TCONS_00003740 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003740
Unique NameTCONS_00003740
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3983

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003740 ID=TCONS_00003740|Name=TCONS_00003740|organism=Clytia hemisphaerica|type=transcript|length=3983bp
ATTTTGGATGACTCAacttttttcttcctggaaaactTTCCTAGTGCCAT
TTTACAACAGAAAAGACAGATTCTGGaGCGTTATCTACAAAACTATTTGG
ATGAAGGAGTAAAAATAATCTGGAGTAAGCgagacgaagaagaagaaggg
gTGTTTTGCTTGTTGCCATGGAGCTTTCAGAAAACAAGGACAAAAAAGAG
ATTGTGAAATATGACCATAACACCGGAAACATAGACAATAGTGTATCGGA
AAGATACGAATCCGGGTATACGGGTACTGTTAAATACGGAATTGACCGTA
AATTTATTGCCTTGATTACCTTTGCTTTTTTATTGCTAATCGTTGGTATT
GTCTTGATTATTCTTGCGAACGTTAACTCGTGTGAGACATCGAGTACTAC
TGAACTCGTTGACCCAGATCAGGGAAAGACTGTTTTAAGTGACGACCTTT
GTGACCCATCTGAAGAAGCTAAGCGAGTcaaattgaatgaatttttgata
aaagtacAAGATGTGTACCACGAAGTTTTCCCGGAAGAGATAGCATGGTC
ACCGGAAGTAACAGATCAAATTATAAGGAATAAATTTAAAGCACATGATC
CATCTCCAGAGAATTTGAAGAAGATTTGGGAAAATGCTGACGCGCTGTTG
AACGAATCAATCAATTTGaatccaGACAAATCGAAATTGAAACCGCGCGA
ACACAAAGCTTACCTGCAAGTACAGCATTTCCTTCAAAACACTTTTGGCT
TTGGTTACCTGAATTACAAAGCTGGATTATGGCTTCTAGGACCTAGCAGT
TTTTGTTCTGAACCGATATGCTATTTGGCGTATGCTGTTTATAATTCCAT
TGGTTCAATGGCTCCTTCGACTGAAGATGATGTTTACTTCGTAGAAAACC
AtttaaaagatgtgaaaaaaTCTATTTACACCTACAttgatgttttgaaa
atgggtaTCAAGAAAGGTATGGTACGAACGCACGTGGAATGTGTCGCTGG
AATCGATGCCATGAAATCTAAGCATCCTAATATCACTGAAAACGGCCCTA
AAGGCATCGTAGGCGAATGGTACGTGCGCCGAATGTATGAGCCGTTATTT
TACAACAACGTTACGATCAAACTGGATAAGATTTTTGTCAAGAAACATGG
TAAAAATGTTACGGATTATATTTTGGGATTGATGGAACCAAACATCGGAA
AACCAATACATGATATGTTACAatatttggAATACGAGCATCTACTTTAC
TGTCGGCCAACTAATGTTGGACCCGCGGGTCTCTCCGCCCTTCCACTCGA
TTACATCTGGTACAAAGGTAACAAGACAAATAACCGGACGGATCCCTATT
TACCGGACTGCGGTAGAAGACCAGAATGCCGATTGAACGGTAGCGTAGCG
TATGAATTGATTTTGGGATATTTTACCACCAAAGATATTCACCCATTGAA
AGTCAATGAGCTTGGTTGGGAAAATTTGTATAAATTATACCCACAGGTTG
AAGAAATTGCCCGTAACGTGACCGGTATTCCAGACACGGAAAGAGCTGTG
AAGGAATTCCAGAAACGGTTGACTAATCATTCGCTGAGTTATTTTCATGA
TCAACCATTGCCAGAGAATGAAACAAAAGGAGATGCATTCTCATTGTGCA
AAAACGAAGAATCAGCTAAAATTCATTGTCCCAATCGTTGGAAAGCTATG
ATGAAGTGGTTCTCTTTCGCTCAAATGGCGATGAGCATGCATGACCCAAA
CACTGTTGATTTCTTTTACTTTACGGGTGAAAAGAAAAGCACACCGTCAT
GTCCGGTAAAACTCCGTCCGGATTTCAATCCATCGAGTGGAGCACAAAGT
TATGATAATAGCGATCCTAATTGCACTTATCCTTGTTTCTACAATATACC
ATTCTTTTTGGAAGATTTGGGACCGAAGTTTTCGGAGTATTCAGTAAACG
CACATGAAGCAAGACCAGGCCATCATACACAGGTTCAAGGGTTGACAGAA
CATTTCCGTGACAAATGCGGTGGCCCAGAAGGTTGGTTGGATGACAAAAC
TTTCTACACAGCTTTCACTGAAGGATGGGCCTTATATGCTGAAAATCCTC
TTATTGCTCAAGACACTGACGTGTACAAAGAAAATCTGATGCAGAAATTT
GGAATGCTTAAGTGGCAGATTTGGAGAGCCCTTCGTTTGATCGTTGATAC
CGGTATTCACTACAAAGGAATGAATCGAACCGAAGCTTTGAGTTTGTTCG
AAAAATACGCTTGGGATGCTACAGATCTCAGTCAAAAGGAGGTCACTCGT
TACCAAAGTAATTACGGACAAGCTACAGCTTATATGATTGGTCAGTTGGA
TATTTGGAAATTACGTAATGATACTGAAGATAGTTTGGGTCATAATTATA
GTATCAAAGAGTTCCATTTACAAGCTCTTTCACAAGGATCATCACCTCTT
CAATATTTGAAAAGCTATATGATGAAATTTATTGATTGTAAAAATGATCC
ATCTCAACAATATTGTGATGTCGTGTTAAATCCCACCAAAGCTTCGAAAA
CGGGGAGACCGTATATCCGGAACAACCGTATGAAATGGCCAACCCATCGA
CATCACATCTAGTGAAATCTTAATGAGATTCTGAAATTGACAATACGAAA
TAGACTTTGTTCCGCATATAATTAGCCTATTCCATAAGATTCGTGTTTTT
AGTGCATGATATATTTAACACCATTGTAGTAGTCCACTTCTAACGGTCGA
GCACTTTTTTGCGAATatacaggttgcaaaattaaactctacagggtgtc
cctaattaaagtatcgagtcgaaacacaactatgagtagtaagttttatg
tgcgtgttcacaaaattgtattttaagctctccctcttttttctttgtca
ttacgattaatttatacgttgtaactaccttttgtaataagcctgtatGA
TGGAGAACgtttttatattttagcgataacacacacaaacttttctactc
aatcgcatgttcaaactcgatactttaattagggacaccctgtagaagac
aaatcattcttttactcgaaattattacttctgattggttcgaatttatt
gacactaataaagttatcagctgtaaactgtaaagcaagtaacatgggaa
taaaatcatgtgaactttttcgagcaatcacatgttttgactgcattgat
ataaatTTACAACACGTGTATTGAGATTACAAAGGAAAcaacaatgaaaa
agtttttaaattccaagtcaatacactcttctcgagatgcataaatttat
tgttgtcctcgttttcaaacagatttcattgctatgaaattatacattta
aaccagtttaaattcccaaaaggcaaacattaactctaaaacaaaagtac
ttgaaattcaaaatgtctcatgaggtgtaaacaacacaattatcattgtg
aatatgtaattttatagcaatgaaatctgtttgaaaacgaggacaacaat
aaatttatgcatttcgagaagagtgtattgaatGATCACAAAAAAAGATT
GTTTTCGACATTTTTCTCGAAGAGAAATTTGCACAGATCTGCATTTTTCC
CTTTAAAGTTGAATGGAAAGCCTGCAACAGATGCGTGAATCCTATGAAAT
AAGCTAGTACTAGCAGGGCTAATACGCAGTCCCTTAGTTCTGAAAGCGCC
AACGTTAATCAGTAATGACTATAATTATAATGCAAGTGACTATGGGATAC
GAAATTGCTAGGACTctcaaatttacaattttcttatgtttttattatat
aatATTGATTTAATCTGAAAAAATAGATATAATATATATTACGataatta
ttatatttttgactgtttgaaaataataaattcctttgaaattaaTACTC
GTACGGCAATATTGTAGATTTTTGGAAATTCTGACGTTCCAATGAATTTT
CTTCAGTAGAAGCATATGAATACCGGTCTGGAC
Run BLAST on NCBI

transcript from alignment at sc0000031:401103..415825+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003740 ID=TCONS_00003740|Name=TCONS_00003740|organism=Clytia hemisphaerica|type=transcript|length=14723bp|location=Sequence derived from alignment at sc0000031:401103..415825+ (Clytia hemisphaerica)
ATTTTGGATGACTCAacttttttcttcctggaaaactTTCCTAGTGCCAT
TTTACAACAGAAAAGACAGATTCTGGGTAGGTAAAGAAGTAACTTTGTGA
AACAGCTTAAGTGATCAGTGCCCGGCTGTgatgtattttataagcatttg
tACGCAGCAGATCTTTTTTACGGTACGGCTGGGTAGGGCAGCGAAAAGAT
TCTGGAAGTGGACCAGAAATTCTTAGCCGGAGAAactaattgaaaatatt
ttcggaaTTGAAACTATACATCAATGTTTCCAAAATCTGCAATTTATGCC
TTAATGAAAAActtgaagaaatattttataaataataAACGAACAGAACA
AAAGGTGTGAgattatacaccttttcgaccgtagcagccaattgccgcgc
gggcattttttgtccattttaccaccctaaaacttatctgatattccgat
ggcgtattggcggccgcccacgctaaagctctgaaaatatgcccgacctt
cagagcaaagtgtgtcgtagcatatttccacatctggtaccagataaccC
TAAAACcttcccagtcttttttttcctaaagacaatagaaaaaggtgtaa
agaaggattggatcgagtttagggtggtaaattaaataataaagtgacac
gcgcctgaccgtgcgactacggtcgaaaaggtgtattgtcaaatgaaaaa
tatacaGGGTGGGCAAAAAAAATATGGTCGGACAAAAGTTATGCTACTTT
CAGAGCAATTAAGTAAAAAAAGTGCTTTGCGAGTAGAATAATTTTTGTCT
GACCATATTTTTTGCATACCCTTTACCAGCTAATTATTATTAGTTGATtg
attctcatttttatattatCAATTTTTACGACTTATTTCAAAGCGGATTG
TACCATTTTTTCACGAAAAATCTATGTGTATCAATATACTTATAACGCTG
AAGATTGTAAAGGCTTGAAGCTTTGAATACTGTTTATTtaacagtctagt
ttttgatattttatgttctggtttaatATGTAATGAATAATGAAGACcaa
tatttttctatttcagaGCGTTATCTACAAAACTATTTGGATGAAGGAGT
AAAAATAATCTGGAGTAAGCgagacgaagaagaagaaggggTGTTTTGCT
TGTTGCCATGGAGCTTTCAGAAAACAAGGACAAAAAAGAGATTGTGAAAT
ATGACCATAACACCGGAAACATAGACAATAGTGTATCGGAAAGATACGAA
TCCGGGTATACGGGTACTGTTAAATACGGAATTGACCGTAAATTTATTGC
CTTGATTACCTTTGCTTTTTTATTGCTAATCGTTGGTATTGTCTTGATTA
TTCTTGCGAACGTTAACTCGTGTGAGACATCGAGTACTACTGAACTCGTT
GACCCAGATCAGGGAAAGACTGTTTTAAGTGACGACCTTTGTGACCCATC
TGAAGAAGCTAAGCGAGTcaaattgaatgaatttttgataaaagtacAAG
ATGTGTACCACGAAGTTTTCCCGGAAGAGATAGCATGGTCACCGGAAGTA
ACAGATCAAATTATAAGGAATAAATTTAAAGCACATGATCCATCTCCAGA
GAATTTGAAGAAGATTTGGGAAAATGCTGACGCGCTGTTGAACGAATCAA
TCAATTTGGTATGTAGGGGCGTTTCGTTTCTACTAATAATAACGCTGTAA
CCATTTTGAGTCCCGTCTAACCGCTAAATCAACTAAGTTTACCGTAcgag
ttttaagtttttgaaaCCCTACTTATCTCTTTTGTCATACCTTTATTTTA
ATCTgaattttcgtcaaatttttcttcaaaacattcaaacgaTATTTGCT
TATCGATAGGTAGATTAAAATGACGTATTAATTTTGTCTAGCCTTTGTTC
AGGCTAAAGAACCTTTTTGCTGGCTAATCGCAAAGTAAGGTAGACTTAGC
CGGCATAGTATACATGCTtcgctttttgaaaaaaaatttctagaaGCAAA
TTTCTGCTTTACAAGCAAAGTTGATTTCGTAGCAGGGTAGAACTGCCTTG
CTTTCGGGTCAACCTGTAGGTATCTATCGATATGTATTTATTtatgttcc
cgtttcatatcaggcacatatatttcatatcaggacagtgtttgcttatt
gttattttatgctgatataagcaaaacaatgtttttcttttcctctttct
gaccaaccttgctccacatccgtgtaaatccaatgtgaaaaagctggtaa
attaaaattgatgagttagcaaacgatatcactcttatttaaaacaaaac
ctttaaccttACTAGTGGAGAACTTTAAAACAACACCTGTGTACCAGCTC
TAAACCAACTTTAAACAGTTAGAGTCTTCAAGGGAACCAACAATTAGTTA
CAGTCTCTTTTATGAGTTTTATGTTAAGGGGTCGAGGGGTCtagtttgaa
ttacagaaagattccaATGATAGAATGTCGAATTGGAGAGAATTGCCTAT
ACTTATTATacttatcgaccgccggaggcggtttctttcatagtggtacg
ctaatctcgttttgccttggctcgttactttgtctgccatttactttcgg
tttttttaactagatNcactgtgacctagttatacttacttttcattttt
agaatccaGACAAATCGAAATTGAAACCGCGCGAACACAAAGCTTACCTG
CAAGTACAGCATTTCCTTCAAAACACTTTTGGCTTTGGTTACCTGAATTA
CAAAGCTGGATTATGGCTTCTAGGACCTAGCAGTTTTTGTTCTGAACCGA
TATGCTATTTGGCGTATGCTGTTTATAATTCCATTGGTTCAATGGCTCCT
TCGACTGAAGATGATGTTTACTTCGTAGAAAACCAtttaaaagatgtgaa
aaaaTCTATTTACACCTACAttgatgttttgaaaatgggtaTCAAGAAAG
GtaagatattttctttttccataaagaacatttttagaggTAGACTTTTC
AATTACTGGGTTTATAAAAATGATTAGCTATTGGAATCTTcggttgttgt
tttttttgagaGCAAAACTGTTCTTTTCCTATAATTTCCGTATTTTTAGG
TATTTTACATGCTATAACCTCATTGTCGTGTTATAACCTCGTTGTCATAT
CAAAGCCTTGTTTTCATGCTAGAACCTCGTTTTCATGTTATATAGGTATG
GTACGAACGCACGTGGAATGTGTCGCTGGAATCGATGCCATGAAATCTAA
GCATCCTAATATCACTGAAAACGGCCCTAAAGGTAATTTGTCAACTTAAT
TTACTTTAAGAGCAGAAAATTTCACAGGCAGAAACATTTGCGAGGTAGCA
AAATCGCGAattttactttcgcgaattttactTTTGGAACGAATTCAGCG
GATAtgactttcgcgaattttagaatgttatttcattttgcaggaaaaaa
agcgaaaaaaaatgcacaaaaactgaaaacttagtataaaatagcaaaaa
aagtgtacttttcGCGGAAAAAACATTCACGAATTTTTCGTGTGATTTCT
TACTTGGCAAAAACTTTTGCGAAAAAGGACAAAAAttgtgaaagtttctg
cccATAAAGTAGAAGTTCCACGAGGACAATTTACAACCACTTTAGTCTTC
GGCCAGTATGCTAGCTATCAAAGCCGTTTTTATACGATACTTGCACTATG
AAGGCAAGGAAAAGTGATAAGATCACCTAGATTTAGTATTTTTTACACTT
TGGAACGGGTTTTAGATTCCTTCACGTTCCAGGGTGtgaaaccattgagt
ttcaagcccgaagagctagaggcgaaactttaacccttctcaggcaagag
aaattgaagctactcatctcccatccagaacgcgtcGTAATCATGAAGgt
ggattgtatctagcggctCCTTttttttggaggactacattctgttaaat
ctagcgatagattatagtttcaatccggcgtttatGTAAAAGCttcgcgc
gggcgttctggatgggaaataagtggtttcatttcccatcaggagtctcg
cctctagcccttcaggcttgaaACTCAGTGTATGAAACGTGCTTATCACA
ACCCAGTTGTAGATAAACTCTACTCACATTTTCTGTACAGTGGCAAAGCA
ACTAAACTTTCTTAGAGTCctaaattttcaacaaaaaaaaacaatttaaa
tcaTTGTTTATATTTTCAGGCATCGTAGGCGAATGGTACGTGCGCCGAAT
GTATGAGCCGTTATTTTACAACAACGTTACGATCAAACTGGATAAGATTT
TTGTCAAGAAACATGGTAAAAATGTTACGGATTATATTTTGGGATTGATG
GAACCAAACATCGGAAAACCAATACATGATATGTTACAGTAAGTGAAACT
AACCGTTCTATTTGTGAAATTCCTCCATCACTTCTAATCAATAGAATGGC
TTCGATTTGTTTCAAAGTGAAACGGAACCGTTACAACATGATCTTAGTAG
ACGAgaagattttaaaataataaaagacAACATTTGAAATTATTGAGGGT
CCCAATAATTtgagggtttttttttttttttttttttggctaaAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttt
tttttttttttttttcggctAGAACATACCTGTTATCTCGCAAAcctcac
aggaaaaaattttcgatttccaagtttggaaattcaatatttttgggttg
gaaattttggttttataattgaaggatggaaatttgagcgattactttaa
gctgatttggaaaacgtaaattacccataggttttgtagaataaaccaat
gccatTGAAatatcaagtgaaaaaaacccatgtagaaatgacaattttcc
aaggctggttggaaaacatgactttttgggtgggaaatttttattttcca
aacNGCATCCTAATATCACTGAAAACGGCCCTAAAGGTAATTTGTCAACT
TAATTTACTTTAAGAGCAGAAAATTTCACAGGCAGAAACATTTGCGAGGT
AGCAAAATCGCGAattttactttcgcgaattttactTTTGGAACGAATTC
AGCGGATAtgactttcgcgaattttagaatgttatttcattttgcaggaa
aaaaagcgaaaaaaaatgcacaaaaactgaaaacttagtataaaatagca
aaaaaagtgtacttttcGCGGAAAAAACATTCACGAATTTTTCGTGTGAT
TTCTTACTTGGCAAAAACTTTTGCGAAAAAGGACAAAAAttgtgaaagtt
tctgcccATAAAGTAGAAGTTCCACGAGGACAATTTACAACCACTTTAGT
CTTCGGCCAGTATGCTAGCTATCAAAGCCGTTTTTATACGATACTTGCAC
TATGAAGGCAAGGAAAAGTGATAAGATCACCTAGATTTAGTATTTTTTAC
ACTTTGGAACGGGTTTTAGATTCCTTCACGTTCCAGGGTGtgaaaccatt
gagtttcaagcccgaagagctagaggcgaaactttaacccttctcaggca
agagaaattgaagctactcatctcccatccagaacgcgtcGTAATCATGA
AGgtggattgtatctagcggctCCTTttttttggaggactacattctgtt
aaatctagcgatagattatagtttcaatccggcgtttatGTAAAAGCttc
gcgcgggcgttctggatgggaaataagtggtttcatttcccatcaggagt
ctcgcctctagcccttcaggcttgaaACTCAGTGTATGAAACGTGCTTAT
CACAACCCAGTTGTAGATAAACTCTACTCACATTTTCTGTACAGTGGCAA
AGCAACTAAACTTTCTTAGAGTCctaaattttcaacaaaaaaaaacaatt
taaatcaTTGTTTATATTTTCAGGCATCGTAGGCGAATGGTACGTGCGCC
GAATGTATGAGCCGTTATTTTACAACAACGTTACGATCAAACTGGATAAG
ATTTTTGTCAAGAAACANATTTCTcgaaacagtttggaaaacgttaaaaa
tccatgtggaaaatacatttttgtgaaattgaaactctttcgattggaaa
actagacttgttgggttggaaatttgtgtttctccaaacagtttggaaaa
cgttaaaaatccatgtggaaattacatttttgtgaaattgaaactctttc
gattggaaaactagactttttggtagcctaaaaatccatgtggaaactac
gtttttctaaccattttctgcgcatgtccttgggaaaaccacaagcgatt
tttcgctcaaaactgttttgatgtatagctaacctagattttaggctata
atgtgagcagtcaagctgtaagtttccatcaggtgaggcgtctcttcgga
gcggcctcggtcaattgcagtgagttcgcacagtgaagcacttagagtac
ttgtgtcatagtttcaaatcacaggaaaaaattccaaggttggaaattcg
atatttttgggttggaaattttggttttataattgaaggttggaaatttg
ggCGATTACTTTAaagtgatttggaaaacgtaaaNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaccgggagccatcgagccta
ggctagcgagtgactgttcacaaaaacaaaaaccttgtttaagatctctt
ttccacatctctgccatcttggattttggcctttttcaacctgaatttta
aaaaattccaaccttgttaaatttggattttggcttttttcaacctggat
ttacgaaaattccaaacttgttaaatttggattatggcttttttcaacgt
gaattttaaaaaattccaaccttgttaaatttagattttggctttttcaa
cctcgattttcgaaaattccaaccttgtttaagcttagattttggctttt
ttccaattgaattataaaaaattccaaccttgttaaatttggattttggc
ttttttcaacctggatttacgaaaattccaaccttgctaaatttggattt
tggcttttttcaacctgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTtcaaccttggag
aatgtcccacattttcaggttggattttccattggattttatcttttttc
caactaagaaaacttgaaatttccaaccttggaaatcgaaaatcttTTCC
TGTGCCTAGTACCAACGCTACCCCCCCCTCCCGAAATATCTGGTATTTGT
TTATAGGACGACTGAAGTTGATATTTTTGCGATATACAGGAGGAGTTTTA
TTGATTTAATGAAGAAATTTCTTTAGGAGTTGTTTGAATAAAAACTGTCA
TTTCATCCATCGAACATTCTTTCGCTTCCTTGTCTGGAGTTGATATTTTG
CGTGGATATCCCAGTAATCCAGGACTTTTGTGGCcaggtagctcagtcgg
tagagcattcgccttacaatccgAGGGTTGtaggttcgatccccggtcac
ctcCAACTCAGCAGATGaatagcttagattgggtaatctgatctaagcag
taagttactgggagttgagagtaggtgtggcggtccacctcagcattcga
tctcccaggtctagcgatAGACTTCCTCATTCCCGGCTCCgtcgacagcc
accagatgaatatacttacttacaaCTTACTTAGGACTTTTAGGGCAGTC
TTCCGTTCTTCACGGGGTCCGGTCTAGCTGACTCGGCTATCCATAGATAG
ATTGTCGaaattttacgtggatagcacAGTAATTTAGGACTTTTaggcag
tctttcgattgttttcacgggttCCACATCCAGCCGGTTctgctatctat
gaactgagcAGAACATTGAAAGGAGCGGTGTTTGAGACGCTGACACGTta
gaccacttggccatcgctccttaTCCAttagcctgtaccagacgaccacg
gctttttcctcgacaccgtAGTGATaaaaatcgcgtgttgggatagagat
aggctaCTTATCCATGAACTGAGCTAAGTATTGAAAGGAGCGAACATTCG
AACCCGTTGTCACCgctctttttttttctaaacgaagttaatttttgttt
tgttttaaagatatttggAATACGAGCATCTACTTTACTGTCGGCCAACT
AATGTTGGACCCGCGGGTCTCTCCGCCCTTCCACTCGATTACATCTGGTA
CAAAGGTAACAAGACAAATAACCGGACGGATCCCTATTTACCGGACTGCG
GTAGAAGACCAGAATGCCGATTGAACGGTAGCGTAGCGTATGAATTGATT
TTGGGATATTTTACCACCAAAGATATTCACCCATTGAAAGTCAATGAGCT
TGGTTGGGAAAATTTGTATAAATTATACCCACAGGTAAGCTTGTTATCAC
CATCCTTGAAAcacttatttttttataagaatcagaaaaattttcttGTT
AACGAAAATATTGGATCTTTCCCCTGTTTTTTTTGTGGGCTTACAAgtaa
taataaattttttacTACACAAACATATAGTGGACTTGGGATTGATCGAC
CTATAGTTTGAAGGTACTTTTATACCTACCCTGAGTCTCGATCTTTCTCT
GTAAGTAAGTTACAATAGGAAAGCATAGCTGGAAATGAGAGAAAGTTTAA
TTTTCTTACCGTACCTTCAAAAATGCTTTTCAGTTTTTCATATGTACTTT
TTATAGGTTGAAGAAATTGCCCGTAACGTGACCGGTATTCCAGACACGGA
AAGAGCTGTGAAGGAATTCCAGAAACGGTTGACTAATCATTCGCTGAGTT
ATTTTCATGATCAACCATTGCCAGAGAATGAAACAAAAGGAGATGCATTC
TCATTGTGCAAAAACGAAGAATCAGCTAAAATTCATTGTCCCAATCGTTG
GAAAGCTATGATGAAGTGGTTCTCTTTCGCTCAAATGGTGAGTAAAAATC
TGCGGTAGATTGATGTGACCTATGTATCATCCTTCCGTTATTGTTTgagt
aatagacgatatcggcttcacatgaaaactcagatttgacccacGAGAAT
TGCCCACAATGTTTTGTGTGGAAAgaatttcaccgtgaacttttttccgc
gcaaagcattgtaggcaattctcgggggtcaaatctgagttttcacgtta
agccgatatcgtctattgttaaTCAATAATTttagcaaatttcgtgaaaa
taatgaaatacaatcatggacaaaatatttgagacaaaggggatttccct
gcgaaattttaaacaccacaaatggttttaagcgcgttaaactacggtta
gaaagtagagttttattTTAGCTTATCCTCGGGGACTCTTTATAGTGTTG
CACCGTTTGTGCTGATAAATGGCCTAGTAGTATATTGCATACGTCGTAAC
CTTTTGGGCTTTGCCTCAGCACGCTTGAAATGTGaaccactagatccagt
ccctttttggagaaaaatgaACCGAAAACCATGACCAAATTGACCAATCA
TAAACTTTGATCGGGTTTCAGGatatatttcattgttttggagttttcat
ataattttcaaaaaccaattaaaaaattccaagatGGCGATCTACTTCAC
AAGACTTAGTGCCATCAATCAGTTCAGTCAggagtagactctagtctaat
ttTATCTCTGCTATTTTACATTTTCAGGCGATGAGCATGCATGACCCAAA
CACTGTTGATTTCTTTTACTTTACGGGTGAAAAGAAAAGCACACCGTCAT
GTCCGGTAAAACTCCGTCCGGATTTCAATCCATCGAGTGGAGCACAAAGT
TATGATAATAGCGATCCTAATTGCACTTATCCTTGTTTCTACAATATACC
ATTCTTTTTGGAAGATTTGGGACCGAAGTTTTCGGAGTATTCAGTAAACG
CACATGAAGCAAGACCAGGCCATCATACACAGGTCAGAATTGTATTTTCA
ATGATAAATTTTCTATTAAGAAATGattgtttttccatttctttgttgat
tttccttgattatttcataattttcatcCATTCTCTgaactcgaacccag
tctctTAGTTCGCTTTTTGATGATTGTGATAACGCTCATAAAAGGTTTGT
CGATCAGTAAAAACAGAAGGTGGTGAAAGTGGCATTGGGTTTTCATCCAC
AATTAGCAAGATGACGGTGGCTGGCACAGTGCTAGTTGCCAATTAGTCAT
TCTCTAGGGAAAAGTAGAATGAACACttatctcataacagatcatccatt
ctgcacATACAAtgctctgctctaaagggatatAGTGAATGTGACGGAAT
TTCTTAAGGAGTCATGGCCTTTAGTTTGAATACAGTATAAGAAGaatcaa
tctttcgcaaatttagaaaCCCGCTTTCCcctggaaaaaattgacgtttt
ttgaattttttcccgAACCCGTGACGTCATTGTATTAGATTGAATACTTG
TCATACGCGGATTATCAGAATCTGTTCGGAGATTAAGTGAAAGACAAAAT
GATATACATAAGAATTTCTTACATCAATCTTTACATTCTAGGTTCAAGGG
TTGACAGAACATTTCCGTGACAAATGCGGTGGCCCAGAAGGTTGGTTGGA
TGACAAAACTTTCTACACAGCTTTCACTGAAGGATGGGCCTTATATGCTG
AAAATCCTCTTATTGCTCAAGACACTGACGTGTACAAAGAAAATCTGATG
CAGAAATTTGGAATGCTTAAGTGGCAGGTAAGCTTTaaactagactggag
tcgttaaTAATCCGTATGTAACAGtgtaatatgggtgttatatgataata
taaTAATGGTAATGAGGTAATATaagattatttattttcttatttattta
tttattaaagaattacagtccaggcacacgagggcctctaaaccgatctt
gtacaaaaaatcattttaaggTACAATTTGTCACGAGGACTTCCCCGCAC
TCTCCAATTGAAATCTTCATTCGACTTGGCTTAATTCATCTCGTCTGCTC
TtcttttccattattttttgctaGAAGACTAGCTTCAAACTGATTGtcaa
ttttacaagcaaatATTCATTCCCGGTTTAAAGAGATTTGGAAACTAGGT
GTTCCTACTGCCCAGATCTTTGACCATTCCGTATTGCTGCCTTTGTGGCA
CCAGAATTCTTTAACCAGAAAACTTCAAACTCAAATTGCTtctagtaagt
aagtaagtctgtaactgcagtcggaggcgacccgaaggctcctcgtTCGA
TAGCTATTTACCCGAATGTAAGGGAGGGCGCCACTCGTTCTCcttggatt
gctccacttacccttgatcattctcttaattgcttagcggagaggcatca
agtaccattttgggaatctttggtataacCCGGCtaggggttgaacccac
aaccttgcgaccCGTAGCCGTACCTTTACACTGCGGTCTACAATATATAA
GAATCCATAAAAATCTGTTAATGGTGGTAGgatgttttatttttgcaatG
ATTTGATATACCTCTGGACATTTCGATcttcaccccctggacatttcgaC
CTTCACCTCCTGGACATTTCGACCTCCACCTCTCTGGACATTTCGATCTT
TACCCCCATTTTGatctttaccccctggacatttcgaCCTTCACCTCCTG
ACATTTCGACCTTCACCTCTCTGGACATTTCGATCTTTACCCCCATTTCG
ATCTTTACCCCCATTTCGATCTTTACCccctttaccccctggacatttcg
aCCTTCACCtcctggacattttgaccttcaCCTCtctggacatttcgatt
ttcaccccctggacatttcgaCCTTCACCtcctggacattttgaccttca
CCTCtctggacatttcgattttcaccccctggacatttcgattttcaCCC
CCTGGCAGGGTGGTTTTGCACAGTCTATGTACGTTAATTAATCGTTTTCT
TTTCACAGATTTGGAGAGCCCTTCGTTTGATCGTTGATACCGGTATTCAC
TACAAAGGAATGAATCGAACCGAAGCTTTGAGTTTGTTCGAAAAATACGC
TTGGGATGCTACAGATCTCAGTCAAAAGGAGGTCACTCGTTACCAAAGTA
ATTACGGACAAGCTACAGCTTATATGATTGGTCAGTTGGATATTTGGAAA
TTACGTAATGATACTGAAGATAGTTTGGGTCATAATTATAGTATCAAAGA
GTTCCATTTACAAGCTCTTTCACAAGGATCATCACCTCTTCAATATTTGA
AAAGCTATATGATGAAATTTATTGATTGTAAAAATGATCCATCTCAACAA
TATTGTGATGTCGTGTTAAATCCCACCAAAGCTTCGAAAACGGGGAGACC
GTATATCCGGAACAACCGTATGAAATGGCCAACCCATCGACATCACATCT
AGTGAAATCTTAATGAGATTCTGAAATTGACAATACGAAATAGACTTTGT
TCCGCATATAATTAGCCTATTCCATAAGATTCGTGTTTTTAGTGCATGAT
ATATTTAACACCATTGTAGTAGTCCACTTCTAACGGTCGAGCACTTTTTT
GCGAATatacaggttgcaaaattaaactctacagggtgtccctaattaaa
gtatcgagtcgaaacacaactatgagtagtaagttttatgtgcgtgttca
caaaattgtattttaagctctccctcttttttctttgtcattacgattaa
tttatacgttgtaactaccttttgtaataagcctgtatGATGGAGAACgt
ttttatattttagcgataacacacacaaacttttctactcaatcgcatgt
tcaaactcgatactttaattagggacaccctgtagaagacaaatcattct
tttactcgaaattattacttctgattggttcgaatttattgacactaata
aagttatcagctgtaaactgtaaagcaagtaacatgggaataaaatcatg
tgaactttttcgagcaatcacatgttttgactgcattgatataaatTTAC
AACACGTGTATTGAGATTACAAAGGAAAcaacaatgaaaaagtttttaaa
ttccaagtcaatacactcttctcgagatgcataaatttattgttgtcctc
gttttcaaacagatttcattgctatgaaattatacatttaaaccagttta
aattcccaaaaggcaaacattaactctaaaacaaaagtacttgaaattca
aaatgtctcatgaggtgtaaacaacacaattatcattgtgaatatgtaat
tttatagcaatgaaatctgtttgaaaacgaggacaacaataaatttatgc
atttcgagaagagtgtattgaatGATCACAAAAAAAGATTGTTTTCGACA
TTTTTCTCGAAGAGAAATTTGCACAGATCTGCATTTTTCCCTTTAAAGTT
GAATGGAAAGCCTGCAACAGATGCGTGAATCCTATGAAATAAGCTAGTAC
TAGCAGGGCTAATACGCAGTCCCTTAGTTCTGAAAGCGCCAACGTTAATC
AGTAATGACTATAATTATAATGCAAGTGACTATGGGATACGAAATTGCTA
GGACTctcaaatttacaattttcttatgtttttattatataatATTGATT
TAATCTGAAAAAATAGATATAATATATATTACGataattattatattttt
gactgtttgaaaataataaattcctttgaaattaaTACTCGTACGGCAAT
ATTGTAGATTTTTGGAAATTCTGACGTTCCAATGAATTTTCTTCAGTAGA
AGCATATGAATACCGGTCTGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002088XLOC_002088Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003740-exon-sc0000031-1491911889:401103..401178TCONS_00003740-exon-sc0000031-1491911889:401103..401178Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:401103..401178TCONS_00003740-exon-sc0000031-1510915933:401103..401178Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:401103..401178TCONS_00003740-exon-sc0000031-1575043694:401103..401178Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:402169..402760TCONS_00003740-exon-sc0000031-1491911889:402169..402760Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:402169..402760TCONS_00003740-exon-sc0000031-1510915933:402169..402760Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:402169..402760TCONS_00003740-exon-sc0000031-1575043694:402169..402760Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:403755..404052TCONS_00003740-exon-sc0000031-1491911889:403755..404052Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:403755..404052TCONS_00003740-exon-sc0000031-1510915933:403755..404052Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:403755..404052TCONS_00003740-exon-sc0000031-1575043694:403755..404052Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:404298..404384TCONS_00003740-exon-sc0000031-1491911889:404298..404384Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:404298..404384TCONS_00003740-exon-sc0000031-1510915933:404298..404384Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:404298..404384TCONS_00003740-exon-sc0000031-1575043694:404298..404384Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:405322..405490TCONS_00003740-exon-sc0000031-1491911889:405322..405490Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:405322..405490TCONS_00003740-exon-sc0000031-1510915933:405322..405490Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:405322..405490TCONS_00003740-exon-sc0000031-1575043694:405322..405490Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:410163..410436TCONS_00003740-exon-sc0000031-1491911889:410163..410436Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:410163..410436TCONS_00003740-exon-sc0000031-1510915933:410163..410436Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:410163..410436TCONS_00003740-exon-sc0000031-1575043694:410163..410436Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:410759..410989TCONS_00003740-exon-sc0000031-1491911889:410759..410989Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:410759..410989TCONS_00003740-exon-sc0000031-1510915933:410759..410989Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:410759..410989TCONS_00003740-exon-sc0000031-1575043694:410759..410989Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:411730..411984TCONS_00003740-exon-sc0000031-1491911889:411730..411984Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:411730..411984TCONS_00003740-exon-sc0000031-1510915933:411730..411984Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:411730..411984TCONS_00003740-exon-sc0000031-1575043694:411730..411984Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:412594..412779TCONS_00003740-exon-sc0000031-1491911889:412594..412779Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:412594..412779TCONS_00003740-exon-sc0000031-1510915933:412594..412779Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:412594..412779TCONS_00003740-exon-sc0000031-1575043694:412594..412779Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1491911889:414011..415825TCONS_00003740-exon-sc0000031-1491911889:414011..415825Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1510915933:414011..415825TCONS_00003740-exon-sc0000031-1510915933:414011..415825Clytia hemisphaericaexon
TCONS_00003740-exon-sc0000031-1575043694:414011..415825TCONS_00003740-exon-sc0000031-1575043694:414011..415825Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:401103..415825 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.30123	4.1723	5.96656	6.2537	4.52432	4.37107	19.7555	25.7447	10.3323	12.8749	2.97123	9.34023	11.4528	13.4529	9.53871	9.98697	17.2198	14.9853	10.9414	11.4703	12.4856	14.4119	6.25954	7.12639	26.5461	27.7368	9.14846	5.40113	8.70099	10.0317
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003740 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top