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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003975 ID=TCONS_00003975|Name=TCONS_00003975|organism=Clytia hemisphaerica|type=transcript|length=1335bp
ccattttccaaAGATATCGCGTGTTTTAGGGTcatgcaaagccttaaaat
gttcttcgcttattcttaacattttggccattaaagtcttatgttcttat
atagttcattcttataaaaaacctgtGTTTACCTGAGTTACGATTGTATG
CAATGAGAATACAGCGGACGCTcctccccagctggcacacaacgttgttt
caacgtttttctaacattcacaacgtccatataacgttagataaacgttg
aaacaacgttctgtgccagctgggttaattcaaacttctattattcgaat
ctttctatttAATCCGAACTCTTCTTCACTTCCCGCCGCCAAAGAAAAAC
CCTCatgaaatactttctatatttcgaatttttctgtatttcgaacaaat
tagactcccaattcgagttcgaattagcgagagttgaCTGTAAGCCCAAA
CTCGTTCAACAGCTTACCTATATACTATGAGATTATTTCATCAAAACGCT
CactaaatatttcattttttatcaattttgggTGGCCCTTTACATGGAAC
AGTAATTATTTGATAGGTACATATTTGTGTTTAATTAGAATTTAAAGTAT
GATCGATGAGAATTCACCCCAAATGTTTACTTTTTCGTGTCACACAACTA
GTACTGCACAACGGACCttcacacgtttttttataagaacaaactatgta
ggaacataaggcttcgatgaccaaaatattaagaacatgttaagaacatt
ttaaggtttcgttaaatctaaaacacccaatttcttaagaaaatggacag
aaatactaaaaatggcggaaataaGAACATACCAAGAACATATATTTAGA
ATAATAATatatttaaaactcaaaaagttaagaacaactGAAGGCtccaa
aatttttagatgttctaatACAAAAGTGAATGTCGTAAGTAGGTGAAACA
GGGTTGATGTTTGAAAAATACGCTTTTTTAACTCCGACCCTGAATTTTTA
CGTATTCACGCAACTTTATAcgtgaaacctttttaaacaagTGTATTAGG
ACAAAGTAAGAGgaacattttcagaaaaagtagCAAAGGCCCTGATAATA
ATTTCGAAAAGAACGTTTCGCTCTAGATTCATACCAGCCTGGATATCTAA
ACagcaatatttttgattttgattttactgtTGTTTGCCTGTTTACAGAT
ATAGATGGTATGTTTGTGGTCGCAAAATTCTTTTAGATGCATGCAATAAT
TTACAGTACGCATTCGCTGCCTTCAGATTTCAGAATACAAACAGCTTGTC
ATTGTTGTGGTAAATCAGAAacattagaaaataaa Run BLAST on NCBI transcript from alignment at sc0000038:111595..112929 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003975 ID=TCONS_00003975|Name=TCONS_00003975|organism=Clytia hemisphaerica|type=transcript|length=1335bp|location=Sequence derived from alignment at sc0000038:111595..112929 (Clytia hemisphaerica)
tttattttctaatgtTTCTGATTTACCACAACAATGACAAGCTGTTTGTA
TTCTGAAATCTGAAGGCAGCGAATGCGTACTGTAAATTATTGCATGCATC
TAAAAGAATTTTGCGACCACAAACATACCATCTATATCTGTAAACAGGCA
AACAacagtaaaatcaaaatcaaaaatattgctGTTTAGATATCCAGGCT
GGTATGAATCTAGAGCGAAACGTTCTTTTCGAAATTATTATCAGGGCCTT
TGctactttttctgaaaatgttcCTCTTACTTTGTCCTAATACActtgtt
taaaaaggtttcacgTATAAAGTTGCGTGAATACGTAAAAATTCAGGGTC
GGAGTTAAAAAAGCGTATTTTTCAAACATCAACCCTGTTTCACCTACTTA
CGACATTCACTTTTGTattagaacatctaaaaattttggaGCCTTCagtt
gttcttaactttttgagttttaaatatATTATTATTCTAAATATATGTTC
TTGGTATGTTCttatttccgccatttttagtatttctgtccattttctta
agaaattgggtgttttagatttaacgaaaccttaaaatgttcttaacatg
ttcttaatattttggtcatcgaagccttatgttcctacatagtttgttct
tataaaaaaacgtgtgaaGGTCCGTTGTGCAGTACTAGTTGTGTGACACG
AAAAAGTAAACATTTGGGGTGAATTCTCATCGATCATACTTTAAATTCTA
ATTAAACACAAATATGTACCTATCAAATAATTACTGTTCCATGTAAAGGG
CCAcccaaaattgataaaaaatgaaatatttagtGAGCGTTTTGATGAAA
TAATCTCATAGTATATAGGTAAGCTGTTGAACGAGTTTGGGCTTACAGtc
aactctcgctaattcgaactcgaattgggagtctaatttgttcgaaatac
agaaaaattcgaaatatagaaagtatttcatGAGGGTTTTTCTTTGGCGG
CGGGAAGTGAAGAAGAGTTCGGATTaaatagaaagattcgaataatagaa
gtttgaattaacccagctggcacagaacgttgtttcaacgtttatctaac
gttatatggacgttgtgaatgttagaaaaacgttgaaacaacgttgtgtg
ccagctggggaggAGCGTCCGCTGTATTCTCATTGCATACAATCGTAACT
CAGGTAAACacaggttttttataagaatgaactatataagaacataagac
tttaatggccaaaatgttaagaataagcgaagaacattttaaggctttgc
atgACCCTAAAACACGCGATATCTttggaaaatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003975-exon-sc0000038-1491911889:111595..112929 | TCONS_00003975-exon-sc0000038-1491911889:111595..112929 | Clytia hemisphaerica | exon |
| TCONS_00003975-exon-sc0000038-1510915933:111595..112929 | TCONS_00003975-exon-sc0000038-1510915933:111595..112929 | Clytia hemisphaerica | exon |
| TCONS_00003975-exon-sc0000038-1575043694:111595..112929 | TCONS_00003975-exon-sc0000038-1575043694:111595..112929 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:111595..112929 . |
Blast
The following BLAST results are available for this feature:
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