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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003928 ID=TCONS_00003928|Name=TCONS_00003928|organism=Clytia hemisphaerica|type=transcript|length=1201bp ATGAAGAATTTGGAAATCAAAGATGAGTCAATTCAATCCAGGGATCATAC AGtggaacattggaacatatACGATCCTGTCTCCGTTTTCTATGGTCGTA AGGAActtatcaaaaatattcactCAGCACTTGATTCAAATCAAAGAGTC GTTTTGACTGGGTTGGGAGGTGTTGGAAAAACACAGACTGTTGCCAAATT CACACAGTTATACAAAGATGAGTACCAAAAAGTCTTTTGGATAGCTGCTG ACAATCTCAATAAAACAATGGACGAAATCATCCGCTATTTTGGATTTGGT CAATATCTTCCAAAAGATCCTTCGACTGAAATGTTGGTCAAGTTATTGTT ATCAAAAGTTTGCAAAGTTGAGGAAAAGACTTTGATTATATTAGATGATG TTACAAACTTATcatctaaagattttaaaagtttactTCGTCATGACAAG CACAAATTATCATTACTTATGACATCACAATTGACTGATTGGGAGGATCT TGCAGTCACCAATATAAGAGTTCCTTGCTTTGAGGAATATGAATCTGTTG GATTTTTGGAAGGTCAAATCCTTGATGCTTCTGCCGAAGATATTTCAACT CTAGTTGGCCATCTACAATGTTACCCTTTAGCTTTACATCAAGCAATATG TTATATACGTAAGTTGAAAATTACTGTCCCATCTTATATTGAGCAATTTG AAGCTTGCCGCAAAAGTGTTTTAAGCATGAAAATAAAGTCATTTTCAGAC TATGATAAAACATTGTTGACAGTTTGGGATATGGCATTTCACAAGATAAA TGAGGAATCGAAAAATGCTATTTTAGTTTTAAGTATGATGGGTTACATGG ATAATAAGagaatcaataaaaaaactttcacttaTTTGGATAATATTGAT GAAATTGATGTAGATGAAATTGTTTATTTACTCGGTCAATATTCTCTGGT TAATGAAAGAAATGGATTTTTGGAAATTCATGCCCTTGTTCAAAAAATGG TAAGATATTGTGTTGAAGAACAGAATTTAGTTGAAGATGAATGTCCCAAA AAACTTGTGATGGATACAATTGAAAAGATTTATAGCTTTAAAAAGGAAGA TTTAAAAAACCTTGCAATGTATTATGATGATGAAGATTTATGGTATGCCC ATGTTGTTTATTTAATGCAAAATCACTTTATCGACAACCATCAAACTGAT T Run BLAST on NCBI transcript from alignment at sc0000038:793740..795133+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003928 ID=TCONS_00003928|Name=TCONS_00003928|organism=Clytia hemisphaerica|type=transcript|length=1394bp|location=Sequence derived from alignment at sc0000038:793740..795133+ (Clytia hemisphaerica) ATGAAGAATTTGGAAATCAAAGATGAGTCAATTCAATCCAGGGATCATAC
AGGTTTTAATTTATACTATATCAAATTCTCTATGAAGAGTTTTGCCGGCA
TAATTGAGTtgcttatttttttcaattttgctattttccacTTTATCTAA
ACACATTATGATGTGAATTCACTACagatgatttttattttttttatgca
ATTCAACGACATCGGTATCAAACCAATTACTTTTATTTTCCATagtggaa
cattggaacatatACGATCCTGTCTCCGTTTTCTATGGTCGTAAGGAAct
tatcaaaaatattcactCAGCACTTGATTCAAATCAAAGAGTCGTTTTGA
CTGGGTTGGGAGGTGTTGGAAAAACACAGACTGTTGCCAAATTCACACAG
TTATACAAAGATGAGTACCAAAAAGTCTTTTGGATAGCTGCTGACAATCT
CAATAAAACAATGGACGAAATCATCCGCTATTTTGGATTTGGTCAATATC
TTCCAAAAGATCCTTCGACTGAAATGTTGGTCAAGTTATTGTTATCAAAA
GTTTGCAAAGTTGAGGAAAAGACTTTGATTATATTAGATGATGTTACAAA
CTTATcatctaaagattttaaaagtttactTCGTCATGACAAGCACAAAT
TATCATTACTTATGACATCACAATTGACTGATTGGGAGGATCTTGCAGTC
ACCAATATAAGAGTTCCTTGCTTTGAGGAATATGAATCTGTTGGATTTTT
GGAAGGTCAAATCCTTGATGCTTCTGCCGAAGATATTTCAACTCTAGTTG
GCCATCTACAATGTTACCCTTTAGCTTTACATCAAGCAATATGTTATATA
CGTAAGTTGAAAATTACTGTCCCATCTTATATTGAGCAATTTGAAGCTTG
CCGCAAAAGTGTTTTAAGCATGAAAATAAAGTCATTTTCAGACTATGATA
AAACATTGTTGACAGTTTGGGATATGGCATTTCACAAGATAAATGAGGAA
TCGAAAAATGCTATTTTAGTTTTAAGTATGATGGGTTACATGGATAATAA
GagaatcaataaaaaaactttcacttaTTTGGATAATATTGATGAAATTG
ATGTAGATGAAATTGTTTATTTACTCGGTCAATATTCTCTGGTTAATGAA
AGAAATGGATTTTTGGAAATTCATGCCCTTGTTCAAAAAATGGTAAGATA
TTGTGTTGAAGAACAGAATTTAGTTGAAGATGAATGTCCCAAAAAACTTG
TGATGGATACAATTGAAAAGATTTATAGCTTTAAAAAGGAAGATTTAAAA
AACCTTGCAATGTATTATGATGATGAAGATTTATGGTATGCCCATGTTGT
TTATTTAATGCAAAATCACTTTATCGACAACCATCAAACTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00003928-exon-sc0000038-1491911889:793740..793791 | TCONS_00003928-exon-sc0000038-1491911889:793740..793791 | Clytia hemisphaerica | exon |
TCONS_00003928-exon-sc0000038-1510915933:793740..793791 | TCONS_00003928-exon-sc0000038-1510915933:793740..793791 | Clytia hemisphaerica | exon |
TCONS_00003928-exon-sc0000038-1575043694:793740..793791 | TCONS_00003928-exon-sc0000038-1575043694:793740..793791 | Clytia hemisphaerica | exon |
TCONS_00003928-exon-sc0000038-1491911889:793985..795133 | TCONS_00003928-exon-sc0000038-1491911889:793985..795133 | Clytia hemisphaerica | exon |
TCONS_00003928-exon-sc0000038-1510915933:793985..795133 | TCONS_00003928-exon-sc0000038-1510915933:793985..795133 | Clytia hemisphaerica | exon |
TCONS_00003928-exon-sc0000038-1575043694:793985..795133 | TCONS_00003928-exon-sc0000038-1575043694:793985..795133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000038 | supercontig | sc0000038:793740..795133 + |
Blast
The following BLAST results are available for this feature:
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