TCONS_00003790 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003790
Unique NameTCONS_00003790
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4516

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003790 ID=TCONS_00003790|Name=TCONS_00003790|organism=Clytia hemisphaerica|type=transcript|length=4516bp
AACAggggcaaaatgacgtcatggaATAATTTCTGTTCGGTCTCTTTGAA
CGTTCGACGAGGCCCCCAGCGTGGTGGCATGATTGGGCTTTTTATGGATT
GATCTATGAGTTCAAAAAGCGTTGATATGTGATTTATTTAAGAGAATTAT
TTCGGTTCgatggcgtgatggcgtgatggtgTAATCTTCGAGTTCAAAAA
GTGTTATGTCTGGTTGATAAGAGAATTATTTTGGTTTGATGGCGAATGAT
GAGAAGATATTCTTGGCGTGATAACGTgattagaatttcttttggattCC
ACTGGAGGGAGGGGGCTCTTCGATGTTTTTGGATGTTGTTTGTCTAAATA
AATTGGGATCTTCTTTTAATATTGATGTTCTTTTCGAGGAAATATTTTAT
GGAATCCTGAATGTGTGgaatttattaaatattttcactCATAATCATAC
AATTTTTGTTCCTAGGTATGAGAAGTTGACCAAACGAATTTTAGAATGgt
ggaacaagaaaaacccatTCCTCGTTCACAATTCATATTTCTCCAAACCC
GAATCATATTTTGCCGACAACTTCGATAAAGATCGAGTCGAAGAATTTCA
TAACGGGAATAAcccagaaaaaatgttttcaccTACGGAAAGGTCCCGGA
TAGTAGCTTACATCCTGGAAAGCACGAAGTACGGTGATAATGATGATGAA
ATCGGGAAAGACGGATTATTAGAAAAAGGCGTTCTAACGGCCGCCTACCC
TATTCATGACGGCTTGCTCGAACCCAACGAAAACGAACCTTTATTAAACA
ACCGTCAAAAATTATCCCGTGAATGGGCGTCATTCGGACAAACTTTTAAA
TACCAACCCATTGAAGGTATTAAAGAATACTTCGGTGTTAAAATCGCGTT
TTATTTTGCGTGGATTGGGTTCTATACCACGTGGCTCGTTCCAGCATCCC
TGATTggtttaattttcttcttttttggtTGTCTGTCAAACTTATGGTTT
ATACCGGTCCAAGAAATATGTAACGCCGAAAAGCCATTTTTCATGTGTCC
ATTATGCGATAAAGTTTGTTCGTACTATTTCTTACACAACACTTCATGCA
CTTACTCCAAAATGACTCACTGTTTCGATAACGACGGTACTCCCATTTTC
GCCGTATTCATTTcaatctggtctgtattttatctGGAATATTGGAAAAG
ACAACAGTGGAGTCTTTCTTATGAATGGCACACGATGGATTTTTGTGAAG
AAGAAGTCGTGAGACCTCAATACACAGCATCGGCCAAGAAATTTAAACAG
AACCCGATTACCCGAAAAATGGAACCGATCGCATCCAAGAAAGAACAAAT
GCTTAAAATCGCCGGTGAAGCTTCAGTCGTATTATTCTTCATCGCACTCG
TAATCGCAGCTTTAATCGGCGTTATCGTGTATCGTGCCGTCATTTTCGGG
ATCCTTATCGCAGCTGATGGTCgtttaagaaaaaattcaaaactgttTGT
GACCGGCACAGCAGCTACGATTAATTTAATCGTCATTAACGTGTTAAAGT
TGGTTTATCGCAAATTAGCTTTGATTATGACAGAATGGGAGAACCCAAGA
ACACGAACTTCTTATGAGAAGTCCTTCACTTTGAAGATGTTCTGGTTCCA
ATTCTGTAATATGTTCTCGTCCGTTTTTTATGTTGCTTTcttcaaaagtg
aatttttcgtTGGATACCCTGGTAATTATAGGAGGTTTGGGACCAAGAGA
AGTCGCCTTGAAGGATGTTCAGAGCAAGGTTGCTTTCTTGAACTTTGTAT
ACAATTGGTCATTTTGATGGGTGGACAACAGTTGTTGGGAAATTTCGTCG
AAATATTTTGGCCATATTTACAAAAGAAGTACAACCGATGGAGAAACAAC
ATCAAATCTGATGAAAACATGACCGTATGGGAAGCGGATTACCAACTAGC
TGAACAAGAAGAATTACAATTGTTCTGGGAATATCAGGAAGTCGTTTTAC
AGTACGGATTTGTGACGATGTTCGTGGCTGCATTCCCATTGGCGCCACTC
ATTGCTCTCATCACAAACTTGATCGAAATCCGCATCGATGCAACCAATAT
GATCAAAGCATACCGACGGCCGATCGCATACAAATCGGAAGGGATCGGTG
TGTGGTATGATATACTGGTCACTTTAACGACgATTGCCGTTTTGGTAAAT
GGTTTCGTCCTTTCGTTAACATCCGAGTTCATTCCACGTTTGGTTTACAA
GTACCGGTATAGTCCGGATATGACGTTAACCGGATATGTGGAATGGAGTT
TATCTAAATTCAATATTTCCGATTTTTCGCCAGATGAGAGTCCGTtgaat
atgccggaaattgaAATTCTGCAGACGCATGTTTTTAAGAGGGTGAACAA
GACAGTGTGCAGATATCCTGGTTTCCACGTGAACAACGAATCGCACGAGT
TTAGCATGGTTCATTGGTATTTAATGACAATCAGGCTAATGTTTGCCTTC
CTCTTCCAATGGATTGTATCAGCCGCTGGTCGTATTTTAGCCTGGATCAT
CCCTGACCGTCCACGCTCACTAGACTTAAAAATTAAACGTCAAGAATTTC
TGGCTAAAGAAGCATTACGTAATTATAAAATTAAGACGGGTAAAAGAATG
CCGGAAGCCGAAAATGTCTCAGAGGAGGAAGAGGAAAGTGATACATCGGA
AAGTAAACGGAACTCGGACCAAGCAAACGGAACAACCCCGGAAACTGGAA
ATCCTTCTAATAGAGACAATACGGACAACGCCGTTGATCAAGATATCCGG
ATTAAAATTCCAGATCGAAGCGCTTCTACAATGGAAACGACTTTTTTAAT
TGATCCAGAGAAGAAACCAACTTCTCCGAATTACTCTTTCGAATATTTGA
CACAAATGCTTTGACATGAGAGGTGAAAAGAACGgacgattttttttata
aaattttatttcaatttttttatttcgttagattttctaaaataatgtaa
atttattCAAAGATCAATGATCAATTATAAAGATTATCTTTCAAATATTA
ttccaacctcgtccccgtgtattccaggctttatttacgttactgatcgA
CGCCAGTCTAGCGCTATCAAGCATAACAAAAGCTGATAAcacacagggaa
cgaggttggaaTTATTCCTAACTCTGTTAAATAGAAAGATTTACAATAAT
ATAAATATGTTCAAAACTTGTAAACACTCACCAACTTATGAAAAGTACCA
ACGGTATCTTAAGGTTAAATACTGTAAAATGAAAGCCATTTTTAAAAACG
TGTATAGGCAGGTATAGGGTGTATTTTAAATGTTTAAGTTCGAGATTATA
ACATAATTGTTCAAAAGGAAATGTTCTAAAACAACGTACATGAAAACATT
CAGATTCCAAACCAGTCTTTCACCCatggaaaaataaacaaactttattT
CCTTAGTCCTCAAGGACATTTTTCTTCAGATTAGCCTCTGGAAAAGCTCC
ttcacccccctgtatggatataaattGAATAGACCAATGAAGTCATTATG
TTTTAGAATGAGGATATACTTTTAACTTTCAAGTTCAAAATTATAACATA
CATTTAAGGATGCAATATCAAAAACAATTTGCATGAAATCATTCCACATT
CAATTACTCCGTAACTTCAACATGTGGACTTGCAAGAGGTATCATACATT
GTCGATAGCAATTCTGATTGATATTATGTGGTTCTATGAACTGGTGACCG
CCCGCTCGTACCGCCCCATAGAAGACATGCGCCCAGGCAATGCAATCTCC
TCTTTTAATTGTATGATACCATTTGTAGTAATTGCATTTACATTTTTTGA
TCATATCTTGTAGGAACCGGTCATCGCATTGCTTCTGAGTCCAACCATGT
TCGTTCGACtgaaaggaaaaaattagaaCGAATTAATGCAATTCATAATC
TCATACCCCGAGCGAGTTACATGGATTTGTAATTTTATGCTGATAGATAC
AATCGTGAGCGCTTTCATATCAGAATCAATAAAAGCGAAATAAGGGAGTG
CTTAGTGTAATCTGTAGGGCACCTAGGACAGGTTAGGGGTTGGGGGCTAA
tattttgcaattctttggggtacttttgatggaggctctgggggctgtgt
atatttttcaaattgaatacttcaaaatatttcaattatCGGCTTGATTG
GGGTACCTAcctcaaagcaatttctcaaggggacctaacTCGTTGGGTGC
ACCATgcttcaatgggggcacctgaaaagtgggctgaaaccatgactggg
ttcgagtttgtgCAATTCACTTGTTCCGAACGAAGTCCATGAAATCAATT
CACAAATTTTGTTTGAGTgataatcaaatttcaaatcgaGGCTCACATCG
ATCGCATTTAAAAGCGCCGGAAAGAGCAATGCATCTTAGAAAATCTGTGA
ATTAGGTtactgaaagatttgaaaaagcAAGAAATACTATTGGTCGTATT
GATTTAAATAAATCCG
Run BLAST on NCBI

transcript from alignment at sc0000031:227614..238747-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003790 ID=TCONS_00003790|Name=TCONS_00003790|organism=Clytia hemisphaerica|type=transcript|length=11134bp|location=Sequence derived from alignment at sc0000031:227614..238747- (Clytia hemisphaerica)
AACAGGGGCAAAATGACGTCATGGAATAATTTCTGTTCGGTCTCTTTGAA
CGTTCGACGAGGCCCCCAGCGTGGTGGCATGATTGGGCTTTTTATGGATT
GATCTATGAGTTCAAAAAGCGTTGATATGTGATTTATTTAAGAGAATTAT
TTCGGTTCGATGGCGTGATGGCGTGATGGTGTAATCTTCGAGTTCAAAAA
GTGTTATGTCTGGTTGATAAGAGAATTATTTTGGTTTGATGGCGAATGAT
GAGAAGATATTCTTGGCGTGATAACGTGATTAGAATTTCTTTTGGATTCC
ACTGGAGGGAGGGGGCTCTTCGATGTTTTTGGATGTTGTTTGTCTAAATA
AATTGGGATCTTCTTTTAATATTGATGTTCTTTTCGAGGAAATATTTTAT
GGAATCCTGAATGTGTGGAATTTATTAAATATTTTCACTCATAATCATAC
AATTTTTGTTCCTAGGTATGAGAAGTTGACCAAACGAATTTTAGAATGGT
GGAACAAGAAAAACCCATTCCTCGTTCACAATTCATATTTCTCCAAACCC
GAATCATATTTTGCCGACAACTTCGATAAAGATCGAGTCGAAGAATTTCA
TAACGGGAATAACCCAGAAAAAATGTTTTCACCTACGGAAAGGTCCCGGA
TAGTAGCTTACATCCTGGAAAGCACGAAGTACGGTGATAATGATGATGAA
ATCGGGAAAGACGGATTATTAGAAAAAGGCGTTCTAACGGCCGCCTACCC
TATTCATGACGGCTTGCTCGAACCCAACGAAAACGAACCTTTATTAAACA
ACCGTCAAAAATTATCCCGTGAATGGGCGTCATTCGGACAAACTTTTAAA
TACCAACCCATTGAAGGTATTAAAGAATACTTCGGTGTTAAAATCGCGTT
TTATTTTGCGTGGATTGGGTTCTATACCACGTGGCTCGTTCCAGCATCCC
TGATTGGTTTAATTTTCTTCTTTTTTGGTTGTCTGTCAAACTTATGGTTT
ATACCGGTCCAAGAAATATGTAACGCCGAAAAGCCATTTTTCATGTGTCC
ATTATGCGATAAAGTTTGTTCGTACTATTTCTTACACAACACTTCATGCA
CTTACTCCAAAATGACTCACTGTTTCGATAACGACGGTACTCCCATTTTC
GCCGTATTCATTTCAATCTGGTCTGTATTTTATCTGGAATATTGGAAAAG
ACAACAGTGGAGTCTTTCTTATGAATGGCACACGATGGATTTTTGTGAAG
AAGAAGTCGTGAGACCTCAATACACAGCATCGGCCAAGAAATTTAAACAG
AACCCGATTACCCGAAAAATGGAACCGATCGCATCCAAGAAAGAACAAAT
GCTTAAAATCGCCGGTGAAGCTTCAGTCGTATTATTCTTCATCGCACTCG
TAATCGCAGCTTTAATCGGCGTTATCGTGTATCGTGCCGTCATTTTCGGG
ATCCTTATCGCAGCTGATGGTCGTTTAAGAAAAAATTCAAAACTGTTTGT
GACCGGCACAGCAGCTACGATTAATTTAATCGTCATTAACGTGTTAAAGT
TGGTTTATCGCAAATTAGCTTTGATTATGACAGAATGGGAGAACCCAAGA
ACACGAACTTCTTATGAGAAGTCCTTCACTTTGAAGATGTTCTGGTTCCA
ATTCTGTAATATGTTCTCGTCCGTTTTTTATGTTGCTTTCTTCAAAAGTG
AATTTTTCGTTGGATACCCTGGTAATTATAGGAGGTTTGGGACCAAGAGA
AGTCGCCTTGAAGGATGTTCAGAGCAAGGTTGCTTTCTTGAACTTTGTAT
ACAATTGGTCATTTTGATGGGTGGACAACAGTTGTTGGGAAATTTCGTCG
AAATATTTTGGCCGTAAGTATTGTTTATTTGTTCCATGACACATTGATTG
CGCTGTTTCATTAAAAAACCATACAGGGGGTGGACGAACCTATTCAAGTA
AAAAAAAAATTATTGAAAATGCGTGGATACGGCCTGGAAAATGTCAATAT
TAGCAAAAAATACCCTTGGAAAGATTCTTTTCATACCTTAAAGTGAGGGT
GGACGAACTAAAATCAGGCTTTTACACCCTGGAAATTTTAGAATAACTTT
TTACTCCCTAGAAAAATGAAAAACACCCCCCTGGAAATTTTTCTCGGAAT
ACCCTCTGGAAATGTTCGTCCACCCCCTGTATGGATATAAAATGGAATGG
TCCATTGTTACGACTGGTTTTTCTATACGCACTTAATAATAGAATCCCCT
CTCATTTCATAAATCCAAACTGATGTTTGATTGGAAATACTTAAAAGTTT
ACATACAGTATCCTATTTTCTGTTCTGAATTTGAAAATATTGAGGAAAAA
AATGCATCTTTATTATAAGAAGAAAGTATATAAAAAGACTTTGAGGGACA
GAACATTAAGAACAATTTGAGGCTTTGCGGACTCTAAAACAACACCAGTT
TCTTGAGAAACCGCACAAAAAATATTCAAAGATTTTTAGTAGGCTTTAAA
CTCAAAAAGGTTAAAATATCTGCGGGTTTAAAAAACTTTGGATGTTGTTA
ATTTTTTTTTGATGTTCTAAAACATTTTGAGTTTTAAAAAAGTGCATACA
CCGATAAAACTATTTTCCGGCTATTTATGTTAAATTTTTGGTGAAAATTT
GTGCTACTGAACGATAAGCATGGAGTCTGCCTTGTTACCCAATACATAGA
AGCAACTCCAATTTCCGAGTCTGAGCTTGGGGTTGCTTAGCCCGGGATCC
ACTTAGAGCTTCTTTATGGACTTTTTTGCGCTAATAAGTGGCCCGGTAGT
ATATGGTAAAATGCTTTTGCTTAGGCGGACTGTAAAACAGTCCGCCAGAT
TTTAGTTGTTTTTGGAAGGTAAAGAACAGTACGAAGCAATGTTTTTATTT
GAGAATAAGGGATTGCAAATCTGTTATTGATGTTTGTTTCTCTTTTTTGG
TTACATCTTTCAACTCCAAGTAGTTTTATTGTTATTTGGATTTTAAACAT
TTCATTTTCAAAATGGCGACCTTGCCAAATGCTCCTAGTCTACTTCACTG
GACTCAGCGTCATCAAAAATCATCAAAAAGCAAAGTTCAGCCAGAAGTAG
ACTCTAGTCTAGGGGTTGCTTAGCCCTCTAGCTCATGGTTTTTCTGGAAA
ATTTGCTTTGACAATCCCTGATGTTATGCTTCTTGTGTCAAGGGCGTTTG
CCTTACTTATGTTATCTGAAAAGCTTTTACTTTACGAGAAAGTGAAAAAA
ATGGCTAATTTCGGGGAATCGAGACTTAGCAAACTGGTTGTTTATAAAAA
AAGGTCAGGGTAAAAAAGGTGAAATATTTCCATCCGTTACTTTCAGATAT
TTACAAAAGAAGTACAACCGATGGAGAAACAACATCAAATCTGATGAAAA
CATGACCGTATGGGAAGCGGATTACCAACTAGCTGAACAAGAAGAATTAC
AATTGTTCTGGGAATATCAGGAAGTCGGTAAGTTCAGACAGTCAACTTAT
TTTCACTTAATTTACCCAAAATCCATCAGGGCTCACGCCACCGGCGGGGG
CCATGTCCTCCACTTTTTTGCGAAGTATTAATTTTTTTGGTTGCGCCTCC
TTAGACTATTCATTGCCCACCCCTCCACCCACTCAATTTCATGGCGTGGA
CCCTGTCCATCTATCTTTGTATCCTATGTTACCAGTAGAAATTAATTGTG
ATGCAATCTAAAAACGACACCATTTTCGTTATCTTATTGCATGATTTTTC
AGATAAAACAGTCTAAATTTATTTTAAAAACTCTTTTAAGTTGCATTTTG
CCCTACAATAATTTTTGTTAAGAGAGACCTCTCATCTGAGACAAAATTCT
TTCAAATGCTAACAAATGTGTCAAGGGAGTGATTTATAGTCTACTTAGAG
TGATATCCGTGCCTTGTCTTACACGTTTTTTAAAAGAAAAATTTCATAAG
AAAACGAGGCTGAAATTTGGCCAAAACCTAAGAACAAATTAAGAAGAATC
TGAACCTCAGATTTCAGAAATTACTGAAAAGTACATGTTTCCATTTTAAT
CAATATTGACATTTAAGGCTGAAAAACTCATATAAATTTAAGAACAGCCC
AGCCAGAATCATATGACTTACTCTTAGGGTATGCGGGATGTCAGTTAGCC
ATCCTCAAGGATGGCTTCCTCTGGGAAGCCTGGCGCCCTTGCCCTGCAAA
GCCATTATAGATCTATCGATCGTTTAAAAGTTTTGCTAGACAGACAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNATTGTAGTTTTACTGGATTATTTAG
GAAACTTATTTTGAATTGAAAATTTTCTAGAGACGACTTTAATCACTTCA
GTGTTGAAAATTGTCAAATGCAAAAAGCTACTTGAATATGTTTTTCTCTC
TAAAACTTGCATACAACCGAATTTTAACTGTATATAAACCGCGAATTTTA
GTATATATAACCTGTATCATATTTTAAGAATTTTANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGACATTTCAAAATGAGTA
ATCAGATCAAAATAACTCCGGAAAAGTCTTTTTGATGACGATAAAACAAT
AGAGAGACTACTTATGAATTACTGTATTCAATCGTCTGTTAAGTATACTT
TCTTCTTTTTCTAACGGGACTTTCCATTCGTCAGTTTTACAGTACGGATT
TGTGACGATGTTCGTGGCTGCATTCCCATTGGCGCCACTCATTGCTCTCA
TCACAAACTTGATCGAAATCCGCATCGATGCAACCAATATGATCAAAGCA
TACCGACGGCCGATCGCATACAAATCGGAAGGGATCGGTGTGTGGTATGA
TATACTGGTCACTTTAACGACGGTAAGTACACGTTTTTTTATAAGAACAA
ACTATATAAGAACATAAGGCTTTGATGGCCAAAATTTTAAGAACAAGTTA
AGAACATTTTAAGGCTTTGAGGACTCTAAACACCTGATTTCTTAGAAATA
CCCACAAAATGGCGAAAGTAAGAACATGTTAAGAACATTTTTAGGCTTAA
ATCTGAAAAAGTAAAGAACATCCGAAGGCTTCAAGAATTTTGGATGTTCT
TATAAAAAAGACGTGTATATGAGACGTACTGTACCGGGTGTGCCAAAAAA
AAATTACCCTTTTTGATTTGATATTGTAGTCAGTAGAAAAGAGAGTTCTC
AAAAATTGTTTCGGAAAGCCCAATTTTGGTGTTTTACTTTTTGATTTTAA
TTCATTGATTCAAAAGTTATGTCCAAAAAAACTAAAACATCAATTTTAAA
GAAATGTCAAAAAAGGCAGCGACTTCAATTTTGTTTGGGTTCAATTTTTC
TCTTCAATATGACGCTAGTACAAAATTAGTAGAGTATTTTTATGTCTCTG
CACGCTTTTGCTTGAGATGTAAATTTAGAACACCACGTAACGTAATTTCA
CATTCGTTTTAGATTGCCGTTTTGGTAAATGGTTTCGTCCTTTCGTTAAC
ATCCGAGTTCATTCCACGTTTGGTTTACAAGTACCGGTATAGTCCGGATA
TGACGTTAACCGGATATGTGGAATGGAGTTTATCTAAATTCAATATTTCC
GATTTTTCGCCAGATGAGAGTCCGTTGAATATGCCGGAAATTGAAATTCT
GCAGACGCATGTTTTTAAGAGGGTGAACAAGACAGTGTGCAGGTAACTAT
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGTAGAGATTTTTTATTTTCACAAATGTACAATGATCTAAATTTTTCAG
TTTTAAAGATTTTCATATTTTCAATATCAGATATCCTGGTTTCCACGTGA
ACAACGAATCGCACGAGTTTAGCATGGTTCATTGGTATTTAATGACAATC
AGGCTAATGTTTGCCTTCCTCTTCCAATGGATTGTATCAGCCGCTGGTCG
TATTTTAGCCTGGATCATCCCTGACCGTCCACGCTCACTAGACTTAAAAA
TTAAACGTCAAGAATTTCTGGCTAAAGAAGCATTACGTAATTATAAAATT
AAGACGGGTAAAAGAATGCCGGAAGCCGAAAATGTCTCAGAGGAGGAAGA
GGAAAGTGATACATCGGAAAGTAAACGGAACTCGGACCAAGCAAACGGAA
CAACCCCGGAAACTGGAAATCCTTCTAATAGAGACAATACGGACAACGCC
GTTGATCAAGATATCCGGATTAAAATTCCAGATCGAAGCGCTTCTACAAT
GGAAACGACTTTTTTAATTGATCCAGAGAAGAAACCAACTTCTCCGAATT
ACTCTTTCGAATATTTGACACAAATGCTTTGACATGAGAGGTGAAAAGAA
CGGACGATTTTTTTTATAAAATTTTATTTCAATTTTTTTATTTCGTTAGA
TTTTCTAAAATAATGTAAATTTATTCAAAGATCAATGATCAATTATAAAG
ATTATCTTTCAAATATTATTCCAACCTCGTCCCCGTGTATTCCAGGCTTT
ATTTACGTTACTGATCGACGCCAGTCTAGCGCTATCAAGCATAACAAAAG
CTGATAACACACAGGGAACGAGGTTGGAATTATTCCTAACTCTGTTAAAT
AGAAAGATTTACAATAATATAAATATGTTCAAAACTTGTAAACACTCACC
AACTTATGAAAAGTACCAACGGTATCTTAAGGTTAAATACTGTAAAATGA
AAGCCATTTTTAAAAACGTGTATAGGCAGGTATAGGGTGTATTTTAAATG
TTTAAGTTCGAGATTATAACATAATTGTTCAAAAGGAAATGTTCTAAAAC
AACGTACATGAAAACATTCAGATTCCAAACCAGTCTTTCACCCATGGAAA
AATAAACAAACTTTATTTCCTTAGTCCTCAAGGACATTTTTCTTCAGATT
AGCCTCTGGAAAAGCTCCTTCACCCCCCTGTATGGATATAAATTGAATAG
ACCAATGAAGTCATTATGTTTTAGAATGAGGATATACTTTTAACTTTCAA
GTTCAAAATTATAACATACATTTAAGGATGCAATATCAAAAACAATTTGC
ATGAAATCATTCCACATTCAATTACTCCGTAACTTCAACATGTGGACTTG
CAAGAGGTATCATACATTGTCGATAGCAATTCTGATTGATATTATGTGGT
TCTATGAACTGGTGACCGCCCGCTCGTACCGCCCCATAGAAGACATGCGC
CCAGGCAATGCAATCTCCTCTTTTAATTGTATGATACCATTTGTAGTAAT
TGCATTTACATTTTTTGATCATATCTTGTAGGAACCGGTCATCGCATTGC
TTCTGAGTCCAACCATGTTCGTTCGACTGAAAGGAAAAAATTAGAACGAA
TTAATGCAATTCATAATCTCATACCCCGAGCGAGTTACATGGATTTGTAA
TTTTATGCTGATAGATACAATCGTGAGCGCTTTCATATCAGAATCAATAA
AAGCGAAATAAGGGAGTGCTTAGTGTAATCTGTAGGGCACCTAGGACAGG
TTAGGGGTTGGGGGCTAATATTTTGCAATTCTTTGGGGTACTTTTGATGG
AGGCTCTGGGGGCTGTGTATATTTTTCAAATTGAATACTTCAAAATATTT
CAATTATCGGCTTGATTGGGGTACCTACCTCAAAGCAATTTCTCAAGGGG
ACCTAACTCGTTGGGTGCACCATGCTTCAATGGGGGCACCTGAAAAGTGG
GCTGAAACCATGACTGGGTTCGAGTTTGTGCAATTCACTTGTTCCGAACG
AAGTCCATGAAATCAATTCACAAATTTTGTTTGAGTGATAATCAAATTTC
AAATCGAGGCTCACATCGATCGCATTTAAAAGCGCCGGAAAGAGCAATGC
ATCTTAGAAAATCTGTGAATTAGGTTACTGAAAGATTTGAAAAAGCAAGA
AATACTATTGGTCGTATTGATTTAAATAAATCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002110XLOC_002110Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003790-exon-sc0000031-1575043694:236885..238747TCONS_00003790-exon-sc0000031-1575043694:236885..238747Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1575043694:235271..235401TCONS_00003790-exon-sc0000031-1575043694:235271..235401Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1575043694:230726..230913TCONS_00003790-exon-sc0000031-1575043694:230726..230913Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1575043694:229906..230135TCONS_00003790-exon-sc0000031-1575043694:229906..230135Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1575043694:227614..229717TCONS_00003790-exon-sc0000031-1575043694:227614..229717Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1510915933:236885..238747TCONS_00003790-exon-sc0000031-1510915933:236885..238747Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1510915933:235271..235401TCONS_00003790-exon-sc0000031-1510915933:235271..235401Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1510915933:230726..230913TCONS_00003790-exon-sc0000031-1510915933:230726..230913Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1510915933:229906..230135TCONS_00003790-exon-sc0000031-1510915933:229906..230135Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1510915933:227614..229717TCONS_00003790-exon-sc0000031-1510915933:227614..229717Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1491911889:236885..238747TCONS_00003790-exon-sc0000031-1491911889:236885..238747Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1491911889:235271..235401TCONS_00003790-exon-sc0000031-1491911889:235271..235401Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1491911889:230726..230913TCONS_00003790-exon-sc0000031-1491911889:230726..230913Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1491911889:229906..230135TCONS_00003790-exon-sc0000031-1491911889:229906..230135Clytia hemisphaericaexon
TCONS_00003790-exon-sc0000031-1491911889:227614..229717TCONS_00003790-exon-sc0000031-1491911889:227614..229717Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:227614..238747 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.65459	4.36977	1.69249	1.0329	0.671394	0.420513	1.26654	0.71659	2.86772	2.17419	1.67691	3.02543	2.95069	2.40685	1.58066	1.61335	1.6629	2.45056	3.94886	4.16195	3.46431	2.65371	12.1907	8.60683	2.84527	3.45523	1.15752	1.41221	8.28213	9.21274
Blast
[Close]
BLAST of TCONS_00003790 vs. Swiss-Prot (Human)
Match: ANO4 (Anoctamin-4 OS=Homo sapiens GN=ANO4 PE=2 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 1.164e-133
Identity = 283/750 (37.73%), Postives = 429/750 (57.20%), Query Frame = 2 
Query:  455 FVPRYEKLTKRILEWWNKKN--------PFLVHNSYFSKPESYFADNFDKDRVEEFHNGNNPEKMFSPTERSRIVAYILESTKYGDNDDEIGKDGLLEKGVLTAAYPIHDGXXXXXXXXXXXXX---RQKLSREWASFGQTFKYQPIEGIKEYFGVKIAFYFAWIGFYTTWLVPASXXXXXXXXXXCLSNLWFIPVQEICNAEKPFFMCPLCDKVCSYYFLHNTSCTYSKMTHCFDNDGTPIFAVFISIWSVFYLEYWKRQQWSLSYEWHTMDFCEEEV-VRPQYTAS-AKKFKQNPITRKMEPIASKKEQMLKIAGEASXXXXXXXXXXXXXXGVIVYRAVIFGILIAAD-GRLRKNSKLFVTGTAATINLIVINVLKLVYRKLALIMTEWENPRTRTSYEKSFTLKMFWFQFCNMFSSVFYVAFFKSEFFVGYPGNYRRFGTKRSRLEGCSEQGCFLELCIQLVILMGGQQLLGNFVEIFWPYLQ----KKYNRWRNNIKSDENMTVWEADYQLAEQEELQLFWEYQEVVLQYGFVTMFVXXXXXXXXXXXXTNLIEIRIDATNMIKAYRRPIAYKSEGIGVWYDILVTLTTIAVLVNGFVLSLTSEFIPRLVYKYRYSP--------DMTLTGYVEWSLSKFNISDFSPDESPLNMPEIEILQTHVFKRVNKTVCRYPGFHVNNES---HEFSMVHWYLMTIRLMFAFLFQWIVSAAGRILAWIIPDRPRSLDLKIKRQEFLAKEAL 2617
            F+ R +K   R   W  KK         P L  N  ++ P       F + R+  F   +N E  F+   RSRIV +IL+  KY +  ++IG + LL  G   AA+P+H+G      +         R  L   WAS+G  +KYQP++ ++ YFG KI  YFAW+G+YT  L PA+ IGL  F +G  +       +E+C A     MCP+CDK C +  L + SC Y+K+TH FDN  T  FAVF+++W+  +LE+WKR++  ++Y+W  +D+ EEE  +RPQ+ A  +KK + NPI+ K EP  +  ++  ++   AS + F I +VIAA+ G+++YR V      A     +R NS++  TGTA  IN  +I +L ++Y K+AL++T  E PRT + +E SFTLKMF FQF N+ SS FY+AFF   F  G+PG Y R    R RLE C   GC ++LC+Q+ I+M  +Q   NF+E+ +P +Q    ++  R  +  +   +   WE DY L       LF EY E++LQ+GF T+FVAAFPLAPL+AL+ N+IEIR+DA   +  +RRP+A +++ IG+WY IL  +  ++V+ N FV+++TS+FIPRLVY Y+Y P           + GYV  SLS F ISDF     P +           F       CRY  +     S   + +++  W+++  RL F  +F+ +V     +++++IPD P+ L  +++R+++L +E +
Sbjct:  198 FMSRIDKQISRFRRWLPKKPMRLDKETLPDLEENDCYTAP-------FSQQRIHHFII-HNKETFFNNATRSRIVHHILQRIKYEEGKNKIGLNRLLTNGSYEAAFPLHEGSYRSKNSIRTHGAENHRHLLYECWASWGVWYKYQPLDLVRRYFGEKIGLYFAWLGWYTGMLFPAAFIGLFVFLYGVTTLDHSQVSKEVCQATD-IIMCPVCDKYCPFMRLSD-SCVYAKVTHLFDNGATVFFAVFMAVWATVFLEFWKRRRAVIAYDWDLIDWEEEEEEIRPQFEAKYSKKERMNPISGKPEPYQAFTDKCSRLIVSASGIFFMICVVIAAVFGIVIYRVVTVSTFAAFKWALIRNNSQVATTGTAVCINFCIIMLLNVLYEKVALLLTNLEQPRTESEWENSFTLKMFLFQFVNLNSSTFYIAFFLGRF-TGHPGAYLRL-INRWRLEECHPSGCLIDLCMQMGIIMVLKQTWNNFMELGYPLIQNWWTRRKVRQEHGPERKISFPQWEKDYNLQPMNAYGLFDEYLEMILQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLASRAKDIGIWYGILEGIGILSVITNAFVIAITSDFIPRLVYAYKYGPCAGQGEAGQKCMVGYVNASLSVFRISDFENRSEPES-------DGSEFSGTPLKYCRYRDYRDPPHSLVPYGYTLQFWHVLAARLAFIIVFEHLVFCIKHLISYLIPDLPKDLRDRMRREKYLIQEMM 928
The following BLAST results are available for this feature:
BLAST of TCONS_00003790 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANO41.164e-13337.73Anoctamin-4 OS=Homo sapiens GN=ANO4 PE=2 SV=1[more]
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