TCONS_00003961 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00003961
Unique Name	TCONS_00003961
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	466

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000038:782502..802524-

transcript sequence

>TCONS_00003961 ID=TCONS_00003961|Name=TCONS_00003961|organism=Clytia hemisphaerica|type=transcript|length=466bp
GTGCTGATTACTTGAATTTTCTGCTGCAAGTTTTGTATATCCTTAGCATT
GTCATTGGTATCTTTCATTAAATTTCCAAGCATCGTATGAATCAAGGAAT
TATGTTTATCCAAAGAACACTTTTCCAAATCATAAAACTTCTGCATATCC
TTGTACTGAAGTCCAAATAGAATGTTCTCAATTCGactcaaaaatgtttt
gaacGTTGGCAAGTCTGGAATGTCGGTAACAGCTCCATGCTTTAATTCGT
TTCGAAGTTTTCTGACCAAATAAAGATAAGCTCCAATAGATTGGTCACCT
GGACTAACATTCTTGATATCCCAGCCTCCATTAGGTTTAAGACCAACAAC
AGTTCGTAGGACAGCAATGAGTAAGGTAATGTCCCAATCTTCAGGGTTTG
AAAGTTGGTTTTGAGGACAAAGTGTGTTCCATTGATCAGATTTTAGCACT
TTGTGAAGCCTATTTC

Run BLAST on NCBI

transcript from alignment at sc0000038:782502..802524-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00003961 ID=TCONS_00003961|Name=TCONS_00003961|organism=Clytia hemisphaerica|type=transcript|length=20023bp|location=Sequence derived from alignment at sc0000038:782502..802524- (Clytia hemisphaerica)
GTGCTGATTACTTGAATTTTCTGCTGCAAGTTTTGTATATCCTTAGCATT
GTCATTGGTATCTTTCATTAAATTTCCAAGCATCGTATGAATCAAGGAAT
TATGTTTATCCAAAGAACACTTTTCCAAATCATAAAACTTCTGCATATCC
TTGTACTGAAGTCCAAATAGAATGTTCTCAATTCGACTCAAAAATGTTTT
GAACGTTGGCAAGTCTGGAATGTCGGTAACAGCTCCATGCTTTAATTCGT
TTCGAAGTTTTCTGACCAAATAAAGATAAGCTCCAATAGATTGGTCACCT
GGACTAACATTCTTGATATCCCAGCCTCCATTAGGTTTAAAACCAACAAC
AGTTCTTAAGACAGCAATGAGTAAGGTGATGTCCCAATCTTCAGGGTTTG
AAAGTTGGTTTTGAGGACAAAGTGTGTTCCATTGATCAGATTTTAGCACT
TTGTGAAGCTTATTACCTGAAACATAAGAAAACTGAGGTTGAGTATGTAT
CTGAATTGAGAGGAAACAATGTCATTCATGGCTAAAAAGTGAGCAATACT
ATTATTGTAATCAATAACACAGATGCACTTCCTATCTTGGAGTCACCCTT
GAATAAAAAAGTAGGTATTTTCATCTGGTGGCTGTTGGTAGAGCAGGGAG
TGAGGGAGTCTCTCCCCTTTTCTATCTGCGGTAGACCTGTGAAGTCCCAC
ACCTTCTCTCAGCCCCAAGCTATCTACCTCATTGATCAGATTACCCAATC
TAAGCAACTCATTTGCTGAGTTGGCAGTGACCGGGGATGAATCTCACATC
CCTTAGATTGTACAGCGAATACTCTACCAAGCCATGTTTAATATTAATCT
AAACCTATATTCCATTATTACGTTAAGGTTTCCTGATACAACTCAAGTTC
ACTTACGTTTATCTTGTTTGCATTGCAATAATCGCTGATACAAAGCTGAT
GGATTTGTTGGCAGACCATGGTAAGATGCATCATTATGAGAATTGTAAAG
AACATCTATAAGTGCCTCTTTAATGCAATATTCCAAAGCGAGATTGACTC
GAATCCAATACTCGCTTTGTAGAATGTACAGAGGTGTACTCATGATGTTC
TAAAAGAAACACTTTGCTGATGAGGTCTATAAGGGAAAATCGAAACCANG
CAGAGGTGTACTCATGATGTTCTACAAGAAACACTTCGCTGATGAGGTCT
ATAAGGGAAAATCGAAACCAGATATTGCTTCTGAAGAAAAAAATTTTAAG
AAAAGCTGGACTAACAGAGGGTTTCTTTTAAAACTTTATGGTCCTTAGGT
TGCACGCCTGACGGAAGCGGGAGACTGGGGAGACTTCAGCCTCCCAACTT
TTGAGCAAATGAGATTTTTTTATTACATTCCTATTGATTTTTATCTCATT
TTCAGCCTTCAGCCTCCCCACTTTTACGTTTGTTCCGCAGGGACTGCCTT
GGAGTTTAATACTGGCAGAAGATATGATTTCCTTACGCTTACAATGTTGG
TTTTTCTCCTTTTGTAGCAAAGTGGCATGATGCATGATGGAATAATTCAA
TCATCTCTCATATTTTTGTCCATAAAACATCATTGTTCTATTTTGTTCAA
TTTTTGTATTTGTTCTTTTATTTTTGCTAAAAAATAGAATAATTGTATTA
GAATTGTCAGGACAAGTTTATATTGAAGTATATTGATTTGACTTTTATTT
CAAGAAAACAAACTTTTTCAAATTGAGTCCTTTTTCCTTGAAAAATACAC
AATACAGATTCCAATATTGGTTAACAAAATACCAGATACTTTTTCTTCTT
TTTTTTCTTTGGGGGGGGGGGGGGGAAAAAACAAAAAAAAAATTCAATTT
TTTTAATTTTTTTTAGAAAAAACAAAAAAAAAATTCAATTTTTTTAATTT
TTTTTAGAAAAAACAAAAAAAAAATTCAATTTTTTTAATTTTTTTTAGAA
AAAACAAAAAAAAAATTCAATTTTTTTAATTTTTTTTTGCTTGTGGTGGG
TGTTGTTTGAAAAAATCTAACAAAAATTTCAATTTTTATACTTTTCTTGA
GAAATACACAAAATAGATTCAATTTGAACATATTTTCTTAGGGAATATAG
AATCAAGACTTTAGAAAATTAGAATAAACATATTTTTATTGAGGAATGCA
AAGATCATATTCACTTTCAGCCCCGGGGGTGGAGAAAATTATAAAAAGGT
CTCGCTAAGGGTAGAAAGTTTTTTGAAAATCGAACAAAATGTTTCAAAAT
TTGTTCTCTCCAAGGGTCAGTTATGGCAGTTCCTGTCCCCACATAACCAA
CATTCTCCAACCCTAGTATCCTAGTTGGTTTTAAGCACAGTTTTTCCTTT
AGAAGTACGTTATAATAATCCGGCACCCTTCAATTCACTTGGAAATTTCT
ATCTTTGGAAAGTAGCCTAATAACAATAATGTGAAAACATTACCCTCCAG
AGACACAAAATTTTTTACTCTGAATACATTTTTTTAATGAATTCACAATT
CTGATACACATCAACTTGTTTCATTTAATTTCCTTAATAAATACAACATA
AATTTCAATGTCCATAAATTTTCCTTGTGAAATACACAATAAAGATGTTC
AATATGGACACATTTTTCTAGGCAAAAAGATTTCATCGCAAACACTTTTT
CCTTGAGAAAAACTTAATTTAAAATTGAAAACATTTTCCTTAAGAAATAC
ATTATAAACAGATTTCAAGTTGAGCACATTGTCTTTGATAATTACTTTAT
ATATAAAGACTTCATTATGAAAGCAATTCTTTGTGAAATATATACATCAC
ATAAGTATTCAATATGAAAACGTATTTACTACGAAAATATTTTCCTTGAT
ACATACACAACGCAGACTTCAATTTGAATATTTTTTCCCTAAATAAGTAC
ATGAAACACTCATGTACTTTGAAAACGTTTTGCTTGATAGATAAAAAGTG
AACAATTCAACGAGATAAAAATAAAATAGATTTTAAATTGACTACCTTTT
CCTTGAAAATAAAAAATACTGACTTTATTCAATACTGATAAAAAACAACA
AATTTAAACAACAAATATTTCATTTTTTATACTTTTTTCTTGAGAAATAC
ACATTTTTAGTAAGATAATATTTTAATCTCAAGAGAAAAAATTCTAAAAC
AAGTCTCTCTAAAGTAAGGAATTTTTTTCAAAAATTGAGGTAAATGTTTC
AAAAATGCCTCTCTAAGGGTCACTTTTACACTAAAACTCAGTCTCTATAA
GAGTCATTTTTGGGAGGTTCTTTCTACATTCATCAAACCATGAAAATTTA
TAATGCAATACCTGTATTTTTGTCTTGATCAATTTGTCAAATCAGACCAT
GACAAACAAAAATTCCTTACATTGATGATCTACAGTCATTCCATTAATCC
AATAAAACAAGAAGTATGTACAGTGAGTTGGTATCAAACAATCATAACAT
AATTTTTTTATTCATTATCTCTTAAATTATTTTTTCTGTAAAAAGAAGAA
AACAAAATAATAATCAGGCAGAAGATATTATCAGAATCCAACCATGACAG
AATCAAAATATTTCTTACAAAGAATTGTTTATTAGGAAATGACTCTACTT
CCAATAGACCTTTTCAGAAATTAAATCACGAACATCACTTGCCTCATTTT
GTCAAGTGATTAACTCCCAGTGGATTTTATTAAAACTACTTCCTACTCAT
AAAAGAATCATTTAATGCCTCAAAAGACATAATCACCATGGTAATTGATT
AAATACGGGCAAGTGATGTTCGTGACGTAATTTATGAAAAGGTCTATTAC
CCTTATAATTCAAAATTTTCTTCATTCTGAAATTTTGCTGGGTTTTTTGA
AATGTCTACTCTATTAAGAACACTAAAACGAATGAATATCAACTGAGAGT
AAAAAGAAAATGTTTTCTTGATTAATATACATTAGAACGTAACAGGCAAT
CGTAGTATAAAAATCAAATAAGAATATTTGTTTTTGGGAAACTCTGGAGA
AATGAATCTAGCTCCATTATTTTATTTTATTTTTCAAAATTTTCCATGTT
TTCACTAAGAGATTTTGTTAAGTTTCAAAAAAGAACCATGAAACTTATTT
AGAATTTCCTTCCTTGGGAGTTGGTATGGGTAGAATCGTTCAAATCGTGA
ATAGGCCGGTGAAATAACTGAGATAAAGGAGGGACAAAAAGTACACTTCT
TATAAAATAACTATCAAAAAATATTTATTATAAAGTTCCTATAAATTCAA
ATTTAAACAAATATTAAAAATATGCAATCACGTGGGCAATAATAAAAAAT
TATACGTACCAGCCTTATTGATAATAACAAAAAAAAGGTGCGTGAATTCA
TCAACCTACATTATGAAGTCGACTTAGTTGCATTTGTGTTCTGCATCTTT
CAGTTTAGTGTCCAAAAAAAGCAAACTCATTCTACTAGAACCATCTTTCA
TATATAAACTCACTTTCCCATACGTCAATCGTTTCACAAATTTAATTTTT
TACTATGAGATAAGCATTGTTGAGTTACAGTTGCATAAAGAGACAAACAA
AAAAATATTCATAATTTCACTACTTTCACAACAAAAGGTTCAAAAATTAT
ACTACAAGTAACAAAGAAAAGTTCGCTGACAGCTCTCTGTCAGGTGTTAA
AAACACATACAGTAATTATATCTCTCTCAGATACCAGATTTAATCTGTAT
TAAAGCAGAGGAATGTAAAGAGATGGAAAAACAGCTTTTCTGATTACTCA
AAGTTCAAAGTTCAACGATCAATTCTATTGAAAATTCTATTGTAAAAACG
TTGATTAGGTCATTAAATGAAAGTCCAGAAAAGACGGCTCGCAATACAAA
TCGGACGGTTTCTACATGATTTGACGATAAAAATGAAAATTTGTTTTTCT
TTTTTTGCCGATTACTAGTTCAATTTTTAAGAATAAGGAGCAATATTTTT
ACCAATGTATAGCAAAAGAAATTCTTAACGCAATGATACTANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAATTTTCTCGAGCTCTAGCTTTCCATATTATG
GTGCGGTCATGATGCGGTTATATCAGTAGAATCGCTAGGAAATTCTGAGC
AAGAAGATATAGGCACCTTTTCGTATAGGAGAGGTGTACCCAAAAAGTTT
GCGCATAATTAGGCTTGAAACAAAAGAATTTTGTCACAACACGCTAATTA
TGCAGGTTTTTTATAGCGACAACAAAAGAAACCTATTTACTCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTATGGTAAAAAGGGAAGGGAAACAGTAAAGAAAA
ATTAAGTCTGGCAAATGTAATACCACTTTTTAGTGAAAATAAATAACTTC
CTTTCACGCAGACCAAATTTCATAACAGTGCTGGAAAATAATCTACAATA
TATGTAAACCCCCCCCTTCTTAAACGATCCCCCCTCCTTGATATCCCCCC
CCTTTTTAGTGAAAATTTCTGATCCTCCCCTTCTTCACTTTTTTGGAAGG
TGTCATCCCCCCTTAAGAAAGGGGGGGGGTCCGAACTATGTGAGAAATCT
AAATCATTGCAGGTCGAGATAAAAGATCAAATTTTAAAGATTTAAAAGGC
CATTAATATAAGTAATCTCTCTAACAAAATACCTATAAAGAATAACTTTC
TAAATCCGTTTTGAATATTGCATTGATATTTGATTTCATATCCAAGCATC
GTTCCAAAAGTTCCGGTGAACGTGTTTCATTGAATTTCTTGTGGAGTTCT
GCATACCATTTTATCAACCATGATAAATTTTTGATATTATCAGCATCAAA
ATCTTGTAACAGGTTTAATGATTCACTGAAATCATGTTTTTGGAATTTGA
CGAAAGAGAAAATAGTTGATAATAGTGAATCCAAATACAATGATTCGTCG
TGAAGTTTGTCAACAGCATCAAAGTTTCCAAGAGCTAAATTTATCAATGC
TTTAGTAGAAATTAAACTGCGGTCTGCACTTTCGTCAACATGATATTTGA
TCCCATTNTCAATGCTTTAGTAGAAATTAACCTGCGGTCTGCACTTTCGT
CAACAATATATTTGATCCCATTTGATATTTGATCACAAACCATTAGAGCA
TCAGTGTATTTACCTTTCTTATACAAAAAGAAAGCTTTATAATTTAGAAA
ATTGAAATGGTCAATAGGTGCTATGCAATCGTACATCTTATCAATGTAAT
CTTCAAATTCTTTAAAAACATTCTCTGCTTCATCAAATCTCTTTTGAAAC
AATAAATTGTTACTTTTTACTTTAAAATATTTGATAACATCAGTGGGATT
GTCAAAGTCTTTAACGTTTAGTGTCTTTAAAAGCTCTTCCGTAGGTACAT
GATCGTCAGCAATTTTGGCCATTTTTAATATAATTCGGGGAGAGTAAACT
TTCTTTTTCAATACTTTTTCAATAAATGTAGACCTTATTTTCGAGGCTAC
TTCAACCATTCTACATCTTTGGTACAGCTCAGCCTGAGTCAATTTCCAAT
CGTATAGTTGTTCATGATCGACCTCCAGTTCTTTGTTATATTCATTTTCA
AATTGTATTACTGTTGGGATAACTTGATCTTTAATGATATCATCTGAAAA
AGTATCTACGCAACAATGTATGTAAATTGTATAAGAATTCACCATTTCAA
TAAATTGTCCAAATTCTTTCGACTCTTTGTACTTTTTAGTGAGGAGGTCA
ACCGAAGAACTTGATATCAAACGTAGGCCACGGTCATCCATTCTTCTATC
TGAAATCAATGACAATTCAGATAACCCAATTTTATTTAAGAAATCAGTTT
GATGGTTGTCGATAAAGTGATTTTGCATTAAATAAACAACATGGGCATAC
CATAAATCTTCATCATCATAATACATTGCAAGGTTTTTTAAATCTTCCTT
TTTAAAGCTATAAATCTTTTCAATTGTATCCATCACAAGTTTTTTGGGAC
ATTCATCTTCAACTAAATTCTGTTCTTCAACACAATATCTTACCATTTTT
TGAACAAGGGCATGAATTTCCAAAAATCCATTTCTTTCATTAACCAGAGA
ATATTGACCGAGTAAATAAACAATTTCATCTACATCAATTTCATCAATAT
TATCCAAATAAGTGAAAGTTTTTTTATTGATTCTCTTATTATCCATGTAA
CCCATCATACTTAAAACTAAAATAGCATTTTTCGATTCCTCATTTATCTT
GTGAAATGCCATATCCCAAACTGTCAACAATGTTTTATCATAGTCTGAAA
ATGACTTTATTTTCATGCTTAAAACACTTTTGCGGCAAGCTTCAAATTGC
TCAATATAAGATGGGACAGTAATTTTCAACTTACGTATATAACATATTGC
TTGATGTAAAGCTAAAGGGTAACATTGTAGATGGCCAACTAGAGTTGAAA
TATCTTCGGCAGAAGCATCAAGGATTTGACCTTCCAAAAATCCAACAGAT
TCATATTCCTCAAAGCAAGGAACTCTTATATTGGTGACTGCAAGATCCTC
CCAATCAGTCAATTGTGATGTCATAAGTAATGATAATTTGTGCTTGTCAT
GACGAAGTAAACTTTTAAAATCTTTAGATGATAAGTTTGTAACATCATCT
AATATAATCAAAGTCTTTTCCTCAACTTTGCAAACTTTTGATAACAATAA
CTTGACCAACATTTCAGTCGAAGGATCTTTTGGAAGATATTGACCAAATC
CAAAATAGCGGATGATTTCGTCCATTGTTTTATTGAGATTGTCAGCAGCT
ATCCAAAAGACTTTTTGGTACTCATCTTTGTATAACTGTGTGAATTTGGC
AACAGTCTGTGTTTTTCCAACACCTCCCAACCCAGTCAAAACGACTCTTT
GATTTGAATCAAGTGCTGAGTGAATATTTTTGATAAGTTCCTTACGACCA
TAGAAAACGGAGACAGGATCGTATATGTTCCAATGTTCCACTATGGAAAA
TAAAAGTAATTGGTTTGATACCGATGTCGTTGAATTGCATAAAAAAAATA
AAAATCATCTGTAGTGAATTCACATCATAATGTGTTTAGATAAAGTGGAA
AATAGCAAAATTGAAAAAAATAAGCAACTCAATTATGCCGGCAAAACTCT
TCATAGAGAATTTGATATAGTATAAATTAAAACCTGTATGATCCCTGGAT
TGAATTGACTCATCTTTGATTTCCAAATTCTTCATTCTATCTTCCAAAGC
TGAAAAAGGATTTTGAAAGTATGGCGTGTTATTGGAAATCATTATAATCT
CTATTGTTTTTGGATCAATATTTTGTTTATCAATTGAAAATGAGACGAAA
AGGAATTTCTTTTTGTTAAGTTTAACCAATTGATTGATTCATAATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGCAGCTATCCAAAAGACTTTTTGGTAC
TCATCTTTGTATAACTGTGTGAATTTGGCAACAGTCTGTGTTTTTCCAAC
ACCTCCCAACCCAGTCAAAACGACTCTTTGATTTGAATCAAGTTCTGAGT
GAATATTTTTGATAAGTTCCTTACGACCATAGAAAACGGAGACAGGATCG
TATATGTTCCAATGTTCCACTATGGAAAATAAAAGTAATTGGTTTGATAC
CGATGTCGTTGAATTGCATAAAAACAAGTGATACTTTTATGGACCTACCT
GGTTATGAATATAACACATATAATTGATATATACGTGAGCATGACCGTCA
AAAAATCATTCAGAACACAAATAGTGACAACCTATTAAAATTAGTTGTTT
GTGTTTCTTATAAAAAAACGTTTAGAAACCAAAATTTCATGATCGTGAAA
TATTCTTTCATACTCAAGACTTCGTGAGCAAAAAAACATCTTTCTCATTA
AAGAATTGAGTAATTTGACTAAGAACATTGATGTATGCTTATTAATAGGG
ATTCTTATAGATAAACATGCGTTTTTTTAGCCAACAAAATCCTTTTGCCA
AAATCTGCTTGAGCCATCTTTTACCTATTTTCATGCAAAAAATCTGAAAA
AATTAATGATCCAATTTTTCACAAAGTCTAAAAAAAACCCGTTTTTTTAG
CCGTTTTTTGGCCCAAATTTGCCCCAAAATTGTTTTTTTCGAAAATCGGG
CTCAGTCACATTTTGGCCACTACCATTTTGCACCTTTGTACCAAAAATCA
AAAGATTCCTATGATTCAATCCTGAGAAAAGTTGGTAACAGACGAACAAA
CGGACGGACGGACTAACACAGGTTAATTTATAGGACCTCCACCCCACAGG
GGTAGGTCCAAAAATTTAAAATCATCTGTAATGAATTCACATCTTAATGT
GTTTATATAAAGTGGAAAATGGCAAAATTGAAAAAAATAAGCAACTCAAA
TATGCTGGCAAAAACCTTCATAGAGAATTCAAGATAGTATAATAGTAAGT
CAAAACCTGTATCATCCCTGGACTGAATTGACTCATCTTTGATTTCCAAG
TTCTTCATTCTATCTTCCAAAGCTGAAAAAGGATTTTGAAAGTATGGCTT
GTTATTGGACAGTATTATAATATCTATTGTTTTTGGATCAATATTTGGTT
TATCAATTTAAAATGAGACGAAAAGGAATTTCTTTTTGTTAAGTTTTACC
AATTGATTGATTCATAATAGTTTGATTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGG
AGGGTCGTTTATTTGGAACCTAAGAGTAATGAAGAATTCTTTTTATGTAA
AAAAATTCTAGTTCAATGTATGTAAAACACATATAATATCAGCTCAGATT
GACTTAAATCAACTTTTTGGTCAGCCTAAGCTGAGCATTCAAATAGGTAA
AATTTTCTTCCACCATAAGACGGCAAAAAAAAAATTCCGATTTTCCGATC
TCACTTTGATTTCTAAACTTTCTTCCGATCGGGTTAACTTTTTGGGTACT
TTTAGCGTGCGTTGTTTTTACAGATCATAATGTAGTTTCAAGATGGCGGA
TCAAGCGATGTCGATAGTCAGATGTGATAAGTCAGTGTTGTACCAAAGTA
TTTCCAGTGTAAATCTGTTGCAAGCTTCAATTTCTGTCATTTATTTTTTT
AACTAGGCAAATCAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACACA
TGATTTTCATCAAGGGGATTCTTTTTCTACATCCTTTGAAGGTTTAAAGC
CGTTTGCTCAAGTTTTTGTTTATGTTGAATTTTCTGATACTTTTTACAGT
ATTGCTGCTTTTTAATAGTTTTTACAATAAAAACATATTTTTCTTGTTTG
CCTCTAGGGGGATTGATGGTGTTATAATGTTATTGGAATTTGATAAAGTT
TACAAAAGTACAGCTACTGTATAAATTTGATAACTGAATGCAATCGTGCT
TTTTTGGACTTGGACGTGTTTGTGATATAGGCGAATCGCAAAAAACTGTT
TGGTTCCCGTCATTTCTACTTTAAAAAGTGGGAGTCATTTGGCCGGTCAG
TCGAAAATATTTTACTGTTAAGAAGCAGCTATACATCTTGTTGAAAGGGA
ATTCGTGTGGACTGATCCGAATTTTAAAATTGAGAAACCGTGGATAAACT
GGTGTTNAATGGAATGAATGGCGATAACAGTTTAATAGATATCTCTTATC
AGACTTGCAGAAAGCGGGCTGCCGTCAAGTTACACAACATGCACACTCTG
GTCACAACTTGCACAGCCATAACAAACAGATCAATCTGGTCTTTATTTAA
CATTGTTAAATATTTCCTTTCCAGAAGGAAATATTTGTTAAAACGGCAAT
TTTTCTCCTTCTCCTTCTCCTTCTTCAAGTCTAACGCCGGTTTTGGTCAA
TTTCGTGAGTTTGTACATGAGTCTCTTTTTAAATCAAGCTCCGGTGGTAA
AAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAAAATCTTCAAAAAATA
AATTAGCGGGGGAGGGGGGCGGCTATTAGGTACCCGAGAGTAACAAAAAT
TAAAGGTTGTCTAGCCAATTTGGTTACTGCATTGTTATATTTTCAGTCGA
GTTCAGCTTGGATATACTCCGTAATCCGTAGGTTTGAACCTTCGTCATCT
TAGGAATAATCCTGCAAATATTAGCAATTACATAAACGAATTTAGAAATT
CTTGGGGACTTGTGTTGCTTGATGTTATCTGAGATAAAGCACTTTGAAAT
CTTTTGAGGACATCAATAATTATTTTATCATTTGTAAAGGAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGTGTTTATTCCGCC
AAGGCGGTAAATCATTCGCCCAAATTCATAGACCAATCAAAAGCGAGTTT
AAAGCAAAAGGGGGGGGGGAAATAAGCTCCCACGCATAGTTATGAATTTT
AAGTTTTGCTTTCGATTATCATTTGCGACCAGCAAAGTCTTCAAGATGGT
TGTGTGCATGTTGTGTAACTTGACGGTACTAAACTACAAAATTTATTTAC
CCAGACTGGAGGGGCCATCCATATAGTACATACACAGTGAAGGGGGGAGA
GGGGGTTTAGCAAAAGCGTACATCTATTGTTTAAACAAAGTCATTTCTAT
TGTTCTCTGCATACAAGGGGGAGGAGGTGTCAAATATTTGGAAAATCTTT
GCGTACGTACTATATGGACAATGCTAAAGAGAAGTATACTTTGAGCTTCT
CGTCGGGGGGGGGGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTGGAGAAGCTCTCAGGCTTGTTTTACATCAACAA
TTTTAAATCAAGTTATCAAATGTTTCACATTTTGTACATTATTAAACATA
TTTAGTCTACTCTGTTTCAGTGCATCTCTTACATCTGTTAACCCACTTCT
TAAAGCTATCTAGCTAAGCTCAAGTGGCTGACCTTCCAGCCTCGGCTGGT
TTATTTATTTTTGAATACCTAAATTTCATCGTCACGAGCAAAAACCCTGC
GCAGGCATAAAACAAAGCATAAATTATCATTGAAGAAATATTTCAAAATC
AAACCTTTAAGCTGATTTTTATCAGCTTTTTCATCTTTGACATTCTTTAC
TTCATTGGTCAAATCTGAAATTACAAAATAAAAGAATTAGCTGCTTACCA
GTGGATACCCCTTAAAACCTACAACAACAAAAAGATACCCAATTTATCCT
GATAGAGAAAACATTAAGGGCTGAAACTTTTCCTAGTGAGTCTAGGCTAC
ATATGAATTTCTCCCCTTTTTATAAAGCTGTTATGATAAATTTTATTGCT
TCGTGAAAAATGTGATTTTAGCTATTTTTACCCCGCCTTAAAACCTACAA
AATGGTTTTCTTGAATGACTTTTTATAAAATAGTCCTTTTGGTCTCAAAT
TTTGAACAGCGATTCACTGCAAAGTTACTAATGCTATAATTAGATCATTG
GTACCTAAATATTTTCAAAACTGTACGTTCAAATCAAATCACACCTTAAA
ACTTACAATCATTGACCCCTTGCTCACAACTTACTGAAACGATGAAATTG
TAATTCAGGTGCTGAACCGTGATTAATTGATCAAATACATGCTATAAACC
GATTCCCAAAACAATACTTGTATATTTCAATATTTCATGCCCATAATGCA
ATTGCGCCTGTTTTTTTTGTCAAAAAAAGGTTTGAAGGGTTAAAACTTTT
ATTCCCTTCATTTTTGACGTATGTTACTAATGTTTTTCTAAATCTTTATC
AAATTTGTGACGTTTCGGTATGCAAGATGACCATGTTTCGAGAAAGTCGA
TTTTTAGATTTCATTTGCCACTACCATAACTTTAAAATAGAACTTTNTCG
AGAAAGTCGATTTTTAGATTTTATTGGCCACTGCCATAACTTTAAAATAG
AACTTTGAGGGACTTGCAATTTTTTTTGGGTGTAACCATGGAGAAAAACA
TGATTTTTTCGTACCTACCATAAGTATAGGTACCTAAAAAGTATAGGTTT
TATGACCTTAAATTCATTTGTGTAATCTCTAGGTCCGAAAGACTTGATTC
TTTGAAGGGATTTTTGATAACATTTTCAATAACTTCGAATTTTACGACAC
TTTGCGATGGTTAAAATTCTTGAAAATAGGTATTTTAAGAAAGTATCTAT
ATTAGAGATTGTAAAAAAATGAATAGTAACAATATTAAATTAAGTTTGGT
GGTTAAGAGAACCCAAAACCAAACTTTGTAGATTTTTAGGGGTATATGGT
TTTAAGGGGTATCCACTGGTATCCCTTTAAAATAAAGTATTACTATATGA
TAGATGAAGAATTATTATTTCAAAATCAAACCTTTAAGTTCATTTTTATC
AGCTTTTTCATCTTTGACATTCTTTACTTAATCGCTCAAATCAGAAATTA
CAAAAAAATAAAAGAAATTAGCTACTTACCCCTTTAAAACAAAGTATAAA
TTATCATCCAAGAAATATTTCAAAATCAAACCTTTAAGTTCATTTTTATC
AGCTTTTTCATCTTTAACATTCTTTACTTCATCGCTCAAATCTGAAATTA
CGAAATAAAAAACATTAGCCGCCGATCCCTTTAAAATAAAGTATTACTAT
ATGATAGATGAAGAATTATTATCCGACACGCGTAAATAGCGACATTTGAT
TGGCTTCTTTGCTGTCCAATATTTTCGAATATATAGCTTCCATGGAGGCT
ACATATTTCAAAAATTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGAGCTTATAAATTGGAATTATGTTTGAAAACGAGAAATGT
TTTAGCGATAAACGGATAATAAACCATTTATTTGGACGCAGTCTCATCCA
ATATGAAAAGTATTGGGCTACGAGAAAAGATATTTTTGCATATTGGATTC
GACCTTGTCCAATAACTGCTTAATATAATTTCAAAATCAAACCTTTAAGT
TCATTTTTATCAGCTTTTTCATCTTTGATATTATTTACTTCATCGCTCAA
ATCTGAAATTACAAATTAGATGAAAATAGAAACTCAAGGTATCAAAAAGT
CCAAAAATTCGTTATTATTCCCGTATAAAACTTCTGCAAGCCGATAGATT
TTGCCTGGTGAAAAATTTTGCTCGTTTAAAACAAACGATTCAGTGTCAAG
GTATTAATATCAAAATTCAAGAGAATACCTTGCACATCATTTTTATCAGC
CTTTGAGGTTGCCTGCTGATTGATATTTTGCTGTAAGTTTTGTATATCCT
TAGTATTGTCATTGGTATCTTTCATTAAATTTCCAATCATCGCATGAATC
AAGGAATTATGTTTATCCAAAGAACACTTTTCCAAATCATAAAACTTCTG
CATGTCCTTGTACTGGAGTCCCAATAGAATATCCTCTATTCGACTCCAAA
ATGTTTTGAAAGTTAGCAAATCTGAAATGTCGGTAACAGCTCCATGCTTT
AATTCGTTTCGAAGTTTTCTGACCAAATAAAGATAAGCTCCAATAGATTG
GTCACCTGGACTAAGATTCTTGATATCCCAGCCTCCTATAGGTTTAAGAC
CAACAACAGTTCGTAGGACAGCAATGAGTAAGGTAATGTCCCAATCTTCA
GGGTTTGAAAGTTGGTTTTGAGGACAAAGTGTGTTCCATTGATCAGATTT
TAGCACTTTGTGAAGCCTATTTC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002212	XLOC_002212	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00003961-exon-sc0000038-1575043694:802191..802524	TCONS_00003961-exon-sc0000038-1575043694:802191..802524	Clytia hemisphaerica	exon
TCONS_00003961-exon-sc0000038-1575043694:782502..782633	TCONS_00003961-exon-sc0000038-1575043694:782502..782633	Clytia hemisphaerica	exon
TCONS_00003961-exon-sc0000038-1510915933:802191..802524	TCONS_00003961-exon-sc0000038-1510915933:802191..802524	Clytia hemisphaerica	exon
TCONS_00003961-exon-sc0000038-1510915933:782502..782633	TCONS_00003961-exon-sc0000038-1510915933:782502..782633	Clytia hemisphaerica	exon
TCONS_00003961-exon-sc0000038-1491911889:802191..802524	TCONS_00003961-exon-sc0000038-1491911889:802191..802524	Clytia hemisphaerica	exon
TCONS_00003961-exon-sc0000038-1491911889:782502..782633	TCONS_00003961-exon-sc0000038-1491911889:782502..782633	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000038	supercontig	sc0000038:782502..802524 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.45729	1.1404	1.68885	0.299012	0	0.575649	0	3.04174	4.93752	7.40149	4.00228	4.50866	4.83597	6.8484	7.41854	10.0578	7.54242	12.8647	7.40033	6.62199	11.5866	6.54814	6.05464	6.47116	0	1.10747	13.2476	8.71099	5.66346	5.78263

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00003961 vs. Swiss-Prot (Human)

BLAST of TCONS_00003961 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00003961 (transcript) - C. hemisphaerica