TCONS_00003948 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003948
Unique NameTCONS_00003948
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2047

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003948 ID=TCONS_00003948|Name=TCONS_00003948|organism=Clytia hemisphaerica|type=transcript|length=2047bp
AAACAATAAATACAATATACATACTATTTATTAACTAGAAATTAGAATAA
CAATTCTCATCACGATGAATGAGCAAAGatattttttgaATCCTGAATCA
GTTAGCAAACATTTATTCTGTTCAATTTGTCAAGATGTCTACAATGAACC
ACAAAGAGCGCCATGTGGGCATAGCTTTTGCAAAGAGTGCATTTTTCGAT
GGTTGAGTCAGAGCAAGACATGCCCAGAAGATAGGAGAACGGTCACAAAG
AAAGATTTGCATTACGATTTTATCTTGGCGAACATTATAGGGGACCAAAT
GGTTGCTTGTCCTTTCCGATCAAGAGGCTGCGTACATGTCGGAAAGCTTG
AATTACTGGCAACTCATCGAAAGAATTGTACATTCAATCCGATTAATCTA
CCGGACTTCATGAAAGAAGATGCGAAAAATTCCACTGTCAATTCAGCTGg
caATTGTTCGAATATGAATAGTGATAGCGACGACGATGATGATAAACTAC
CCACACCAGCTAAACCATCATTGAAAATGAGATTGTTTTGTGACGAGAAC
AAACGAGAACTATTACGATCAGTTTTCGAAAAGAATTCACCGAAAGACTC
CACTTCTGCGTCATCTTTTTCTTCCAATCGAAATCAATGGTTAGGGAAAA
AGCCCAAGGGCAGTAAAGAAAATAAACGACCAAGAGTGATTACTATAGAT
GATTCATTCTGATTGGTGATTCATTCTGATTATTGATTTTTCGTGGTGAA
GTCCTCTTCATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCCTC
TATTGGCGGTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCACC
CTGGGTGACCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGGTG
AAATCCTCTTCATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCC
TCTATTGGCGGTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCA
CCCTGGGTGACCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGG
TGAAATCCTCTTCATGCATCAGGCTCTCAATTTGCTACTTTCTGGCCTCC
ATTGCCTGTGGAAAGAGAAAACCCGTAAGGTAGTAAAGTAAAGGAAACGA
ATGATCAAGAGTGGTCGTTATAAAACCACCTTTGGCCCTGAGGCAATGAA
TGACCCAGAATGATCCTTATAAAACCACCATTGGCCATGGGGCAATCAAA
GAAAGATTATCACTATCTTAACTTATTCTTCGAATCAAAATCAGTTATTG
GGGGAAAGTGGATTAATACAATgagtagaaaataaaataatgataaaCAC
AGAACATAGACCTGGAAATGAGAACTTAACAACCTGACCGTGATTGGTGA
TTTATTTTGCATTCCTCTGAATGTATTCGGTTATCTTTTGGATTGAGTTg
tacactcccttctcacagactcggtaggattcttttagccagtggggata
aaaataacggactgaaactcgatggagatTAATATTCTCATATGTTTTAT
GaccggggatttaaattcttttgttttcaagtcagaaagttCAGTAGGGA
taggaaaaatagtaaatattctgcagcgaggattggtttatttgattatt
ttcagtggggacaaaaattggaggataatttttcaccggagacgatattt
tggccaatttttccactgGGAAGGGctcctagtgggtctgtgagaagggg
gtttaGTTTTGATGGGAAAAAAGATTTAACATTGTTGGTATTAGTAAATA
ATTggtatttaaactttttaaatgatTGAACGAAATGATATCACTAACCT
TGAAAGAATATGGACGCCTGTTCGCCTTTATCCTCGTCTTTTTCAAATTG
ATTAACAAAAGTTCGGCTTGATTCTGGTTCATCAGCAATGATTGATATTA
TACTCCAATGGTTTTCTAAAATAAACTTGTTTTGTCATGGTTTTTTGACA
TTCATATTTTTGGTATTCTACGTGAGCAAAGTTTTAAATCGTTGTAT
Run BLAST on NCBI

transcript from alignment at sc0000038:677204..693495-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003948 ID=TCONS_00003948|Name=TCONS_00003948|organism=Clytia hemisphaerica|type=transcript|length=16292bp|location=Sequence derived from alignment at sc0000038:677204..693495- (Clytia hemisphaerica)
AAACAATAAATACAATATACATACTATTTATTAACTAGAAATTAGAATAA CAATTCTCATCACGATGAATGAGCAAAGGTAAAGTCCTCCTGGTATTGGG CTCTTCCAGAAAAAAATTGAATTTAGGGGGTGGAGGAGGATATGATTATG ACATTTTTTTGGAAATTAACTACCCAGACATTGTGACTTTTGACCCCCCA GACAGCATGTCTAACCCCTCGGACAAGCATTAGTTGACCCCATGGACAGT CAAAATTACTCTCAAACAGAGCAAAACTAAAAAAGGAAGTTTAACCCCGG ACAAGGCAAGTTTTGTAGATTTTTACTACCCCTACTAAATCCTACACCCT CATATATACAGACATTTTCTGGAGGAGCCCATTATTTGAATTTTTCTTTC TATAGAACAAAATTAGAATCCTCTAAATCAGAACAGACAATTCTTTTTAC ACTTTGACTTTTTAAGGATGGTTATATAAATAGGGATAGAGGGTAATGAT TATTTCGAACATTTAGCATTTACAGAAAGAAATGACTACTAGGCAATAAT GTATTCAGATTTTCCGTGTTTTTCAGCCAGAAACAGCTATTTTGTCCAGT TTTTGCGCTTTTTGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCT ATACTTGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTGTTTTCTCGAGCTAAAATTTTCATTAATTTTTAACCA TATGATTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCAAAGT GTCCGAAAAAAAATTGGAAACATAGTAATTTCGATTCCCCTACCCCTTAG CTGTGCTTCTAACAAAACAGTCGAGCGATTTTACAAAATGCCCTCTACTA TACCATCGAAAATGAAATATTTGATAAATGTTTTTAATTGAATGATCCTG TATATTTTTTCAGATATTTTTTGAATCCTGAATCAGTTAGCAAACATTTA TTCTGTTCAATTTGTCAAGATGTCTACAATGAACCACAAAGAGCGCCATG TGGGCATAGCTTTTGCAAAGAGGTATGATAAATCTGATTGATGTTGGGTC CATTAATTTTAGGGAGTGGTCAGAAAGTATCTACTAGGGTGGGTTTGCAG GGGGGGGTCAAGATCCAGATACCAAACCCAGGGCCGGGGGGTGGTGTCAA TTTTTTTTTTCAAATTTCAAAAAGTCAAGTTGGTATTGATACCAAAATGA GGGGGTGGGGTCCCCTTTTTTTGAAAATTAGGGAATCTTTAAGTTGGTAT CGATACCAAAATGAGAGGTTGGGTCCCCCTTTTTTTANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGTGGTACATAATATAAGTGATTGATA AGAGGAATGTTCTTTGAATAAAAACATCCACAGATTTTGTTTAGCATCCC TTGTATGCAGTATCCTATGCATATAACTCCTTGCATTTTTACTGATTGCC AATTTAGGGGGGGGGTCCCCCTTTTTCAGAAAAATCGGGATTTTCAAGTT TGTATCGATACCAATTTAGGGGGGTGGGTCCCCCCTTTTTCAGAAAATTG GAGTTTTCGAGTTGGTATTGATACCAATTTAGGGGGTGGTGGTGTCTACT ACTTTCAAATCTCGAAAAGTCAGGTTTTTGGGCCCTGGGTTGGTATCCTG GACCCTGACCCCCCCCCTGGGGTTTGAGGACATTTTCAAAAATACCAAAA AAATTCACACCCTTCCCTTGATATACTCAAAACAATTTCAAGCCCCTACT AATATAGGCCACCTCTCAAAACGTATGATTTGAGGTTACAATAATAGCAG CTGCTAGAGGCGTTCTGGCATCCTGGAATCCTCCACCCCCTCCCTAGTAG ATACTTTTTAACCACTCCCTTACCATCATCAAAGGGAGACTCAAATATCG ATCTGTTTCGATTTTCAATATTTACTACTTTCTGTAAAAAAGTGGACCCA AATAAAACAGTGGTACGATTAAGGAAGTTAATCGATTAATTTGATTTGCA TGGATCTCCATGTTTAAAAAAAGAGACAGTGAAGGCCAAATGCTTAAATT CTCTTCTTTGAAATTCTATGAAATGCAAAAAGGTAAAAAGGTGGCCCACA TCAAGCATAGTTAGTTAGCTCTTATTTGCAAAACTTTCTTATGGCTATGG TTCATGGAAAGAATACATGTGAACGATACGAGTTTATACTAATAATGAAA AAGTAAATCGTGTAATTGAATCGTGTATGAAAAAAAACTAAAAACTTTTT ATTTTGCCACTGTTGTTGATGTTCGATCTGTTATCTCGATTTTTCTTGTT TCTTTGTTTTAGTGCATTTTTCGATGGTTGAGTCAGAGCAAGACATGCCC AGAAGATAGGTATTTACTATTTTCTCCTGGTTCAGAGAAATCTTAGGAAG AGCCTGGAAGAGCGTGAAAATAAAATGTTTCTTGGTTAGATACAGGAACC GTGAGCGTAAGGTTGAAATCTTTAAAAAAATTTAATCAACTCTTTTTTTT ATAAGCGTACGGGAAAATCGGGTCGATGCTCAATATGCTTGGGAAAATCT CATTTTCAGCCTTAATTTATGCTTTAAACACATGGATAATCATCAGTGGT TTGGCTCAGTCAGATAGATAACTTTTCACTCAACTGCAACAGCAATTATT TATATACTTTTCAGCAAGAGCAGGCAACAGGGACTTTTCCAGAAATGATC TCGTGTTATTATGGTTTTTAATAAAATACTTTGTATGTGAGAAAACAAAG ACAGTAAAAACCGCTTTTTAATATTTCTATTATAGGAGAACGGTCACAAA GAAAGATTTGCATTACGATTTTATCTTGGCGAACATTATAGGGGACCAAA TGGTTAGCCATTTTTAGGTTGCTTTTCCGAAAGACACTCTTTTTTCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNAAAACTAGAGTTGAACAAACTGAATCAAGTCTTAGCAGATCTT AGATCTTTTTTAGTCGTGATAAAATTTTTCTGTACATAACGTTCATCATA CAGGCTATGTAACAAAGACTTAAGGCGTGCCTAATACAATGAGTTTTTTT ATCTAGTCTAGTTTATCAACTAGCCCGGGGGGGGGCAGTGGGTTTCCCAA CTGACGGTATGTGCGTCGAAAAAATGGCTTTTAGAATCGCACCCTTACAG TGCAGAAAAAAATCGGTGAAATTCATACCCTTTTCAAATTTTAGACTCTT TTAGAGCAAAAAAATCTAGATTTTCGAGCCAAAATTTGCAATTTTTCCTA GATTTGCTGAAATTTCCACCCACCCAGTGCATTTATCAAAAGTCCACCTT TACAGTGCATTTCTGATATTTTGAAAAACATACCCTTAACCGCCGCACAT ACCGGTCGGTCAATTTGCCTGACTGTCCTCCCCCCGGGTCAACTAGTTTT ATGAACTCGATACATTTTGCCAATTTAGTTCCAGAAACTTTATTTACGTT GTGTTAGAATGAGAAAAACTTGTTTTCATTTTCAGGAGTCTAAAGTGTGG TACATAATATAAGTGATTGATAAGAGGAATGTTCTTTGANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAATCTCATTTTCAG CCTTAATTTATGCTTTAAACACATGGATAATCATCAGTGGTTTGGCTCAG TCAGATAGATAACTTTTCACTCAACTGCAACAGCAATTATTTATATACTT TTCAGCAAGAGCAGGCAACAGGGACTTTTCCAGAAATGATCTCGTGTTAT TATGGTTTTTAATAAAATACTTTGTATTTGAGAAAACAAAGACAGTAAAA ACCGCTTTTTAATATTTCTATTATAGGAGAACGGTCACAAAGAAAGATTT GCATTACGATTTTATCTTGGCGAACATTATAGGGGACCAAATGGTTAGCC ATTTTTAGGTTGCTTTTCCGAAAGACACTCTTTTTTCTTTAAAGCATTCG GAAAAATCAGATCGAGGCTCAATGTGCTTATTAGGAAAATCTCTTTTTCA GCCTTAATTTATGTTTATTTACTTACTTAGGCTTTGATTTGTTGATTTTC TTTGGGTTCATGAAAATTTCGAATTTTTAAGTCAAAACATTGATTCGGTT CAAAGAATGAAAGTTTTCTTTTTGTGATTTGGCGCTGCAGGTGAAAATCT TTGGTCTAAGAAAGCTCAAACAGCTTTAAAAGTAACCTTAAAAAGGTCAG CGTTTTAGAAAAGCTGCACGATTATTATTTCATTTCAACTTGGAGGTATG CTTGGCATTATGCTTATTTTTTACTGAATTTGAGCCTGAGTATGCTTATA AACGTTATGCTTATAAAAAAAGAGTATACACTTGCCAACCATGGTTTGGG TTTATGAAAAAACTACCAAACTCTGGGTTGAAAAAACCATGAGGTTAATT GAATTTGATTTGTATTACATAAAAAATTGTATATTGTATTCATTGATGAT AATTAATAAATCGAGGCTATATACAATGAGCAATGAGCAGTGTTTTACAG TACTCGATACATATGGAAGTAAGGAAGAAAAGACACTTTTTTCCGCTACT GTTAGTTTCATGCCACTTTGGTGTCGATCTGCCTGGATTCTTCCTTACTG CTATTGATAAAAATATACTTTTACATTACTACGATGTAGGTTGCTTGTCC TTTCCGATCAAGAGGCTGCGTACATGTCGGAAAGCTTGAATTACTGGCAA CTCATCGAAAGAATTGTACATTCAATCCGATTAATCTACCGGACTTCATG AAAGAAGATGCGAAAAATTCCACTGTCAATTCAGCTGGTATGTACACATT TTATTTTATACAAACTGGGAATGACTTTTGTTGTTTTTTGTTTTTTATCA CAACTTTTTTTCACAGCTTTGGTGATATTTTCTACTTTATTGTCATTCGG GCTTGAAGGTCGCCGGGTTATTTAAAAGCGGTACTACCTACTGCTTTCTT CACAAGGATTCAATTCAACTTCTAAGATTACATAATCTCTCAACAAAAAA TCCCTTTCAATTTTAACGCTCGTATCAATAGGTAATTGCTTCTTCTTAGC CTCTTCCGTCCAATTAAGGAGACAAATGTTTTTCAAACCACTTGGTATCC ATAAAGCAATCCATAGATCTTTTTCATCCGTTGATAAATTACAAGCTGTG TCATATTCTGCCGTGATCTGACAAAAGGAAGTAACTGCATTTTTCCTATT TTGAGATAATTGCATAAACGAGGTTGACCTTATTCAAGATCAATGGTATC GTTTTAAGATCAAAACTTTTGCTGATTGTGAAAGACCAAACCCTAGAATA GTATAATATTTAAAAGGAAGGAGTTAAAAGAAGTTTTAACATCTTGATTT TGGAAAAATCCAGACAAGTTTTACTCTACTCAAGCTCTTTCAAGCTTAAA ATTTTAGAGTTACTTCTTTTTGTCAGAAAATAAACTGCAAAATATTGCAA GCAACTTTAATTTTTCAGGCTATAAAAAGAAGTAAGTGACTTACTTCCTT TTGTCCGAAAATAAAATGAAACTTTAGTCCAAAAAAATTGATAAAAAGAA GTCTTTTACTAGAAATCAACTACTGGAAAACACAAGCTGGACTCTTAGGA GTTGATTTTTGCAAAAATATGAATTTTCAAAAATTGATGGTTACTTCCTT TTGTCAGATCACGGCAGTTTCATATTTGCACCATTTCTCTCGACTTGTCG CCTTGTTGAAAACTTCAACATCGTTGTATATTTTAACACCTATTCGATCC CTAGCGTATCCATAAAACTTGATATATTTCTCTAAAAATTCACCAGGCTG CATCTTGTCGGACATGCGCACAAGCCTTTGAGACCATGTTATACCGTATA TAACATCACTGTACAGCACCATTATTTTATTCAATCTTTGAAGTAACTGA CATTCCTCTTGATTCTCGTTTTTCAATCCTTCAATTACTGCGTGGCAAGA TTTAAGCTCTTTCCCATTTTGATCAAGGTCGGCCTGTTTAAATACATACA GAGTAAATTTGTTGTCAAATACACGGTGCTGTGCCAAGAAATTATTTAGC AAACACAATCTGTCGCAAAATGTTTGGAGGTCACATAGATCCTTCGCCCG GTTTTTAAAATCATGACATAACTGTCTCAATGCACTCGTAAGATCATTCG TTACCGTCTCTTCTACCGTATCCAACTTTTTTGCCACACTATCTAAATCT TTTTTTATCAGTTTCGTGATGGTGCCGTTAATTTCTGCCTTGGTCAATTG TTCACATGCCTGGTCAACTCTTAGGTTCTCAGCATCAATTCTTCCACTAA GGGCAAGATTTTCTTTTAACAATACTTTCTTCTCGTTTGTTGCGATAGCT TTCGATTGAGCATCGATCTTGGTTTTCATAGCAATATTCGTTTTCGTTAC GGTTTCAATGTCCTTAGCATTTTGCTTTACTGTCTTCTGTAAGTCAGCAA TTTGTTGGCTTTGCGTATCAATCGTATGTTGATACTTGACTCGTTCTTGG CTGAAAAGACTGAGAGACTTTAGGACTAGAATATCATGGGTAGATTTTTC GGATACCATATGTGTTTGTAGCTCTCTGCGTTTGACCTGAAAAGCCATGA GATTTGTTTGAAGTGCTGGTAGAGAGAATCTTTGTAAAATTGGAAATTTC TCGTCAGTAAAAAGTGGGCAAAGACTCTAGTGAAGTTTAGATGGCTATGA TCTATTAATTACAGTGTGACCATAGAAAAAAGTATATAATATAGAATATA ACTCAAAATCCTCAAAACTCCTCAAGTTCGAAGTGATCATTAATTTAGAA GACGAAAACTCGAAAAAAAATCCCATATTGCACTCGGTACCGTGCGATAA CTATTGCTTATCCTTCATAAGTCATAATAAGCAGAAATAAACAGTTCCAA CAAATTGGGGATGAGCTAGAGTTTTTACAAGATACTTCACTAATTGGTCA TTTAAAGTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTT TTATTACATCTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAAACTC CAGCTTGTCCCACAAATTGAATGCTTTAGATATTTTGTATTACTACAATT AAGTTAAATTAAAAGTTAAAAAAAATTGTCATTACCTTAGCGAAACACCC AATTTCAGCAAGGGCATGGTATTATCAAGAAATCGCATTTCATCTCGTGT TCCTGTGTTAATAAATAGGAAGAGTTATGCTTAAGAACTTCATGATCAAG GAGGCCACTCAAGCGGTAAGTCTGATCACGATATCACGCAATTTTTTGTG TTCGATCACGATCACACAAATTCAGCAAAACATTTTGATAATCATGCATC CCTTTGAAAAAGTCCAAATCACGCATCACGGCTCAAAAATCTTTCAAATC ACGATCACGTTTTGACCTCTGATCACGCAATCACGAAAATAAAAATTCTA AATCGCGTAATAACGCTTGAAAAAAGTCCCTATCACAATTTTTTTCACCA AAACTGTTTGGAGGGCCTCACTAAGCACAGTCAATTCAGGTTAGCATACA ATGGAATTTTTAATATAAACAAATTTGGAAAAATCTCAAAACTAAGCTGC CCCCCCCAGGTTGCAATAGAAACGTCCTAGGTGGGAAATTGAGGTTGCAA TAAGAATGTCTTGGGTGGAAAATTCTCGAAAAATTAATTAGCAGGGGGGG ACGGCTATTAGGTACCCTACAGTACTATGGAATAGTTATACCTGATAATC TTGGATGCAACCGACCCAGTTACAATCTTTCTGTAGACATTTAATTGGAA GTGATGTTTGAATCATTCTGTCTGTAGATTTGACGTGATATTTCTGTCAA ATATGAATCAATTTAAAAGAAGTTGAAATTCTCTTTTAAAAATGAGAATG ACCAATCGAAGTACTTTAGGTGTACAAACTTTCGCGAACAGAAAATTTCG CGAGGTCGAAAAATCGCGAGGTCGAAAAATCGCGAAATTCACGACATTTA CTTTCGAGAATTTGAGGAAAAAATATTTTTCGCGAGCATGAACTTTTGCG AATCATTGGATAAAAATGAGAATTTTTAAACAAAAATTTTCCTTGAATCT GGTAAACACGGTTATTTACCTTATCGGCCAAAACTTAGTCGGCCCAAATT TTTAGTCTGGCCCTAATTTTAGTCACCAAGCCAAAATTTAGTCACTTAGG GCCGACTAAGTTTTGGCCGATAAGGTATTTAAAAAAGCGTTAAAGGCTAG AAATATGCTGAAAATTTTATATTTATTAAGATTTCAAAGTTTTATAGATT TTCAATTTTTTAAAGAAAATTTCGCGAGCATAAACATTCGCGAATTAGCC TGTTAAGAATTTTCTAAGACATTAACTTTCGCGAAAAAGGCCAAAATTCG CGAAAATCACGAAAGTTACTGCTCGCGAACGTTTGTACGCCTAAAGTAAT CGAAAAATTGAAAAAAACATTGCATTCAGAACAATTTTCACCGCTTTTTG ATTTTACTGATGGGTGTGGTCAGTACCTTTTATAAGCGCTACGAAAAAGC AAACCAAGGGACAGGGTAAAAGCTTGCTTTTTATTTTATTAGAAATAACG ACAAGAGAAAAAAACCACAAAATCTTAACACTTAATAGCCCCATCGCTTG ACAGTATAAGGATAAAATTAATGTTTACCTTATTTGGGTCGTATGCGGTT TGGCAGATGCTGCAGTAAAATAATGCTCTTTCTCCTTCCCTGTCTCTATG GTAACATAAAAAATACGATCATGTTTAACTCACCTTTTTAGTAAGATAAA CACTAAACTCCAATCCCTTTAAACGTGTACTCCAATCCCTTTTGAACGTG TACTCTTTTTTTCTAGCATGTTTGTTGAGAGTACACATTTTTTTAGAGGG AAACGTAGTGAATTTATATACACTGAAGAAAATACAAACTAGCGACTAAC CATGACAATCTGTAACAAAAGCCCAATATACATATTGGAAGAAAAAATGA AAAAATAAAAAACAAGGAATGCACAAGACACAAAAAGGAAGTACATGTTT TTTTTATAAGCATACAAAAATCCGAAAACAGGCTCAGAGATGCTTAGGTG GAAAGCTTAATAAGGCTGAAAAATGCTTGAGGGGAGGCTTAAATCCAAAG CATAAATTCAGAGAAATACTGAAAATCCGTAAAATTCCAGCCAAAAAAAG CCAAAATCAGGCAGGGGGGGGGCACGCAGTTACTACAAGACAGTATGACA CTTACTACCGTGGTGGTACTGTATTCAGAAGTTATGAAAACAGTTACTAC ACAGTGTAGTAACTGCTGTTTGGGGGTGGTGCCGAACACTAAAACTAGCA CTTTTGGTGTAGTAAGTGCTTATATTTTAATTATTTTTAAAAAAGTTTCA AAATTTTTCACAAAAAATGATTTTTTTTGTGAAAAAATTCTTTGTTAAAA AAAATATTTTTGTTATAAATGGACGAAAAAAAAATTGAAATTTTTCTCAG ACCCAACTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTTCTCAA CAGCTGTTAACCAAGTAAATTAAAAGAAAATCTAGCACAAAAATGGCTTT AGGTTGAAAAATAATCACAATTTAGGGTAATTTCGAGCATTTTTTTGATG ATATCACTCAAAAACAGGGGTGGTACATGGAAATCTTTTCTGAAAACAGT TACTACCAAGGTGTAGTGACTGCAAAGGGTGGTGGTCCTGAAAAAAAGTG TTGAAAAAGCACTTACTACACATCATGTCTTGTAGTAACTGCGTGCCCCC CCCCCCTGAATCAGGAAAAAAACATTTTTCGTAGGCCCAAGTAATGCTTG CCATATGCTTAAATTTTCCCCATATCTGAGCCTAGATATGCTTATAAGTG CAATGCTTATAAAAAAACACATGTAATAAGCTGAAGACAGAAGCATATCA CCAGGCTTTAAACTAAAAACACTGAAGCTTTGCCTAACCATATGCGAAAC CTCAGTTTATAAATCTAAATGGATGTCGTACCTTTTAGCTTTTTCTTTTT GTCCCTCTTCATAATGAAACAGACAATCATGGCACATTAAGTGTTCACAA GGTAGTTCTGTTGCCTTCCTCATAATACATAAACATATCGGGCATTCGAA CATTTTACGATCAGGGCCATCGACTTCAAATTGAAAACCTGTTGGTGACA ATTTCATCTTTTCAAGACACGTCTGACATTTATTGTTTTCGTCTGTGACA GGTGTCATACAAATTGTACATTTTGGACAGTCTACTACGCATGCTCCCAA AATTTGCTGCTCTTCAGATGCAAATCGTACTTCTTTGCTTGATGCCATTT TAAAAATCTGCTAAAAGAAACAATGTTACACGTTTTTTTTTTTATAAGGA ACCTTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACAGAGAACATC AGCCTCAAAGTTCCTTATCGAGTTCCTTATTTACAAAGCTGCTAAGTTTG GATTCGCAAAATATTTAACTTCTTTATAAGTATAACTTCTTCTCAGCCTG AGCAGTTCCTTAACTATTCCTTATTTTTTGGACCATTTTCAGCCTCGAGT TCTATATAAACGTGTTCCTTCTATAAAATAAACGTGTAGCAATAATACAC TCCTTTTTATATAAACCATTTTTATAAGAGAAATGAGGCTTCAAGCTTCA GATTTTCAAAAAATAAAAACAGTTTAAGAACAACGTTGAGCTTTGAATGG CTGAATTAAGGGTTAAAATAGGATATTAAACCTGAAAAACTTAGGTTTTT AAAATTAGAAAAATTTTAAGCTGAAAGTGCCAAAAATATAAATTTTTTAT AAAATGAGTCCAAAAACCGGTAAATTATTCAAATAATATAACATTTCAAA AGAGTAATGCTAATGCTGTATCAAAACTTTAAACCCTAAAAAATAAATCT ATCATAATAAAACATTTTTGCTTACATCTCCGTAAGTATTAAAAAAACCT CACATGATGCTGAAACTCTCGTCGCACTCTCCTATAAACTCAATAAACAA TATTGACTTATGATTGCAAAATTATGTGTCTTTGAATCCACTTGATCGAT TATTTATTCAATTCTGAGAATGACAGTTTTATTCATTTTATAAGATTATG AATCCACGTCCTCAGTATTGTAGCTCTTTTCAACTTTGCAGCAACCCTTT GATTTCATATTTGTTAAATTTAAATCATATCAGATCATATCAGTATCGTA GCTCTTTTCAACTTTGCAGCAACACTTTGATTTCATATTTGTTAAATCCT ATGAGTTGAAATTAATTTCAATTTTCCGGAAACACTAAATTTTTTTATTT TCGCCTTATATTATGATTTTTTCCTGACACCTGTGTATTTTTGTCTTGTT GAAGCGACCTATCAGAATTCCAAGATACCATTTATGAACTAGGCAAAACA AAGCTTCAGGATAGACTTACTTATATAATTTGCTCCTTTGTTTAATTCCT GCTAGTTCTGAATTAGTCGTCTAGACTACGCTAGCAATATAAAACAAATC TTTCAATTAGGCTATTCCATTTAATATCCATACAGGGGGTGAACGAACAT TTCCAGCAGGTTATACGACTATTTCCTAGAAGAATTTCTAGTGGGTCCAA GGAAAGTACACGCTTTTTGAAAATTATGAAAATGGCCAAAAAACTAAGAA TATGCTAAGAATATCACCATGGAATTTTGCTACTCAAGCTAAGAATGCCA TTTTAAGAGCATTTCCAATTATAAATTATCAATTATCCCCAAGTTAGGCC CAAGTTAGACTCACTGCTTTTACAAAAGTGCCATTTTATGCTTGAGACGT ATGTACTAAATGTTAAATCTATTATGAATTAGGATCCTAACCTAAGAATG AGCTGTAAGAATATTTTAGGATGATTTTCCCAAAAACGTTAAGAATATCC ATGATGAAATGGATTTACACCATTCTTATAAAAAAGCGTGTATTTTAAAT TGTTCTAAGGGGTAAAATACTGGTTTTAGTTCGTCCACCCTCACTTTAAA GGTATGACGAAGAATCTATTTGTTATTTTGCTACTTTAGAGAGGTGAACA TTTTCATGAGTTATTTTTGGTTTGAGAAGGCTCGTCCACCCCCTGCTGCC CTCTGTATTGATATTGAATGTAACAGTCTACTTATTAGCAGGAGATATCC TAAAAACAACCTCTCTTTTTGGTAGGTATGATAATAATCAAGTTTGTAAA GCTCTTTTTTATTTTTTCAGGCAATTGTTCGAATATGAATAGTGATAGCG ACGACGATGATGATAAACTACCCACACCAGCTAAACCATCATTGAAAATG AGATTGTTTTGTGACGAGAACAAACGAGAACTATTACGATCAGTTTTCGA AAAGAATTCACCGAAAGACTCCACTTCTGCGTCATCTTTTTCTTCCAATC GAAATCAATGGTTAGGGAAAAAGCCCAAGGGCAGTAAAGAAAATAAACGA CCAAGAGTGATTACTATAGATGATTCATTCTGATTGGTGATTCATTCTGA TTATTGATTTTTCGTGGTGAAGTCCTCTTCATGCATCAGGCTCTCAACAA CATTTGCTACTCTCTGGCCTCTATTGGCGGTGGAAATGTGAAGATCGAAC ATTGAAAGAGAATGAACCACCCTGGGTGACCACTATAGATGATTCATTCT GATTGATGATTTTTCGTGGTGAAATCCTCTTCATGCATCAGGCTCTCAAC AACCTTCTTCCTCCATTAGCTTTGGAAAAATAGAAAATCAGAAAGTAAAA AGAAAATAAACGACCTAGAGTGACCACTATAGATGATTCGTTCTGATTGG TGATTCATTCTGATTATTGATTTTTCGTGGTGAAGTCCTCTTCATGCATC AGGCTCTCAACAACATTTGCTACTCTCTGGCCTCTATTGGCGGTGGAAAT GTGAAGATCGAACATTGAAAGAGAATGAACCACCCTGGGTGACCACTATA GATGATTCATTCTGATTGATGATTTTTCGTGGTGAAATCCTCTTCATGCA TCAGGCTCTCAACAACCTTCTTCCTCCATTAGCTTTGGAAAAATAGAAAA TCAGAAAGTAAAAAGAAAATAAACGACCTAGAGTGACCACTATAGATGAT TCGTTCTGATTGGTGATTCATTCTGATTATTGATTTTTCGTGGTGAAGTC CTCTTCATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCCTCTAT TGGCGGTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCACCCTG GGTGACCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGGTGAAA TCCTCTTCATGCATCAGGCTCTCAATTTGCTACTTTCTGGCCTCCATTGC CTGTGGAAAGAGAAAACCCGTAAGGTAGTAAAGTAAAGGAAACGAATGAT CAAGAGTGGTCGTTATAAAACCACCTTTGGCCCTGAGGCAATGAATGACC CAGAATGATCCTTATAAAACCACCATTGGCCATGGGGCAATCAAAGAAAG ATTATCACTATCTTAACTTATTCTTCGAATCAAAATCAGTTATTGGGGGA AAGTGGATTAATACAATGAGTAGAAAATAAAATAATGATAAACACAGAAC ATAGACCTGGAAATGAGAACTTAACAACCTGACCGTGATTGGTGATTTAT TTTGCATTCCTCTGAATGTATTCGGTTATCTTTTGGATTGAGTTGTACAC TCCCTTCTCACAGACTCGGTAGGATTCTTTTAGCCAGTGGGGATAAAAAT AACGGACTGAAACTCGATGGAGATTAATATTCTCATATGTTTTATGACCG GGGATTTAAATTCTTTTGTTTTCAAGTCAGAAAGTTCAGTAGGGATAGGA AAAATAGTAAATATTCTGCAGCGAGGATTGGTTTATTTGATTATTTTCAG TGGGGACAAAAATTGGAGGATAATTTTTCACCGGAGACGATATTTTGGCC AATTTTTCCACTGGGAAGGGCTCCTAGTGGGTCTGTGAGAAGGGGGTTTA GTTTTGATGGGAAAAAAGATTTAACATTGTTGGTATTAGTAAATAATTGG TATTTAAACTTTTTAAATGATTGAACGAAATGATATCACTAACCTTGAAA GAATATGGACGCCTGTTCGCCTTTATCCTCGTCTTTTTCAAATTGATTAA CAAAAGTTCGGCTTGATTCTGGTTCATCAGCAATGATTGATATTATACTC CAATGGTTTTCTAAAATAAACTTGTTTTGTCATGGTTTTTTGACATTCAT ATTTTTGGTATTCTACGTGAGCAAAGTTTTAAATCGTTGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002209XLOC_002209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003948-exon-sc0000038-1575043694:693418..693495TCONS_00003948-exon-sc0000038-1575043694:693418..693495Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:692324..692432TCONS_00003948-exon-sc0000038-1575043694:692324..692432Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:690587..690633TCONS_00003948-exon-sc0000038-1575043694:690587..690633Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:687653..687719TCONS_00003948-exon-sc0000038-1575043694:687653..687719Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:686759..686906TCONS_00003948-exon-sc0000038-1575043694:686759..686906Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:678805..679275TCONS_00003948-exon-sc0000038-1575043694:678805..679275Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1575043694:677204..678330TCONS_00003948-exon-sc0000038-1575043694:677204..678330Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:693418..693495TCONS_00003948-exon-sc0000038-1510915933:693418..693495Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:692324..692432TCONS_00003948-exon-sc0000038-1510915933:692324..692432Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:690587..690633TCONS_00003948-exon-sc0000038-1510915933:690587..690633Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:687653..687719TCONS_00003948-exon-sc0000038-1510915933:687653..687719Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:686759..686906TCONS_00003948-exon-sc0000038-1510915933:686759..686906Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:678805..679275TCONS_00003948-exon-sc0000038-1510915933:678805..679275Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1510915933:677204..678330TCONS_00003948-exon-sc0000038-1510915933:677204..678330Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:693418..693495TCONS_00003948-exon-sc0000038-1491911889:693418..693495Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:692324..692432TCONS_00003948-exon-sc0000038-1491911889:692324..692432Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:690587..690633TCONS_00003948-exon-sc0000038-1491911889:690587..690633Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:687653..687719TCONS_00003948-exon-sc0000038-1491911889:687653..687719Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:686759..686906TCONS_00003948-exon-sc0000038-1491911889:686759..686906Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:678805..679275TCONS_00003948-exon-sc0000038-1491911889:678805..679275Clytia hemisphaericaexon
TCONS_00003948-exon-sc0000038-1491911889:677204..678330TCONS_00003948-exon-sc0000038-1491911889:677204..678330Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:677204..693495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.961865 1.14475 0 0 10.9149 10.1361 8.17726 7.77151 3.7763 4.57588 5.03718 3.42152 2.26448 3.71531 2.93536 3.46637 5.2641 4.20265 2.67034e-09 2.08619 2.09571 0.982404 2.61542 2.03018 8.23466 8.62433 0.474175 0.625062 2.7028 1.70088
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003948 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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