TCONS_00003717 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003717
Unique NameTCONS_00003717
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003717 ID=TCONS_00003717|Name=TCONS_00003717|organism=Clytia hemisphaerica|type=transcript|length=157bp
ATGGTGTCCAGCTAACTATCTTTTTCACGGGCGGTGTTTTGGCGCGGAAA
GGGTTCTTTATGCGGAAAGAGAACACCAAAACCAACATGGCTAACGGTCC
GGTGATAATCCCGGTGACGGCTCTTTTGATTGGATTAGCCATGAAGTTCG
TTTTTCG
Run BLAST on NCBI

transcript from alignment at sc0000030:895868..896024

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003717 ID=TCONS_00003717|Name=TCONS_00003717|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at sc0000030:895868..896024 (Clytia hemisphaerica)
CGAAAAACGAACTTCATGGCTAATCCAATCAAAAGAGCCGTCACCGGGAT
TATCACCGGACCGTTAGCCATGTTGGTTTTGGTGTTCTCTTTCCGCATAA
AGAACCCTTTCCGCGCCAAAACACCGCCCGTGAAAAAGATAGTTAGCTGG
ACACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002077XLOC_002077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003717-exon-sc0000030-1491911889:895868..896024TCONS_00003717-exon-sc0000030-1491911889:895868..896024Clytia hemisphaericaexon
TCONS_00003717-exon-sc0000030-1510915933:895868..896024TCONS_00003717-exon-sc0000030-1510915933:895868..896024Clytia hemisphaericaexon
TCONS_00003717-exon-sc0000030-1575043694:895868..896024TCONS_00003717-exon-sc0000030-1575043694:895868..896024Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:895868..896024 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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