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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003844 ID=TCONS_00003844|Name=TCONS_00003844|organism=Clytia hemisphaerica|type=transcript|length=1064bp
GGCTGGCTGGTTTCTGTGTATTTGCTATAATGACCCAAAGAATGGCTTTG
AAATACTATGttagagaattttttgatgattaaaaataattttctagcaT
TGTGATATGACCAAAAGTCCATAACATTCTTTTTTGTGGCCTGGCTCTTT
TCAGACTGGCCTGGCTCAATgtttttgtgctattttttgtGAACTGTCAG
ACTGTGTTTTGTTGGAAATTAAGGTTTTCAGTTAGTTTACCTGGCTTTAT
GTTTGTTCAGATGAAAAGTATTCGGTTTAATATTGCTCATTTGATTTCGA
tataacttttttcaatttatttaggtgtaaaatatatataatataaaaaa
acatcaaaatagtCAACCATAAATTCTGTATATATCCTGCTCCTTGAAAA
GGCATTTCAAAAACAGATGGACGACTTCAAATCAAGGATATCTTCAACAG
ACGAGATGTATTGTGattagaattgaaatatatacATCTAACACccaatg
ctgaaaaatattttgtcgcaATGATGGTTTTTGAATCATACAGTAACTTt
aattttctggctattttattaTAAACACCGAATCAATTTGTCACTGGATG
GATTCTTTGGATATCTTGATATACGTGGCTTGGCTGGTAGACTTGGTAGA
TTAGAATTATCAACAGCGATGATGAAAAGATTGCTACTAACACTAACAAT
ATTtggaatatcttaaaatttggaTAATGTATTGTTCACACTGTCACTAG
AGACAGAGCTCATAGCAGGCTACAAACTGAAATTGTGAGGGTTATTGCAT
CAGtatatatatgaaaatatttggtACCCCAACCGTAAAATTGTGATGTA
TGTCATTTGTAGAAAGTGGACTAAAATATACAATTGATTATGCCTGGGTC
ATTGACTAAATAAGCGCCATCTGTCATCTCATGGACAGAATCTgagattt
acaaaaataacaTACATTCAATTGGCTAAAAATGGAAAGAGTATTGAAAG
CTTGGATATTACTTTTAAAACAGTGTGCCAGATTTTTAATTTGGCAAGAC
TGGTTTCTGGCAAA Run BLAST on NCBI transcript from alignment at sc0000031:563186..564249 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003844 ID=TCONS_00003844|Name=TCONS_00003844|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at sc0000031:563186..564249 (Clytia hemisphaerica)
TTTGCCAGAAACCAGTCTTGCCAAATTAAAAATCTGGCACACTGTTTTAA
AAGTAATATCCAAGCTTTCAATACTCTTTCCATTTTTAGCCAATTGAATG
TAtgttatttttgtaaatctcAGATTCTGTCCATGAGATGACAGATGGCG
CTTATTTAGTCAATGACCCAGGCATAATCAATTGTATATTTTAGTCCACT
TTCTACAAATGACATACATCACAATTTTACGGTTGGGGTaccaaatattt
tcatatatataCTGATGCAATAACCCTCACAATTTCAGTTTGTAGCCTGC
TATGAGCTCTGTCTCTAGTGACAGTGTGAACAATACATTAtccaaatttt
aagatattccaAATATTGTTAGTGTTAGTAGCAATCTTTTCATCATCGCT
GTTGATAATTCTAATCTACCAAGTCTACCAGCCAAGCCACGTATATCAAG
ATATCCAAAGAATCCATCCAGTGACAAATTGATTCGGTGTTTAtaataaa
atagccagaaaattaAAGTTACTGTATGATTCAAAAACCATCATtgcgac
aaaatatttttcagcattggGTGTTAGATgtatatatttcaattctaatC
ACAATACATCTCGTCTGTTGAAGATATCCTTGATTTGAAGTCGTCCATCT
GTTTTTGAAATGCCTTTTCAAGGAGCAGGATATATACAGAATTTATGGTT
Gactattttgatgtttttttatattatatatattttacacctaaataaat
tgaaaaaagttataTCGAAATCAAATGAGCAATATTAAACCGAATACTTT
TCATCTGAACAAACATAAAGCCAGGTAAACTAACTGAAAACCTTAATTTC
CAACAAAACACAGTCTGACAGTTCacaaaaaatagcacaaaaacATTGAG
CCAGGCCAGTCTGAAAAGAGCCAGGCCACAAAAAAGAATGTTATGGACTT
TTGGTCATATCACAAtgctagaaaattatttttaatcatcaaaaaattct
ctaaCATAGTATTTCAAAGCCATTCTTTGGGTCATTATAGCAAATACACA
GAAACCAGCCAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003844-exon-sc0000031-1491911889:563186..564249 | TCONS_00003844-exon-sc0000031-1491911889:563186..564249 | Clytia hemisphaerica | exon |
| TCONS_00003844-exon-sc0000031-1510915933:563186..564249 | TCONS_00003844-exon-sc0000031-1510915933:563186..564249 | Clytia hemisphaerica | exon |
| TCONS_00003844-exon-sc0000031-1575043694:563186..564249 | TCONS_00003844-exon-sc0000031-1575043694:563186..564249 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:563186..564249 . |
Blast
The following BLAST results are available for this feature:
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