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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003928 ID=TCONS_00003928|Name=TCONS_00003928|organism=Clytia hemisphaerica|type=transcript|length=1201bp
ATGAAGAATTTGGAAATCAAAGATGAGTCAATTCAATCCAGGGATCATAC
AGtggaacattggaacatatACGATCCTGTCTCCGTTTTCTATGGTCGTA
AGGAActtatcaaaaatattcactCAGCACTTGATTCAAATCAAAGAGTC
GTTTTGACTGGGTTGGGAGGTGTTGGAAAAACACAGACTGTTGCCAAATT
CACACAGTTATACAAAGATGAGTACCAAAAAGTCTTTTGGATAGCTGCTG
ACAATCTCAATAAAACAATGGACGAAATCATCCGCTATTTTGGATTTGGT
CAATATCTTCCAAAAGATCCTTCGACTGAAATGTTGGTCAAGTTATTGTT
ATCAAAAGTTTGCAAAGTTGAGGAAAAGACTTTGATTATATTAGATGATG
TTACAAACTTATcatctaaagattttaaaagtttactTCGTCATGACAAG
CACAAATTATCATTACTTATGACATCACAATTGACTGATTGGGAGGATCT
TGCAGTCACCAATATAAGAGTTCCTTGCTTTGAGGAATATGAATCTGTTG
GATTTTTGGAAGGTCAAATCCTTGATGCTTCTGCCGAAGATATTTCAACT
CTAGTTGGCCATCTACAATGTTACCCTTTAGCTTTACATCAAGCAATATG
TTATATACGTAAGTTGAAAATTACTGTCCCATCTTATATTGAGCAATTTG
AAGCTTGCCGCAAAAGTGTTTTAAGCATGAAAATAAAGTCATTTTCAGAC
TATGATAAAACATTGTTGACAGTTTGGGATATGGCATTTCACAAGATAAA
TGAGGAATCGAAAAATGCTATTTTAGTTTTAAGTATGATGGGTTACATGG
ATAATAAGagaatcaataaaaaaactttcacttaTTTGGATAATATTGAT
GAAATTGATGTAGATGAAATTGTTTATTTACTCGGTCAATATTCTCTGGT
TAATGAAAGAAATGGATTTTTGGAAATTCATGCCCTTGTTCAAAAAATGG
TAAGATATTGTGTTGAAGAACAGAATTTAGTTGAAGATGAATGTCCCAAA
AAACTTGTGATGGATACAATTGAAAAGATTTATAGCTTTAAAAAGGAAGA
TTTAAAAAACCTTGCAATGTATTATGATGATGAAGATTTATGGTATGCCC
ATGTTGTTTATTTAATGCAAAATCACTTTATCGACAACCATCAAACTGAT
T Run BLAST on NCBI transcript from alignment at sc0000038:793740..795133+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003928 ID=TCONS_00003928|Name=TCONS_00003928|organism=Clytia hemisphaerica|type=transcript|length=1394bp|location=Sequence derived from alignment at sc0000038:793740..795133+ (Clytia hemisphaerica)
ATGAAGAATTTGGAAATCAAAGATGAGTCAATTCAATCCAGGGATCATAC
AGGTTTTAATTTATACTATATCAAATTCTCTATGAAGAGTTTTGCCGGCA
TAATTGAGTtgcttatttttttcaattttgctattttccacTTTATCTAA
ACACATTATGATGTGAATTCACTACagatgatttttattttttttatgca
ATTCAACGACATCGGTATCAAACCAATTACTTTTATTTTCCATagtggaa
cattggaacatatACGATCCTGTCTCCGTTTTCTATGGTCGTAAGGAAct
tatcaaaaatattcactCAGCACTTGATTCAAATCAAAGAGTCGTTTTGA
CTGGGTTGGGAGGTGTTGGAAAAACACAGACTGTTGCCAAATTCACACAG
TTATACAAAGATGAGTACCAAAAAGTCTTTTGGATAGCTGCTGACAATCT
CAATAAAACAATGGACGAAATCATCCGCTATTTTGGATTTGGTCAATATC
TTCCAAAAGATCCTTCGACTGAAATGTTGGTCAAGTTATTGTTATCAAAA
GTTTGCAAAGTTGAGGAAAAGACTTTGATTATATTAGATGATGTTACAAA
CTTATcatctaaagattttaaaagtttactTCGTCATGACAAGCACAAAT
TATCATTACTTATGACATCACAATTGACTGATTGGGAGGATCTTGCAGTC
ACCAATATAAGAGTTCCTTGCTTTGAGGAATATGAATCTGTTGGATTTTT
GGAAGGTCAAATCCTTGATGCTTCTGCCGAAGATATTTCAACTCTAGTTG
GCCATCTACAATGTTACCCTTTAGCTTTACATCAAGCAATATGTTATATA
CGTAAGTTGAAAATTACTGTCCCATCTTATATTGAGCAATTTGAAGCTTG
CCGCAAAAGTGTTTTAAGCATGAAAATAAAGTCATTTTCAGACTATGATA
AAACATTGTTGACAGTTTGGGATATGGCATTTCACAAGATAAATGAGGAA
TCGAAAAATGCTATTTTAGTTTTAAGTATGATGGGTTACATGGATAATAA
GagaatcaataaaaaaactttcacttaTTTGGATAATATTGATGAAATTG
ATGTAGATGAAATTGTTTATTTACTCGGTCAATATTCTCTGGTTAATGAA
AGAAATGGATTTTTGGAAATTCATGCCCTTGTTCAAAAAATGGTAAGATA
TTGTGTTGAAGAACAGAATTTAGTTGAAGATGAATGTCCCAAAAAACTTG
TGATGGATACAATTGAAAAGATTTATAGCTTTAAAAAGGAAGATTTAAAA
AACCTTGCAATGTATTATGATGATGAAGATTTATGGTATGCCCATGTTGT
TTATTTAATGCAAAATCACTTTATCGACAACCATCAAACTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003928-exon-sc0000038-1491911889:793740..793791 | TCONS_00003928-exon-sc0000038-1491911889:793740..793791 | Clytia hemisphaerica | exon |
| TCONS_00003928-exon-sc0000038-1510915933:793740..793791 | TCONS_00003928-exon-sc0000038-1510915933:793740..793791 | Clytia hemisphaerica | exon |
| TCONS_00003928-exon-sc0000038-1575043694:793740..793791 | TCONS_00003928-exon-sc0000038-1575043694:793740..793791 | Clytia hemisphaerica | exon |
| TCONS_00003928-exon-sc0000038-1491911889:793985..795133 | TCONS_00003928-exon-sc0000038-1491911889:793985..795133 | Clytia hemisphaerica | exon |
| TCONS_00003928-exon-sc0000038-1510915933:793985..795133 | TCONS_00003928-exon-sc0000038-1510915933:793985..795133 | Clytia hemisphaerica | exon |
| TCONS_00003928-exon-sc0000038-1575043694:793985..795133 | TCONS_00003928-exon-sc0000038-1575043694:793985..795133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:793740..795133 + |
Blast
The following BLAST results are available for this feature:
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