TCONS_00003765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003765
Unique NameTCONS_00003765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1034

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003765 ID=TCONS_00003765|Name=TCONS_00003765|organism=Clytia hemisphaerica|type=transcript|length=1034bp
aaaagaagaaaaatggtCGGGCGAAATAGAAGATTTTGGTTAAAGATTGG
GTTGATCATTACTTGTTTATTGGTTCGCGTCAGTGCTGGGAACGTACGAT
GTATTATGCGGCCCGGAAAAATTGTTGGCGGAGGCGTCGACCGATGTTGC
TATACACCCGCCACCTGTATCAAGACCTGCCGTAGTGATATATCGGAAAA
GAACTTTATCGCAGTTCATTTTATACCTAATCGATGCTATTGCAAGTCAT
CCGTCACAATGATTGTAGCAAATACCACTGTGGGAGAAACATATTGTGTT
TTTTCAACTAACAATCAAGTTTTCTCTGTAACACCCGTTAAAGCCGTTCC
CGGTCAAAAGAATGTGCAAGAAGGGAGTGAGAAAGACATTACATTCCACG
TGTCACTTTTCCACCTGCACATAGATAGCGATAAGAGGATAAGAAATACG
CTTTCTTCAGATAAAgatcaaaatggcagaaaagGACATTCGCTGCACAC
AGAATTCACATTTGCCGACATCTCTGGGAGAAATAAAGACAGTCCTCAAA
GAAATTATGATAAAGATGCAGTTGCAGGATACCTCTACCAATTTGTTGGA
TTTCCAGATACCGCTTTCCCTTTACCATTCAATGGTGCCATCCTGAAAGC
AGAATCAGAAATTAATtGGAATGGCTTCAATACAAGTCTAACGGAACAAG
AAAGTTGGTTGACGTACCACGTCTCTCCAACGTACACCGGTGTTCATACT
TTGGTCCGCATACGGTACAATACCATAAGACGCGGAACTCAAGCAGTACT
TGTGGTGTTTTGGGACGAAATCGAGTTCAGCTGTCACATAGGGATGTCTA
CGTGGAGCATGGCCTTCAGAATGAAAGCCTCCTCTTGGAAACAAACAGCG
AAAGATGTCAATATTCGTTTTTATATCGCCAAACTCAATTTTAAAGCATT
TTCCTATCTCGTTACTTTTAAGTATACGTCATCACAACAATTGGACAATG
GTGATTGGCTGTTCAAGGTAttgtttaacaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00003765-protein

>TCONS_00003765-protein ID=TCONS_00003765-protein|Name=TCONS_00003765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
KRRKMVGRNRRFWLKIGLIITCLLVRVSAGNVRCIMRPGKIVGGGVDRCC
YTPATCIKTCRSDISEKNFIAVHFIPNRCYCKSSVTMIVANTTVGETYCV
FSTNNQVFSVTPVKAVPGQKNVQEGSEKDITFHVSLFHLHIDSDKRIRNT
LSSDKDQNGRKGHSLHTEFTFADISGRNKDSPQRNYDKDAVAGYLYQFVG
FPDTAFPLPFNGAILKAESEINWNGFNTSLTEQESWLTYHVSPTYTGVHT
LVRIRYNTIRRGTQAVLVVFWDEIEFSCHIGMSTWSMAFRMKASSWKQTA
KDVNIRFYIAKLNFKAFSYLVTFKYTSSQQLDNGDWLFKVLFNK
Run BLAST on NCBI

transcript from alignment at sc0000031:821071..827809+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003765 ID=TCONS_00003765|Name=TCONS_00003765|organism=Clytia hemisphaerica|type=transcript|length=6739bp|location=Sequence derived from alignment at sc0000031:821071..827809+ (Clytia hemisphaerica)
aaaagaagaaaaatggtCGGGCGAAATAGAAGATTTTGGTTAAAGATTGC
AAGTTTATTTTATACTAAGTTCCAATCTCTTGATATTTTACTTTTGATGC
TTTGTCCATTCATGTCTGTGTCTCTAATACAGGGTTTTTCATAGCTTATT
TATCAACCTTGGAATAAATAGGTTCTATTTGAGTATTCGTGGTTTTTATT
ATGcaaattgaaaaatgttgcgatctgattggtttaaatttttcttataa
aataaaaaggttCTATCATAAACTTGTGTCtgcattttgattggcttagc
AGGAGATAGAACCTTTTTGTTCCAAGCAATATTCCCAATTTTTCTTCCAG
ATAGAAccttattattttgaaaatttcatcttttcGATTTGTTTTCATTA
ATTAGTACAGTGGATGACAAATTCACCCCGTCAAACTCCTTACcaactac
tcttgtctcccgaatagacgggggggggtctgaataagcaggggggtagg
aaaatttcctaaattctaataagcgggggNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcatggttacttttgt
cttcgctgattgcgcgatgaatagaatctcgattcgtcggcacagcgtaa
atatatgattttgagctgtgcttttcacggtaggaCCTACCTACAATGta
agaaaattgaattattcgaatttaattagcagggggccttaataagagcg
gggggatgggatttttttctcttaacaattagcagGGGGGCGTCTATTTG
GGAGACAAGAGTACGCGTATTGATGTATACTTCCTTAGGCCAATGTATCT
TTTTAATTGTCTTGAAGCGATAAAAGTCAACGTTCACCCGCCAAATTTGA
AACACcaaatttatattcatttaactTTATATAATGATAGTTGAagcagt
aaattttttttttaattttataaatttcttttgcAGGGGTTGATCATTAC
TTGTTTATTGGTTCGCGTCAGTGCTGGGAACGGTAAGTCCTTTCAAACTC
GTTCCCACTCCCTTAGTTCTGCTTCTTCACAACGCCTTGTGAAAGTATAT
CCAACTTTTGGATTCAAATCTCTGCTCTAATTTGAAATACACaacaataa
aaatgtttttttaaatcaatcaaatcGATGTAAATATTTATTACTAATTC
GCTGAATTAACTCcagaaaattttatgttttttgggaACGTAAAAtaatc
ctaccaaaatcgataCAATTCGATTATTCTTCGTCTTTCTATAGTACGAT
GTATTATGCGGCCCGGAAAAATTGTTGGCGGAGGCGTCGACCGATGTTGC
TATACACCCGCCACCTGTATCAAGACCTGCCGTAGTGATATATCGGAAAA
GAACTTTATCGCAGTTCATTTTATACCTAATCGATGCTATTGCAAGTCAT
CCGTCACAATGATTGTAGCAAATACCACTGTGGGAGAAACATATTGTGTT
TTTTCAACTAACAATCAAGGTACGCGGTTCTTTATtataacatttttgaa
gcctttgatgttcttaatcttaaaagaaaatgttctaagcatgtttttat
tttcactattttgcgagtatttttgaccattttataagaaatcaggtgtt
ttaaagtccgggaagccttcaaatgttcttaacttgttcttaacattttg
gccattgaaccctttatgttcttatatagtttgctcttataaaaaacgtg
gtGTATGTTATTATTTTAAGTTTAACTGTAGGTTTAGCAAAGAGTTAGAC
TGCACGCATCTcctttgatatgttttgatatagaggatgcgtatcgtgta
taaaaccCCCGTCCGAGAGTTATTCCCGTCTttgttttttgagttttagc
aACTTGAGTAGCTTGATtatagcatagtataagaaagccgcggctggaat
atgtacagcattgtcttttcagttaattgctgttccatctctgtctccga
gctttataagaacaNctttcctttacaatgatttgaTAATGCAATTGTAT
TATCAAGggtatatcattaatgtctaaaacacaCTGAGAattaagtatta
acgacaaaccaatgaAATTTACCGTTAAAGATGCAACATTACTGATCTCT
TGATaaaaaatagtcatcaaatacgacagagatagaacaacagaagttca
gatgttatcattccagccacggatttcttatactatgattatAGTAAGAG
ATATCTTCaagtttcattaaatttgaatttttaaattttgaatagTTGGA
AGTTAATACAATTATTGGATTACTaaatctttttaagaaaattgaaacag
gttaccccaaattttGGGGTAACTCTGGGACGGGGATTATATAAACGATG
AGCATCCACTgtatcaaaatatatcaaagGGGTCTAGCCTcaattaagaa
caatagaatgctaagcataatgcgagcctgatatacatgttttttcttat
ataagCATAACCTTCATAAGTATATGCAGGCTCAGtctttggtacctaaa
caatggctctattgtttgaatacaatagaatgctaagtaTAATGCGAGCA
TGATATAGGGGAGACACTTACTAGTGGGGGCGTACGTACGgagtttgcga
tttccgaaataccgatagtagttttgccaaaatttccgaaattccgtaaa
aaaatacttgcaattccgatatcgatttttttgggtatttttcctcgttt
tgactaatttttcatcaaatttgatttttcatgtatgagttccgaaaaag
ggggatagaaactttataataccgaaatttcgaagcaaaatttcatgaat
ttccaataccgaaacaatttcagaattccgaaacaccgaaggaattttgc
ccgatttccaaAATCccgaagaaaaaagatttccacaattccgaaatacc
gtaagTCCCCCTTACTACTGAAGCAACATATAAAAGTTTTCAGtgatttg
tttttcatttcttgtTTTAGTTTTCTCTGTAACACCCGTTAAAGCCGTTC
CCGGTCAAAAGAATGTGCAAGAAGGGAGTGAGAAAGACATTACATTCCAC
GTGTCACTTTTCCACCTGCACATAGATAGCGATAAGAGGATAAGAAATAC
GCTTTCTTCAGATAAAgatcaaaatggcagaaaagGTAATCCATGCATGC
TTGTACCCAGTACTTTAGGCTTtcttttatgattctgatacaCGTTGAAG
TCTTCGGTGTTCTTAAGTTAACttaattttagtgaaaattctcgacaaag
aaattttttggTCAAATCTTCCATAATTTGATCActcttttcaaattatt
tattttttgttatggGAACTATATACCACGCATGTCGTCACTTGAAGTAC
TTTTTCAGGAAAGTGacatcaaaaatcttgattAAAAACGATTTTGGAAG
ACTTCCAATTGGATATAGTTGaattaactcgagaaaatctaGGTCAAAGA
TGTCAGAACGTAGCgagtacctcaccaaaaactGGGAATTTTCATCCCCG
TTTTgattagcctatactagacgtcacccggtTTTTTTAACTTCCCACCC
AGTATAGGCTAGTCAAAACTGGACTTTTTTGTGATATTTGACGCGTCAAA
AAGAGTTCAGAATTGACGTCTTTCTTGTTTGATAGGTTAACCTTTTACGG
TGgcaaaaaatctattttcttgTTTGCAATAGGACATTCGCTGCACACAG
AATTCACATTTGCCGACATCTCTGGGAGAAATAAAGACAGTCCTCAAAGA
AATTATGATAAAGATGCAGTTGCAGGATACCTCTACCAATTTGTTGGATT
TCCAGATACCGCTTTCCCTTTACCATTCAATGGTGCCATCCTGAAAGCAG
AATCAGAAATTAATGTAAGGATATAgtttttccaacttttttttgaaaag
aaccagttaattttggctttgaggttcacctcttttatattttcgtgatt
ttcaggcttgaatattcttaaaatattcttaaaattctACGCAGCTAATA
GACTGGGAGcatttgactgcttttacgtcacttccaaccaatgagctatt
gggtggaacggaagacattgcagtggtgcatatcatgaatagcgctctct
ctaacttaggttggaagggtagaattttaactttgagttttaatataaaa
cttaggaccttaggatctgaggatccaaaagttcaaaaatggtccaataa
ggctcataaaATAGGCTGGAAgtctattataaaaaaaaatttaagcgGAC
CCTTGGCTATGAAACTGAAAAAGCCTGATGGTGAAACGATCGTTCTAACT
TTTACGATAGTAGTGAATTCATAAATAAAACCGGGTGTAAAAAACGTCCA
ATGCGGCTGAAACAAAAACGAGTTTTAAGACAGTTCTTCTGCTCGAATCT
TTAACCAGTTCTTCTGCTCGAATCTTTAACCAGTTCTTCTCCcgattttt
gcaattttccaagaaaatgtggaatttttcctccaaaattgaccaatttt
gtgccaattttaccaaaatattggccttttatcacaatttcctaccctta
cagtgcatttcagtgcagttttgtaatttcctacccttacagtgcatttc
agTGCAGTTtcgtaatttcctacccttacagggcactagctgaactatga
aaaacctacccttaagggccgaacgtctggtaggtcatttgccttgagtg
ccccccccctggggTTCTTCTACTCGAATCTTTAACCAGTTCTTCTGCTT
GAATCTTTAACCATTTTTTGTGCTCGAATCTTCAACCAGTTCTTCTGCTC
GAATCTTTAACCAGTTCTTCTGCTTGGGTTATTGACACTTCTGCATCTAC
CTTCTTTGATTTTAGAtttcaaactaaatttttctccattttttctctat
tttttcaacttttttcacagtGGAATGGCTTCAATACAAGTCTAACGGAA
CAAGAAAGTTGGTTGACGTACCACGTCTCTCCAACGTACACCGGTGTTCA
TACTTTGGTCCGCATACGGTACAATACCATAAGACGCGGAACTCAAGCAG
TACTTGTGGTGTTTTGGGACGAAATCGAGTTCAGCTGTCACATAGGGTAT
GTTGATCAAAATCTCCGTTTAAAATCTCCATAAATCACTTTCAGATTTAC
AATagagagcaagtacgtcggaaacaagCAAaagagtgcaacgctcgtta
aaagacaatgaaattacaattagaaatctcttcctctgataagttcgaca
tggtctaaaaccgcctgtGTAAATCGAACATTATGGAGAATTCGATTTAT
AGAAACAAAAAACAGCTTCCCTTTAAGAAACCTGAAAGACCGTTCGAGTA
GGCATATTCtgctattttcaaaaatttgcggTAGCTTCGATCCAGCTTTT
GCATTAACCATTCTCACAACAATGAAACATCAACCTTAGATCAGCAatac
tgtgaaaaaaattctaaagaaTATTGTTTTCATTAAAAGATATTATAAAC
AAAGTGTTCAACTGATTGACCCCTATAATGCGtgtttttgaagttttcaa
GCAGAGACAAACTTTGTTATGGCTAAAACTAAAAACACTGCACACCTTTT
TGAAACCGACTTTAGAATTCAAAGACAAACATACATTTGATTTTTAGGAT
GTCTACGTGGAGCATGGCCTTCAGAATGAAAGCCTCCTCTTGGAAACAAA
CAGCGAAAGATGTCAATATTCGTTTTTATATCGCCAAACTCAATTTTAAA
GCATTTTCCTATCTCGTTACTTTTAAGTATACGTCATCACAACAATTGGA
CAATGGTGATTGGCTGTTCAAGGTAttgtttaacaaaaa

Coding sequence (CDS) from alignment at sc0000031:821071..827809+

>TCONS_00003765 ID=TCONS_00003765|Name=TCONS_00003765|organism=Clytia hemisphaerica|type=CDS|length=7224bp|location=Sequence derived from alignment at sc0000031:821071..827809+ (Clytia hemisphaerica)
aaaagaagaaaaatggtCGGGCGAAATAGAAGATTTTGGTTAAAGATTGG
GTTGATCATTACTTGTTTATTGGTTCGCGTCAGTGCTGGGAACGTACGAT
GTATTATGCGGCCCGGAAAAATTGTTGGCGGAGGCGTCGACCGATGTTGC
TATACACCCGCCACCTGTATCAAGACCTGCCGTAGTGATATATCGGAAAA
GAACTTTATCGCAGTTCATTTTATACCTAATCGATGCTATTGCAAGTCAT
CCGTCACAATGATTGTAGCAAATACCACTGTGGGAGAAACATATTGTGTT
TTTTCAACTAACAATCAAGTTTTCTCTGTAACACCCGTTAAAGCCGTTCC
CGGTCAAAAGAATGTGCAAGAAGGGAGTGAGAAAGACATTACATTCCACG
TGTCACTTTTCCACCTGCACATAGATAGCGATAAGAGGATAAGAAATACG
CTTTCTTCAGATAAAgatcaaaatggcagaaaagGACATTCGCTGCACAC
AGAATTCACATTTGCCGACATCTCTGGGAGAAATAAAGACAGTCCTCAAA
GAAATTATGATAAAGATGCAGTTGCAGGATACCTCTACCAATTTGTTGGA
TTTCCAGATACCGCTTTCCCTTTACCATTCAATGGTGCCATCCTGAAAGC
AGAATCAGAAATTAATtGGAATGGCTTCAATACAAGTCTAACGGAACAAG
AAAGTTGGTTGACGTACCACGTCTCTCCAACGTACACCGGTGTTCATACT
TTGGTCCGCATACGGTACAATACCATAAGACGCGGAACTCAAGCAGTACT
TGTGGTGTTTTGGGACGAAATCGAGTTCAGCTGTCACATAGGGATGTCTA
CGTGGAGCATGGCCTTCAGAATGAAAGCCTCCTCTTGGAAACAAACAGCG
AAAGATGTCAATATTCGTTTTTATATCGCCAAACTCAATTTTAAAGCATT
TTCCTATCTCGTTACTTTTAAGTATACGTCATCACAACAATTGGACAATG
GTGATTGGCTGTTCAAGGTAttgtttaacaaaaaaagaagaaaaatggtC
GGGCGAAATAGAAGATTTTGGTTAAAGATTGGGTTGATCATTACTTGTTT
ATTGGTTCGCGTCAGTGCTGGGAACGTACGATGTATTATGCGGCCCGGAA
AAATTGTTGGCGGAGGCGTCGACCGATGTTGCTATACACCCGCCACCTGT
ATCAAGACCTGCCGTAGTGATATATCGGAAAAGAACTTTATCGCAGTTCA
TTTTATACCTAATCGATGCTATTGCAAGTCATCCGTCACAATGATTGTAG
CAAATACCACTGTGGGAGAAACATATTGTGTTTTTTCAACTAACAATCAA
GTTTTCTCTGTAACACCCGTTAAAGCCGTTCCCGGTCAAAAGAATGTGCA
AGAAGGGAGTGAGAAAGACATTACATTCCACGTGTCACTTTTCCACCTGC
ACATAGATAGCGATAAGAGGATAAGAAATACGCTTTCTTCAGATAAAgat
caaaatggcagaaaagGACATTCGCTGCACACAGAATTCACATTTGCCGA
CATCTCTGGGAGAAATAAAGACAGTCCTCAAAGAAATTATGATAAAGATG
CAGTTGCAGGATACCTCTACCAATTTGTTGGATTTCCAGATACCGCTTTC
CCTTTACCATTCAATGGTGCCATCCTGAAAGCAGAATCAGAAATTAATtG
GAATGGCTTCAATACAAGTCTAACGGAACAAGAAAGTTGGTTGACGTACC
ACGTCTCTCCAACGTACACCGGTGTTCATACTTTGGTCCGCATACGGTAC
AATACCATAAGACGCGGAACTCAAGCAGTACTTGTGGTGTTTTGGGACGA
AATCGAGTTCAGCTGTCACATAGGGATGTCTACGTGGAGCATGGCCTTCA
GAATGAAAGCCTCCTCTTGGAAACAAACAGCGAAAGATGTCAATATTCGT
TTTTATATCGCCAAACTCAATTTTAAAGCATTTTCCTATCTCGTTACTTT
TAAGTATACGTCATCACAACAATTGGACAATGGTGATTGGCTGTTCAAGG
TAttgtttaacaaaaaaagaagaaaaatggtCGGGCGAAATAGAAGATTT
TGGTTAAAGATTGGGTTGATCATTACTTGTTTATTGGTTCGCGTCAGTGC
TGGGAACGTACGATGTATTATGCGGCCCGGAAAAATTGTTGGCGGAGGCG
TCGACCGATGTTGCTATACACCCGCCACCTGTATCAAGACCTGCCGTAGT
GATATATCGGAAAAGAACTTTATCGCAGTTCATTTTATACCTAATCGATG
CTATTGCAAGTCATCCGTCACAATGATTGTAGCAAATACCACTGTGGGAG
AAACATATTGTGTTTTTTCAACTAACAATCAAGTTTTCTCTGTAACACCC
GTTAAAGCCGTTCCCGGTCAAAAGAATGTGCAAGAAGGGAGTGAGAAAGA
CATTACATTCCACGTGTCACTTTTCCACCTGCACATAGATAGCGATAAGA
GGATAAGAAATACGCTTTCTTCAGATAAAgatcaaaatggcagaaaagGA
CATTCGCTGCACACAGAATTCACATTTGCCGACATCTCTGGGAGAAATAA
AGACAGTCCTCAAAGAAATTATGATAAAGATGCAGTTGCAGGATACCTCT
ACCAATTTGTTGGATTTCCAGATACCGCTTTCCCTTTACCATTCAATGGT
GCCATCCTGAAAGCAGAATCAGAAATTAATtGGAATGGCTTCAATACAAG
TCTAACGGAACAAGAAAGTTGGTTGACGTACCACGTCTCTCCAACGTACA
CCGGTGTTCATACTTTGGTCCGCATACGGTACAATACCATAAGACGCGGA
ACTCAAGCAGTACTTGTGGTGTTTTGGGACGAAATCGAGTTCAGCTGTCA
CATAGGGATGTCTACGTGGAGCATGGCCTTCAGAATGAAAGCCTCCTCTT
GGAAACAAACAGCGAAAGATGTCAATATTCGTTTTTATATCGCCAAACTC
AATTTTAAAGCATTTTCCTATCTCGTTACTTTTAAGTATACGTCATCACA
ACAATTGGACAATGGTGATTGGCTGTTCAAGGTAttgtttaacaaaaaaa
gaagaaaaatggtCGGGCGAAATAGAAGATTTTGGTTAAAGATTGGGTTG
ATCATTACTTGTTTATTGGTTCGCGTCAGTGCTGGGAACGTACGATGTAT
TATGCGGCCCGGAAAAATTGTTGGCGGAGGCGTCGACCGATGTTGCTATA
CACCCGCCACCTGTATCAAGACCTGCCGTAGTGATATATCGGAAAAGAAC
TTTATCGCAGTTCATTTTATACCTAATCGATGCTATTGCAAGTCATCCGT
CACAATGATTGTAGCAAATACCACTGTGGGAGAAACATATTGTGTTTTTT
CAACTAACAATCAAGTTTTCTCTGTAACACCCGTTAAAGCCGTTCCCGGT
CAAAAGAATGTGCAAGAAGGGAGTGAGAAAGACATTACATTCCACGTGTC
ACTTTTCCACCTGCACATAGATAGCGATAAGAGGATAAGAAATACGCTTT
CTTCAGATAAAgatcaaaatggcagaaaagGACATTCGCTGCACACAGAA
TTCACATTTGCCGACATCTCTGGGAGAAATAAAGACAGTCCTCAAAGAAA
TTATGATAAAGATGCAGTTGCAGGATACCTCTACCAATTTGTTGGATTTC
CAGATACCGCTTTCCCTTTACCATTCAATGGTGCCATCCTGAAAGCAGAA
TCAGAAATTAATtGGAATGGCTTCAATACAAGTCTAACGGAACAAGAAAG
TTGGTTGACGTACCACGTCTCTCCAACGTACACCGGTGTTCATACTTTGG
TCCGCATACGGTACAATACCATAAGACGCGGAACTCAAGCAGTACTTGTG
GTGTTTTGGGACGAAATCGAGTTCAGCTGTCACATAGGGATGTCTACGTG
GAGCATGGCCTTCAGAATGAAAGCCTCCTCTTGGAAACAAACAGCGAAAG
ATGTCAATATTCGTTTTTATATCGCCAAACTCAATTTTAAAGCATTTTCC
TATCTCGTTACTTTTAAGTATACGTCATCACAACAATTGGACAATGGTGA
TTGGCTGTTCAAGGTAttgtttaacaaaaaaagaagaaaaatggtCGGGC
GAAATAGAAGATTTTGGTTAAAGATTGGGTTGATCATTACTTGTTTATTG
GTTCGCGTCAGTGCTGGGAACGTACGATGTATTATGCGGCCCGGAAAAAT
TGTTGGCGGAGGCGTCGACCGATGTTGCTATACACCCGCCACCTGTATCA
AGACCTGCCGTAGTGATATATCGGAAAAGAACTTTATCGCAGTTCATTTT
ATACCTAATCGATGCTATTGCAAGTCATCCGTCACAATGATTGTAGCAAA
TACCACTGTGGGAGAAACATATTGTGTTTTTTCAACTAACAATCAAGTTT
TCTCTGTAACACCCGTTAAAGCCGTTCCCGGTCAAAAGAATGTGCAAGAA
GGGAGTGAGAAAGACATTACATTCCACGTGTCACTTTTCCACCTGCACAT
AGATAGCGATAAGAGGATAAGAAATACGCTTTCTTCAGATAAAgatcaaa
atggcagaaaagGACATTCGCTGCACACAGAATTCACATTTGCCGACATC
TCTGGGAGAAATAAAGACAGTCCTCAAAGAAATTATGATAAAGATGCAGT
TGCAGGATACCTCTACCAATTTGTTGGATTTCCAGATACCGCTTTCCCTT
TACCATTCAATGGTGCCATCCTGAAAGCAGAATCAGAAATTAATtGGAAT
GGCTTCAATACAAGTCTAACGGAACAAGAAAGTTGGTTGACGTACCACGT
CTCTCCAACGTACACCGGTGTTCATACTTTGGTCCGCATACGGTACAATA
CCATAAGACGCGGAACTCAAGCAGTACTTGTGGTGTTTTGGGACGAAATC
GAGTTCAGCTGTCACATAGGGATGTCTACGTGGAGCATGGCCTTCAGAAT
GAAAGCCTCCTCTTGGAAACAAACAGCGAAAGATGTCAATATTCGTTTTT
ATATCGCCAAACTCAATTTTAAAGCATTTTCCTATCTCGTTACTTTTAAG
TATACGTCATCACAACAATTGGACAATGGTGATTGGCTGTTCAAGGTAtt
gtttaacaaaaaaagaagaaaaatggtCGGGCGAAATAGAAGATTTTGGT
TAAAGATTGGGTTGATCATTACTTGTTTATTGGTTCGCGTCAGTGCTGGG
AACGTACGATGTATTATGCGGCCCGGAAAAATTGTTGGCGGAGGCGTCGA
CCGATGTTGCTATACACCCGCCACCTGTATCAAGACCTGCCGTAGTGATA
TATCGGAAAAGAACTTTATCGCAGTTCATTTTATACCTAATCGATGCTAT
TGCAAGTCATCCGTCACAATGATTGTAGCAAATACCACTGTGGGAGAAAC
ATATTGTGTTTTTTCAACTAACAATCAAGTTTTCTCTGTAACACCCGTTA
AAGCCGTTCCCGGTCAAAAGAATGTGCAAGAAGGGAGTGAGAAAGACATT
ACATTCCACGTGTCACTTTTCCACCTGCACATAGATAGCGATAAGAGGAT
AAGAAATACGCTTTCTTCAGATAAAgatcaaaatggcagaaaagGACATT
CGCTGCACACAGAATTCACATTTGCCGACATCTCTGGGAGAAATAAAGAC
AGTCCTCAAAGAAATTATGATAAAGATGCAGTTGCAGGATACCTCTACCA
ATTTGTTGGATTTCCAGATACCGCTTTCCCTTTACCATTCAATGGTGCCA
TCCTGAAAGCAGAATCAGAAATTAATtGGAATGGCTTCAATACAAGTCTA
ACGGAACAAGAAAGTTGGTTGACGTACCACGTCTCTCCAACGTACACCGG
TGTTCATACTTTGGTCCGCATACGGTACAATACCATAAGACGCGGAACTC
AAGCAGTACTTGTGGTGTTTTGGGACGAAATCGAGTTCAGCTGTCACATA
GGGATGTCTACGTGGAGCATGGCCTTCAGAATGAAAGCCTCCTCTTGGAA
ACAAACAGCGAAAGATGTCAATATTCGTTTTTATATCGCCAAACTCAATT
TTAAAGCATTTTCCTATCTCGTTACTTTTAAGTATACGTCATCACAACAA
TTGGACAATGGTGATTGGCTGTTCAAGGTAttgtttaacaaaaaaagaag
aaaaatggtCGGGCGAAATAGAAGATTTTGGTTAAAGATTGGGTTGATCA
TTACTTGTTTATTGGTTCGCGTCAGTGCTGGGAACGTACGATGTATTATG
CGGCCCGGAAAAATTGTTGGCGGAGGCGTCGACCGATGTTGCTATACACC
CGCCACCTGTATCAAGACCTGCCGTAGTGATATATCGGAAAAGAACTTTA
TCGCAGTTCATTTTATACCTAATCGATGCTATTGCAAGTCATCCGTCACA
ATGATTGTAGCAAATACCACTGTGGGAGAAACATATTGTGTTTTTTCAAC
TAACAATCAAGTTTTCTCTGTAACACCCGTTAAAGCCGTTCCCGGTCAAA
AGAATGTGCAAGAAGGGAGTGAGAAAGACATTACATTCCACGTGTCACTT
TTCCACCTGCACATAGATAGCGATAAGAGGATAAGAAATACGCTTTCTTC
AGATAAAgatcaaaatggcagaaaagGACATTCGCTGCACACAGAATTCA
CATTTGCCGACATCTCTGGGAGAAATAAAGACAGTCCTCAAAGAAATTAT
GATAAAGATGCAGTTGCAGGATACCTCTACCAATTTGTTGGATTTCCAGA
TACCGCTTTCCCTTTACCATTCAATGGTGCCATCCTGAAAGCAGAATCAG
AAATTAATtGGAATGGCTTCAATACAAGTCTAACGGAACAAGAAAGTTGG
TTGACGTACCACGTCTCTCCAACGTACACCGGTGTTCATACTTTGGTCCG
CATACGGTACAATACCATAAGACGCGGAACTCAAGCAGTACTTGTGGTGT
TTTGGGACGAAATCGAGTTCAGCTGTCACATAGGGATGTCTACGTGGAGC
ATGGCCTTCAGAATGAAAGCCTCCTCTTGGAAACAAACAGCGAAAGATGT
CAATATTCGTTTTTATATCGCCAAACTCAATTTTAAAGCATTTTCCTATC
TCGTTACTTTTAAGTATACGTCATCACAACAATTGGACAATGGTGATTGG
CTGTTCAAGGTAttgtttaacaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002099XLOC_002099Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003765-exon-sc0000031-1491911889:821071..821118TCONS_00003765-exon-sc0000031-1491911889:821071..821118Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:821071..821118TCONS_00003765-exon-sc0000031-1510915933:821071..821118Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:821071..821118TCONS_00003765-exon-sc0000031-1575043694:821071..821118Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:822907..822952TCONS_00003765-exon-sc0000031-1491911889:822907..822952Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:822907..822952TCONS_00003765-exon-sc0000031-1510915933:822907..822952Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:822907..822952TCONS_00003765-exon-sc0000031-1575043694:822907..822952Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:823215..823439TCONS_00003765-exon-sc0000031-1491911889:823215..823439Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:823215..823439TCONS_00003765-exon-sc0000031-1510915933:823215..823439Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:823215..823439TCONS_00003765-exon-sc0000031-1575043694:823215..823439Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:824941..825105TCONS_00003765-exon-sc0000031-1491911889:824941..825105Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:824941..825105TCONS_00003765-exon-sc0000031-1510915933:824941..825105Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:824941..825105TCONS_00003765-exon-sc0000031-1575043694:824941..825105Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:825653..825834TCONS_00003765-exon-sc0000031-1491911889:825653..825834Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:825653..825834TCONS_00003765-exon-sc0000031-1510915933:825653..825834Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:825653..825834TCONS_00003765-exon-sc0000031-1575043694:825653..825834Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:826891..827066TCONS_00003765-exon-sc0000031-1491911889:826891..827066Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:826891..827066TCONS_00003765-exon-sc0000031-1510915933:826891..827066Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:826891..827066TCONS_00003765-exon-sc0000031-1575043694:826891..827066Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1491911889:827618..827809TCONS_00003765-exon-sc0000031-1491911889:827618..827809Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1510915933:827618..827809TCONS_00003765-exon-sc0000031-1510915933:827618..827809Clytia hemisphaericaexon
TCONS_00003765-exon-sc0000031-1575043694:827618..827809TCONS_00003765-exon-sc0000031-1575043694:827618..827809Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003765-proteinTCONS_00003765-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:821071..827809 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12901	0	0.0486906	0.0476361	0.115985	0.320785	0.165863	0.103519	0.797238	1.07728	0.348545	1.03104	0.200201	0.356419	0.0244187	0.026205	1.19445	1.29045	0.228567	0.382687	3.7836	3.22457	1.62712	3.94478	3.786	5.52164	1.00242	0.12586	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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