TCONS_00003694 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003694
Unique NameTCONS_00003694
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003694 ID=TCONS_00003694|Name=TCONS_00003694|organism=Clytia hemisphaerica|type=transcript|length=209bp
ctcaaaagtgcaaatacataaactcgctattgacTAGCTAgcgacacagg
ggtgtttcaaagtttttatctaaattctttgatttttgaCGACTGAGTTG
AAAGGATTTTATTATAATATTTCTGCGTCAGATGTCAAATTTATTGACAT
TCCAACGTCCAGTTTTGTGAGAAGTGAAATAAAAATCTTAACGTTTAAAA
ATAatggag
Run BLAST on NCBI

transcript from alignment at sc0000030:438218..438426

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003694 ID=TCONS_00003694|Name=TCONS_00003694|organism=Clytia hemisphaerica|type=transcript|length=209bp|location=Sequence derived from alignment at sc0000030:438218..438426 (Clytia hemisphaerica)
ctccatTATTTTTAAACGTTAAGATTTTTATTTCACTTCTCACAAAACTG
GACGTTGGAATGTCAATAAATTTGACATCTGACGCAGAAATATTATAATA
AAATCCTTTCAACTCAGTCGtcaaaaatcaaagaatttagataaaaactt
tgaaacacccctgtgtcgcTAGCTAgtcaatagcgagtttatgtatttgc
acttttgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002054XLOC_002054Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003694-exon-sc0000030-1491911889:438218..438426TCONS_00003694-exon-sc0000030-1491911889:438218..438426Clytia hemisphaericaexon
TCONS_00003694-exon-sc0000030-1510915933:438218..438426TCONS_00003694-exon-sc0000030-1510915933:438218..438426Clytia hemisphaericaexon
TCONS_00003694-exon-sc0000030-1575043694:438218..438426TCONS_00003694-exon-sc0000030-1575043694:438218..438426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:438218..438426 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003694 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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