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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003673 ID=TCONS_00003673|Name=TCONS_00003673|organism=Clytia hemisphaerica|type=transcript|length=502bp
TCTTTGGGTAATTATTCTattgtttatcaaaaatttatcaaattattTAC
AACGGGTTAACCATCAAATATATACATAGTAAGTATCTTCATACAAAGAT
TTCAGTTGGACGTTCTCCAGCTGGctcacaacattgtttcaacgttcatc
taacgttatatggacgttttgagctttaaataaaagttaaaacaacgttg
tgtgtcagctggggaGAGGCATAAGACTACAAGGAGCGAAATTCAAGGTT
CAGGGATATCCAAGACTAACCAAATGTTACAGTATCTATGAAGCTTTGTC
ATTAGGAGTTATGATGTTATCTTTTAATTCCAACTTTGATTGAGAAGTAC
CTCTTGAAGGGATAGCGTTCTCAGCTTTCGGCCTCTCGTCGCCACGGCTA
GGGTCACAGTCCTTCTTGATCTGTTCATACCACGTGTAGTAGCAGGTGTA
ATTCTGATAAGGGTTTTGTGGTGTAATGCAGTTCTTCAAAAGTACTTCAG
CC Run BLAST on NCBI transcript from alignment at sc0000030:799484..803438- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003673 ID=TCONS_00003673|Name=TCONS_00003673|organism=Clytia hemisphaerica|type=transcript|length=3955bp|location=Sequence derived from alignment at sc0000030:799484..803438- (Clytia hemisphaerica)
TCTTTGGGTAATTATTCTATTGTTTATCAAAAATTTATCAAATTATTTAC
AACGGGTTAACCATCAAATATATACATAGTAAGTATCGTGTGTTGGACGG
TGAAAAAGAATGCGGCTATTATATTTTGATTTTTCCCGACATGTTTCGGA
CTCGGTCCGTTCTCAAGGGAATGATATTTCTATAGAAAAAANNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGGTCTTGGTCACACTCCTTGTAGAAAGTCTGATCGTTT
AGTTGTCTTAGGGCTTCATTTATATAATCTGCAACGTCTTGGATTACTAC
GGCGCCTCCTTTATCGGCGTTTGTGATGATGATGTCTTCTTTTCTCCTTA
GTTGTTCTAAAGCTTCACGTTCTTCTTTTTTCAGATTGTATTTGCGTTTG
GTTCTTGTGACCTCATGGTTATTTATCTCGTTTTCAAAGGCGTCAATAAA
AGTTTTGACTGTGTGATGTGGGTTATTTGGTGTCCATTGGTTATTTTTCT
TTTTTATGTAGAATGGCTTTTTAGCCATTGTTACATTAGGGTCGTTTCCA
AAATGTGCTTTTAGTTTAATTTTTCTTGCGAAGTCGTTTATGTCGTTCTG
TAGCGTTGTTCTGTTGTAGTTACCTTGTGTTGGACAAAAGTTTAGGTTTT
TACCAAGTAGGTTGTATTCTGCTTTTGTGAATTTTTGTTTTGAAAGATTA
ACTACATTCCCTGAGGGGTCTGTGGCGTATCTTGTTGTTGGAATTGTGTT
GCAAAGTCGCTTAACGTTTTCATGGTAGTGTTTATGAGGTTTATTATATC
GTTTGTGCTTTGTGCCCCTTGAGAAGGGGCAGGCTTGTAGTTTTTTGAAG
GTCCAGGCTCTTCAGGTGTATATCTTGTTGTTCTTTGTGATCTTAGCTCA
CGTATTTGTTCCTGCAGTTTGTCAATTTGCTCGTCACGGTCGGGGGCGTT
GTTTTGCTGTGGCCTTTGCAGGATTCGCGGGGGTCTTTGATTGTAGTTAT
TAGTTAACTGATTTAGATTATTGTTTCTTGGTGCGAAGTTATTTGTGCGT
TGGGTGTAGTTATTGCTTCTCTGGTAGAAGTTGTTTGTTCTGCTGTTGTT
TCTGCGAGCAACTTGAGAGTATAAGGGTTTGTTAGATCTGCTTCTAGATC
GGCTGCGATTTCGTCGTGGTGGAGCATCATCTTCTGCTGTAACGTTGGCT
GATCGGCCTTGGCGAGTGGACTGGTCCACGTTGTATTTCAATCGGTAAAA
TTTCTTGTTTTTCCTGGTATCAAGGGTTTTCTTGCGCGTATCCTGATTTT
CTTTAAGCGCTTTTTTAATTTCTCTGTATTTACCTGGTTCGGTTTTGGTT
TTGATAGCTTCGTCAGCTTCTTTGATCTTGTCATCAATTTCTGGAGTTGT
TTTTTCGCAGAAATCGGCAGTCATCTTCATCAATACAAAAGAAAATTCGT
TGAGTTTACTATACCATTGTTCTACAAATTGTGGATCATGGTTTCCAATC
GATGGTTCTAAATTGATTTGAAGTCCCTTAGGGACAACTTTCTGTTCGAT
GCAACGATTTAAGAATTGTTTGTGTGACTCATATCGGTCTTGTCGATCAA
TCAAGCGGTCAAGTTTGATCAGCTCAGATGTGTTGATGTTATTTTGGGTA
TTTCCCTGTGGAACAAATAAAGTTTCTGAGGCTCTTGATTCGAAAGGTTG
GCTGACAACAATCGATGGTATATCGTCTTCGCGTCGTCTTTTTGCGCGGT
TGTCGGTGTTTTCTCGGTCGGCTGGTGGAAAATTGATCCTTCCAGTGACA
TGGGTAAACGATTTACTCCGTAAGTTACATAGTAAGTATCTTCATACAAA
GATTTCAGTTGGACGTTCTCCAGCTGGCTCACAACATTGTTTCAACGTTC
ATCTAACGTTATATGGACGTTTTGAGCTTTAAATAAAAGTTAAAACAACG
TTGTGTGTCAGCTGGGGAGAGGCATAAGACTACAAGGAGCGAAATTCAAG
GTTCAGGGATATCCAAGACTAACCAAATGTTACAGTATCTATGAAGCTTT
GTCATTAGGAGTTATGATGTTATCTTTTAATTCCAACTTTGATTGAGAAG
TACCTCTTGAAGGGATAGCGTTCTCAGCTTTCGGCCTCTCGTCGCCACGG
CTAGGGTCACAGTCCTTCTTGATCTGTTCATACCACGTGTAGTAGCAGGT
GTAATTCTGATAAGGGTTTTGTGGTGTAATGCAGTTCTTCAAAAGTACTT
CAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003673-exon-sc0000030-1575043694:803364..803438 | TCONS_00003673-exon-sc0000030-1575043694:803364..803438 | Clytia hemisphaerica | exon |
| TCONS_00003673-exon-sc0000030-1575043694:799484..799910 | TCONS_00003673-exon-sc0000030-1575043694:799484..799910 | Clytia hemisphaerica | exon |
| TCONS_00003673-exon-sc0000030-1510915933:803364..803438 | TCONS_00003673-exon-sc0000030-1510915933:803364..803438 | Clytia hemisphaerica | exon |
| TCONS_00003673-exon-sc0000030-1510915933:799484..799910 | TCONS_00003673-exon-sc0000030-1510915933:799484..799910 | Clytia hemisphaerica | exon |
| TCONS_00003673-exon-sc0000030-1491911889:803364..803438 | TCONS_00003673-exon-sc0000030-1491911889:803364..803438 | Clytia hemisphaerica | exon |
| TCONS_00003673-exon-sc0000030-1491911889:799484..799910 | TCONS_00003673-exon-sc0000030-1491911889:799484..799910 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000030 | supercontig | sc0000030:799484..803438 - |
Blast
The following BLAST results are available for this feature:
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