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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003761 ID=TCONS_00003761|Name=TCONS_00003761|organism=Clytia hemisphaerica|type=transcript|length=549bp
GTctgtaaaagaaatttttctcagaaatgagtaagaaaatgaaaagtatA
AATAGATACCCCGACCGCAAGTTTCAATCATTTTAAAGAAACAATCTTAC
CGAAAAGACTCTTTCAATACAGACGATTTACAAATAGTCGATTCAAAATG
ATGTCTAGTTCAAGTATCAGCAACGTGGGGTCCCGGCTTGCCAAGGCCGG
TGACAAACTTAACAGTCGGTACGGAGCCAGTACAACGTCTTcatcaaaaa
ttaattcaacAACCGGAGGAGCTACCTCAAGGagaaatatgacgtcatca
tcaagCATAGGTGGATCAAGGGGAAGCTTTCAATTCACAACTTTGAGTAA
GAAGGGAACAAGCTTATAAAGCGGTATTATTCGCGAAATTTGTCACTACA
TTCGCTTCGAAATTCATAcaaatttttcaactcaaagATACAAATTCTTA
ACGATGTAAATTTTAAAACGTTAATTATGTTGGCGAATAACCTTGAAGTC
TCTTGAGTCTATTAGACTAATACGAGGaaactttgaattttaatttttt Run BLAST on NCBI transcript from alignment at sc0000031:759787..760674+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003761 ID=TCONS_00003761|Name=TCONS_00003761|organism=Clytia hemisphaerica|type=transcript|length=888bp|location=Sequence derived from alignment at sc0000031:759787..760674+ (Clytia hemisphaerica)
GTctgtaaaagaaatttttctcagaaatgagtaagaaaatgaaaagtatA
AATAGATACCCCGACCGCAAGTTTCAATCATTTTAAAGAAACAATCTTAC
CGAAAAGACTCTTTCAATACAGACGATTTACAAGTATGTTTCTtacattc
atttttttctaaaactctaGCATATTTGAacaactgtttttttttctttt
ttcaaattcagcatGGCAGTGTACCACCATCTCTAGTTTATCGAGAATAT
TCCGAAATTTTAGTTTCACGGTTTGCGATTGGATTGgcgtagtctacaca
atagacatgCTTTAAGGCTTTtaccaaggacacttgtatagcgtatatac
gctatacaagtgtccttgctTTTACGGAAGCAAGCTATGACGTAGCCTAG
GAATGGGATAGATCTGATATCAATTCAGAGAAATCAATGCATTTAAACTG
TTTCATACCTTTTTATAATTAGATAGTCGATTCAAAATGATGTCTAGTTC
AAGTATCAGCAACGTGGGGTCCCGGCTTGCCAAGGCCGGTGACAAACTTA
ACAGTCGGTACGGAGCCAGTACAACGTCTTcatcaaaaattaattcaacA
ACCGGAGGAGCTACCTCAAGGagaaatatgacgtcatcatcaagCATAGG
TGGATCAAGGGGAAGCTTTCAATTCACAACTTTGAGTAAGAAGGGAACAA
GCTTATAAAGCGGTATTATTCGCGAAATTTGTCACTACATTCGCTTCGAA
ATTCATAcaaatttttcaactcaaagATACAAATTCTTAACGATGTAAAT
TTTAAAACGTTAATTATGTTGGCGAATAACCTTGAAGTCTCTTGAGTCTA
TTAGACTAATACGAGGaaactttgaattttaatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003761-exon-sc0000031-1491911889:759787..759919 | TCONS_00003761-exon-sc0000031-1491911889:759787..759919 | Clytia hemisphaerica | exon |
| TCONS_00003761-exon-sc0000031-1510915933:759787..759919 | TCONS_00003761-exon-sc0000031-1510915933:759787..759919 | Clytia hemisphaerica | exon |
| TCONS_00003761-exon-sc0000031-1575043694:759787..759919 | TCONS_00003761-exon-sc0000031-1575043694:759787..759919 | Clytia hemisphaerica | exon |
| TCONS_00003761-exon-sc0000031-1491911889:760259..760674 | TCONS_00003761-exon-sc0000031-1491911889:760259..760674 | Clytia hemisphaerica | exon |
| TCONS_00003761-exon-sc0000031-1510915933:760259..760674 | TCONS_00003761-exon-sc0000031-1510915933:760259..760674 | Clytia hemisphaerica | exon |
| TCONS_00003761-exon-sc0000031-1575043694:760259..760674 | TCONS_00003761-exon-sc0000031-1575043694:760259..760674 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:759787..760674 + |
Blast
The following BLAST results are available for this feature:
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