TCONS_00003903 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003903
Unique NameTCONS_00003903
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4902

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003903 ID=TCONS_00003903|Name=TCONS_00003903|organism=Clytia hemisphaerica|type=transcript|length=4902bp
TTTGCTTTCAAATAGTAGAAACGGTGTACACTGATGAGACTCGTAAAAAT
GGGACATGGGTTTCCTGTTGTTACATAATAGCTCACGTAACCAAAGTTGT
TAACATTTCACAACCTGAGAAGGGGGGGGGTTCTGGCTTCGCTCGTGATT
CAACATTATTATTCCTCCAGAGAAGggtatcaaaattagaaaagggATGT
CAAAATTAGACCAACTAAAAATTAAAGGATGTCATTTTTATAGCCACCTA
TCTTGCAAGACAATGAACAGCTACTGGCTTCAGTAGAGTAGGGTTTTCAA
ATTCAGCCATCTTATTGGTGGGAATTTAAAAAGTCTCACATGCATTAACG
TACAATTTATATCATTTGATTACTTTTAgcataaatcaaaaaattagTAT
TAATCAACTTAAAAAATGCCTTTGTTTGGTAAAGCAAGTTTTAAAGCTTC
TAGAAAAGTTCCTAAACGGAAAGCAGATGCTGGCTCTACTGATCCCAGTC
AGCTGAGTGATAAAAGCGCTTTGGATCCAAACCTAGATTTTTCACAGACA
CCATTGAAACTCTCACTTGGtggtcaaaaaatgatttttcaaaatggtgt
aTGGATTGCTACAGATGAGCAAGGTAGCCAATCATCTATGAGAGACAATG
ACTTATCGCATGCAGctaaagagaaaatattaacacttgaagaagaaaat
aatatgTTGAAATACAAAATTGAATTACTTCTAGATATGCTTGCAGTATC
ACAATCAGATATTCAATGCATGGAACAAGAAATTAACCAAATGAAGAAAG
CTGTCGGGAATAAAGATTCTGGATATTCATAGTTCCTAGAGCTTCTATAA
GTTCCATCATTGTGATGTGAGCCAAGTATTTGGCGGTGATGATTTCAACA
CTTCAGCTTGTACATTCGTACATTGTATGATTCTGGCCAGCTCTTAGGAC
TCTTATCAGCTTTGAAGAGGATCATTCAAGCAAGAATCATTTGGCAGCTG
TTTCCTTCGATCTGAAGTATTTCACAAACAGACTACTTTATTCAAAGCTA
TTAACAGGAACATAATGATCACCAAAAACAGGAAAATCCTTGCAACTGCT
TGCAAAACAACCCATTCAACTTCATTGCAAAAGCTTGCAGAAATTCTTTG
CCAAGTGTAAATGAATGTATAATGAATGAAATAGATAGATGGTTTTTATT
TATGGTGATTGATTCATAAGGGGCTGtcaacaaataaaaattaatactgt
ttaaatgatggatattttgattttataaatttgCTTATTATATGTAATTT
ATTGTACAATGAGATTTTTGAAATACATATTATAATGTTTCTCACTGCCT
CTCTTATCCGAGACATACACATAAAATAATTTTGACGTAtacaatttttt
aataattacAGAATGACATATTCATcagtactctgtaccagagtgtaacC
TCTGCGataaagtatgatttataaatgaCAACACTTCTGTCGTCGTCTCC
CGTCCCTCACTCACACTCCATCGCAGTGGTCGgtttgaaaattctcaaat
cagaaaagacaCTTGAcaaatgacaacagaccctctacggcaatgaattt
tgaatagGTCTGTACAGACTAATTGATCAGAAAACTAGACCCTTCTTCAT
gataatatttatattttttctagAATGATAAAAAGTAATGAGAAAGTAAA
GTGAAAAATGGACCCGTTGCAGAAGTTGTTGAACAATAACAAACCAAATT
CATGGTATACTTGCAAGACACCTCTTATGAAGGATGTACCGATCAAACTC
GATGTGGAGGACCGCAAAAATCTGATgtcattgaaaatgaaagcatgTAA
AATAGAACAGAAAATCGAAGAAAGACGAAAGAGGAAGAGAGAAGAGATGA
TGCAAGCTTGTCTATTTGTTCAACAGAAGATTCAGAGCCGACcaaaaaag
aaccaacaaagtTTATCATCAGCTTCGTCCAACACAGTCACTCCAGAAAA
CACTCCCCATCCCCAAGAAAGGGCTACCCAGCTTCAAGGAAATGCTTCTT
ACCACCAAGAAAGGGCTACCAACAATCAAGTAAACACTCCCCACCTTCAA
GATAACATTTCCCGCCATTACCAAGAGCCTGtagaacaaaacaaaacacc
AGAATTGCATCCAAGCATCTCTGAAAACAATATTGTCCAACAAATGGATG
AGCTGATGGACCTCAAAGATGAACAAGACGAACTTGAATCGTGGTACGAA
ATCGAGAAAATCAAATTAGCTGCAAAATACGATCAAATGAGACTTGAAAA
CATACGTAGACAGAAATCCATCATAGAGAATAGTCATGATATGCTTGTAA
TGAGTGTAGAGAAAAATACACCTTTGAAGAGTTTTCAAAACCAAAGTCAT
CAACAACTCGACTCTCCTGTGTTATTCCAAGATTCAGAATCAAGCAGATA
TCATAGTGGAAGTATTACTCGTTCTTCACCTAACACCTCTGATTCGTCCC
TACCCAAATCTTATAGTAGTAATCACTCACAGTCTGAGCAACAACAGAAA
GTACATTTTACAATTACAAGCGAAAGTGATGAAAATCCTGTCATCACAAA
AAGTCATTCACCATCCGAATGTATCAAAGGTATTGAAAGTGCACAAAACC
AATATCCACCCCAATATGATATTCAAGACTCTTTGACCCACTCTCAACAA
TCACCTAACCAACAAAATTCAGAACCAGAAATGATTTACCAAGATCCACC
AAGTAATGTGCTTCAGAATGGTCCAAGTCCTACCAGTGCAACCAATAGTT
ATTTTTCATCTCAAAATAATGCTTTGCAAAATCAAAGTCTCACCGATAAT
ATGAATAATAGAAACGCAAACAGCTCTCCTAACAGCAATGCTTCACAGAA
TCACCAAGAACAATCTAAACCAAATTCTGAGTTGAACAacccagaaaaat
tttcaagagaTTCTATCGCAAACATGGTTAGTTTTGGAAGCGAACTCTTA
CTCAGACATTATCAATCAGTTGATGCCAAACTGCGAAGAAAAAGTAGAGC
CACGAAATTCTTTACAACACCCGAATCTAATAAGAAGAAACAAGCTACAA
AATTAATAACATATTCAACAGATTTATCGCCGTACCCAACAACAAACATT
GAAGGTGATTTCAATACTCCAGGTAATGTTTTCACCAGCCAACTAACCAC
TCCTTGTACTGAGCAAAGAGAATTTCAACAGCCAACAGAATCAACCAGGA
AACTGATAAACAATAACCAAGAAAACACACCATATCCAGGATACGTCAAC
AAATTCACTGAAGATTTGTCACCAGCTGTTCAATCACCGTGTGTTGTCAA
CCAGAACCATATTGATACTCCTTTCCCGAAACCACAGAACCAACACCCTT
ACACTACAATAGATCAACGCCAATTCCAACAAAGAAACCATAACCTTTCC
CATAACTCCAATCAAAACGCTGGTATACCTTTATCGAAATCGACTCTCCA
CATCCCATCCAAGTTAACCAATAAATCCATATCTACCCCAGCTCTGAATC
AAGATTCTCCACGTGTTACCAACAAAACAATTATGACAGTTTCCACTCCG
AACATACACGACAGTCAAGACTCAATAGAGAAAACATCGACGCCGCATGA
GGCTCAGCGATTCAGCAGCCCTAGACAAAATTTCCATCATCTTTCATTAA
TTTATGGGGATGAAATTCCAAGAATGGATATCTGTAATGAGCAGGACCAA
AATCGGTCTTTCCACCAACAAAGATGTTCGCCACTGTTCGCTTTATACAA
AGGTTTCATGGTACGTCGCTTGTTGAAAACAAGAAAAGTCAATGAAATCA
TCAAGACAATTAAGGATACACGTTCATTTTTGAGTGACATCGATAAAGAA
AATCGTGGTAAATTCAATTTAGCCGATCGACAGCTTCGTACTCGACTGCT
TGACGAGGTTTCAACTAAACAAGGGAAGCTGAATGACATTCTCACAATGT
CACCCTCTGATCAATGGACCATTATCAAAAAGGATCGAAAACAAAAGCAA
GATAAGATTCAACAACCTCGAAATTCACGACCTTCTATGATGGTTGACAA
AAGACCAAAGACAGCTCCAGCAACCAAGAAATTATCTGCAGCCTCTCTCA
AAACTATGAAAAGACGTCAAGAGAATTTACACAATATCAACAACAACAGA
CCAAAGACAGCACCACCACCAAAAACGCCTGTTAAACAAGGAGTCAGCAA
GAAGACCGCATCTCAAAGACCAAAATCTACTGGACGAGGTGCATTGAAAC
CGATCCAGAGTCCACATTCTCCGACCATGAAAAAACGATAATTAATTTTG
GAGCATGCGTAATTTAAAGTTATTATTATGTTTTACTGTTATagtattct
ttttgttttttttcttttgtgggGGAATTCATCTCTTCTGTCAGTCCATC
TATTATTTTGAATCCCAAATActttatctttagtttttccTCTCTTCCAA
TTCTCTTCTTCGAATtgtttatcggcattgggccgataagctccagaccc
cctccccccttcctcttatcggccaaaatttttgaaaccaacttttacat
cttcgaaaacacaatttttttccagCCATCGCGTTGATCTCGCTTTCCAC
CCGTCTTCGTTGAGTTTTTGACTATTTGCACCAGcattgagtttgttcat
acccgcattgatattgttaatcaaaacgaaAATTAAAAAGACGCGATGAA
GTCGCAACATTTCGAAGGAAATGGCAGCAcgctggccaatgaaaaaagag
tttttttattaaagctaattcaaaactgtacttttaaagttgCGAATTTG
TGCGCgaaggtgaaagcaagtgaaattgtatgctttcagtggagtttgtg
ga
Run BLAST on NCBI

transcript from alignment at sc0000038:519770..534642+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003903 ID=TCONS_00003903|Name=TCONS_00003903|organism=Clytia hemisphaerica|type=transcript|length=14873bp|location=Sequence derived from alignment at sc0000038:519770..534642+ (Clytia hemisphaerica)
TTTGCTTTCAAATAGTAGAAACGGTGTACACTGATGAGACTCGTAAAAAT
GGGACATGGGTTTCCTGTTGTTACATAATAGCTCACGTAACCAAAGTTGT
TAACATTTCACAACCTGAGAAGGGGGGGGGTTCTGGCTTCGCTCGTGATT
CAACATTATTATTCCTCCAGAGAAGggtatcaaaattagaaaagggATGT
CAAAATTAGACCAACTAAAAATTAAAGGATGTCATTTTTATAGCCACCTA
TCTTGCAAGACAATGAACAGCTACTGGCTTCAGTAGAGTAGGGTTTTCAA
ATTCAGCCATCTTATTGGTGGGAATTTAAAAAGTCTCACATGCATTAACG
TACAATTTATATCATTTGATTACTTTTAgcataaatcaaaaaattagTAT
TAATCAACTTAAAAAATGCCTTTGTTTGGTAAAGCAAGTTTTAAAGCTTC
TAGAAAAGTTCCTAAACGGAAAGCAGATGCTGGCTCTACTGATCCCAGTC
AGCTGAGTGATAAAAGCGCTTTGGATCCAAACCTAGATTTTTCACAGACA
CCATTGAAACTCTCACTTGGtggtcaaaaaatgatttttcaaaatggtgt
aTGGATTGCTACAGATGGtataactttttgttaaaaCTTGTATTTTGAAG
CTTTCAAATGTAAGACCAGACCCGATTggaatttctaaaaatcttaTTCT
AAATTATGATTAATAATACACAATGACACAAATAAACTACAGTTGAAACT
TGCCTGACTATTTTAATTATAAACCATCAATTGTATTATCAAtgcttttt
ttcctcttttattTTAAACTGCAGAGCAAGGTAGCCAATCATCTATGAGA
GACAATGACTTATCGCATGCAGctaaagagaaaatattaacacttgaaga
agaaaataatatgTTGAAATACAAAATTGAATTACTTCTAGATATGGTTT
GTAATGAAAAATCAACTACCTATTGCTGTATAGTTTTTAAAGTACTTCAA
ATTCATCAATCAATCATTTAAGATAAATCTGATAAGATCAATCTGATtta
taatattatatttttggATTTACATATTTTAAAAAGCTTGAAACCTGTTG
TGAGTTATGTTTTCATTCTTTAAAATAGGTCATTTccttaaagtttaaag
ttttttatataaaaacactGTCACAATGTTTTAAATCTATATTACACATT
TCTTTATAGCTTGCAGTATCACAATCAGATATTCAATGCATGGAACAAGA
AATTAACCAAATGAAGAAAGCTGTCGGGAATAAAGATTCTGGATATTCAT
AGTTCCTAGAGCTTCTATAAGTTCCATCATTGTGATGTGAGCCAAGTATT
TGGCGGTGATGATTTCAACACTTCAGCTTGTACATTCGTACATTGTATGA
TTCTGGCCAGCTCTTAGGACTCTTATCAGCTTTGAAGAGGATCATTCAAG
CAAGAATCATTTGGCAGCTGTTTCCTTCGATCTGAAGTATTTCACAAACA
GACTACTTTATTCAAAGCTATTAACAGGAACATAATGATCACCAAAAACA
GGAAAATCCTTGCAACTGCTTGCAAAACAACCCATTCAACTTCATTGCAA
AAGCTTGCAGAAATTCTTTGCCAAGTGTAAATGAATGTATAATGAATGAA
ATAGATAGATGGTTTTTATTTATGGTGATTGATTCATAAGGGGCTGtcaa
caaataaaaattaatactgtttaaatgatggatattttgattttataaat
ttgCTTATTATATGTAATTTATTGTACAATGAGATTTTTGAAATACATAT
TATAATGTTTCTCACTGCCTCTCTTATCCGAGACATACACATAAAATAAT
TTTGACGTAtacaattttttaataattacAGAATGACATATTCATcagta
ctctgtaccagagtgtaacCTCTGCGataaagtatgatttataaatgaCA
ACACTTCTGTCGTCGTCTCCCGTCCCTCACTCACACTCCATCGCAGTGGT
CGgtttgaaaattctcaaatcagaaaagacaCTTGAcaaatgacaacaga
ccctctacggcaatgaattttgaatagGTCTGTACAGACTAATTGATCAG
AAAACTAGACCCTTCTTCATgataatatttatattttttctagAATGATA
AAAAGTAATGAGAAAGTAAAGTGAAAAATGGACCCGTTGCAGAAGTTGTT
GAACAATAACAAACCAAATTCATGGTATACTTGCAAGACACCTCTTATGA
AGGATGTACCGGTATGTATtatcaacttcagttgagctaaaACTGTAACT
GTGTGTGTGTAGTCCCTTGACAGCCTGGAGACCTACAAAATGGTTCGCCT
TAAAATATagtttgccttaaaaaatgagttgccttaaaaaatggttCGCC
TTAAGAAATGGTTCGCCTTGAAAAATAGTTTGCCTTAAAAAACGGTTCAC
CTTAAAAATGGGTTGCCTTTTAAGGAATGGTTGCCTTATTAAAGAATGGT
TGAATTAAATACACCCCTTTTTAACTCATCCATGATTGTTCtagtttaaa
attttgattttttgagattGGGGATGAGTTTTTCACTTCTTCTACAATCG
GGCTTTGTGTTTTTTTGTgggttgattttcaaatttcttattacTACTTC
AGATCAAACTCGATGTGGAGGACCGCAAAAATCTGATgtcattgaaaatg
aaagcatgTAAAATAGAACAGAAAATCGAAGAAAGACGAAAGAGGAAGAG
AGAAGAGATGATGCAAGCTTGTCTATTTGTTCAACAGAAGATTCAGGTTA
TTCGAGTTAAATTTGACCATTCGTTTAATGACCCAGGTTGTAGAACAATT
TGCCTAactcatcaaaatattttgagcccTATTGGGccattcttggactt
ttggactcagagttaaaactctacccttccaacctagaatttagagcgct
tccaaatcgtttgtggttgtaagattttgtgggaatttcccttttttctc
aaatattatgactttgatttgaTTGTACCACATACTAGTATTGCTAATTA
GGCAAATTCCTGGAAGACAGAAAATATTTCAccactgcaaaaaaaatatt
tgttgtttTCACACTTATTTTGCTTTCAGAGCCGACTTAAGGTTGATTTC
AATGCTTCTTTCAGAGCCGACcaaaaaagaaccaacaaagtTTATCATCA
GCTTCGTCCAACACAGTCACTCCAGAAAACACTCCCCATCCCCAAGAAAG
GGCTACCCAGCTTCAAGGAAATGCTTCTTACCACCAAGAAAGGGCTACCA
ACAATCAAGTAAACACTCCCCACCTTCAAGATAACATTTCCCGCCATTAC
CAAGAGCCTGtagaacaaaacaaaacaccAGAATTGCATCCAAGCATCTC
TGAAAACAATATTGTCCAACAAATGGATGAGCTGATGGACCTCAAAGATG
AACAAGACGAACTTGAATCGTGGTACGAAATCGAGAAAATCAAATTAGCT
GCAAAATACGATCAAATGAGACTTGAAAACATACGTAGACAGAAATCCAT
CATAGAGAATAGTCATGATATGCTTGTAATGAGTGTAGAGAAAAATACAC
CTTTGAAGAGTTTTCAAAACCAAAGTCATCAACAACTCGACTCTCCTGTG
TTATTCCAAGATTCAGAATCAAGCAGATATCATAGTGGAAGTATTACTCG
TTCTTCACCTAACACCTCTGATTCGTCCCTACCCAAATCTTATAGTAGTA
ATCACTCACAGTCTGAGCAACAACAGAAAGTACATTTTACAATTACAAGC
GAAAGTGATGAAAATCCTGTCATCACAAAAAGTCATTCACCATCCGAATG
TATCAAAGGTATTGAAAGTGCACAAAACCAATATCCACCCCAATATGATA
TTCAAGACTCTTTGACCCACTCTCAACAATCACCTAACCAACAAAATTCA
GAACCAGAAATGATTTACCAAGATCCACCAAGTAATGTGCTTCAGAATGG
TCCAAGTCCTACCAGTGCAACCAATAGTTATTTTTCATCTCAAAATAATG
CTTTGCAAAATCAAAGTCTCACCGATAATATGAATAATAGAAACGCAAAC
AGCTCTCCTAACAGCAATGCTTCACAGAATCACCAAGAACAATCTAAACC
AAATTCTGAGTTGAACAacccagaaaaattttcaagagaTTCTATCGCAA
ACATGGTTAGTTTTGGAAGCGAACTCTTACTCAGACATTATCAATCAGTT
GATGCCAAACTGCGAAGAAAAAGTAGAGCCACGAAATTCTTTACAACACC
CGAATCTAATAAGAAGAAACAAGCTACAAAATTAATAACATATTCAACAG
ATTTATCGCCGTACCCAACAACAAACATTGAAGGTGATTTCAATACTCCA
GGTAATGTTTTCACCAGCCAACTAACCACTCCTTGTACTGAGCAAAGAGA
ATTTCAACAGCCAACAGAATCAACCAGGAAACTGATAAACAATAACCAAG
AAAACACACCATATCCAGGATACGTCAACAAATTCACTGAAGATTTGTCA
CCAGCTGTTCAATCACCGTGTGTTGTCAACCAGAACCATATTGATACTCC
TTTCCCGAAACCACAGAACCAACACCCTTACACTACAATAGATCAACGCC
AATTCCAACAAAGAAACCATAACCTTTCCCATAACTCCAATCAAAACGCT
GGTATACCTTTATCGAAATCGACTCTCCACATCCCATCCAAGTTAACCAA
TAAATCCATATCTACCCCAGCTCTGAATCAAGATTCTCCACGTGTTACCA
ACAAAACAATTATGACAGTTTCCACTCCGAACATACACGACAGTCAAGAC
TCAATAGAGAAAACATCGACGCCGCATGAGGCTCAGCGATTCAGCAGCCC
TAGACAAAATTTCCATCATCTTTCATTAATTTATGGGGATGAAATTCCAA
GAATGGATATCTGTAATGAGGTATAATCAAACTTTTCCTAAAACCTTAAC
TTTCGCCAATGCGATCTTCAAAAAAACTCGGATAAGTTCTCTAAGCTGTA
TTGATCCCTTCTACTCAATCTATcgcttccataatggtggaaattacgta
acttgaCGAAACCTAACAACCCTGAATTAACATTTAGCTGAAAATTAGAC
ATTATTTTAACTGTACAGATATCTCAAAACCTTTTGTTTTCAGCAGGACC
AAAATCGGTCTTTCCACCAACAAAGATGTTCGCCACTGTTCGCTTTATAC
AAAGGTTTCATGGTACGTCGCTTGTTGAAAACAAGAAAAGTCAATGAAAT
CATCAAGACAATTAAGGTAAGAATTAGCCATTGGGTTTGAAGCCCGAAGG
GCTGGAGTAGAACCTCTAACCTTtcgcaggcaagaaaaagtgaagccact
tatttcccatccagaacacatgtagaacgcgccgcaatcatgacgacgaa
tTGTATCTAGTGGCTCCTTCGTTTTTgaagactacattttttgaaatcta
gcgataactttcaatccggcgtttgtgtaaaaaccaagCACGGGCGTTcc
ggatgggaaataagtggcttcatttcccatcctggagtctcgagtctagc
gcTTAGGGCTTGGAAATCAATGGAATTAGCAATGTTTTTGGCCCCTTACT
TTGTTTTTACCAGGCACAGTTTGGAGGTTCGCCCGGGCTCGCCTTTTTGT
TATTGAAATATTGCTATTACTACAAGGCGTGTTTTAACGGCCATACAGCG
ttttattgacattttagaaGGGATGTTGCATTCCCGGGCTTTTGTTTCGG
TCCCCTGTTAGGTAAGATTGGTCTTTGAGTATCTTTGGTGCAAGattttg
gatttgtttagacAACACTTTTACAACGATATGTCCATGACATAATCTTT
AGTACATTAATACCCGGAATGGCCGGGGGTACTGCGGCATGATATCGACC
CTggttttcgcgaaaatttgtctTACTACCACCACTCTCTTTTTAATATA
ATACCTGGTANATGATATTCAAGACTCTTTGACCCACTCTCAACAATCAC
CTAACCAACAAAATTCAGAACCAGAAATGATTTACCAAGATCCACCAAGT
AATGTGCTTCAGAATGGTCAAAGTCCTACCAGTGCAACCAATAGTTATTT
TTCATCTCAAAATAATGCTTTGCAAAATCAAAGTCTCACCGATAATATAA
ATAATAGAAACGCAAACAGCTCTCCTAACAGCAATGCTTCACAGAATCAC
CAAGAACAATCTAAACCAAATTCTGAGTTGAACAacccagaaaaattttc
aagagaTTCTATCGCAAACATGGTTAGTTTTGGAAGCGAACTCTTACTCA
GACATTATCAATCAGTTGATGCCAAACTGCGAAGAAAAAGTAGAGCCACG
AAATTCTTTACAACACCCGAATCTAATAAGAAGAAACAAGCTACAAAATT
AATAACATATTCAACAGATTTATCGCCGTACCCAACAACAAACATTGAAG
GTGATTTCAATACTCCAGGTAATGTTTTCACCAGCCAACTAACCACTCCT
TGTACTGAGCAAAGAGAATTTCAACAGCCAACAGAATCAACCAGGAAACT
GATAAACAATAACCAAGAAAACACACCATATCCAGGATACGTCAACAAAT
TCACTGAAGATTTGTCACCAGCTGTTCAATCACCGTGTGTTGTCAACCAG
AACCATATTGATACTCCTTTCCCGAAACCACAGAACCAACACCCTTACAC
TACAATAGATCAACGCCAATTCCAACAAAGAAACCATAACCTTTCCCATA
ACTCCAATCAAAACGCTGGTATACCTTTATCGAAATCGACTCTCCACATC
CCATCCAAGTTAACCAATAAATCCATATCTACCCCAGCTCTGAATCAAGA
TTCTCCACGTGTTACCAACAAAACAATTATGACAGTTTCCACTCCGAACA
TACACGACAGTCAAGACTCAATAGAGAAAACATCGACGCCGCATGAGGCT
CAGCGATTCAGCAGCCCTAGACAAAATTTCCATCATCTTTCATTAATTTA
TGGGGATGAAATTCCAAGAATGGATATCTGTAATGAGGTATAATCAAACT
TTTCCTAAAACCTTAACTTTCGCCAATGCGATCTTCAAAAAAACTCGGAT
AAGTTCTCTAAGCTGTATTGATCCCTTCTACTCAATCTATcgcttccata
atggtggaaattacgtaacttgaCGAAACCTAACAACCCTGAATTAACAT
TTAGCTGAAAATTAGACATTATTTTAACTGTACAGATATCTCAAAACCTT
TTGTTTTCAGCAGGACCAAAATCGGTCTTTCCACCAACAAAGATGTTCGC
CACTGTTCGCTTTATACAAAGGTTTCATGGTACGTCGCTTGTTGAAAACA
AGAAAAGTCAATGAAATCATCAAGACAATTAAGGTAAGAATTAGCCATTG
GGTTTGAAGCCCGAAGGGCTGGAGTAGAACCTCTAACCTTtcgcaggcaa
gaaaaagtgaagccacttatttcccatccagaacacatgtagaacgcgcc
gcaatcatgacgacgaatTGTATCTAGTGGCTCCTTCGTTTTTgaagact
acattttttgaaatctagcgataactttcaatccggcgtttgtgtaaaaa
ccaagCACGGGCGTTccggatgggaaataagtggcttcatttcccatcct
ggagtctcgagtctagcgcttaggcttggaagtcaatggaaTTAGCAATG
TTTTTGGCCCTTACTTTGTTTTTACCAGGCACAGTTTGGAGGTTCGCCCG
GGCTTACCTTTTTGTTATTGAAATATTGCTATTACTACAAGACGTGTTTT
AACGGCCATACAGCATTTTATTGACATTTTGGAAGGGCTGTTGCATTCCC
GGGCTTTTGTTTCGGTCCCCTGTTAGGTAAGATTGGTCTTTGAGTATCTT
TGGTGCAAGattttggatttgtttagacACCACTTTTACAACGATATGTC
CATGACATAATCTTTAGTACATTAATACCCGGAATGGCCGGGGGTACTGC
GGCATGATATCGACCCTGGTTTTGGCGAAAATTTGTCTTACTACCACCAC
TCTCTTTTTAATATAATACCTGGTACTAACGTTTTTGAGGAAAAAGGGGA
CGTCCAACCAATAGCGTTGTGGCAGGGGACCGGGTGACACGCCCCCCCac
cccccagcggagcttttttgaaggagTGCCGAAGAGCAAGGtgcgccaaa
agagattttttaaacgccccaatcttaaaaatcatattttatgcgcctta
aattgtGCCCCAGGAccataattttaaaatacttgcaatttttttcgctc
gcaataaacttctttgcaatctagctaatttacaagtttgtgtacaatat
agcatcattaaatgaaaatttaactttctttttcagcattttgagcctca
aattgttatTCTGTTCTTAATTGTAGTGTGAAATTAAGGTATTTCAAgct
ttttacccaatttttactactatgaacgccactttggaaaatttgggggg
gcgccatttaaaaaaaattgactttggctcCTCCAggaaaattttcccac
aacgccactgcgtCCAACCCTATTTAGAAACCggttataaaaaaaaatcg
gtTCACCACCTTAGACACAACAGCCATGAATTGCCTGGCATTTTCGGGTG
TTATTTAATAGAATAGTTCATATCTTAAATTTCACCTACATCCCTTTTTA
ATCGGTTTACTTCACCTTGCTTAATACTTTAATTAATAGCACtaattttc
ttttgtaaaaacaattttataataacNCTACTTTAAATAATAGCACTAAT
tttcttttgtaagaacaattttataatagcattgaggctcaaaatcgcca
aaaaataagagcaattttaagaacaatgctgaccCTGGAATTACTAAATT
CCAAGCAATTTAGGgttcaaagtagtaaaaatttggtaaaaagcCTTAAT
TTCACCCTATAATTAAGAACAGGATAACAATTTGAGTCTCAAAATgctga
aaaagaaagaacaactgAACTTAATCAAAAATCTActtgtttcttataaa
taataGAATGTACTCTTGATATTTCTTTGTGTAGGATACACGTTCATTTT
TGAGTGACATCGATAAAGAAAATCGTGGTAAATTCAATTTAGCCGATCGA
CAGCTTCGTACTCGACTGCTTGACGAGGTTTGTTACTCTtataattcaat
tttctttgttatgatataaaaaagaggcgcgcctctatgctgacaaagca
gagtaaacaaaagaatttctctaAATGTGAGATCGCGCAGCGTCGAAGGT
GGAGAAAATTGCTCTTTCTTTTGTTAGAAAAATGCTGTTCAAGCGTATGG
TCGGAGATGATGTTAAATGATGTCTTCTAATCCAACATTATTTTGATTTG
CTATAATTTTATCTCGGATGTTTTATTGTCCAGTTTAGTTCATCATACCA
TAAAAAGATGGAAGAGATAACAACTTCTTCAAATCGACGTTTTCTGAGAA
ATTAGTAAAACAGAttgataatttcaaactttaatttttctattcttCCT
CCAATTATTGCCCTTgatgttggaaaaaaatgtttattttactCAAAACC
TTTTAGCCCTGTTAGACTGTTAGCCCTAGCCTAGTTAAAACTAAGCCCAA
TTCACAAGGCTAGAACACACGGCTAGAACACACGGCTAATACCAATATAG
CGTTTTCAGTGCTTTAAAGATTtcttatatttacggattttaactTTGtc
ccatcagatttatcctagtgactgaatcaacCTAGCTTAGATATTAACCA
TGCGTACGTTCTCAAACATAAAACCATCCAAACTCCTAACTTCCTAAACT
GATGGTTGCATCAAATACACGTAACCAGTGCTGTTGGTCAAGAAAAAGTG
TACGGTTTCTagtaaataaacaaacttcttctattgtttaagtgacgttt
tgggtggaaaatttcaaaagttctcagactctccagtggtgcatatcatg
aatattgtaGTTGAACACCATTTAAAGACTAAAGACTCTCGTATATAATT
TTAGGTTTCAACTAAACAAGGGAAGCTGAATGACATTCTCACAATGTCAC
CCTCTGATCAATGGACCATTATCAAAAAGGATCGAAAACAAAAGCAAGAT
AAGATTCAACAACCTCGAAATTCACGACCTTCTATGATGGTATGTTTGTC
TTTGTTCGAATGTTCATATCTTTCATCTCTTTGTGTACACTTGTCTGTGT
ATTGCtgtattgaataacaaattttgAGGGAGCGACGGTCGAGTGATCGA
TGACAGCGCCTGAAACCAGTGGTTCCCGACTTGATCACAAACTGCTTCCA
ACTCACAAGGCTCGAgataacgatttcaagtgggtctGACAACATTTTTC
GATctggttgctttagcttgagaATTATGATTTTTCGGTCGACAATGAGC
AATTGTTTTAAGACCTGTGATAAGTTTTGCACTTATCATCCTTCCCATCT
TATCATTCGCGTCCTAAAACTTCAATCATCTTATTTTCAGGTTGACAAAA
GACCAAAGACAGCTCCAGCAACCAAGAAATTATCTGCAGCCTCTCTCAAA
ACTATGAAAAGACGTCAAGAGAATTTGTATCTTTTTCTATAAGCTAATCC
TTTAAGTGTCAATGTCGggtgggctatataggaggacGAAGCCCTTCAGT
AATGCCCTGTTTGAGtaagaaatcgtcatttttggtctaactcgtaggaa
ttggattgagcttcatggtcaagcaaaaacaaaaattaaaagtgaGTTTT
TTCCAGCGatattttaagccaaaaagtaaaaaaatgcaaaaatgtgacaa
aaatccacttttttgagattttgaccgtttttcgACCATCATTCTTGATC
AatgagtgatccaagaacctccaaatttcgCCCTGCATTACTCGATTCTG
TCTTCCAGTGAAGTAGTTtaaagttttaccactgggcgcCTTTCCGTCAT
TCAGGCAGGtgcccaaaagaaagaggaaaCTCTAAGCTATCCAGCGAGCT
atgaacgagcttctaactccttctagaacCAGAGATATCGCagcttttaa
agtttgaactagtgattttctttaaaaacttagaaaaaaagggCCGTGAA
ACTTACAGGGTCAAGCAAAGTATTCTACTATTTTTTTCAGGGTCATTAAC
CATATTTTTCTTGGCGAGGGGCTTTTAAATAGGGGTTTCCTCGAAAAAAG
TTAGTTCTTGCTACTAAAAAGGGAGTGAGGGCACCTAAGacaaattttcc
taaaaaacagTACTCCCTTTCCACCtgtaattgaaatgaatttccaAAGG
CATTCCAAAAGTTATCATAATCTGTCATTTATATAGGGCGTTCACACTCA
AAAGATGCAACGGTCCAGAATGTGACGGAACGCGACGTAGCAtacttaga
ccatgttcacactaTACTCGATAGCTTTTCGAAAAGATTCGATAGCCCAT
CCGATATAATGTGAACACTTCGGCATGAAACGCTACAAAGAACTCTCTTT
GTTTACTGTGTTCGTTCACATTTGATGTAACGATAAAAAAGAGTAGTATT
AATATCTCAAAAAATTATTATCGTCTCGAAAATAATATCGGATAGGGTCA
CTCAAAAGATGCACCGGTCCAGAATGCGACGGAACGCAACGTAGCACACT
TAGGACATCGTATCGTCTCAACACCTATCCGCTAGAAAAATCGGTTCGAT
AGATTTTCTATCGTGTCGAAAATCATATTAGATAGGGTGTCCACGAACCA
GTTAGTGGATTTCAGCAGCCTACTCTCGAATACCTATTAGCCGGGGTATT
GGAATAagcggtgggggggggggggggaaaatctcaaaacttaataagtg
gggcagggggtggaataaaaatgtcctgggtggaaaactttaaggaggct
aatacagcagaattaggacaaaagagggaactttcaaaaacattttccca
aaaattaataagcggggggaaggttggaataagaatgtcctgggtggaaa
attttcgaaaaattaattaccgGGGGACGgatattaggtacccgagagta
ggttgTATAAAGATGTTCAGAAAATGTAATGAAAGGGAGGGTTGAGAATT
TTTGTTCTTCACACCTTACTTATCTGGTAAAACATATTTTGTTAAAGGGT
GATGAAAAATCGCTAGGCAATACAAATTTTATACTGACATTCTTTTTGAA
TGGAGTCTCTTCTGAAGCTATAAATATCAAGAGTAATCGAGTCAAATAAA
TATCAAGTAATCGAGTCAAAAATATCACTTAAACCATCGTTTCTTCCTTG
ACTACAACTTTTCTCGTTACTTAAAAGACACAATATCAACAACAACAGAC
CAAAGACAGCACCACCACCAAAAACGCCTGTTAAACAAGGAGTCAGCAAG
AAGACCGCATCTCAAAGACCAAAATCTACTGGACGGTATGTTTCTAGATA
GAGAAATTTACAAGGCTGAAAATGCTTGAAGGATGCTTATAATTCGAAGC
AAAATGTTaggaaaattctgaaaatcagtaaaatctcAACCAAACACGGT
ATTTCGGAACCGTTTGGTCTCGAGACGAAGTGAAACCATAACGTCTGAAC
ATAGTCATAACCTTTGCTATGATCTTCCGCACGATATTCCTCATCATTCC
TGATTATaactctttttggacctaccccggtggaggtcctataaattaac
ctttgtccgttcgtctgttcgttcgttcgttcgtttgttattagctttcc
tcatgattggNNcgcataactataaaccctcgaatgtgacggagcccgat
tttcaaaaaaaaagttttttgggcaaatttgggccaaaaaacggctaaaa
aacgggttttttggactttgtgaaaaattaggtcattaattttttctgtt
tttttgcatgaaagtagggtaccatcgtaggtaaaagatggcttaagcga
atttttgcaaaaaaattttgttggctcaaaaaacgcatgtttatctataa
gaatcactattcataagcatacatcaatgttcttagtcaaattactcaat
ttttttatgagattttgctcaggagggcttgcttttaaagaatatgtgtt
tcgacatgaaattttggttgcttggcgtgtttttataaaataactggcca
aattcgatatttttttacaagcacattatcaattacttaggtattagctt
ttctcgagattggctctttcattctttacgatTTTTTGAACAAAGATGCA
TAACTATAAACCCTCGAATGTGACGGAGtccgattttcaaaaaagatttt
gggcaaatttgggccaaaaaacggctaaaaaatgggttttttggactttg
tgaaaaattggatcattaatttttactgattttttgcaggaaagtaaagg
tactatcataggtaaaatacggttcaagcagatttttgcaaaaaaattgt
agttggctcaaaaaacgcatgtttatctataagaatcactattaataagc
atacatcaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtattagctttt
ctcgagattggctcttttattctttatgattttttgcacaaagatgcata
gctataaaccctcgaatgtgacggagctcgattcttgggaaaaaaaattt
ggggcaaatttcagctaaaaagagatgtttttttgctctcgaagccttga
atatgaaagaatatttcaagagcatgaaattttggtttctaaacgtgttt
ttttataagaaacaaacgactaattttaatagatcgtcactatttgtgtt
ttgattgattgtttaatggtcacgcttatgtagatatcaattatatatgt
gttaaatgcataaccaggtaggtccataaaagtatcacttgtttttttcg
GTTTTAGAGGTGCATTGAAACCGATCCAGAGTCCACATTCTCCGACCATG
AAAAAACGATAATTAATTTTGGAGCATGCGTAATTTAAAGTTATTATTAT
GTTTTACTGTTATagtattctttttgttttttttcttttgtgggGGAATT
CATCTCTTCTGTCAGTCCATCTATTATTTTGAATCCCAAATActttatct
ttagtttttccTCTCTTCCAATTCTCTTCTTCGAATtgtttatcggcatt
gggccgataagctccagaccccctccccccttcctcttatcggccaaaat
ttttgaaaccaacttttacatcttcgaaaacacaatttttttccagCCAT
CGCGTTGATCTCGCTTTCCACCCGTCTTCGTTGAGTTTTTGACTATTTGC
ACCAGcattgagtttgttcatacccgcattgatattgttaatcaaaacga
aAATTAAAAAGACGCGATGAAGTCGCAACATTTCGAAGGAAATGGCAGCA
cgctggccaatgaaaaaagagtttttttattaaagctaattcaaaactgt
acttttaaagttgCGAATTTGTGCGCgaaggtgaaagcaagtgaaattgt
atgctttcagtggagtttgtgga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002187XLOC_002187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003903-exon-sc0000038-1491911889:519770..520386TCONS_00003903-exon-sc0000038-1491911889:519770..520386Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:519770..520386TCONS_00003903-exon-sc0000038-1510915933:519770..520386Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:519770..520386TCONS_00003903-exon-sc0000038-1575043694:519770..520386Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:520594..520715TCONS_00003903-exon-sc0000038-1491911889:520594..520715Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:520594..520715TCONS_00003903-exon-sc0000038-1510915933:520594..520715Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:520594..520715TCONS_00003903-exon-sc0000038-1575043694:520594..520715Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:520979..522030TCONS_00003903-exon-sc0000038-1491911889:520979..522030Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:520979..522030TCONS_00003903-exon-sc0000038-1510915933:520979..522030Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:520979..522030TCONS_00003903-exon-sc0000038-1575043694:520979..522030Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:522422..522565TCONS_00003903-exon-sc0000038-1491911889:522422..522565Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:522422..522565TCONS_00003903-exon-sc0000038-1510915933:522422..522565Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:522422..522565TCONS_00003903-exon-sc0000038-1575043694:522422..522565Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:522934..524739TCONS_00003903-exon-sc0000038-1491911889:522934..524739Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:522934..524739TCONS_00003903-exon-sc0000038-1510915933:522934..524739Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:522934..524739TCONS_00003903-exon-sc0000038-1575043694:522934..524739Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:524963..525085TCONS_00003903-exon-sc0000038-1491911889:524963..525085Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:524963..525085TCONS_00003903-exon-sc0000038-1510915933:524963..525085Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:524963..525085TCONS_00003903-exon-sc0000038-1575043694:524963..525085Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:528904..528996TCONS_00003903-exon-sc0000038-1491911889:528904..528996Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:528904..528996TCONS_00003903-exon-sc0000038-1510915933:528904..528996Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:528904..528996TCONS_00003903-exon-sc0000038-1575043694:528904..528996Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:529874..530008TCONS_00003903-exon-sc0000038-1491911889:529874..530008Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:529874..530008TCONS_00003903-exon-sc0000038-1510915933:529874..530008Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:529874..530008TCONS_00003903-exon-sc0000038-1575043694:529874..530008Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:530360..530445TCONS_00003903-exon-sc0000038-1491911889:530360..530445Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:530360..530445TCONS_00003903-exon-sc0000038-1510915933:530360..530445Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:530360..530445TCONS_00003903-exon-sc0000038-1575043694:530360..530445Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:532197..532304TCONS_00003903-exon-sc0000038-1491911889:532197..532304Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:532197..532304TCONS_00003903-exon-sc0000038-1510915933:532197..532304Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:532197..532304TCONS_00003903-exon-sc0000038-1575043694:532197..532304Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1491911889:534027..534642TCONS_00003903-exon-sc0000038-1491911889:534027..534642Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1510915933:534027..534642TCONS_00003903-exon-sc0000038-1510915933:534027..534642Clytia hemisphaericaexon
TCONS_00003903-exon-sc0000038-1575043694:534027..534642TCONS_00003903-exon-sc0000038-1575043694:534027..534642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:519770..534642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.16976	11.1194	1.83723	4.22991	2.87096	5.21733	5.95489	5.80251	5.55664	4.64567	4.20004	1.57089	2.10257	1.36572	2.66154	1.85946	3.58846	3.36154	2.75615	1.34135	3.26992	2.96108	7.54413	4.26386	3.28489	3.41942	3.49152	1.69516	5.85446	5.18331
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003903 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top