TCONS_00003442 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003442
Unique NameTCONS_00003442
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1214

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003442 ID=TCONS_00003442|Name=TCONS_00003442|organism=Clytia hemisphaerica|type=transcript|length=1214bp
CGACGAAAATAATGTATTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTC
CTCTGATGTGTCAAGATTCGCATGGGGCATGGAAACTACACGGTGTAGTG
AGTTGGGGATCATCGAGCTGTCACACCAAATACAAGTATACCACTTTCAC
CAGAATGTCCATGTATCGATACTTCATCAATGATACTCTTGGCTTGACCA
ACAAACCGTCTCTTCCACCACCACCCAAGGgGGGCTGTGATGCCGACGTA
TCGAGCCAAGATGCGTTCCTTTTGAAAAGTTTATACTCTTCATCTACCAA
TCCAACGTGTGGGCAATCTGCGCCAGCATCAGGGCGTGTTATTGCTGGTA
AGAACGCCAAAGACGGTCAATTTCCTTGGCAAGTAGCTATCTACAAGACA
AATTGGAATTGGAATGAGGAAAGGGGAGAACGTGTTAAAAGTACCATGTT
TCAGTGTGGTGGATCATTGATTGCTCCACAATGGGTTTTAACCGCAAGCC
ACTGCGTTTACAGAAGTTATGCCTATAAATTCAATGTCAGTATAGGAGTG
ACAAACCGAAAGACTGGATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAA
ATTTTTCACCCATCCACAATACAAGAAGCACATCTCATTGAACAATGATC
TTGCCCTGTTGAAGCTATCTTCACCCATTCGATTGAGTGATTATCGATCT
ACTGTTTGTTTACCTGGTCAAGGACAACAAGTGCCGGTTGGAACGAAATG
CTTTATCTCAGGCTGGGGTAAAACGAGTGACAAGCCGTTTACAGTGGACC
ACTTGCAACATGCACCGTTGCGCATTCTGTCCAATGAAGTCTGTTATAAG
CGACAATGGAGATTAAATGAAATCACAGACAAAATGGTTTGCGCATCCGC
CGGTCGTGGTTGTCCACAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGC
TTACATGTCAACAACCAAACGGTAGTTGGATTCAACATGGCGTGGTTAGC
TACGGGTCGCCATACTGCGACACTAAAGAAGCGAGTACAGTTTTCACACG
TGTATCGGAATTTAAAGATTGGATCGATAGTATTATGCAGAATTGAACAC
TTCAAGGACAGAGAAAATTGAAGCATTGATCTTAAACttgttattttaaa
aatattagcaCTAGAAATTTCAATATCATTATATCAAAAGATAGAGTGaa
acaattttgaccaa
Run BLAST on NCBI

protein sequence of TCONS_00003442-protein

>TCONS_00003442-protein ID=TCONS_00003442-protein|Name=TCONS_00003442-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
DENNVLASGCQGDSGGPLMCQDSHGAWKLHGVVSWGSSSCHTKYKYTTFT
RMSMYRYFINDTLGLTNKPSLPPPPKGGCDADVSSQDAFLLKSLYSSSTN
PTCGQSAPASGRVIAGKNAKDGQFPWQVAIYKTNWNWNEERGERVKSTMF
QCGGSLIAPQWVLTASHCVYRSYAYKFNVSIGVTNRKTGSVHEQRVGVEK
FFTHPQYKKHISLNNDLALLKLSSPIRLSDYRSTVCLPGQGQQVPVGTKC
FISGWGKTSDKPFTVDHLQHAPLRILSNEVCYKRQWRLNEITDKMVCASA
GRGCPQSGCQGDSGGPLTCQQPNGSWIQHGVVSYGSPYCDTKEASTVFTR
VSEFKDWIDSIMQN
Run BLAST on NCBI

transcript from alignment at sc0000028:561033..574392+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003442 ID=TCONS_00003442|Name=TCONS_00003442|organism=Clytia hemisphaerica|type=transcript|length=13360bp|location=Sequence derived from alignment at sc0000028:561033..574392+ (Clytia hemisphaerica)
CGACGAAAATAATGTATTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTC CTCTGATGTGTCAAGATTCGCATGGGGCATGGAAACTACACGGTAAGGAT CAATTTACATCATTTAAGGGATCAGGTTTgaatttaattcaattttaagG ATTATACACTTGTGAATTTCCTTTGTTTATCAAAGTTGCTATCATTGTTT GATAAGCCGGTATATGAAACCGTTTGAGCTTAAGCAAATGAGCAGGCCTT GATCTTACTATTCAGTTGTGTTAAATTTGATGTGATGCCCAAGTAGGaca caaaaatcttttattaaaaaaggCAGGTAGATCGGTACATTTGCAATAGC TTTTTTCCACAacagaccttttcataaattacgccaTGAGCAACGtttgc ctcgttttcaaaatattgctatggttaTTGATTCTAAAAGGAGATCATAA GAGATCGGCTCTATTTATAAAAGTGTTACTTGAAGACTCAAGGGATTTAA TCACCCTgacaatggtttcaaaacgagacagttgttgcactcaaaataat ttataaaaaagccTATAAACTTAAACAATTTCTACACTCTTCTAGACCTG GAATCTCATTGATCTTTCAGGTGTAGTGAGTTGGGGATCATCGAGCTGTC ACACCAAATACAAGTATACCACTTTCACCAGAATGTCCATGTATCGATAC TTCATCAATGATACTCTTGGCTTGACCAACAAACCGTCTCTTCCACCACC ACCCAAGGGTTTGTTATCATTAGGCTATTCATGATCTCAATCGCTCATTG gctgtaagtgacgtaaaatcagtcaatacgtcactttcaaccaattagct attgggtggaatggaagacattgcaatggtgcatatcatgaattccagaa aaaagatttatacaCCCTAGGTTGAGGAGGTCTTTGTTGGGAAAGGACCC CTGTATTTTCTTCCAATTTATCAGGACCCTATTAgtttgtttttctcatt ttttcgaccaccctggattttcgctGACGAACAGCaccaaaggctaataa aagtcacaATTATACAATTTGtaaattatttataaaaagtcGACACCAAG TCGTTGATGTAGGGCAAGCAGTTTCTGCACGGACATGATGTAGGCCTCCA TTGCTGATCGTTCTATTACCTCACCCACAAATACCCTAACAggaaatatt attttgaaataacttttaaaaggacattcaaaaaatatctttatGTAATC CATACAAAATGTGTTAATAGACTCGCgatcttttgatttattttttgtca ctttttaggGGGCTGTGATGCCGACGTATCGAGCCAAGGTAAATGCACAT TTTATATTCATTCATATTCGTTTTACCCATACATTAGATAAATACcatca ttttttcaaatattaatttaTTCGGGAGGAGGGTTGGGAGGTTAAAAACA GGGCAGCATGGGTCGTGGTGCTTTTAGGTCCAGACCTTTTTTAACTATAT AATAGGACACAAATAAGTATAATGCAGCCACTCAAGGTTAGTATCAATTA CTAAAGACCAGTAGATCACCCTGCCAGTAGGAAGGTCAAGACCTCCTGGT GCATAATTCTAAAAATTGGGTTATCCCATCTTATGATGCCAGTGGTAAGA AATTTCTATCGATGTGTTCCGTTCTCTTCAAAAAACCTGAAATTTCTCAC GTGACTCATTGGTATTAAGAGTGGAGGGGGAGGGCTTTTGATAATCCTGT ATATTCCGGTATATTGAAAGGCTGAATTTCCGGTATTCCAGTACTCTTCA GAACGTTTTAACTTAAGGGTTTTTGTTCGGTACGATGgtgttttgtaaaa aaatgataCTACTATTCCGGTATTTTGTCTTTTCCTACAATTACTACTAG GTCGTTTCATTATTCCTCCTTTTAGATGCGTTCCTTTTGAAAAGTTTATA CTCTTCATCTACCAATCCAACGTGTGGGCAATCTGCGCCAGCATCAGGGC GTGTTATTGCTGGTAAGAACGCCAAAGACGGTCAATTTCCTTGGCAAGTA GCTATCTACAAGACAAATTGGAATTGGAATGAGGAAAGGGGAGAACGTGT TAAAAGTACCATGTTTCAGGTATGTCTTAAGGCTGGTCTTCTttgcgcgc gcttcaatcgcactttttcgagcaaagcttccacgctattggtcaaaaga aaaatgaagcaactccattggcgcgatctgacgtaacggttgaaaaaatt ctttcaagcgcgctacatttttatgacataatcttttttccaagcaaaat ggattgaagccaaaaagtgcgattgaagcATGCGCAAGTGAAGACCGGCC TTTAGGTTTGATAGCTTGGGTCGACTAAAAATTGTCTTCAATTTGCGAAC GCTTTTATATGTGGACAGTCTGAATGCAACAAACaagtatcaaaaattga gaatggaGGAAAACTTACAACGTACTTCCCATGCTAAggcaatagcgagt ttatgtatgtgtgtttttcagcgacggagacggtaaggttctaatttgag tagatcctgaccagctgaggacgacggtaaatcagcacttttaccgtcct cgattttgcggggtggaattgcgggtttttctaaatcgcttcagtcactc aaccgtcctcaaaagcgcaaatacataaactcggtaatctTAGAGTGGCA TTGAGTGTTAGGCAATAATTCCAATATGAGAGGGGTTAGATGGCTTCTAG ACTATTCTTAGGCTTATCTGAACAACTTTGAGTGTTCGGATTCTGATATT CTAAGGTCCTAAATCTTAGGTCTCATGACGAAAGTCGGGGTTAAAACTCT TCAGTAATTTAGAGCGTGAGAATTTAGGTGTTTAATGTTTAGCAAGGAAT tccccaacctcgttccctgtgcattatcagctttttgatgcttactgaca gcgctagataataccctggcgtTAATCAGAAACATAAATAAAGCCTaaaa tacacggggacgaggttgggaaTCCCCCTTTTTACCAAATATTGCGAATG TGACGATTCTCTCTCCTTTTTCGCACCAGTGTGGTGGATCATTGATTGCT CCACAATGGGTTTTAACCGCAAGCCACTGCGTTTACAGAAGTTATGCCTA TAAATTCAATGTCAGTATAGGTAAGTCTGATCCGTTTTCAAGGTTTTAAA GCATCCCTGAAATACCGCGAATCATCATTTGTCACTGGTCAAaaatacat ccctgtctcacagccccggtgagagtttttcccacagtggggatgaaaac tTATATCGAaatatcaaagtcaattttccaaatTGACGAAATTTACtaac cggggacgaaatttgtCCAATTTTTTGTTAAGTTACGCGATTTCTGCcat aattatatggttgattacatttagcttagatttgtaaaggacgagcgggg cgataaatccgtattatcggcgatccaaaaaatatctgcaatctgattgg ttaaaaagagtacaatatatcttgtattttacatgtaaaaatataaattg acgaaaagatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt cctccaacacaaaaagtgcattttttgggtcaccgataaaccagttatca gacatttgctcgtacaatatggaaatatttcactcgttccggattctccg tatattttcctcgcctacaggctcggaaaatattgtacggaaaaatctcg gaattcgtaaaatatttctcatattgtactcgcaactgtccgataactat tacatagccccgcttttttgtaatcgccctgatgtaaacaaaaattttta ttggttgaaatatcgtacgatattttgattggttaacaaaatatcgtacg aaatttttaagccaatcaaaataaaagtgtcagtcgaatgtttttttata gttttgaatgtttttataagtttcgaaaagaatagcgattgagtgttctt caattctttttttgaccatataattaacgcggaataacatggtatNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttttttactt tgaaaaatcttatatataccgtttagaggggtgaaataagggcaaaattt tcttcgtcgcccaaccatggtgggcgacatatttttttggccccctcaat tcgatgcgcacgccgggggccatgaaaccatgttattactagtacttaTG AAAGCAAATGTTGGAATCATTAGACTTGTAGACCCTAATCTATAAACCCT TGCGCAAATTGAAAGTTACGTAACTtcacaaaatatgaaaaatctcCATT GCTCCAATgctcattttttaaaaagaaaactctACCTAACTCTCatcaaa ttgaaacaaattcAATTATGCGCCAACCTCATAGGAGTGACAAACCGAAA GACTGGATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAAATTTTTCACCC ATCCACAATACAAGAAGCACATCTCATTGAACAATGATCTTGCCCTGTTG AAGCTATCTTCACCCATTCGATTGAGTGATTATCGATCTACTGTTTGTTT ACCTGGTCAAGGACAACAAGTGCCGGTTGGAACGAAATGCTTTATCTCAG GTATGAAATACCATAGCCCACATTGTCCTATTTTGAGTACACCAGGAtgg ttcaaaatgtttttttttattttgcatcAACATTATCGCAATTTTAGTCT GAGTCGCTTCCCCTTCAACGTTAGGTAGGCGACTGGGGTCACATTAAAAA AAGTCCTTTAGTTAAAAAATGTTACCGGAAACGTaggtactcttgtctcc cgaatagacgtcccccccgctaattgttaatcgaaaaaaatccatccccc cgtgtgcatagcactacttcgtcacatatccttacttcgtctccttttgt tattttctcttttacgtcataatatatgcatgaataATCGCATAAATTAT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTGTGCTCAAATTACGACTTCACAAcattttgaa agtattctggtGATTTTAAATTGGATTTTAGATCATTTTGAGTAGCTACA AATGTTTTAGAAGCGTACGGAGCAGGTTAAACGCttaatttctgacaaaa atatcCCTTTAATGTAAGCCACAAAATAGAACGTTTAACAGTGGAATATC GTGTACATTTAATGCTTTTCGtaaaattcaatctttctaCCATCGAGAGC TGAAGGTTTCTTTTTTGTATCATCTCTAGTTTTGATGTGGCTTACATTCT AAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttttt caatcatatCCTCGTCTTGAGTTCTATAAGCCTCTGAGATTTGAAGGCTA GATTCAAAATACCTGGGGAGttatttcaaaaagttgtttttggccacttt ttccaatgtcacactatttttgattagcatctagtaacggcttgtcactg tgccgggtgcatactcggcgccttgggccccgcagggttgatagtaacgg ctcgaatttcagtcaggttaaaaaaggggcaattttacccatattataat aacataacccccgtcttttttgttattgtataagtatttccaaattttga tttctgctgtgcgagtgtggctccacgggatagcgcgctgggttttctga tcagaaactctttcatttgggggtccgacttttgtagatgggggtccgac ttttgtagataggGGTCCGATTTGGGGTCCGAATTAGGGTCCGATTTGAG GTCCGATCTTGGGTCCGAATTAGGGTCCGATTTGAGGTCCGATCTTGGGT CCGAAATAGGGTCTGGGGTCAGGGTCCAAAGTCCGGGTCCGACTTTTACA GTATGCCCTTCTAAGAAGCGGCACaagaaaactaataaaataatggaatc aaatttgatattattttttgaataattttaaataaattagttTTCACCGT GATCTATCTGTGGaagtttaaaaaatctaaatttttcagCTAGTTTCTTT AGTATCTCTAAAAGTAATGCTAAAGTCTCTTTATAATAAGTCAAAAtgta gaagaaagaagttttttgaaaCATACATCAACCAGGTCACAAGTTCTGGG ACACTTCGTTTCGACAGATCACTCTATCCTATCCTGATCACGGTTGGGAT CTCTTAAAATCGGTCATACCAGTTAAAAATCGCcgtaaaaatttcaataa tatttttagggttaagattcaaaagaaagaaaaccctaaagcttaaaaaa aattaaatattcttaacaaaTCTCAATAGAAAAAAGTATATCTCATTCTG TCTCGTCGGGCGTTTCGGCCGCAAATGTACTAAAAGTGCAAGCTAGCAGT TCCTCTTCACCTGAAGTTTCAATATAtcgtaaaattctttaaatatcgaa gaaatttttggacGAATAATGGAAGTGAGGAGAGCTTTTAATGAAAGATA TGATTAAGTAACATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGGtaaaaaccttatgttttcgcttctttgacatgtttaagaacaaact gcttttgaaaaaatgaatttaaaaaattacatcatgagtaattaaggaat aagtgtggcatggaccttaataaaacgtcataacaacGCTATTCATAtac atttcacaaaaaaagggctttgaaaggtgaaaaactcttcttcgaaaaac tcttcgtttttttcttcatttaatttcttcatctcaatttttcgattttt aaattctaataaggtaggtttaacaggacatataaaaaaagttatacatt aatcttttcaaaatgcagaaattgtcatttaagttggtgtaaaatcgaaa aattgggtatgtccagAGGCCTTTAAGGAGTAAAGAGTCacgaccaagta gtgtttgatgtttttggtCCAAAACATAAAGATTTCTAATGAATAAAAAG ACGTGACCAaatagtgtttggtgttttcgTGAGAAAGTATGATCATTCCT AATGAGTAAGAAGGCGTGACCAAgaagtgtttggtgtttttggtcgaaat tattttgcaaaatttttaaagaacccttacgcaatgcatcgtgacaaagt aaggaaaatttttttgcctgatctgcgaaatctaactttcaagtcatgtg accaagtaaggataaatttttttgcctgatctgcaaattttaactttcaa gtcatgtgaccaagtaaggataaatttttttgcctgatctgcaaatttta actttcaagtcatgtgaccaagtaaggataaatttttttgactgatctgc aatatgtaactttcaagtcacgtgaccaagtaaggataaattattttgac tgatctgcaaaatctaactttcaagtcatgtgaccaagtaaggataattt tttttgtatgaTCTGCAATATCTAAaattcaagtcatgtgaccaagtaag gataatttttttttgcctgatctgcaaattctaactttcaagtcatgtta ccaagtaaggataaatttttttgaatgatcTGCAatatctaactttcaag tcatgtgaccaagtaaggataattttttttgactgatctgcaaatctaac tttcaagtcatgtgaccaagtaaggataaatttttttgaatgatcTGCAa tatctaactttcaagtcatgtgaccaagtaaggataattttttttgactg atctgcaaatctaactttcaagtcatgtgaccaagtaaggataaattttt ttgacagatctgcaaattctaactttcaagtcatgtgaccaagtaaggat NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTTGACTGatttgcaaaatctaactttcaagtcatgtgaccaagta aggataaattattttgactgatctgcaaaatctaactttctagtcatgtg accaagtaaggataaatttttttgaatgatcTGCAATAACTAACtctcaa gtcatgtgaccaagtaaggataaatttttttgacagatctgcaaattcta actttcaagtcatgtgaccaagtaaggataaatttttgcgaaatttttaa agaactcttacgcaatgcatcatgaccaagtaaggataaattttttttga ctgatctgtaaaatttaaatttcaagtcatgtgaccaagtaaggataaat tttttgactgatctgcaaagtataactttcaagtcatgtgaccaagtaag gataaatttttgcgaaatctttaaagaactcttacgcaatgcatcgtgac caagtaaggataaattttttttgactgatctgtaaaatttaactttcaag tcatgtgaccaagtaaggataaatttttttgactgatctgcaatatgtaa ctttcaagtcacgtgaccaagtaaggataattttttttgcctgacctgca aattttaactttcaagtcatgtgaccaagtaaggataaatttttttgact gatctgcaatatgtaactttcaagtcacgtgaccaagtaaggataatttt tttttgcctgacctgcaaattttaactttcaagtcatgtgaccaagtaag gataaattattttgactgatctgcaaaatttaactttcgagtcatgtgac caagtaaggataaatttttgcgaaatttttaaagaactcttacgcaatgc atcatgaccaagtaaggataattttttttgactgatctgtaaatctaact ttcaagtcatgtgaccaagtaagaataaatttttttgactgatctgtaaa atttaactttcaagtcatgtgaccaagtaaggatacattttttgactgat ctgcaaagtctaactttcaagtcatgtgaccaagtaaggataattttttt tgactgatctgcaaattcaactttcaagtcatgtgaccatgtgTAGAGCA CCCGCGCTTGCGTATTATGGTTTTTTCGAGATATTTCTTTAGAATTCCAA TCACGATTGTTCATCCGTGTACTCACTCTTCAAAATGTTACATGTATAGT AGTCATTTGATTAGTCAGTTAAAAAAATgtactagccataattttcatta aagtgccaccgcagaagaacgatcaaatgtgtccatctcatagatatctt cttatagttatagagataagataaagttacttatctgtttttttgtcatc tcttttattaccaaaataatggtatataatgatttgtttatatcatacta aacgctactgtactaaactgccattttacactactgaaaaacgcgcgcaa aattatgagatgtttgcccaacttccttatgcgtgaagctatgaatgtcA TCCTGGCTTACTGCGGTGGCAATAATGTCAAAGTATGTTTTTATTTACCT CTGCGCCCATCATTTTCACACCTAACGGTAATTATTTTATGtattctaga aaaatatatctgtcaatcaacttcttAGCTTGCATAATAGCATATGTTAC GTCATGTTTAAATGATTAACAATAATCTAGTAGAAACCATGTAAATTtag ctgtttaatttttaagcataaattatgacgtagaaaagaaaataacaata ggagacgaagtaaggatatgtgacgaagtagtgctatgcacaccccgccc ttattaagacccccctgTAATTAATTTCGAGTAATTCGATATTTATTACA GTGCAGAAAGACCttaaatttgtgaaaattttcctctccgttagtattgg ttcttattttacgtgtttattgGTGAAAGTtgctttttttgttgttgaaa ttgatatcagttaaaaaaattatgtcttcaaattacccccccccccgctt attagaatttagaaaattttcctacccccctgcttattcggaatTTTTtt acagagtgtactacgaagtgTCAAAcatgagatacactctggtacagatt TTCTGTAGCTGTTAACTAGTTCTCAACCACCGTTACGCAAGATAATCTTC TCTTACTGACACTCTCACGCCATAGCGAGTTAACTTTTTATGTAAGTAGC CTAGTCGCTAACTCTTTCATCTCCTCAAAAAGCATTACATAAAGAAAGGG TTTGTCGCTAACAGTGTGGTCTAGGCGAACCTTTTTTAACAGCTGGTTGT TAAACGATTTTTTAATCTtagtttttgaatttcaaacatTGCAAGCTGAA AATGTNAAATTTGGTTTTGAATTGCTCGCTCTGGTGAAGGAATGTATATT TGTGAATTTCTAGggtcattaaaaaaatcaaattattctTCTGTTGGATA TTGCTAGGCTGGGGTAAAACGAGTGACAAGCCGTTTACAGTGGACCACTT GCAACATGCACCGTTGCGCATTCTGTCCAATGAAGTCTGTTATAAGCGAC AATGGAGATTAAATGAAATCACAGACAAAATGGTTTGCGCATCCGCCGGT CGTGGTTGTCCACAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGCTTAC ATGTCAACAACCAAACGGTAGTTGGATTCAACATGGCGTGGTTAGCTACG GGTCGCCATACTGCGACACTAAAGAAGCGAGTACAGTTTTCACACGTGTA TCGGAATTTAAAGATTGGATCGATAGTATTATGCAGAATTGAACACTTCA AGGACAGAGAAAATTGAAGCATTGATCTTAAACttgttattttaaaaata ttagcaCTAGAAATTTCAATATCATTATATCAAAAGATAGAGTGaaacaa ttttgaccaa

Coding sequence (CDS) from alignment at sc0000028:561033..574392+

>TCONS_00003442 ID=TCONS_00003442|Name=TCONS_00003442|organism=Clytia hemisphaerica|type=CDS|length=7665bp|location=Sequence derived from alignment at sc0000028:561033..574392+ (Clytia hemisphaerica)
GACGAAAATAATGTATTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTCC
TCTGATGTGTCAAGATTCGCATGGGGCATGGAAACTACACGGTGTAGTGA
GTTGGGGATCATCGAGCTGTCACACCAAATACAAGTATACCACTTTCACC
AGAATGTCCATGTATCGATACTTCATCAATGATACTCTTGGCTTGACCAA
CAAACCGTCTCTTCCACCACCACCCAAGGgGGGCTGTGATGCCGACGTAT
CGAGCCAAGATGCGTTCCTTTTGAAAAGTTTATACTCTTCATCTACCAAT
CCAACGTGTGGGCAATCTGCGCCAGCATCAGGGCGTGTTATTGCTGGTAA
GAACGCCAAAGACGGTCAATTTCCTTGGCAAGTAGCTATCTACAAGACAA
ATTGGAATTGGAATGAGGAAAGGGGAGAACGTGTTAAAAGTACCATGTTT
CAGTGTGGTGGATCATTGATTGCTCCACAATGGGTTTTAACCGCAAGCCA
CTGCGTTTACAGAAGTTATGCCTATAAATTCAATGTCAGTATAGGAGTGA
CAAACCGAAAGACTGGATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAAA
TTTTTCACCCATCCACAATACAAGAAGCACATCTCATTGAACAATGATCT
TGCCCTGTTGAAGCTATCTTCACCCATTCGATTGAGTGATTATCGATCTA
CTGTTTGTTTACCTGGTCAAGGACAACAAGTGCCGGTTGGAACGAAATGC
TTTATCTCAGGCTGGGGTAAAACGAGTGACAAGCCGTTTACAGTGGACCA
CTTGCAACATGCACCGTTGCGCATTCTGTCCAATGAAGTCTGTTATAAGC
GACAATGGAGATTAAATGAAATCACAGACAAAATGGTTTGCGCATCCGCC
GGTCGTGGTTGTCCACAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGCT
TACATGTCAACAACCAAACGGTAGTTGGATTCAACATGGCGTGGTTAGCT
ACGGGTCGCCATACTGCGACACTAAAGAAGCGAGTACAGTTTTCACACGT
GTATCGGAATTTAAAGATTGGATCGATAGTATTATGCAGAATTGAGACGA
AAATAATGTATTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTCCTCTGA
TGTGTCAAGATTCGCATGGGGCATGGAAACTACACGGTGTAGTGAGTTGG
GGATCATCGAGCTGTCACACCAAATACAAGTATACCACTTTCACCAGAAT
GTCCATGTATCGATACTTCATCAATGATACTCTTGGCTTGACCAACAAAC
CGTCTCTTCCACCACCACCCAAGGgGGGCTGTGATGCCGACGTATCGAGC
CAAGATGCGTTCCTTTTGAAAAGTTTATACTCTTCATCTACCAATCCAAC
GTGTGGGCAATCTGCGCCAGCATCAGGGCGTGTTATTGCTGGTAAGAACG
CCAAAGACGGTCAATTTCCTTGGCAAGTAGCTATCTACAAGACAAATTGG
AATTGGAATGAGGAAAGGGGAGAACGTGTTAAAAGTACCATGTTTCAGTG
TGGTGGATCATTGATTGCTCCACAATGGGTTTTAACCGCAAGCCACTGCG
TTTACAGAAGTTATGCCTATAAATTCAATGTCAGTATAGGAGTGACAAAC
CGAAAGACTGGATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAAATTTTT
CACCCATCCACAATACAAGAAGCACATCTCATTGAACAATGATCTTGCCC
TGTTGAAGCTATCTTCACCCATTCGATTGAGTGATTATCGATCTACTGTT
TGTTTACCTGGTCAAGGACAACAAGTGCCGGTTGGAACGAAATGCTTTAT
CTCAGGCTGGGGTAAAACGAGTGACAAGCCGTTTACAGTGGACCACTTGC
AACATGCACCGTTGCGCATTCTGTCCAATGAAGTCTGTTATAAGCGACAA
TGGAGATTAAATGAAATCACAGACAAAATGGTTTGCGCATCCGCCGGTCG
TGGTTGTCCACAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGCTTACAT
GTCAACAACCAAACGGTAGTTGGATTCAACATGGCGTGGTTAGCTACGGG
TCGCCATACTGCGACACTAAAGAAGCGAGTACAGTTTTCACACGTGTATC
GGAATTTAAAGATTGGATCGATAGTATTATGCAGAATTGAGACGAAAATA
ATGTATTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTCCTCTGATGTGT
CAAGATTCGCATGGGGCATGGAAACTACACGGTGTAGTGAGTTGGGGATC
ATCGAGCTGTCACACCAAATACAAGTATACCACTTTCACCAGAATGTCCA
TGTATCGATACTTCATCAATGATACTCTTGGCTTGACCAACAAACCGTCT
CTTCCACCACCACCCAAGGgGGGCTGTGATGCCGACGTATCGAGCCAAGA
TGCGTTCCTTTTGAAAAGTTTATACTCTTCATCTACCAATCCAACGTGTG
GGCAATCTGCGCCAGCATCAGGGCGTGTTATTGCTGGTAAGAACGCCAAA
GACGGTCAATTTCCTTGGCAAGTAGCTATCTACAAGACAAATTGGAATTG
GAATGAGGAAAGGGGAGAACGTGTTAAAAGTACCATGTTTCAGTGTGGTG
GATCATTGATTGCTCCACAATGGGTTTTAACCGCAAGCCACTGCGTTTAC
AGAAGTTATGCCTATAAATTCAATGTCAGTATAGGAGTGACAAACCGAAA
GACTGGATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAAATTTTTCACCC
ATCCACAATACAAGAAGCACATCTCATTGAACAATGATCTTGCCCTGTTG
AAGCTATCTTCACCCATTCGATTGAGTGATTATCGATCTACTGTTTGTTT
ACCTGGTCAAGGACAACAAGTGCCGGTTGGAACGAAATGCTTTATCTCAG
GCTGGGGTAAAACGAGTGACAAGCCGTTTACAGTGGACCACTTGCAACAT
GCACCGTTGCGCATTCTGTCCAATGAAGTCTGTTATAAGCGACAATGGAG
ATTAAATGAAATCACAGACAAAATGGTTTGCGCATCCGCCGGTCGTGGTT
GTCCACAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGCTTACATGTCAA
CAACCAAACGGTAGTTGGATTCAACATGGCGTGGTTAGCTACGGGTCGCC
ATACTGCGACACTAAAGAAGCGAGTACAGTTTTCACACGTGTATCGGAAT
TTAAAGATTGGATCGATAGTATTATGCAGAATTGAGACGAAAATAATGTA
TTAGCATCTGGTTGTCAAGGTGATTCTGGTGGTCCTCTGATGTGTCAAGA
TTCGCATGGGGCATGGAAACTACACGGTGTAGTGAGTTGGGGATCATCGA
GCTGTCACACCAAATACAAGTATACCACTTTCACCAGAATGTCCATGTAT
CGATACTTCATCAATGATACTCTTGGCTTGACCAACAAACCGTCTCTTCC
ACCACCACCCAAGGgGGGCTGTGATGCCGACGTATCGAGCCAAGATGCGT
TCCTTTTGAAAAGTTTATACTCTTCATCTACCAATCCAACGTGTGGGCAA
TCTGCGCCAGCATCAGGGCGTGTTATTGCTGGTAAGAACGCCAAAGACGG
TCAATTTCCTTGGCAAGTAGCTATCTACAAGACAAATTGGAATTGGAATG
AGGAAAGGGGAGAACGTGTTAAAAGTACCATGTTTCAGTGTGGTGGATCA
TTGATTGCTCCACAATGGGTTTTAACCGCAAGCCACTGCGTTTACAGAAG
TTATGCCTATAAATTCAATGTCAGTATAGGAGTGACAAACCGAAAGACTG
GATCCGTCCATGAGCAGAGAGTTGGTGTTGAGAAATTTTTCACCCATCCA
CAATACAAGAAGCACATCTCATTGAACAATGATCTTGCCCTGTTGAAGCT
ATCTTCACCCATTCGATTGAGTGATTATCGATCTACTGTTTGTTTACCTG
GTCAAGGACAACAAGTGCCGGTTGGAACGAAATGCTTTATCTCAGGCTGG
GGTAAAACGAGTGACAAGCCGTTTACAGTGGACCACTTGCAACATGCACC
GTTGCGCATTCTGTCCAATGAAGTCTGTTATAAGCGACAATGGAGATTAA
ATGAAATCACAGACAAAATGGTTTGCGCATCCGCCGGTCGTGGTTGTCCA
CAATCTGGTTGTCAAGGTGATTCAGGCGGCCCGCTTACATGTCAACAACC
AAACGGTAGTTGGATTCAACATGGCGTGGTTAGCTACGGGTCGCCATACT
GCGACACTAAAGAAGCGAGTACAGTTTTCACACGTGTATCGGAATTTAAA
GATTGGATCGATAGTATTATGCAGAATTGAGACGAAAATAATGTATTAGC
ATCTGGTTGTCAAGGTGATTCTGGTGGTCCTCTGATGTGTCAAGATTCGC
ATGGGGCATGGAAACTACACGGTGTAGTGAGTTGGGGATCATCGAGCTGT
CACACCAAATACAAGTATACCACTTTCACCAGAATGTCCATGTATCGATA
CTTCATCAATGATACTCTTGGCTTGACCAACAAACCGTCTCTTCCACCAC
CACCCAAGGgGGGCTGTGATGCCGACGTATCGAGCCAAGATGCGTTCCTT
TTGAAAAGTTTATACTCTTCATCTACCAATCCAACGTGTGGGCAATCTGC
GCCAGCATCAGGGCGTGTTATTGCTGGTAAGAACGCCAAAGACGGTCAAT
TTCCTTGGCAAGTAGCTATCTACAAGACAAATTGGAATTGGAATGAGGAA
AGGGGAGAACGTGTTAAAAGTACCATGTTTCAGTGTGGTGGATCATTGAT
TGCTCCACAATGGGTTTTAACCGCAAGCCACTGCGTTTACAGAAGTTATG
CCTATAAATTCAATGTCAGTATAGGAGTGACAAACCGAAAGACTGGATCC
GTCCATGAGCAGAGAGTTGGTGTTGAGAAATTTTTCACCCATCCACAATA
CAAGAAGCACATCTCATTGAACAATGATCTTGCCCTGTTGAAGCTATCTT
CACCCATTCGATTGAGTGATTATCGATCTACTGTTTGTTTACCTGGTCAA
GGACAACAAGTGCCGGTTGGAACGAAATGCTTTATCTCAGGCTGGGGTAA
AACGAGTGACAAGCCGTTTACAGTGGACCACTTGCAACATGCACCGTTGC
GCATTCTGTCCAATGAAGTCTGTTATAAGCGACAATGGAGATTAAATGAA
ATCACAGACAAAATGGTTTGCGCATCCGCCGGTCGTGGTTGTCCACAATC
TGGTTGTCAAGGTGATTCAGGCGGCCCGCTTACATGTCAACAACCAAACG
GTAGTTGGATTCAACATGGCGTGGTTAGCTACGGGTCGCCATACTGCGAC
ACTAAAGAAGCGAGTACAGTTTTCACACGTGTATCGGAATTTAAAGATTG
GATCGATAGTATTATGCAGAATTGAGACGAAAATAATGTATTAGCATCTG
GTTGTCAAGGTGATTCTGGTGGTCCTCTGATGTGTCAAGATTCGCATGGG
GCATGGAAACTACACGGTGTAGTGAGTTGGGGATCATCGAGCTGTCACAC
CAAATACAAGTATACCACTTTCACCAGAATGTCCATGTATCGATACTTCA
TCAATGATACTCTTGGCTTGACCAACAAACCGTCTCTTCCACCACCACCC
AAGGgGGGCTGTGATGCCGACGTATCGAGCCAAGATGCGTTCCTTTTGAA
AAGTTTATACTCTTCATCTACCAATCCAACGTGTGGGCAATCTGCGCCAG
CATCAGGGCGTGTTATTGCTGGTAAGAACGCCAAAGACGGTCAATTTCCT
TGGCAAGTAGCTATCTACAAGACAAATTGGAATTGGAATGAGGAAAGGGG
AGAACGTGTTAAAAGTACCATGTTTCAGTGTGGTGGATCATTGATTGCTC
CACAATGGGTTTTAACCGCAAGCCACTGCGTTTACAGAAGTTATGCCTAT
AAATTCAATGTCAGTATAGGAGTGACAAACCGAAAGACTGGATCCGTCCA
TGAGCAGAGAGTTGGTGTTGAGAAATTTTTCACCCATCCACAATACAAGA
AGCACATCTCATTGAACAATGATCTTGCCCTGTTGAAGCTATCTTCACCC
ATTCGATTGAGTGATTATCGATCTACTGTTTGTTTACCTGGTCAAGGACA
ACAAGTGCCGGTTGGAACGAAATGCTTTATCTCAGGCTGGGGTAAAACGA
GTGACAAGCCGTTTACAGTGGACCACTTGCAACATGCACCGTTGCGCATT
CTGTCCAATGAAGTCTGTTATAAGCGACAATGGAGATTAAATGAAATCAC
AGACAAAATGGTTTGCGCATCCGCCGGTCGTGGTTGTCCACAATCTGGTT
GTCAAGGTGATTCAGGCGGCCCGCTTACATGTCAACAACCAAACGGTAGT
TGGATTCAACATGGCGTGGTTAGCTACGGGTCGCCATACTGCGACACTAA
AGAAGCGAGTACAGTTTTCACACGTGTATCGGAATTTAAAGATTGGATCG
ATAGTATTATGCAGAATTGAGACGAAAATAATGTATTAGCATCTGGTTGT
CAAGGTGATTCTGGTGGTCCTCTGATGTGTCAAGATTCGCATGGGGCATG
GAAACTACACGGTGTAGTGAGTTGGGGATCATCGAGCTGTCACACCAAAT
ACAAGTATACCACTTTCACCAGAATGTCCATGTATCGATACTTCATCAAT
GATACTCTTGGCTTGACCAACAAACCGTCTCTTCCACCACCACCCAAGGg
GGGCTGTGATGCCGACGTATCGAGCCAAGATGCGTTCCTTTTGAAAAGTT
TATACTCTTCATCTACCAATCCAACGTGTGGGCAATCTGCGCCAGCATCA
GGGCGTGTTATTGCTGGTAAGAACGCCAAAGACGGTCAATTTCCTTGGCA
AGTAGCTATCTACAAGACAAATTGGAATTGGAATGAGGAAAGGGGAGAAC
GTGTTAAAAGTACCATGTTTCAGTGTGGTGGATCATTGATTGCTCCACAA
TGGGTTTTAACCGCAAGCCACTGCGTTTACAGAAGTTATGCCTATAAATT
CAATGTCAGTATAGGAGTGACAAACCGAAAGACTGGATCCGTCCATGAGC
AGAGAGTTGGTGTTGAGAAATTTTTCACCCATCCACAATACAAGAAGCAC
ATCTCATTGAACAATGATCTTGCCCTGTTGAAGCTATCTTCACCCATTCG
ATTGAGTGATTATCGATCTACTGTTTGTTTACCTGGTCAAGGACAACAAG
TGCCGGTTGGAACGAAATGCTTTATCTCAGGCTGGGGTAAAACGAGTGAC
AAGCCGTTTACAGTGGACCACTTGCAACATGCACCGTTGCGCATTCTGTC
CAATGAAGTCTGTTATAAGCGACAATGGAGATTAAATGAAATCACAGACA
AAATGGTTTGCGCATCCGCCGGTCGTGGTTGTCCACAATCTGGTTGTCAA
GGTGATTCAGGCGGCCCGCTTACATGTCAACAACCAAACGGTAGTTGGAT
TCAACATGGCGTGGTTAGCTACGGGTCGCCATACTGCGACACTAAAGAAG
CGAGTACAGTTTTCACACGTGTATCGGAATTTAAAGATTGGATCGATAGT
ATTATGCAGAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001919XLOC_001919Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003442-proteinTCONS_00003442-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003442-exon-sc0000028-1491911889:561033..561124TCONS_00003442-exon-sc0000028-1491911889:561033..561124Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:561033..561124TCONS_00003442-exon-sc0000028-1510915933:561033..561124Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:561033..561124TCONS_00003442-exon-sc0000028-1575043694:561033..561124Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:561653..561790TCONS_00003442-exon-sc0000028-1491911889:561653..561790Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:561653..561790TCONS_00003442-exon-sc0000028-1510915933:561653..561790Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:561653..561790TCONS_00003442-exon-sc0000028-1575043694:561653..561790Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:562341..562370TCONS_00003442-exon-sc0000028-1491911889:562341..562370Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:562341..562370TCONS_00003442-exon-sc0000028-1510915933:562341..562370Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:562341..562370TCONS_00003442-exon-sc0000028-1575043694:562341..562370Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:562958..563151TCONS_00003442-exon-sc0000028-1491911889:562958..563151Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:562958..563151TCONS_00003442-exon-sc0000028-1510915933:562958..563151Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:562958..563151TCONS_00003442-exon-sc0000028-1575043694:562958..563151Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:564112..564202TCONS_00003442-exon-sc0000028-1491911889:564112..564202Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:564112..564202TCONS_00003442-exon-sc0000028-1510915933:564112..564202Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:564112..564202TCONS_00003442-exon-sc0000028-1575043694:564112..564202Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:565817..566032TCONS_00003442-exon-sc0000028-1491911889:565817..566032Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:565817..566032TCONS_00003442-exon-sc0000028-1510915933:565817..566032Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:565817..566032TCONS_00003442-exon-sc0000028-1575043694:565817..566032Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1491911889:573940..574392TCONS_00003442-exon-sc0000028-1491911889:573940..574392Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1510915933:573940..574392TCONS_00003442-exon-sc0000028-1510915933:573940..574392Clytia hemisphaericaexon
TCONS_00003442-exon-sc0000028-1575043694:573940..574392TCONS_00003442-exon-sc0000028-1575043694:573940..574392Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:561033..574392 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.16494 1.10158 0.319759 0.195521 0.238028 0.300949 0.408468 0.50987 0.237981 0.294778 0.107295 0.235104 5.98682 5.60783 6.89555 20.1994 14.6548 17.8727 24.9548 23.3253 43.6539 47.5967 98.1941 110.211 86.1877 92.6158 0.242025 0.361614 0.0783632 0.279439
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
Blast
BLAST of TCONS_00003442 vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.544e-49
Identity = 103/281 (36.65%), Postives = 144/281 (51.25%), Query Frame = 2
Query:  266 FLLKSLYSSSTNPTCGQSA--PASGRVIAGKNAKDGQFPWQVAI-YKTNWNWNEERGERVKSTMFQCGGSLIAPQWVLTASHCVYRSYAYKFNVSIGVTNRKTGSVHEQRVGVEKFFTHPQYKKH-ISLNNDLALLKLSSPIRLSDYRSTVCLPGQGQQVPVGTKCFISGWGKTSDKPFTVDHLQHAPLRILSNEVCYKRQWRLNEITDKMVCASAGRGCPQSGCQGDSGGPLTCQQPNGSWIQHGVVSYGSPY-CDTKEASTVFTRVSEFKDWIDSIMQN 1093
             LL +L + +   +CG     P   RV+ G+ A+   +PWQV++ Y +N  W              CGGSLIA  WVLTA+HC+  S  Y+  V +G  N          V V K   H  +  + IS  ND+ALLKL++P+ L+D     CLP  G  +P    C+++GWG+        D LQ   L ++    C    W  + +   M+CA  G G   S C GDSGGPL CQ  +G W  HG+VS+GS   C+     +VFTRVS + DWI+S++ N
Sbjct:    5 LLLSTLVAGAL--SCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKW-----------YHTCGGSLIANSWVLTAAHCISSSRTYR--VGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICA-GGDGVISS-CNGDSGGPLNCQASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVIAN 268          
The following BLAST results are available for this feature:
BLAST of TCONS_00003442 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A2.544e-4936.65Chymotrypsin-like elastase family member 2A OS=Hom... [more]
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