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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004052 ID=TCONS_00004052|Name=TCONS_00004052|organism=Clytia hemisphaerica|type=transcript|length=1118bp
ttacaaaactttaaaacatgAAATAACAAAGAAGAATGATGATTGTTGGT
GAATATGTTCATACGAATTTATCATCGCCTTCATCATCTTCACTGCTGCT
ACAACAAGTGTCACTGTATGAAAGAAAATTAGGCACAACATCTCGTGCCC
TCCTATCAAAGCTCACAACATCTCGCGCCCTCCTATCAAAGCTTACAACA
TCTTGTGTCCTGCTCTCGAAGCTTGTCAGACCATTGGATATTTGATCATG
CCAACCAAAAGgtttgtgattttttatttcgtttgTTTCTAAGGGTGGAG
GAGAGTATTCTCGGTCCCAAGCCCCTTGTTCATCCTCCTCGTAAAATTCT
CCTTCGTATTCTATATTATGATATAAATGTTCTtcgattttctgaaaatg
cttaTTCTCGTAAACAGATTCTTTTCGAACTCTTTTTAATTGTTGCTGAG
AAACGCTCCTCAATGGCGACAAAAACACGTCATCGTCGTCCAGGTTACCA
AGGTGATTATTTTCCATGATGGGAGAGAAGTAGTGATCATCATATTGCTG
ATGATAAACATCCTCATGTTGTCGAATGTTTCCGTTCGAATCGAACATTT
CTGAAGAATTTGCTGAAaacacaaaacttttcaaagaatcgatGACGCTG
GTTTTTCTCTGCTTCTCTGGAGAGTTTGGATACTGGTTACTGTTTGATAG
ACTCCAATTAAACACTTTTGACATATGAGTGTTATCCCATCGCTCTGGTA
AGCTCATCTTCTTACGAGACCTGTCTTGAACCACTTTGTGATTTTGTAGA
TCACCATCATCTTTCTCCTGATCTTGCAGTTGATCGAATATTTTCCTGTA
TTGACTGTTCTCCTCAGCGTTTCCTTGTCTTTTCAATTCGTTGAGAGATA
TAAGGCGATGTTGGCGAAAGAGTGTTGGTTGTTGACAGGTCGTTGTTGTA
TGGCGTCGTGTATTTTGTTGAGAGGTCCTCCcttcaacaatattttcatc
TTTCGTAACATTTTGTTGAACTGGTATTGATTGTTGTTTCTTTTGGTGAA
CTTCTTTTAATCGCTCTTTATCTCGTTCTGAACGAATATCCAACAAATTA
TGTAAAGGATTCAACGTG Run BLAST on NCBI transcript from alignment at sc0000039:580172..581289+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004052 ID=TCONS_00004052|Name=TCONS_00004052|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at sc0000039:580172..581289+ (Clytia hemisphaerica)
ttacaaaactttaaaacatgAAATAACAAAGAAGAATGATGATTGTTGGT
GAATATGTTCATACGAATTTATCATCGCCTTCATCATCTTCACTGCTGCT
ACAACAAGTGTCACTGTATGAAAGAAAATTAGGCACAACATCTCGTGCCC
TCCTATCAAAGCTCACAACATCTCGCGCCCTCCTATCAAAGCTTACAACA
TCTTGTGTCCTGCTCTCGAAGCTTGTCAGACCATTGGATATTTGATCATG
CCAACCAAAAGgtttgtgattttttatttcgtttgTTTCTAAGGGTGGAG
GAGAGTATTCTCGGTCCCAAGCCCCTTGTTCATCCTCCTCGTAAAATTCT
CCTTCGTATTCTATATTATGATATAAATGTTCTtcgattttctgaaaatg
cttaTTCTCGTAAACAGATTCTTTTCGAACTCTTTTTAATTGTTGCTGAG
AAACGCTCCTCAATGGCGACAAAAACACGTCATCGTCGTCCAGGTTACCA
AGGTGATTATTTTCCATGATGGGAGAGAAGTAGTGATCATCATATTGCTG
ATGATAAACATCCTCATGTTGTCGAATGTTTCCGTTCGAATCGAACATTT
CTGAAGAATTTGCTGAAaacacaaaacttttcaaagaatcgatGACGCTG
GTTTTTCTCTGCTTCTCTGGAGAGTTTGGATACTGGTTACTGTTTGATAG
ACTCCAATTAAACACTTTTGACATATGAGTGTTATCCCATCGCTCTGGTA
AGCTCATCTTCTTACGAGACCTGTCTTGAACCACTTTGTGATTTTGTAGA
TCACCATCATCTTTCTCCTGATCTTGCAGTTGATCGAATATTTTCCTGTA
TTGACTGTTCTCCTCAGCGTTTCCTTGTCTTTTCAATTCGTTGAGAGATA
TAAGGCGATGTTGGCGAAAGAGTGTTGGTTGTTGACAGGTCGTTGTTGTA
TGGCGTCGTGTATTTTGTTGAGAGGTCCTCCcttcaacaatattttcatc
TTTCGTAACATTTTGTTGAACTGGTATTGATTGTTGTTTCTTTTGGTGAA
CTTCTTTTAATCGCTCTTTATCTCGTTCTGAACGAATATCCAACAAATTA
TGTAAAGGATTCAACGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004052-exon-sc0000039-1491911889:580172..581289 | TCONS_00004052-exon-sc0000039-1491911889:580172..581289 | Clytia hemisphaerica | exon |
| TCONS_00004052-exon-sc0000039-1510915933:580172..581289 | TCONS_00004052-exon-sc0000039-1510915933:580172..581289 | Clytia hemisphaerica | exon |
| TCONS_00004052-exon-sc0000039-1575043694:580172..581289 | TCONS_00004052-exon-sc0000039-1575043694:580172..581289 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:580172..581289 + |
Blast
The following BLAST results are available for this feature:
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