATCTCTGAGAAATTCTAAGGAGTGGATTT
TCTTGTAGAATGCTACACCCACTGTGACGTGAAATTCTTCCACCTGGCAA
TGAACTTCATTTAAAACGACCACCAATACTAGATATACACCCCAACACTT
CATTCTCGAATGCTTTGGTGTGTTTTAAAGTCCTAATGAAGAGTTTCGTA
GATTATACTAGTTTTGGATATTTAAGGAGACCTTTGGTTGATTAATTTTC
ATCTTTTCTATTATCCTTTCATTCTgtatttcatttgttttgattttgcc
gATTCATTTCTTTTTAAGCCGTGATTAGATGATAATCAGTATTTTATATG
TTTTTcgtttgaattttattttgaggGTTGTAATGAAACTATTAAGCCCT
TTGTACATATCAAAACTGATTTTTAGGCTTTCCTAACTGTTGCACTGTGA
CATTTGAGGTTGAGGGTCCCAGAGTACCAGACACTTTGTATTCCATTTCT
CTCCCCTGGTACTGTTTGGACACCCTTTGGACACAGTAGgccttttttaa
atgaaaattaagCTTTTTTTGGAAGTAGATGTGAGGTTTTAAAATACTTC
TACTCGAAATTTCTTTTTACAAGTGAATAATCCATCATTGTAAAACCCTT
GAAATTCAGGTACTAGGTTAAGATATAATCAtgttaaaaatacattttca
atgtattgaaaataaagataaatttCCCCTATCTATACTAAAACTAGGAG
AAAGTGTCCTATTTGTTGTCTAAGTTTTTGACACACTGTGGTACTATTAA
GGATTCATCCCATTTAAGTCAACTACATATCTTAGAAATTGTTGAGTCTC
TTCTTTTTTCGGGAAAAGTCTTCGACGTTACTGAGTCTAATAGCTCTTGT
TTGTTCATGCATGTCACAAGGAGTTACTTCAGACAAATACCTCTCCCTAA
attcaataaacgccccccccccaaaaaaaaaaaaatccttcgTAGGAGTT
TATTTAATAACAGCCCTTTCTTTTcgcccccttcgaataaacgcccctct
taaaataaaaatattaggtgtttattcgaagtaatagaTTACTCATTCTC
TCGATTTGCTGactgaaaagaaaagaacggcaagttttttcaaaatatga
aaaacgcCCATGGGCGTGGTGGTACAGGCAAGATTCGCTCTTACTCTGAC
AGTATTTGCTACCCAACTTTTGTTTGCGTGACTGTTCGGATTGATTTGGA
CTTCTTCCGATAGTTAATATACGTCATTCGGATATtaatccaattttcaa
aaaacttgaatTTTGTAGAGGGTTTCGACCTAAGTAGAATTTCCCATGGC
TTTAAGAAAAAACGCAATAGTTTCTATTTCGATCGCTTTTGATATTTTAG
TTATCAGATTTTCCGGAGTGTATTTTTGATAGAAAGAAGAGAATATATCT
TATGGAAGTGGGTTTGAGCTTGTAAGATGCTTTTTTCGATTCGCGAATCT
AGATCTAACCTTGTAGCTTTTCAAACACGGATATATTCACAGACACAGCC
TCGTATCTGATGAGACAGGAATCGAAAGCAGTTTCTGTTGATAAATTGTT
CTACTTAACAGACATATTGATAGATTGATGGGTGTGTGAAGGTGCTACTA
CAGAAACTATAGACGACATTTGATAGAATTATTAATCATACTTGATCCTA
TCCCCTCTATATTACTTTCCTCACAAACTTCAAGGATTAggttttccttt
tcttttaagATGGAGTAAAAGAAAAGAGTTGATATTTTTCCCACAAAAAC
TCACTTTCTTTCTTTGCAAAATTGTAATGACATATCAATTATTGATTGGT
CCTCCTTTTTCAAAACTCtcagttcttcatttttcagTCAAAAGGAACCA
TTTTTATACTGTGTCATTTTTCATTCGATTGATGTTAAACAATCATGCTC
TTTTCGATTCTGACAATCTGCATCTTATATTGTATCGCTCAATCCTATCT
ATCAGAAGGACGTGATAATGTCCCCAAATTATCTCAACGTCGACATAAAC
GACAAATCAGAGATTGGAATTATACAAGATTATTGACACCGAACAAAGAA
GTGAGAGTCGGTCGTCTGACGTACATTTCAATACCGTTAGAAGTCTACGA
AGGAAAGACTTATTTTTCGGACGATTTAACATTTGAACTTCGGACAGAAG
ATGATCGTCCGCTGAAGCAAACTTCATGGATTGAATTTAACCAAGAATTA
GGTCGAATAGAAGCTTTCCCGATGAGAGGTAATGAAGGCCTATTCCGTTT
TCTCTTGATACCGTTGATGCATGGTCAAGCATATAATCACCGATATTTCA
TTAAAGTCAATGTGACCAAGGATGAAACTGAGTTCATGCATCGTGTTATT
TTCCACTTAGGACTTTCATCATTCAGGATGTTTCGTGAAAGGAAATTACG
AATACAATTCGTCCAGATCCTGATCACTTACTTCCGCTCTTTGGGAATGT
TGGTCAAACGAAACCATATCCAAATTATGGAGTCCGATTCTGTGTCCGGC
AATCTTGTCTGGCAACTAACCAGTGCTAAAACCTCGTCATGTGGTAAAAC
AATTACTCGCGATCTACCAAAATTTCTCCTTCATGACCAGGGTCAAAAAC
CAAGGCCGAATCTGGTTGCAGCATTTTCGGGGATTAATTTCCATATCGAT
AAAGTGAGAATCGATCTTACACCTCCTTGTTATATAGTCCAGCGACCGAC
AATTGAGGAAGAGAGTATCAATAGTTACTTAAAACCATTAATTATCGTAT
TAGTGACTATTTTACTGGTCAGTCCCATCGTTGttgccatttttctaaga
aagaaaATGCAACGAAACCGCACTAAATATCAAAATCCGACTCCAGTGAC
AACTAATCAAATGGTGGTCACAAATCACATGACTAATTACCAAGGACAGC
TTGagccgaaattttcattttcgtgTTGGATGTTTCGTAGAAAAGGGAAG
TCGTATAAATTCAACCAACGTATACGTCAACAAAACAAACTCATCCCTGA
CAATATTTTCGATGCGAAATATCTACAGCGCGAGCGCCTACAGTACGCTT
CGAATAACCAGTTAAAACAACCTGCAGTTATGTCTGGTCCAAATCGATCA
CGCGGATACCAAGAACAATTTACTATCGGCTATCAagagaactcgagaaa
atcccTCTCAATCGCGAGTTCCAATCCCTCATACTCAACTAGCCAAGATA
CCCCGCACTCTTCTTTCTCTCTTCGCACCTCACCCATCCACAATTTACAA
TCAATCAAAGATCCACGCTTTCGCCACCTGAATGCGAGCACAGATTCTAA
AAATAGTTCCCGTTGTCTGGAGACTGTGCAGAATTGCGTGAGCAAGAATT
ATGTGGTGCACCACGAGAGAAGGCCCTCTGTACACCTCATAAATATCAAA
CCTAAAACGGTCAACATCCATACAACCCACCCGAAACANTAGCTTTTCAA
ACACGGATATATTCACAGACACAGCCTCGTATCTGATGAGACAGGAATCG
AAAGGAGTTTCTGTTGATAAATTGTTTTACTTAACAGACATATTGATAGA
TTGATGGGTGTGTGAAGGTGCTACTACAGAAACTATAGACGACATTTGAT
AGAATTATTAATCATACTTGATCCTATCCCCTCTATATTTCTTTCCTCAC
AAACTCCAAGGATTAggttttccttttcttttaagATGGAGTAAAAGAAA
AGAGTTGATATTTTTCCCACAAAAACTCACTTTCTTTCTTTACAAAATTG
TAATGACATATCAATTATTGATTGGTCCTCCTTTTTCAAAACTCtcagtt
cttcatttttcagTCAAAAGGAACCATTTTTATACTGTGTCATTTTTCAT
TCGATTGATGTTAAACAATCATGCTCTTTTCGATTCTGACAATCTGCATC
TTATATTGTATCGCTCAATCCAATCTATCAGAAGGACGTGATAATGTCCC
CAAATTATCTCAACGTCGACATAAACGACAAATCAGAGATTGGAATTATA
CAAGAATATTGACACCGAACAAAGAAGTGAGAGTCGGTCGTCTGACGTAC
ATTTCAATACCGTTAGAAGTCTACGAAGGAAAGACTTATTTTTCGGACGA
TTTAACATTTGAACTTCGGACAGAAGATGATCGTCCGCTGAAGCAAACTT
CATGGATTGAATTTAACCAAGAATTAGGTCGAATAGAAGCTTTCCCGATG
AGAGGTAATGAAGGCCTATTCCGTTTTCTCTTGATACCGTTGATGCATGG
TCAAGCATATAATCACCGATATTTCATTAAAGTCAATGTGACCAAGGATG
AAACTGAGTTCATGCATCGTGTTATTTTCCACTTAGGACTTTCATCATTC
AGGATGTTTCGTGAAAGGAAATTACGAATACAATTCGTCCAGATCCTGAT
CACTTACTTCCGCTCTTTGGGAATGTTGGTCAAACGAAACCATATCCAAA
TTATGGAGTCCGATTCTGTGTCCGGCAATCTTGTCTGGCAACTAACCAGT
GCTAAAACCTCGTCATGTGGTAAAACAATTACTCGCGATCTACCAAAATT
TCTCCTTCATGACCAGGGTCAAAAACCAAGGCCGAATCTGGTTGCAGCAT
TTTCGGGGATTAATTTCCATATCGATAAAGTGAGAATCGATCTTACACCT
CCTTGTTATATAGTCCAGCGACCGACAATTGAGGAAGAGAGTATCAATAG
TTACTTAAAACCATTAATTATCGTATTAGTGACTATTTTACTGGTCAGTC
CCATCGTTGttgccatttttctaagaaagaaaATGCAACGAAACCGCACT
AAATATCAAAATCCGACTCCAGTGACAACTAATCAAATGGTGGTCACAAA
TCACATGACTAATTACCAAGGACAGCTTGagccgaaattttcattttcgt
gTTGGATGTTTCGTAGAAAAGGGAAGTCGTATAAATTCAACCAACGTATA
CGTCAACAAAACAAACTCATCCCTGACAATATTTTCGATGCGAAATATCT
ACAGCGCGAGCGCCTACAGTACGCTTCGAATAACCAGTTAAAACAACCTG
CAGTTATGTCTGGTCCAAATCGATCACGCGGATACCAAGAACAATTTACT
ATCGGCTATCAagagaactcgagaaaatcccTCTCAATCGCTAGTTCCAA
TCCCTCATACTCAACTAGCCAAGATACCCCGCACTCTTCTTTCTCTCTTC
GCACCTCACCCATCCACAATTTACAATCAATCAAAGATCCACGCTTTCGC
CACCTGAATGCGAGCACAGATTCTAAAAATAGTTCCCGTTGTCTGGAGAC
TGTGCAGAATTGCGTGAGCAAGAATTATGTGGTGCACCACGAGAGAAGGC
CCTCTGTACACCTCATAAATATCAAACCTAAAACAGTCAACATCCATACA
ACCCACCCAAAACATCACAGAAAGcaccaaaatgtgaaaacatCATCTTC
CCTACACATCGATAAATATGCTCGCTTCTCTCGAAGACACTCCGATGATT
CGGCGCGCCGTGTTCATCGCCATGACAACAATAAAACGCCTCTTCGGATG
GGCGGAAGTCGAAGCGCCACTTGTACGCCCACTAAACAAAGCAATGGTAA
ACTGGGCGGAAGTACAAGTGGGTTATTTTCACGAAGCATGGAACACGGCT
ACGGAACACCGTATGCAACACCCCCGCAAAGTTTCGATCGCTCGCTCATT
GATATCCGCCCTTTATCACGCCCTGATATTCAAGTTTACGTTCAAAACGC
CCCTCCATCTTCTGGGGCAGAAAGGAAATCATCTTTAGTAAAACGTCAAG
AGTGGATGGCATCAAGACATAAAAAAGCGTTCGAGATTTCATCTTATGAA
GAGATACAATCGCTGCGTCAAATCCCTCAATCGGATTATGATGAAGATAC
TGTATGATAAGAAACCTTTGAGAAACCTCCTTTTTATGGATTGAATGTAT
TGACTAGCGTCAGGACTGTGTTATCTTTATCATgtgattttttcatattt
tccatACAAACGAATAGAGACAATATGGATTCACgagtttaaaaataatt
ttgtgcCAACAAACAACCTCTTATTAACCCTGAAATATTCAACATAACGG
CAAACTCGTCTATTATTGGGTCCATGAATTCGGACTTATTCAGACTGTTT
TTAATTAGAATTTTCAACtatttaattatattttttttaaacgaaCTGAG
AATTCCTTTATCCATAAGTAGAATGTCATGGTCatatcttttactttttt
ttaattcgtgtcaaaaacgtctaaaaactATCAACTTGATAGAAACAAGC
GTGCATAAGTGTTACTATACACCAGCAACTCGATGTGTTGCGAGCACGAG
TTGGCAGAGTCAAGTAAGCACATTTATTCCCCTATCATAGGATAGTGAAT
CTCAGATTCAGGTTTTCTTTCGTCCACTATcgattttcttttcttgtaaA
ATTTGCATAGTTTAAACActtggaaaataatttgaaattaagGATTCATC
AAATTTAGGAAAGGCGGTCACCAcggaaaaagagagaaaatttcaatttt
NATTGGGTCCAGGAATTCGGACTTATTCAGACTGTTTTTAATTAGAATTT
TCAACtatttaattatattttttttaaacaaactgAGAATTCCTTTATCT
ATAAGTAGAATGTTATGGTCATATCTTTTACCTTTTTTTACTTCGtgtca
aaaacgtctaaaaattaTCAACTTGATAGAAACAAGCGTGCATAAGCGTT
ACTATGCACCAGCAACTTGATGTGTTGCGAGCACGAGTTGGCAGAGTCAA
GTGAGCGCATTGATTTCCCTATCCTAGGATTGTGAATGCAGTCCTAGATA
GGGCCTGTTCATCGGAAGGTTCATCTATTCTTGTAAAATTTGCATAGttg
gaaaataatttgaaattaagGATTCATCAAATTTAGGAAAGGCGGTCACC
AcggaaaatgagaaaatttcaattttgttttcagTATTGTGGTTGATGCt
aacgaaaaaaatatttggtcGAAAGCTCAGTAAGGCGTcaactctttttc
ttttcagttttctCTATTCTGCTTCCCATTGTGGTTTAGATTGTGTTCAT
GATTTTGACAAACCTAAACCCCGTTGTCTTTATCCCTTTGTCGCTTTTTT
TCAATCCAAAATATACCGTGATTATCTCAGTTTGGCTTTCTCTGAAATTC
AACCTGTGATGACATTACTATTCATAGAATCAAAGATGTCCTCATATTAA
ACAATAaacatttctattttttaatcattcctcCGGAAACTTTGACTGAC
TCTCAAATCTACTTTTCTACGTTTGCAACTTCTAACTGATTCGACTTTCA
TCAAGATCTGGGATGATTGCTATGGCTACCTGGTAACTTTTGTTCTAGTT
AAACACGCCCTGAATAGAATCCCGATTGTGAATTCAAGCGGCCTATCTTT
TTTCTACAGAAAACGTCACACTCCTTCCATCCTGCCATCCTGTTCTTAAT
ATGTTTTCAATTGAGAAAGTGAGAAAcctctcctgaaaatttttttttat
ctcggGATCCTACCTTGTTTCTTTGGTAGGGCCTACTGCCAATTTCTTCC
cgattgaaaagttgaaaaaaggtttTATGGTAATATTTTGTCTGAAAGAA
AAAGACTCTAATATTCGATCAGCAACTAGTGGGTACTCGAAAAGACGAAA
AGACATTGGCCCAAAATAAAACACAACAATTCAAGCAATATTCATTTAGA
CTCTCTAACACTTCTGCCCTACTGGGGTCCTTGTGTATCAGTGGACATTT
TTTGACTGATTCACTACTCCCTATTGTTGATTTGttgtttatataaaaaa
tacagCGGGATTCAAAAGATTTGAGAAATGTATAAACTTTTTGAGATACT
GGCTGATTTACTGATTATTTTAACAGAAGAGCAATAGTTGCTATGGCAAC
AAAACTGTTGCTATGGCAACAAGAAAATCTTTTCTGTATAATTTNTAATA
GTTGCTATGGCAACAAGAAAATCTTTTCTGTATAATTTCCGTCAATTATT
CTGAATGAGAGTAAAACTTCGCACATTGCCTAGATTCTTTTGGGATAAAG
TTGTTTTCAAAGGGTTTTTGGAATCAATTATCAGAAGAAAATTGCATAAC
TTTAGCCCCGGCCATCTAAAAGCGTCAGCGATTGTGTTGCGATGTTGTAT
CGTAGTTTTGTGGAttggtttttcaatttttgaagatGAATACCTCTACT
GAACATGAAGAACTAAAGACTGGGAGCGAGTCTGCTTTAGACCAACAACA
ACATGTTTCACCGGAAAACACCCCAATTGAAAAAGAGATATTACAACATG
AACAAGACAATAcgcatgaaaatgaaaaagacgaACACGGCAcaaatttg
tccgaaaatcagaTAGCGTCCGATAGTAAAGAGATAGAAATAATTGATAT
AGATGAATTTTTAATACGAACTAAAGAATGTGGTCTTTCACAATTCGCAA
TAGTGTTGGGAATGATGTTAGTGACGTTCACGTTAGCATATACACCCTTC
ATCTTCTATTTCATTGGTTTTGACCCACATTGGATCGACACGGAGAATGG
AACAGCTCATTATAGGGAAGATAATTCCAGATGTTTTCTTAATGAGTCTC
AATGGCGGTACGATCATGAGAAAACCACAGTTGTCACAGAGGTAAACAAA
TTGTTTAGTTTCATTTGATTGCCTTTACAATATCCATACATCATGATTAA
CTAAAATAGGGAGGACAAAAGACAGATCAGACAGAatctcatttttttga
aaaaagtagccacgagaagttttttcgcgttggtgcaatgcaacatgctc
tatcccaccaacacaagaaaaaaagtgcgtgtctcatggtttcttttttg
tttcatgggacaaaaagtgagggaaatacccaaaagacacgctgattttg
tcccttggacaaaagtgagagaagcaTTTAtgttatcaaaagaaaaatgg
ggttgagacacgagaaagcgtttcaggttggtgggatggagcatgttgca
ttgcaccaacgcgaaaaaaaattctggTATCCCATAGCCTTTACTGTCAA
GAATTATTGTGAAAAAATCCCTTGGTAGAAAATTAAAATCCTCCCTGGTG
ATACGTTTACTTTATCTAAGAACTCAAACAATAACACCTACCacttttct
tattcttttatagtatgGTTTGATTTGCGATAAATCCTGGATGTTATCAA
TGTTGGGATCCATTGTGTTTGTTGGATGGGCTTTGGGAAGCTTCGTCTTT
GGATTTTTTTCGGATAAATATGGTAGAAAATTAGTCATGATACCCTGTTT
ATTTTTTGATCTCTTCTGTTTATTTCTTCACGGATTCATTTCTTCAATAT
GGGTTCTAATGGCTGTTCGGTTCATTATGGGATTCTTTCACGCTGCTCCT
GCCATCAATTCTTATATATTGATCGTGGAACTCATTGGTCCAAATTATCG
AGTGCTTGCAGCGAACGTAGCTGGCGTTGTATGGGGTATCGCCACAGCTG
TATTAGCACTGAAAGCATTTCTTATAGATGATTGGCGTAACCTATGTATT
GCAGCTTCTGCTCCTTACTTTGTCTTGGTGGTATTGGGAATGTAAGTTAA
TCTTATCTAACTCTATGAATTacttttttagctatttttttttctttaaa
gatacCATAACGAGAAAATAACGAGTCTTATGGGAGTAGTTTTGATTGAA
GGGGAgctttgacaaaatatcaattttgtcTCCAAATAGCAGATGCTATT
TGACAATAACTCATAATATCTGTCGAGCTCATTCTTAGGATTCGGATGAT
TTCCACCTTGACATTCAAGTCTCATACTATAGAGATTCTTGGTTGGACAT
CTTCCTCTAAAGACGTTTCTAGAAACTTCCTTATTCAAAATAATGCAATG
TTTTCCAGGTTTCTCCCTGAATCAGTACGCTGGTTGAATGCCAACGGAAG
ATCAGAGGACGCAGAAAAGATTTTACACAAAGTGGCAAAATATAACAAAC
GAACAATTGAGAATGTTTGTTTGAAACAAGAAGTTGAAGATCAAAGTGGA
TATTCATATCTTGATCTTTTCAATACAAGAAAAGTTCTGAAAATCACATT
ATCACAGGCCTACATTTGGTACGTGTTTTGTCTTTTTACAATATCTTTTC
GCCATACATGTTTTATATAAGCAAGtaatatcaggctcgcattattcTTA
AAATTCTATTGAGAGCCATTATTTTGGTAGCAAAAACTGAGCacgcatat
gcttataaacgtttcATTCTTTAGGACTCGGGACACTTGGGCAATTTCAG
ggggaatttttttcattctaaagaagaattttttcaaaaactgttttGAG
AGTGGGTAATCAAATAATGTCCAAAAAATTTGTTATGGGCTAAAACAGAC
GTCACAAGCGAAAATCCTTGGGACCCGAAATTTGACGAAAATTCAAAAGT
CGCTAAATTCTAAAACCACTTATACCATTAGGATATTCTCGAAAAAACAA
TACCATAGAGGAATTTTAGGCGGATATGGTCGAATTTTCAACGTAACTCG
AGAGAAACGGCGTCAAAGTGACGTTTTCTAAATGTTTGGCGTTAACCTTA
TACTACCAAGTTATACTTCTTGAAATTACCCCTTCATTCGAATTGATTTG
TGCATGTCCAAATTATATACTTATACCAttggaaagctctcgaaaaacga
TATGGAGGACTTTTAAAGCGAATATATGGTCGATATCTCAACGTAACTCG
AGAAAATGAACGCCAACATTTAGAAAACGTAACTTTGACGCCGCTTCTCT
CGAGTTACTCCGGAAATTGTCGTCCCGGGTCCTAAAGAATTATATTTGTG
AAATGTTtcaatttgtactagtaatcgtatggtttggagtgcaattaacg
attaatcacgagtaacaaaggagaaaatagtaatttgcacgagtccgaag
gacgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNagtgattaatcgttaattgcacgacaaaccat
acgattccgaggtaatcgtcagtaaataatcattagtaaatcatagtttc
tttagaaaaagggaaaatttttgacattcgaaTTGCAATGCAACTTATGT
ACACAAAGcgaatttctttgttcttttttatattggagaaaaaaaatgtc
tttgttttttattatatagtaaaaaaaagtctctgacacaggacttggga
caaaaaagaataaggggacaaaagtgtccccccgccgaagagtgcaaaaa
gtggtaatagtgcaattaacgattaattgcactcctctaaaccaatcaga
ttcgagtaattttgcacggctgacgattactaTAATAACTTCTACATTTG
TTTCAGGGGGTGTCTTGGAATGGTATATTATACATTGTCATGGGCGTTTG
CAGATCTGGGAGGTGACATGTATCTGAATTTCATTTTGGCATCGATTGTG
GAATTACCGATGCACGCTGCTTGCGTTATTTGTCTACAAAGGTATACTTC
AATTTGCATTTTTGATGATTTGGCTCTAGATTAGATACTTATTTCTCGAC
CGTTTGGCTAGGGCTAGTCCTTCTTAAGCTTCGAAGATAACGTTAAAAAA
GGGTCACCCTTTAAAAGGTGATAAGCCTATTCCTAACagaatctttcttt
tttgtttttagtttcGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004053-exon-sc0000039-1491911889:580172..580432 | TCONS_00004053-exon-sc0000039-1491911889:580172..580432 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1510915933:580172..580432 | TCONS_00004053-exon-sc0000039-1510915933:580172..580432 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1575043694:580172..580432 | TCONS_00004053-exon-sc0000039-1575043694:580172..580432 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1491911889:592230..592439 | TCONS_00004053-exon-sc0000039-1491911889:592230..592439 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1510915933:592230..592439 | TCONS_00004053-exon-sc0000039-1510915933:592230..592439 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1575043694:592230..592439 | TCONS_00004053-exon-sc0000039-1575043694:592230..592439 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1491911889:593828..593962 | TCONS_00004053-exon-sc0000039-1491911889:593828..593962 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1510915933:593828..593962 | TCONS_00004053-exon-sc0000039-1510915933:593828..593962 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1575043694:593828..593962 | TCONS_00004053-exon-sc0000039-1575043694:593828..593962 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1491911889:594133..594140 | TCONS_00004053-exon-sc0000039-1491911889:594133..594140 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1510915933:594133..594140 | TCONS_00004053-exon-sc0000039-1510915933:594133..594140 | Clytia hemisphaerica | exon |
| TCONS_00004053-exon-sc0000039-1575043694:594133..594140 | TCONS_00004053-exon-sc0000039-1575043694:594133..594140 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:580172..594140 + |
Blast
BLAST of TCONS_00004053 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.831e-17 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2
Query: 236 GYLIMPTKRFLPESVRWLNANGRSEDAEKILHKVAKYNKRTIENVCLKQEVED---QSGYSYLDLFNTRKVLKITLSQAYIWGCLGMVYYTLSWAFADLGGDMYLNFILASIVELPMHAACV 592
G ++ F+PES RWL + GR +AE+ L+ +AK N++ L ++G S+LDLF R +L TL +IW +VYY L+ + DLGG +Y N L+ ++E+P + C+
Sbjct: 235 GTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFSLTHPANRSCRETG-SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCI 355
The following BLAST results are available for this feature:
|
