TCONS_00003609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003609
Unique NameTCONS_00003609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3251

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003609 ID=TCONS_00003609|Name=TCONS_00003609|organism=Clytia hemisphaerica|type=transcript|length=3251bp
TCTCGTTGTTTTTTATATGATGCAAacaatgaaacaataaaaatgtaATA
ATGTAATCATTTAGAACAATAACAGGGGTTTTGTGTGAAAATCAGAGGTG
TCAAAATGGAGCCCAACTATGGTGAGAATTttgaacaacaacaaaataaa
tttgaagaaaagaaaatcgGACCTACTACAGAACTACAAGATGATCCTTC
CAAGGAGGAATACTACAtcccaccaccaccaccaccaccaccatcaacga
cccctactacaggccagTACCAACTGAATGTGATACAGTCATCAGTAGGC
CTCCCACAGCCCGTTCCACCCACGCAACAGACCCATCCTGAATGCTCGCC
TCCACCTCAAAATCTATGGAACCAACCGTCAAACAACTCCATCCCAAACT
ATTCTTATTATCCACCTACCGCACCATCTTTTTACTCGGCACCTGGCACT
GGACCTGCGACTCAAGACCTACCACCGCCACCGCAGTTCAATAACCAATC
ATCAGAATATAACATGTATTATCCAGCTTTGTCGCCATCAACTGGACCTT
CAACTTTCGGCCCCGGCGGTGCAATGCCACCAGCACAATATTTAGATTAC
GGTAAACACTGCAATGTTGACGATGATGATGAGAATCGACCTGTGGTGAC
GTTGGAGAATAAATCTTTATGGCAAGAATTTCATGAAGTTGGTACAGAAA
TGATCATCACTAAAACTGGAAGGAGGATGTTTCCGCCCATAAAATTCCGT
ATATCAAACCTGGAACCTAAAACAAAATATATCCTCATCATGGACATCAT
TCCTGCTGATGATTGTCGTTATAAATTCAGCAGGGGAGCGTGGTTAATTG
CCGGAAAAGCCGACCCACCGATGCCTAAACGGATGTTTATTCATCCGGAC
GGACCGAACACCGGGAATCAGTGGATGTCGAAAAGTATTTCATTCAATAA
AATGAAAGTCACCAATTGTGTTCAAGGAAAGAATGGATATCCTATTTTGA
ATTCCATGCATAAATATCAACCTCGTTTCCATATCGCGAAAGTTGCAGAC
TTCTATAAAATGAACATGTCCAATCTGAAGACCTTTGTTTTCCGAGAAAC
CGAATTTTTGGCTGTCACAGCCTACCAGAACGAAAAGGTGACAAAACTGA
AGATCAAATACAATCCATTCGCCAAAGGTTTCCGTGAGGATGGAGCTGCT
GGTAAACGTATTTCAAGAATCGAGAATAACGAGAGTGAtggtgaagaaga
aaaatcaacttCGCATCAAAACAAGAAAACCAAATTCTCACCAACACCCA
ATGAACTAAAAGGAAAACACAAATTAGACGAATCACCAGAATCTGGAATT
TCCAGTTTAAATTCAACTCCAAGCAAGATGCGTTTCAAAGACACAATTTC
ACCTCCAACACATATATCGTCTTACGAAAGTCACATCAAATCACGACGTT
TCCTTTCCCCGACAGCCATGTTTACTTCATCACGTGATCAATTCTTCTCA
TCACGTGATTTTTCACCACGTGATGAGTTCCGATATCATTATAACCCGGC
CGCATCGCCTTCCCCATCCCCGAGTTTCGAAAATTATCTCCCACAAAACA
CTTCAGCGAATTCAGTATTACCAATGGTCCTACCCGGATCTATTTATTCG
TCCGGAAATCCTCAAAATACAGTGAATACACCCGGTACTGAATATAATAA
CGGGGCGAGTTTCCACGATCACGTAGGAGCAGGAAAATCGCTTAAAAAAC
AATTACAACTCAATACGGAACTTTTATCGAGTACTTCTTCTCAATGGCAG
AATTTTGGCAGTTATACCACACCAACTACCAATGTCGGATCACCTTATAC
AcaaaacaattatttttcatCGACCCCCAATTACGGACGGTATGGAAGCA
CCCCTCTTTGTAGACACGGGCTGGCGCATTGTGCAGTTTGCTCATATAGT
AGCtctattttaaattcagctAATTTataatgattatttttgtttcattt
cgattttcgtcttttttgttgttgtgaatatttttcatttttgaattttt
tgtaaaaagaaacttttaaaaagagAGGCCAGAAATAGGacaaacacgtt
tttttataagaacatccaaaatctttgaagccttgggatgttcttaactt
tttgagattcaagcctaaaaatgttaattaacatattcttattttcgcca
ttttttgagtgtttttgtctatttccctaagaaattcagtattttagagt
ccgcaaagccctaaaatgttcttaacttgttcttaacattttggtcatcg
aaatcttaagtttttatatagtttgttcttataaaaaaccgtgtaGTAGT
AATTTGCAACTTGGCGACGCTAGTCTTAAGTTATGTTTCAAAGACTTTAA
CTTGTAAGCTTTTTCAATACTGTGAAAAAGTCCTGTAAAAGTCGATGCCT
CTTGTTGTTAGAATTTGCTGATGAACTTTGCAAAGAATATTTGCTAATAG
CAAAGTTAAGTGTAAATAGGGAGTTAATGTATCAGAGGATTTCGAGGGCA
ACGATAAAGTGAAGTCGatgcaaaacaaagtcgatagttgatgtacggct
ctatatcgccgttgctcacctaaacagatgACGGTATTTTGGGTTTTTTA
CCTTCGTGAGGACGGCGATTTTGgtgacatgtcaactttgctttatatcG
TCTCCTTCGATTTACATAACTTTGCTAATAGATAAATCACGAACGAGGAC
GGACGAATTTCCACTAGCCTTTATTCACAGTAAGGAACTTTTTCTACAGG
CTAAGTACAAAGCAAGATAGACTTACCTCGCGTAGTATATCCGCTTTGTA
ATTTTTCTATCGATACTTTAACATCGCCAATCTAATGTTTTTAAAGGAGA
GCGAATACAAGTGAGATAAATTCTGTTATGAAATATGTACCAAAACCATG
ATAAATAAAGTCTTAACGAAATAAGCTtgcgtcaattttttttgttgcgT
TCTCATTGTATGACTTCATTTTTAATGTTATTTTTAATTGaactttaatt
tactttaaaTCTTTTGTtcataatttatttcaaaatatacgataatttta
ttttttatttatccATTTTGTGACCTTTTGGGCACCTTTTTTTattaaat
acaattttaaaatttacataTCACTACAAATTGAGCTGTATAttatatct
ttaaaattttcaataaaatcgtttttctgaaatatttcaatTAAATTGTA
C
Run BLAST on NCBI

transcript from alignment at sc0000030:264251..273206-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003609 ID=TCONS_00003609|Name=TCONS_00003609|organism=Clytia hemisphaerica|type=transcript|length=8956bp|location=Sequence derived from alignment at sc0000030:264251..273206- (Clytia hemisphaerica)
TCTCGTTGTTTTTTATATGATGCAAACAATGAAACAATAAAAATGTAATA
ATGTAATCATTTAGAACAATAACAGGCGAGTCATTATATTTCTTTTGTTT
TAAAAAAATATCTTTTTTTTTGCTATCCGTGCTTTATGTTGAGCCTCTCT
CGGGATATATTATTTTTTAAATGACCTATTGGAGTTGATAGGTGATATCT
CAGTCACTTTTCCATTCATTTAAAGAGTGTTAAGCTTGTTAGCACGTTTG
GTTTGATATTTTTCATATGGCTTATTTTTCGTGGAATTTGAATTTTTTTT
TATATCTGCTTGTTAAGTTATTTTTTTGTCACACTTTAGTCTAAGCTGTG
AATAACTTTAATTAATTTGATTATCGTAATTTTTGTTGAGCCAAAAATGA
TTTTTAAGGGGGGAAGGAAAAATCATAACAAAATATTCCAAAGTGTCTGT
GTAGCAAGGAGATATACTATTCAATAACCCATCCAATCCCAAGCACTTCT
TTAGACTTTGGACTCCCAAAATCTCATGTCGAAATTCCTTACTTTTTGTC
ATCGACTCTATCAATTTATAAATTTTATGAAGAACTAATGCTATTCTTAA
TTTACCATTAATATTACTAAATGTGTTAAATTGCGAAATTTTCCTTCCCA
CTTGCGTTAGAAGCATAATTTTTTTCCTCTGACGTTTTTGACACTTTTAT
CAGCATTTCCTGATGCATTTCTAGTCCCCTTACGTAAAATTGCACATCAA
TGGCTTCATTTTAATAAGCCTCTGTACCTATTTCATATTTAACTTGTTAA
AATGTTATCACATAAAATTGCTTTCCTCAATTTTTATTATACCTTCGTTT
TTCTTTGTTCTGAATTTTTCTTTTGTTATGCTTATCGTGGTACAAAAAAA
GATGCTGAATTTTACATTGTTTTCTTTTCTTCTCTCTCTGTTTCTTTAAT
TTTGCTTATTGAGCCGAGGTGTGAAAATTTCTCATACTTTGAGGCATACT
TAAATGGCCTCGAACTGTCTTATCATCTGATCTATCTGATAGAAAGAGAG
CGTGAAAAAAGCGTAAATTTTGATAACTAGAGAGAGCGTTAAATTTATTT
TCAGTTTCAGTGTTCTACATTAGCTAAAAAATCGAAAGGTTCTGCAACGA
ATAAGAGTGCGAAAACTAAGTGGCTAGCAAAAGATAAAAATCTATTAACA
AAATAATAATTATAATTCTTGGTGTCAATTTCATCAGGGGTTTTGTGTGA
AAATCAGAGGTGTCAAAATGGAGCCCAACTATGGTGAGAATTTTGAACAA
CAACAAAATAAATTTGAAGAAAAGAAAATCGGACCTACTACAGAACTACA
AGATGATCCTTCCAAGGAGGAATACTACATCCCACCACCACCACCACCAC
CACCATCAACGACCCCTACTACAGGCCAGTACCAACTGAATGTGATACAG
TCATCAGTAGGCCTCCCACAGCCCGTTCCACCCACGCAACAGACCCATCC
TGAATGCTCGCCTCCACCTCAAAATCTATGGAACCAACCGTCAAACAACT
CCATCCCAAACTATTCTTATTATCCACCTACCGCACCATCTTTTTACTCG
GCACCTGGCACTGGACCTGCGACTCAAGACCTACCACCGCCACCGCAGTT
CAATAACCAATCATCAGAATATAACATGTATTATCCAGGTACACTATTTT
TTTAATAAGAACAAACTATATAAGAACATAAGGCTTCGATGGAATATATG
AATGTTAAGAACATGTTAAGAACATTTTTAGGCCTAAAACTCAAAAAGTT
AAGAACATCCTAAGGCTTCAAAAATTTTGGATGTTCTTGTAAAAAAAGTG
TACCTGGATAATTGATTCTATCATTTTAGCCTCAAATAGTTCTTTTTTAG
TTTTTACCTTATTATTAATCGTCGCTTCGTTTCATATTCCAACTCCTTTT
CGTACATTTCTTAGTTATTTAGGGAAAAAAACGTGTAATGATACTGTTCC
AGCCTTACTTTGTACTGACATTCACTTTTCAACTGATTTCATTCTTTTTT
GGAATATTATACCGAAAGTTAATTTTTTAATTTTTTTATATATCCAGCTT
TGTCGCCATCAACTGGACCTTCAACTTTCGGCCCCGGCGGTGCAATGCCA
CCAGCACAATATTTAGATTACGGTAAACANAGCTTTGTCGCCATCAACTG
GACCTTCAACTTTCGGCCCCGGCGGTGCAATGCCACCAGCACAATATTTA
GATTATGGTAAACACTGCAATGTTGACGATGATGATGAGAATCGACCTGT
GGTGACGTTGGAGAATAAATCTTTATGGCAAGAATTTCATGAAGTTGGTA
CAGAAATGATCATCACTAAAACTGGAAGGTAGCTATTGCTTTTTTGAAAG
AACATCCTAAACTTTTGAAGCCTTTAGATGTTCTTAACTTTTGATTTTTC
GGTCTAAAATTGTTCTTAATTTGACCATTTTAAAAGTCTTTTTGTTTGCA
ATTTCCCAAGAAATCGGGTGTCTTAGAGTCTGTAAAGCCTTAAAATATTC
TTAACTTGTTCTTAATATTTTGGCCATCGAAGCCTTATGTTCTTATGTAG
TTTGTTCTTGTAAAAAACGTGTATACACTTTGAGGTACCTATAAATTCGC
AATTTATCTCCAGGATGGTAACGATAGAATCACGCTTTCTATTGAAATTA
ATAGAAATTTGCATTTCTTTTGTGAGAGATTATTAGTCATCTTTGTTTAG
ATAATGACATGAAAATTTGCTTTAAAAATCAACATGTGTTTTCTATAGCG
AAAGTGTGGTGTTTGTCTCGAGTGCTTTTAGAAAGAAAATTTTCCTTCGA
TATGCTTTTTCATCTGAATCGTGAATAATTACCGATAATTATCTCTAAAT
TAATTANAATATGCTTTTTCATCTGAATCATGAATAATTACCGATAATTA
TCTCTGAATTAATTATTTTTATTGTTGTCTGAAAAATTTTATTTAATCGC
AACATGCCGTACATTAGATACGATCAGTTCTTTTGGCTTTTTCTCTTATT
TCTCTTTTCCAATTTTCCGCGAGGAGTTTAAACTATCCGACAATAGGGAC
CGCTAAACGTGTTAAAGCTTTTGTCTTGGATACAGCAAATTGTTTTGATT
GGAATTTCAAAGAAAAAACTTACTGCCAAGAATTTTTCTAATGACAATTC
AAAAAAATTTAAAAGATTGATTCTTTTTCGAAAAAATATCTTCCTAAAAT
TAATTAAAAAAGGTTTTCCTTTAAATCATTTTAAATCACTTGTGGGTTTT
CTTTTAAAACTTCATTGTGAAATAAAAATGATTTTAAACCGTAAAAAATC
CAACCTGTTCTTTAGAATTAAAAGATAAAAGATTTCAAAAGAATTTTAAC
ACTATTTTTATCTACTCAAATCCTATTGACTTAATTAATTGACTTAGAAA
TAAATCATACCATAGTGTTTATAAACTGTCCTTAATCATGGTGATTTTAA
CTTGATTATTGTGATTGATATTAAATTGTTTCAATAAAAAAGTATGATAA
GAAAGAATGACTTGAGGGGGGGTTTTGGTCGGATTAAGCACGAGGAAGTG
TAATCTCTGTTCAATCGATCTTTCAGTTGTCTTAATTACATCCCCTTCTC
ACAGACCCACTGGGACCTAGATTATTTTTATTATTTTTATATTAACCCGT
ATCTATTATTTTAACTCCCACTAGCTGAAAAAGTCTTACCGGGTCTGTGA
GAAGGGGATTTAATTGTTCTCAAAATCACCGTTCTCGATGTTTTTTTTGT
TTTTTTTTTGCTCGAAAGTTTTTTGTTCTTGTATACTTTTTTCTTATAGG
CCATTTCACAGTCGAAATGAATCATGGGTAATCATGACCACCGCGCTGTA
ATAACAACTTTCTGTTGGTCTAAATTTTTGGATGTTTTTGGGTCCAGCCA
ACGGGAAGCCGTTATGGAGGTGCAATTAGTCCTGATTACCCATGATTCAT
TTCGACTGTGAAGGAGAAACATTTGTGGTGACCGCAATCTTGATTGTATC
TTTTCTAGGAGGATGTTTCCGCCCATAAAATTCCGTATATCAAACCTGGA
ACCTAAAACAAAATATATCCTCATCATGGACATCATTCCTGCTGATGATT
GTCGTTATAAATTCAGCAGGGGAGCGTGGTTAATTGCCGGAAAAGCCGAC
CCACCGATGCCTAAACGGATGTTTATTCATCCGGACGGACCGAACACCGG
GAATCAGTGGATGTCGAAAAGTATTTCATTCAATAAAATGAAAGTCACCA
ATTGTGTTCAAGGAAAGAATGGATATGTAAGATTTCTCATTTTAATTCAT
TGTTCTTAAATCTAATAGGCCTTTCCATAAATTATTTAAAGTTCAACGAC
TACCTCGTTTTGAAACCATTACCAAGGTGATTAATTCCCTTGAGTCTTCA
AATGATACCTTTATGAATAAAGTGAAATTCTTATGGACTTCTCTTGGAAT
CAATAACCATAGCAATATTTTGAAAACGAGGTAAGCGTTGCTCGTGACGT
AATTTATGAAAAGGTCTATTGTTAAAAACTAGTTTTTCATGGAGGCAGAT
TTTCTTATGACATCATTTTAACCCGCGATAGCTGACTGTGCCATTTTATT
CTTACTAGCCTATCTATAGCTTTGGTTGAAAAATTCTCACTATACAGCTA
GATAATGCTATGCTGATCTTTCCTGTGAAGAATACATATATTATTTCCCA
AGAGTATTCCTTTAGCTGAAATAATTCTCACAGATAATTCTCACAGATGT
TTTCATTGTTCACGTTTAAGAATGAAAATTTTAAAGTTTTTCTGTCGATT
AACATTTTACTTCCGTCACAGTGTGTACAACAAATTCTTCATGTGACGTT
TGTTTTCGATATCTGAAACTGTAAATTATGGTGTAAAGAAAAGCTTTCAG
CATTTTAAGTTTATCTAACAAAATCAGAAACCATGGATCAATCGCAGGCG
TCGAAAAGTGAAAAATCATTTGCCTCAATTTGCCTATAAAAATACAAAAT
GTGTCCCAGAAAAAACGGACTAGACAATTTTTTGCATAAAGTAAAATCCT
CAAAAAATGATTGAAATAAGATTTAAAATTCTCTGTTCAAGTTCAATCAA
AAGATATCCTCAAGATGATTAAATAGGTTTTTGAGATATTAAGTATACAA
GTCGTAAAATTTCGCGGAGGATTTTATTTTCGATTAAAATTTGTCCGCTT
TTTTCGGACACTCTGTAGATTTATGTTTCAATTTTTCAGTTTTAAAATCA
GAATTCAACTTAACCCAGTTCCTTTTCTCTTCTTTTTTCAGCCTATTTTG
AATTCCATGCATAAATATCAACCTCGTTTCCATATCGCGAAAGTTGCAGA
CTTCTATAAAATGAACATGTCCAATCTGAAGACCTTTGTTTTCCGAGAAA
CCGAATTTTTGGCTGTCACAGCCTACCAGAACGAAAAGGTTTGAATAGAT
TCTCTGTTATTTTACTTGTACCGTCGAGTATGTATTATATACACTTCTTT
TTCTTATAAGAACAATGAGCCTCTAAATCGCCAAAAAATAGAAATTTAAA
CAATTTAGAGATCAAAGTAGTAAAGATTTGGTATAAAGCCTAAAATATCT
CAATCACACCCTATAACTAAGAACAGGATAAGAACAATTTAAGGCTCAAA
GTGCCAAATATGAGAACAACCGAGCCTCATCAAAAATCTACCAGTTCTAA
TAAAAAAAGTGTTTATCAAACTGTGAATCAAACTGTGTTATCAAACAGTT
TATTCTTTTTTTATAAGAACCAGTAAATTTTTGTTTCTATCATGTTCGCT
TATTTCTAGGCGAAACACCTTGTCTGATCCTTTTGTATAAAATTTAGCTA
GAATTGTTCTTATTTTTTGGTACATTTTGCCCTCATCATCCTGATAAGAA
TATTATTGTAAAAATAAATATTTTAAATCTTACGGGTTATAAAGAGTAAA
AGAGCCTACACGTTCTTTTTATAAGAACATCCAAAATTTTTGAAGCCTTC
GGATGTTCTTAACATTTTGAGTTTTAAGCCTAAAAATGTTCTTAACATAT
TCTTATTTATACTATTTTGTGAGTATTTTTAACCATTTTTTTAAGAAATC
GGGTGTTTTTAGTTGTTGATCTTAATATTTTGGCCATCGAAGCCTTATGT
TCTTATATAGTTTGTTCTTAAAAGAACGTGTACTCAAAATAGATTAAAAA
ATGAGGTTTTCCCTTGCCAAAGTAAAAGAGCCTTTAATTCTTTCAAAACA
ATATGAAGAAACTGTACGTAAGAACATTTTTGATAACACTTCCCTTCAGG
TGACAAAACTGAAGATCAAATACAATCCATTCGCCAAAGGTTTCCGTGAG
GATGGAGCTGCTGGTAAACGTATTTCAAGGTATCTATCTAACTTTGTTTT
GAAGTTTTTAGTTTTACATAAGTGTTCCTGTTGCATATCAGATACATGTT
TTATATCATTGCGGTGTCTCCTATTGTTATATTGTGTTCGATTTTGTGCT
GAATAAACCAATATTGCTCCACAATGTGAGAAAGATTGAAGTTTAAATTG
ATGACTAAGCAAATGATATCAACTTTGATCAGTATACATATATTTTAAAT
CACTTTTCTTCAGAATCGAGAATAACGAGAGTGATGGTGAAGAAGAAAAA
TCAACTTCGCATCAAAACAAGAAAACCAAATTCTCACCAACACCCAATGA
ACTAAAAGGAAAACACAAATTAGACGGTATGTATGCCTAATATTTTCATT
TAGAGGATTACCACATGAAAAGTCCCTGAAAATTGTTGAAATTTGTAAAG
CAAAAATAACAACGTTGGTTATTCATAATATTCATTACTTTCATTACTTA
TTATTCGACGGAAAGGCCCACATCATGAAATTGAAAGTGGGGGGGGGGGC
AATGAATATAAAGTCTATTGAGGTGCAACCAAGAATTTTCAGATTGCAAA
AAATTAGCTTATTTTACCATATTTTATCTCTATAGAATCACCAGAATCTG
GAATTTCCAGTTTAAATTCAACTCCAAGCAAGATGCGTTTCAAAGACACA
ATTTCACCTCCAACACATATATCGTCTTACGAAAGTCACATCAAATCACG
ACGTTTCCTTTCCCCGACAGCCATGTTTACTTCATCACGTGATCAATTCT
TCTCATCACGTGATTTTTCACCACGTGATGAGTTCCGATATCATTATAAC
CCGGCCGCATCGCCTTCCCCATCCCCGAGTTTCGAAAATTATCTCCCACA
AAACACTTCAGCGAATTCAGTATTACCAATGGTCCTACCCGGATCTATTT
ATTCGTCCGGAAATCCTCAAAATACAGTGAATACACCCGGTACTGAATAT
AATAACGGGGCGAGTTTCCACGATCACGTAGGAGCAGGAAAATCGCTTAA
AAAACAATTACAACTCAATACGGAACTTTTATCGAGTACTTCTTCTCAAT
GGCAGAATTTTGGCAGTTATACCACACCAACTACCAATGTCGGATCACCT
TATACACAAAACAATTATTTTTCATCGACCCCCAATTACGGACGGTATGG
AAGCACCCCTCTTTGTAGACACGGGCTGGCGCATTGTGCAGTTTGCTCAT
ATAGTAGCTCTATTTTAAATTCAGCTAATTTATAATGATTATTTTTGTTT
CATTTCGATTTTCGTCTTTTTTGTTGTTGTGAATATTTTTCATTTTTGAA
TTTTTTGTAAAAAGAAACTTTTAAAAAGAGAGGCCAGAAATAGGACAAAC
ACGTTTTTTTATAAGAACATCCAAAATCTTTGAAGCCTTGGGATGTTCTT
AACTTTTTGAGATTCAAGCCTAAAAATGTTAATTAACATATTCTTATTTT
CGCCATTTTTTGAGTGTTTTTGTCTATTTCCCTAAGAAATTCAGTATTTT
AGAGTCCGCAAAGCCCTAAAATGTTCTTAACTTGTTCTTAACATTTTGGT
CATCGAAATCTTAAGTTTTTATATAGTTTGTTCTTATAAAAAACCGTGTA
GTAGTAATTTGCAACTTGGCGACGCTAGTCTTAAGTTATGTTTCAAAGAC
TTTAACTTGTAAGCTTTTTCAATACTGTGAAAAAGTCCTGTAAAAGTCGA
TGCCTCTTGTTGTTAGAATTTGCTGATGAACTTTGCAAAGAATATTTGCT
AATAGCAAAGTTAAGTGTAAATAGGGAGTTAATGTATCAGAGGATTTCGA
GGGCAACGATAAAGTGAAGTCGATGCAAAACAAAGTCGATAGTTGATGTA
CGGCTCTATATCGCCGTTGCTCACCTAAACAGATGACGGTATTTTGGGTT
TTTTACCTTCGTGAGGACGGCGATTTTGGTGACATGTCAACTTTGCTTTA
TATCGTCTCCTTCGATTTACATAACTTTGCTAATAGATAAATCACGAACG
AGGACGGACGAATTTCCACTAGCCTTTATTCACAGTAAGGAACTTTTTCT
ACAGGCTAAGTACAAAGCAAGATAGACTTACCTCGCGTAGTATATCCGCT
TTGTAATTTTTCTATCGATACTTTAACATCGCCAATCTAATGTTTTTAAA
GGAGAGCGAATACAAGTGAGATAAATTCTGTTATGAAATATGTACCAAAA
CCATGATAAATAAAGTCTTAACGAAATAAGCTTGCGTCAATTTTTTTTGT
TGCGTTCTCATTGTATGACTTCATTTTTAATGTTATTTTTAATTGAACTT
TAATTTACTTTAAATCTTTTGTTCATAATTTATTTCAAAATATACGATAA
TTTTATTTTTTATTTATCCATTTTGTGACCTTTTGGGCACCTTTTTTTAT
TAAATACAATTTTAAAATTTACATATCACTACAAATTGAGCTGTATATTA
TATCTTTAAAATTTTCAATAAAATCGTTTTTCTGAAATATTTCAATTAAA
TTGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002012XLOC_002012Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003609-exon-sc0000030-1575043694:273132..273206TCONS_00003609-exon-sc0000030-1575043694:273132..273206Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:271519..271969TCONS_00003609-exon-sc0000030-1575043694:271519..271969Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:271029..271109TCONS_00003609-exon-sc0000030-1575043694:271029..271109Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:270829..270943TCONS_00003609-exon-sc0000030-1575043694:270829..270943Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:268881..269148TCONS_00003609-exon-sc0000030-1575043694:268881..269148Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:267719..267865TCONS_00003609-exon-sc0000030-1575043694:267719..267865Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:266778..266857TCONS_00003609-exon-sc0000030-1575043694:266778..266857Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:266431..266543TCONS_00003609-exon-sc0000030-1575043694:266431..266543Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1575043694:264251..266171TCONS_00003609-exon-sc0000030-1575043694:264251..266171Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:273132..273206TCONS_00003609-exon-sc0000030-1510915933:273132..273206Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:271519..271969TCONS_00003609-exon-sc0000030-1510915933:271519..271969Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:271029..271109TCONS_00003609-exon-sc0000030-1510915933:271029..271109Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:270829..270943TCONS_00003609-exon-sc0000030-1510915933:270829..270943Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:268881..269148TCONS_00003609-exon-sc0000030-1510915933:268881..269148Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:267719..267865TCONS_00003609-exon-sc0000030-1510915933:267719..267865Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:266778..266857TCONS_00003609-exon-sc0000030-1510915933:266778..266857Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:266431..266543TCONS_00003609-exon-sc0000030-1510915933:266431..266543Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1510915933:264251..266171TCONS_00003609-exon-sc0000030-1510915933:264251..266171Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:273132..273206TCONS_00003609-exon-sc0000030-1491911889:273132..273206Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:271519..271969TCONS_00003609-exon-sc0000030-1491911889:271519..271969Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:271029..271109TCONS_00003609-exon-sc0000030-1491911889:271029..271109Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:270829..270943TCONS_00003609-exon-sc0000030-1491911889:270829..270943Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:268881..269148TCONS_00003609-exon-sc0000030-1491911889:268881..269148Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:267719..267865TCONS_00003609-exon-sc0000030-1491911889:267719..267865Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:266778..266857TCONS_00003609-exon-sc0000030-1491911889:266778..266857Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:266431..266543TCONS_00003609-exon-sc0000030-1491911889:266431..266543Clytia hemisphaericaexon
TCONS_00003609-exon-sc0000030-1491911889:264251..266171TCONS_00003609-exon-sc0000030-1491911889:264251..266171Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:264251..273206 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.96219e-09	1.10321e-08	1.51956	1.67507	37.4695	41.116	8.31172	0.319927	2.43531e-07	7.32761e-05	0.0106306	0.00739294	0.923838	0.598477	1.05795e-10	0.204371	1.53046e-10	1.2766e-10	2.3568e-09	4.68998e-10	0	0.163151	0	3.19762e-10	0	0	2.62186e-10	0.052513	0.851914	3.01707e-08
Blast
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BLAST of TCONS_00003609 vs. Swiss-Prot (Human)
Match: TBX2 (T-box transcription factor TBX2 OS=Homo sapiens GN=TBX2 PE=1 SV=3)

HSP 1 Score: 288.115 bits (736), Expect = 2.815e-83
Identity = 128/214 (59.81%), Postives = 164/214 (76.64%), Query Frame = 1 
Query:  577 PPAQYLDYGKHCNVDDDDENRPVVTLENKSLWQEFHEVGTEMIITKTGRRMFPPIKFRISNLEPKTKYILIMDIIPADDCRYKFSRGAWLIAGKADPPMPKRMFIHPDGPNTGNQWMSKSISFNKMKVTNCVQGKNGYPILNSMHKYQPRFHIAKVADFYKMNMSNLKTFVFRETEFLAVTAYQNEKVTKLKIKYNPFAKGFREDGAAGKRISR 1218
            PPA +L   K    +D+ E+ P VTLE K LW +FH++GTEM+ITK+GRRMFPP K R+S L+ K KYIL+MDI+ ADDCRYKF    W++AGKADP MPKRM+IHPD P TG QWM+K ++F+K+K+TN +  K+G+ ILNSMHKYQPRFHI +  D  K+  S  +T+VF ET+F+AVTAYQN+K+T+LKI  NPFAKGFR+ G  G+R  R
Sbjct:   84 PPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTG-NGRREKR 296
The following BLAST results are available for this feature:
BLAST of TCONS_00003609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBX22.815e-8359.81T-box transcription factor TBX2 OS=Homo sapiens GN... [more]
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