Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003435 ID=TCONS_00003435|Name=TCONS_00003435|organism=Clytia hemisphaerica|type=transcript|length=2698bpRun BLAST on NCBI transcript from alignment at sc0000028:520312..528285+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00003435 ID=TCONS_00003435|Name=TCONS_00003435|organism=Clytia hemisphaerica|type=transcript|length=7974bp|location=Sequence derived from alignment at sc0000028:520312..528285+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00003435 vs. Swiss-Prot (Human)
Match: GBB4 (Guanine nucleotide-binding protein subunit beta-4 OS=Homo sapiens GN=GNB4 PE=1 SV=3) HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0 Identity = 280/341 (82.11%), Postives = 309/341 (90.62%), Query Frame = 1 Query: 370 MSDLDALRQEAENLKNQIRDARKVAQDTNFASAAANVEAINRIQLRTRRTLRGHLAKIYAMHWASDSRSLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAQSGNYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDSQILTSSGDTTCCLWDIETGQQLTSFIGHTGDVMSISLCNDDNRTFVSGACDASAKVWDIRTGMCTQTFTGHESDINAVSYFPSNSAFGTGSDDATCRLFDIRSDQEMMCYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNAWDTLKGERAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRVWN 1392 MS+L+ LRQEAE L+NQI+DARK D +N++++ RIQ+RTRRTLRGHLAKIYAMHW DSR LVSASQDGKLI+WDSYTTNK+HAIPLRSSWVMTCAYA SGNYVACGGLDNICSIY+LKTREGNVRVSRELPGHTGYLSCCRFLDDSQI+TSSGDTTC LWDIET QQ T+F GH+GDVMS+SL + D RTFVSGACDAS+K+WDIR GMC Q+FTGH SDINAVS+FP+ AF TGSDDATCRLFD+R+DQE++ YSHDNIICGITSVAFSKSGRLLLAGYDDFNCN WDTLKG+RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLR+WN Sbjct: 1 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSL-SPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340 The following BLAST results are available for this feature:
BLAST of TCONS_00003435 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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