TCONS_00003796 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003796
Unique NameTCONS_00003796
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1959

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003796 ID=TCONS_00003796|Name=TCONS_00003796|organism=Clytia hemisphaerica|type=transcript|length=1959bp
TTTCAGGGTAACatataataaataatataaaatatagaaaaatggATTTG
ATAACTCTGGTACAAGGATGTGCAATGGTCTTCACTTTTGGATTCTTCTT
TTCGGGAAGCGCAGCTGTATTGAAAGTCCACCAACAAAAATCtgttaaaa
atgtcaattttttgccaTATCTTGCTGCTACTCTGAATTGTTGTTTATGG
ACGATCTATGGTCATTTGAAGGGCGATTGGTTATTGATATTGGTCAACGC
AGTGGGATGTATATTGCAAGCGATttacattttcatcttcatgcAGAATT
GTGATAATAAGCCATACTATCTCAAGAAGGTGTTTGTTTTACTGACAACA
TGTTTGGGTGCATTATCATTCGCTTACCTGGGTACAGATCTCTTCGATGT
CGTGCGGTCGCTTGGTTTGTTCGCTAGCACTGTTACCGTTCTTATGTTCG
GCTCACCATTATCTGTTCTAcgtGTTGTCATAGCAACGAAGAGTTCCgaa
caaatttcttttcctttaTCTCTAATGACCGTTTGTAATTGTTTTTCCTG
GCTTGTGTATGGTTATCTTATCAAAGACAGCTATGTACAGGTACCCAATT
TCTTTGGGCTTGTTCTAGGTATTATCCAAGTCCTAACGATATACCAATAT
CCAAACAAAACAAGCCGTGTGGGTTTAACGTCTCAAGTGTAATACAATCA
ATTTTTTCTTGGCCctattaaattgaaaaaattatctTGATTTTTACAAG
AAGGTTATTGAGTAACTGACGCGTTCTGTGAGGCTAACATCTCTTGGCTT
TAGCAAGGTCAACCTCctgtaaaatgaaatattgagtAATAATTATGTAA
TATGTTCTGGTTGATCTTAATCACATAACGTTTGTCATTGGATTGCATCA
CCCACTTTTACATGTACAATGTGATCACCAAATGCATGTTTCTTGGATAA
TGCTTCTTGTCCATGCTTTTGGATAATCTACATTTGTCTATGCGAACCAA
AGCGTTTGTTGACTTGACTGGATATCTATGTGAATTTTGCGGCGGGTgtg
attgggcttttccagaaaaaaaaccgtataccccctgttgaggagggcCC
TTCCTCTGTggctggaattctgaattttagtaggatttaaaaagctaccc
catggaattccagttatttttgacagatttttgtatctcaatatggaatt
ccgccacatatcaaaccttaccccctttgGAACGGAAATGAACTCCTCAA
CAttgggtatacggtttttttctgaaaaagcccattttcaattgttttca
caATGAACATTATATATATTGTTGTATCATTTTCGCTTCTCGATATTTTA
GATGTTTCTATATATTGTGATTTTTAGTTCATGATGACTTTGCATGCGGT
AGTTCATTTTTAACTTAGGGTGACAATAATACAAATTTAGAGAATTATTT
TTGATGTGCATTTTCCTATTTATGACTACGAACAAAACTGGTAAGATAAT
ATAAGGTTTTTACAAAAAACTTGATCCTAATGCTTGCTATTAGATATTTT
CCTTAGACAAGCCatattctaaaaaggtaggGTAGCGTCCGTTTTAGACC
AAAAAGGGCACTTCCTACTGTTTCTCCACAGAAAATCATAATTTGTTACA
AAGAAGGGCAGGGTCTGACGCCTAAAAGGCATGAAGAATGGTCTGTTAGA
TTTTGTATGCAGTGTTTTCTGCAGTGGAGAGTTTTTTATTAGGTTTGATC
CTGACTGGCCGAGAACGACTGTAAATCATAACTTTCTACACTTTAGCGGT
CTTTAGAGGTTACTCTTCGAGAGTGAAAATATCACTGTAATCAAGATTTC
AAATTCTAGTGCTCTAACAGTCGAGTgtatgttttttatataagaacaag
ctatataaaAATACGAGGCAAAAATgtcaagaacaaattaagagcatttt
aagtcTTTG
Run BLAST on NCBI

transcript from alignment at sc0000031:269768..278929-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003796 ID=TCONS_00003796|Name=TCONS_00003796|organism=Clytia hemisphaerica|type=transcript|length=9162bp|location=Sequence derived from alignment at sc0000031:269768..278929- (Clytia hemisphaerica)
TTTCAGGGTAACATATAATAAATAATATAAAATATAGAAAAATGGATTTG
ATAACTCTGGTACAAGGATGTGCAATGGTCTTCACTTTTGGATTCTTCTT
TTCGGGAAGGTATACATATTTTAAACTTTTCTGATTNTTCTCCTGTTTCT
CTGAGGTCGGTAATATTTATCCCATGCTTATTCAAAAAAAAAAAAATTTC
ACTTTAAACAATTTCCACGTTTATATTTTTCAGGGTAACATATAATAAAT
AATATAAAATATAGAAAAATGGATTTGATAACTCTGGTACAAGGATGTGC
AATGGTCTTCACTTTTGGATTCTTCTTTTCGGGAAGGTATACATATTTTA
AATTTTTCTGATTTTTATGATTTTCATAAGACAGTTGACGCTCTCTTATT
GGACGTTCTACTATTCGATAAGCTCCTTTATTCGAGGAAATTTAAAGTCC
CCGTCAACAGAAACTCTCCTAAACGACCTTCCCTTATTCGATAAGCTCCC
TTATTTGATGAAAATTCTTCTTGAAGATCGAATTAGAGAGCGTCAACTTT
ATTATGCATTACAGTAGAAATTTCGGTGAAAAGAAAATTTTGCTGATTTG
TAGTTTTTAGGTTCCTCCGTTTTTCTTGCGACATCTGCCGAAAAATTCCG
GCCAAATTTAATTTATTCGTTTCATTTCAGGTAAAAAAATTTAAATTTAA
CTTTATTTTGCGTTTCAGATTCTTATGATTTCATGATATTTTTACACCGC
TCATGGTTTTAAGAGTTAGTTTATAGGTCATATATTCAAAAAAGAAAATA
CCTATGGGAGACCTTTTATATTTATGTACCAGAACCAACTTACAGTAGAA
GGTCTGTTTTACGATTTTCAAAATCTGCGTAGGGGAAACTTTTCCCATAT
AGCATATAAATATCTAGAGGGTCTTTCGCGGAGTTTATTTTTCTCATTAT
AGTCAACAGCCTGGTTCCGGACATTTGTGCCCGGACATTTGTGGCGCAGG
CGATAAGCATTATAATCATATCACATTTTGAATTGTTTCTCGTTTATTTT
CAGCGCAGCTGTATTGAAAGTCCACCAACAAAAATCTGTTAAAAATGTCA
ATTTTTTGCCATATCTTGCTGCTACTCTGAAGTGAGTTTTGGTATAATAC
TTTTTTTTTGTTTCTTGTCCCATTCTGTGTTTCCCTCATAGATTTATAAA
GCCCGAAGGGCTAGATGTCATGTTTTAAGCTCTTCCATGCAAAAAAGGTG
AATATCACAAAAAAAATATTGCTTTTGTTTTCGAAAACCCGCGAAGTATC
TTATTGGTCAAGCGCTGAAATTCTATTGTTATTATCACATGACCTAGGTA
AGATTTCCTACCTAACCTTGGCACACTTTTCAGCGAAAGCACGACATCTA
ACCCTTCGAGCTTTATATAAATCTATGGTTTCCTTTGATTTGGCCGTCAT
CTAGTTCTTCACGAGAAACCTTTGCATATTTTACTACAGTAGACACTCTG
TTTTTCGAAATCACATCTTCAGAATTCGAAAATCTCGTTTCCTACAATGG
ATCACGCTTAGCGAGTTTAGGTCTGCTGTTTTTACTGTAACGGAGAAGGT
TAGCTTTTGTTTTGTCTAGGTCAGAGGACAGAGACGGCGGTAATTCAACA
CTTTAACCGTCCTTGATTTTGCAAGTCAAAATTTAGGGCTGTCCCAAATC
GTAACCGTCTAAATGTTATGTTCGCTCCGTTGTCTTAAAAAAGGGAGATA
CATAAGCCCGCTAATAATAAGCCCGCTAATAATAGGGAAAAGGAAGAAAC
ATGTGATTCTTAGGGAACATCGAATAAATTGAAATTTCAATTTTTATACA
ATAATTTATATACAATATACAGACAGATTATAGATAGGTTTCAAGATGTC
TTTCGATTTTTTTGTTTCTACTAGTTGTTGTTTATGGACGATCTATGGTC
ATTTGAAGGGCGATTGGTTATTGATATTGGTCAACGCAGTGGGATGTATA
TTGCAAGCGATTTACATTTTCATCTTCATGCAGAATTGTGATAATAAGGT
AAGGTATCTTTTGGGTCAGTCTGGGGGTTTTTATAAGACACAAATACTCT
GAATTTTACAGAACAGCAAGAAAAGCATTTACTTACTCACCTCAAAATTT
ATTTAAACAAAACACTTTGGTTTGGCAAAAATAAGGAAGAACTACACAGG
AAGAAATCTTTAGCCGACGTTGTAAAAACTCCAGATCATCTGTATCTTTT
GCTCAACGCTCAACTCTCTTGAATAATTTGATTTTCCAGGTACCACAAAT
TTTACTCCCTCTAAAACCATAACCCCTAAAAAGAAACAAAACTGCTCAAC
TACGTGCGTCGCGTTACGTCAGGGTTCGAAATAACGGTCGGACATCGGAC
ATTGTCCGACCCAAATAGCTTCATGTCCGACCCAAAAATCATAATTTTCA
AGCTGAAGCAACCCTGATCGGACATTTTATCCGACCCACTTGAAATCGTT
ATCGTTATCGTTACGTTCACTAGCACGTTCAAATCACCATGATTCGTTTT
GATAATGTATTGATTTCGCAAGGTCAACATTTTCAACAGGCTTCGATTTA
AATATCGTTGACCTGGCTTCAACCTAACTTTCTCTCTGGGACCAAAAAAA
CCGTCCCAGTAAGGCAAACATTAAATTCATAGAAAATAGAATTAATTAAC
TACTGTAAAAGTATAAATCTTTGTAAAAATGGTCTTTCACCGTTTTATGG
ACATTTCATATGCTTCTTATTTTTCTCCTACCAAAAAGAGATTTGTCGTA
CACCTCATCAAAAAATTACACTCGTGGTTGTGTATGATACCACCCCTCGA
GCGTTTCCTTTTGACTATAACAGTCGGCCAATCAAAACCATGTGCGAAAG
CCCAATTAACACATACAATACCACCCTGTAGAAGAATTTCATACGGATCG
GCACCACTACTTCTTTGTGCACCTCCTTGTAAAAGAACTTCGTACGGACC
GACGCTCAATACACGCTGAGCCCATTCGTCATCTTTATTTTTGTCATAAA
CTGAATATTTTTTACTTAAAATACCCTCGATAACTAATATTCCACCAGTC
GTCAGCTCTCTAGCTTTGTCCAATGCTTGGACTACTGTACTGCAATAAAT
TGGGTGGCACCCACGTGGAAAGTTGGGCGGTGGCGTTGTCAATGCATCAG
CATAGGGGAATTTTTTTTCATTTGCGATTTTTTGGGCTTCTAAGACAATT
TCTTTGCTATTTCTTAAGTTTAGTGTGAGATTTATTGTTGTATATGCACT
TATGTTTATAAACTGTTGGCGGATGGAAGCAGCTGAGGCAATCCAAATTA
CTTCAATTGAAGCGGGGAGCTCAATTTCTTCCTCGATAGGCCATTCGTCC
AAGAAAAGTGCTTTGATTCCTCTTGAAAGTACTTGTCGTACTCGCAAACT
TTCTTCCTATATTGAAAATAAAATACCGTATTACTTCGAAAATTTTTAGA
TTTTTAGGAGGGGTGTTTATTCGAGGGAGCGTTTAAAAGAAGGAGGCGTT
TATTGAATAATTTAGAACCGAGTATAAACTGGAAACTTATTTTGCCTTTT
CATCATGATTTAGTACAAATATGTCAATTTTAGGGATATAGAAACAGGTC
AAAACCAGATCGAGTTCTCAAACATAGAGTTTACAAAAATCATGGCGAGA
ATCCAAATTCAGTATGACTTACTGTTGATGCTATTATTCCAATGCCGTGT
TTTTGTAAGTCGTACTTCAGTCGTCTTTCCAGTAAGCCTGCTAGTTGTGG
CCCATTATTTTTATGAACCGCATACATAATGTTTCCCTGAAACTTCGGGT
CATTGCTCAGTAACAGAGCTTTTTGTTGGAGAAGAAAACTTTTGCCTGTA
CCGTAACCACCCTTTATTATGACTTTTCGGTATCGAGGCTCGTCGCTAAT
AAGCGCTGGTAGTTGTTCCTTGGAATGGAACAGAATGGTATGACTGGTAC
ATACTGAATCGATAGCTTCACTGATGTATTCTACCCAATTTGTGGTTGTG
ATTGGTGCTATTTGACCCTTCTTTGACACGTGTATAGCGAACACAATCAA
TCTTAAGACGTTTTTGAGTTGATATATTGGAGGTAATAATGGTGTAATTT
CGAAATGGTAAATAGGAAAGTGCCTAAAGATGGACTCTAACCATGATTGC
AAATCAGTTTTAGTGCTGATATAGTGTAAGCTTTCAAACATAAGTTCCTC
CACGCCGACACATATTACAGGGAAAAACGTCCAACCTTCACCGAACTGAT
CACCCAGTCTTTCTTCGAATAAACTGTGGTATTTTTCTAGTTGGTCAAAT
GCCTTATCAGTGAGTTGTCGTTTCATTTCAATCCCGATGACGAGTTTCCT
GGACCAAGAGAAAATGACAAGATCAAACTCTTGGTGCATCTTCTTTTTGA
CGTTGGTTAGAAAACAGACTGATTGAAGAATCACTGTATCGTTCAGGATG
CTTTCTCTATTCATGGATTCAAGTCGGTCGAAAATTTTATGCTCGATCTC
TTCGCCTCGTTCGGGAAGCTTTAATTCAAAAAACCATCTCATGTTTGAAT
CTTCAGGTGGGTTTTGTTGAATCAGCTCTTCAACTTCTCGATTTAGATAC
GATCTACCATTTTTGTTTTTGTTTTGTAATTTCTGAAGACAAGTCTGAAG
CTTAGTTTCGAGCTCAGATCCTGGTGATTCTTTTGCCAACTCAGAAATAC
AGTTCTGAATGAAAACATCCGTCTTTGAAATTGTCGAAAAATTTATTTTC
TTTAATCTCAATTTTTTGGCATGTATAGACATAATTTTTGCATTCAGTAC
CCATTGGTTGAAAGCTTTGGCGTTTATATCTTTAATATTATCCTTTGAAA
GTTTTTCCAACTGAAGAAATTGCTGCAACTCTGCCGTGAACCAATTTTCT
TTCGACTCCTTAAGCATATTATCCAGTGTTTCGAGAATCAGCTTTTCAAT
GTCATAATCTAGAAGTGGCAGAGATGATTTTTTGGTGTATTGATTGGATC
GGAAAACTGGTGGTATAAACACTGGCTCGTGCCGTGATTGGTTGAAAATT
GACGATTTTCCATACTCTCGTTCAAGCAAGTAGTCGGCAGCTTGAATTGG
ATCGGTGAATGTTTGGCCATTACCAAGGTTGAATTGTTTAGCTTGCTGCT
TCAAAGTTTTTGATGAATCCCTCGAAACCTGTTGATGCAATGATTTTTGT
ACTGTACATTTTGTATAATCAATATCTCTTGGTTTTAATGTTAACAATTT
CTGTCTAAGATCGCAAGTCATCCTTTTTGCAACAAGATTTCTTCTCAACT
TGAATCTTGATAGTGTTTTTTTTCAATTCGGATAGTTTTCATATCATTAA
AACTATGGTAATATAATGTTTTATTCATCATTTTTTAGGTTTTCATTACA
TTGTTTCAGTTCGTGGTTTGTTTTCATATGTCTATACCCTTTGATGAATT
TTTTATATACAATCAATATACACTTATTTTTTATAAGCATGTCCAGGCAT
AAATCTCGAAAAAATTTAAGTGGGCCTCAGTTTGCGAAATTTCAAAATTT
GAATTTAAGATTTGCTAAAATACTCTATGAAAATCGAAGTTAGAGCCCCA
AAAATATTTCTTTATTTTCCATGGACCAAGCTCTATCCACCTTCTTTGAT
TGGAGCTTTTAGAAAAAGGTGGTACCCTAATGGTAGCACGACTGGATGAT
GGTCAATTTGTAATTCAATCAAATTTTCCGCTTAAAATTTTTTAAACATC
GTTGAGGAGCGCTACCATTAGGGTTACCACTTTCAAAATCTCTGGTTGAA
GACTTTGCTTGGTCGGGATCGAGAAACTGTGACAGGCTATATAAAGGTCA
GTTAGGGGAACTGGTGTTTTAATCTCATATTCTCGCATTAAAAGAAAAAG
CTTTAAGTCTATTTTTTGGAAAATTGAGTTATGACCATACTGATGCTTTA
CGCCTCATTTTTATCGATTTTTTGACTTTTAAAAATCCATCAAAAACCAA
CCTAAAGTGGTCTAATTTTAAGCTAAAAAAAAGCCTAAAAAGTCTAACGT
GGAAGTAATTTTGGACTTTTCAGCCATACTATCTCAAGAAGGTGTTTGTT
TTACTGACAACATGTTTGGGTGCATTATCATTCGCTTACCTGGGTACAGA
TCTCTTCGATGTCGTGCGGTCGCTTGGTTTGTTCGCTAGCACTGTTACCG
TTCTTATGTTCGGCTCACCATTATCTGTTCTAGTAAGTATCTGCAATACC
TTATCGGCCAAAACTTAGTCGGCCCAAGTGACCAAATTTTGGCTTGGTGA
CTAAAATTAGGGCAGACTAAAAATTTGGCCCGAATAAAATTTGGGCCGAC
TAAAAATTTGGAAATGGCCAAACCTTAGTTATTAGTCGGCCCTTTGTGAC
TAAATTTTGACGAGGTGACTAAAATTAGGGCCGACTAAAAATTTGGAAAT
GGCCAAAACTTAGTTATTAGTCGGCCTTTAGTGACTAAATTTTGACGAGG
TGACTAAAATTAGGGCCGACTAAGTTTTGGCCGATAGGTTACATAACAAT
GGGACTGGGTTCGAGTTAAAATATTATCTTGTTCTTGGATCTATGAGCAC
GCTATGATGGTATTATTCCAGACTTTAGATGCCCTTTCATCTTCTGATAA
ACTTATATAAGAGGATAACTCTTTGGCGAAGAAATTGAGAAAAATCTTTT
GATTAAAATTGTCCTATATATGTTAAATGTGGTCCAATAAAATTAGTAAT
AGGAGCATTTAGAATTTCCACCAATATGGAAGCAAACGTTCGATTTGCGT
AAGGGATTGTCTTACAGATACGAACATTCGCTTCCATAATGGCGGAAATT
ACGTTACTTAAACGAAAGAGAGAGAGAGTTCTCTGCACCTGAATTTAAAT
CGTCACTTTATCACTTTCGTTTTCAGCGTGTTGTCATAGCAACGAAGAGT
TCCGAACAAATTTCTTTTCCTTTATCTCTAATGACCGTTTGTAATTGTTT
TTCCTGGCTTGTGTATGGTTATCTTATCAAAGACAGCTATGTACAGGTTT
GTGTGGTGTTCTTTTTATGAAAATCTTCGTGTTTGGACCAGCGAATAATT
CTCAATTTGAATAGTGACTGGTTCCCTTAAATGGGCACGTTCTAAGCCCA
TTTCTAAAGTAACGGTATTTTACCCTTGATTAAGTTTCCCTTAATTTCGA
CGTGATGTCATGTGTTTTAAGGTCTGTTTCCATCGATCGCGCGACCGTGC
ACGCCAGGGCAAAATTTCCTAAAATAACCTATCGACGTCACAAATTCAAT
TTTCTTGTACTCAAAAAGTGTACGCTCTTGTACGCTTTTGTGCTCTTTTC
TACGCTGAAAATTTTCAAATTTTTTGAGCGTACAGGAGCGCACATCTCAA
TTGATAATTTTTCAACCAATCAAGAAAGAGAAAAACTGCTGAGTAAACAA
AAAAATGTAAACATACAGATTGTGTATGTTTTTGATGGAAATCAAACATT
GATCGCGCGGAGTGTGCGGCCAAATCTATTTTAAGAATTTTGGCCTAGCG
TGCACGCTCGCGTGATCGATGGAAACAGGCCTTTAATAGATAATTAATTA
CGCTTTTATATCGTTTGGGATGTTCGGAGGTTTCACATTATGTACGTAAT
GTTATGCACCCCCTTTTCTGGGATTGTTGTAACTTCTTTTAACAAATCTA
TCTTCTCATTTTGCTTACTTTTTTATTTTCCCTTCTTTTCTAGGTACCCA
ATTTCTTTGGGCTTGTTCTAGGTATTATCCAAGTCCTAACGATATACCAA
TATCCAAACAAAACAAGCCGTGTGGGTTTAACGTCTCAAGTGTAATACAA
TCAATTTTTTCTTGGCCCTATTAAATTGAAAAAATTATCTTGATTTTTAC
AAGAAGGTTATTGAGTAACTGACGCGTTCTGTGAGGCTAACATCTCTTGG
CTTTAGCAAGGTCAACCTCCTGTAAAATGAAATATTGAGTAATAATTATG
TAATATGTTCTGGTTGATCTTAATCACATAACGTTTGTCATTGGATTGCA
TCACCCACTTTTACATGTACAATGTGATCACCAAATGCATGTTTCTTGGA
TAATGCTTCTTGTCCATGCTTTTGGATAATCTACATTTGTCTATGCGAAC
CAAAGCGTTTGTTGACTTGACTGGATATCTATGTGAATTTTGCGGCGGGT
GTGATTGGGCTTTTCCAGAAAAAAAACCGTATACCCCCTGTTGAGGAGGG
CCCTTCCTCTGTGGCTGGAATTCTGAATTTTAGTAGGATTTAAAAAGCTA
CCCCATGGAATTCCAGTTATTTTTGACAGATTTTTGTATCTCAATATGGA
ATTCCGCCACATATCAAACCTTACCCCCTTTGGAACGGAAATGAACTCCT
CAACATTGGGTATACGGTTTTTTTCTGAAAAAGCCCATTTTCAATTGTTT
TCACAATGAACATTATATATATTGTTGTATCATTTTCGCTTCTCGATATT
TTAGATGTTTCTATATATTGTGATTTTTAGTTCATGATGACTTTGCATGC
GGTAGTTCATTTTTAACTTAGGGTGACAATAATACAAATTTAGAGAATTA
TTTTTGATGTGCATTTTCCTATTTATGACTACGAACAAAACTGGTAAGAT
AATATAAGGTTTTTACAAAAAACTTGATCCTAATGCTTGCTATTAGATAT
TTTCCTTAGACAAGCCATATTCTAAAAAGGTAGGGTAGCGTCCGTTTTAG
ACCAAAAAGGGCACTTCCTACTGTTTCTCCACAGAAAATCATAATTTGTT
ACAAAGAAGGGCAGGGTCTGACGCCTAAAAGGCATGAAGAATGGTCTGTT
AGATTTTGTATGCAGTGTTTTCTGCAGTGGAGAGTTTTTTATTAGGTTTG
ATCCTGACTGGCCGAGAACGACTGTAAATCATAACTTTCTACACTTTAGC
GGTCTTTAGAGGTTACTCTTCGAGAGTGAAAATATCACTGTAATCAAGAT
TTCAAATTCTAGTGCTCTAACAGTCGAGTGTATGTTTTTTATATAAGAAC
AAGCTATATAAAAATACGAGGCAAAAATGTCAAGAACAAATTAAGAGCAT
TTTAAGTCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002112XLOC_002112Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003796-exon-sc0000031-1575043694:278821..278929TCONS_00003796-exon-sc0000031-1575043694:278821..278929Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1575043694:277799..277876TCONS_00003796-exon-sc0000031-1575043694:277799..277876Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1575043694:276882..277005TCONS_00003796-exon-sc0000031-1575043694:276882..277005Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1575043694:272648..272806TCONS_00003796-exon-sc0000031-1575043694:272648..272806Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1575043694:271834..271953TCONS_00003796-exon-sc0000031-1575043694:271834..271953Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1575043694:269768..271136TCONS_00003796-exon-sc0000031-1575043694:269768..271136Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:278821..278929TCONS_00003796-exon-sc0000031-1510915933:278821..278929Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:277799..277876TCONS_00003796-exon-sc0000031-1510915933:277799..277876Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:276882..277005TCONS_00003796-exon-sc0000031-1510915933:276882..277005Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:272648..272806TCONS_00003796-exon-sc0000031-1510915933:272648..272806Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:271834..271953TCONS_00003796-exon-sc0000031-1510915933:271834..271953Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1510915933:269768..271136TCONS_00003796-exon-sc0000031-1510915933:269768..271136Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:278821..278929TCONS_00003796-exon-sc0000031-1491911889:278821..278929Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:277799..277876TCONS_00003796-exon-sc0000031-1491911889:277799..277876Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:276882..277005TCONS_00003796-exon-sc0000031-1491911889:276882..277005Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:272648..272806TCONS_00003796-exon-sc0000031-1491911889:272648..272806Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:271834..271953TCONS_00003796-exon-sc0000031-1491911889:271834..271953Clytia hemisphaericaexon
TCONS_00003796-exon-sc0000031-1491911889:269768..271136TCONS_00003796-exon-sc0000031-1491911889:269768..271136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:269768..278929 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.9498	22.1604	20.7277	23.6569	0.196359	0.147183	0.306456	7.34224	9.14043	7.30134	7.50447	8.07182	7.5347	9.34282	7.72584	9.88712	8.38664	10.2219	7.41242	7.19859	6.06272	5.86398	18.536	17.2832	6.27013	9.3507	4.77649	3.67159	12.3763	12.5233
Blast
[Close]
BLAST of TCONS_00003796 vs. Swiss-Prot (Human)
Match: SWET1 (Sugar transporter SWEET1 OS=Homo sapiens GN=SLC50A1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.205e-29
Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 3 
Query:  123 KVHQQKSVKNVNFLPYLAATLNCCLWTIYGHLKGDWLLILVNAVGCILQAIYIFIFMQNCDNKPY-YLKKVFVLLTTCLGALSFAYLGTDLFDVVRSLGLFASTVTVLMFGSPLSVLRVVIATKSSEQISFPLSLMTVCNCFSWLVYGYLIKDSYVQVPNFFGLVLGIIQVLTIYQYPNKTSR 668
             +   +SV NV FLP+L   +N   W  YG LKGD +LI+VN VG  LQ +YI  ++  C  K    L+   +L    LG   F  L  +    ++ LGLF S  T+ M+ SPL+ L  VI TKS++ +S+PL++ T+    SW +YG+ ++D Y+ V NF G+V   I+    ++YP +  R
Sbjct:   32 HMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDR 214
The following BLAST results are available for this feature:
BLAST of TCONS_00003796 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWET13.205e-2937.70Sugar transporter SWEET1 OS=Homo sapiens GN=SLC50A... [more]
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