TCONS_00003435 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003435
Unique NameTCONS_00003435
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2698

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003435 ID=TCONS_00003435|Name=TCONS_00003435|organism=Clytia hemisphaerica|type=transcript|length=2698bp
ACTCGCGCGGCagttgtatttttttcataCGGTAATTTCATTGGCTCGTC
CGCAAAATGTTTTGGTAGAGTATTCACGAACACTCCCTGACAAGAGGATA
GCCATCTTGGGAAAAGTGGTCTGTTTAGAATATATTTatggttttatttt
gatatataGCGTGTTTTAGAAGGCATAAATAGAAAGATTGGATGTTACAT
TACGCTGAGAAGTTGTTTTTCTGAAGAAAATATTCGTTTGCGATGgtgtt
tttttgagaaaatgtttcgGTTTTTTATGATGAAGCTTGGAGTGCCTTTA
TTTTCATAATAGATATTAATTATCTTGGATATTCGTTTTGATATTAggca
aaataaataataatacaaGATGTCTGATTTGGATGCTTTGAGGCAAGAAG
CTGAAAATCTTAAGAATCAAATCAGGGATGCAAGAAAAGTTGCGCAAGAT
ACCAACTTTGCTTCAGCGGCTGCAAATGTTGAAGCCATCAACAGGATACA
ACTTCGAACCAGGCGTACCCTTCGTGGTCATTTAGCCAAAATTTATGCCA
TGCACTGGGCCTCTGACTCAAGGAGTCTGGTCAGTGCTTCTCAAGATGGT
AAACTTATTGTATGGGATTCTTACACAACAAACAAGGTTCATGCTATCCC
ATTGAGATCAAGTTGGGTCATGACATGTGCTTATGCTCAATCAGGAAACT
ACGTAGCTTGTGGTGGACTTGATAATATCTGCTCCATATACAGTTTAAAA
ACACGAGAAGGAAATGTTCGTGTAAGCAGAGAACTTCCAGGACATacagG
ATATTTGTCTTGTTGTCGGTTTTTGGACGACTCTCAGATCTTAACCAGTT
CAGGAGATACTACCTGttGTTTATGGGATATTGAAACTGGTCAACAACTT
ACTTCATTTATTGGACACACCGGAGATGTAATGAGCATCTCACTATGTAA
TGATGACAACAGAACGTTTGTTTCTGGTGCTTGTGATGCCTCTGCAAAGG
TTTGGGATATCCGAACTGGAATGTGCACACAAACATTTACTGGGCATGAA
TCAGATATCAATGCTGTTTCTtatttcccaagcaacagTGCTTTTGGTAC
TGGATCTGATGACGCCACTTGTAGATTATTTGATATCCGTTCAGATCAAG
AAATGATGTGCTATTCTCATGACAACATTATTTGCGGTATCACCTCCGTT
GCATTCTCCAAGAGTGGTCGATTATTACTTGCTGGTTATGATGACTTCAA
CTGCAATGCTTGGGATACGCTGAAAGGTGAAAGAGCTGGTGTCCTTGCTG
GACATGACAATAGGGTTAGCTGTTTGGGTGTTACCGACGATGGTATGGCT
GTAGCAACCGGTAGTTGGGATAGTTTCCTTAGAGTATGGAATTagacaaa
ttttttcaattcataaaTCAGCTGCATTTTTTCATCCTCTCCTTAACTTA
CTAAGTCAATGAAAACGAGAACTTATTGATCACTGGAGAATGACATGGTG
AGCAAAGGAATGAATTTGCAGAATTTTTATGTGAACCAATATAAGATGTG
ATGGAGTTGTTGGCAAAATGATGACATTTTGCTGGACCCTCgctgcaaaa
tttaagaacctGGATGAAATTAATAATAGCTGTATTTAACatgaaatgat
gaaaattaCAAAACGAGGAGGCTTGGGACTAAAGAGAGGAATGCTCCAAT
ACGAAAAGCTTCTCTTTTGGCacgaaatcaacaaaaaattagTCGAAAAA
TTATCACGAGATATTTTATGTGGATACTATAAAGTGATGaagaaagagaa
gagaaaaatttcagaatattttacttttatcatttttttttgtttttgat
tttagagGAAATTTGTAGGTTATTACGGCATATCAGTATAAATCCACATT
CATCTCTTCGTTTGCAATCATTGACTCTCGACGGCCAAATTTGAATTAGA
TCTTTCGATCATTCTATACAATACAGTCTGTGATTCTTGGAAACGGAAAA
ATCTAAGGCTAGATTACTCAATGATTGTAAATATTAACTATTTTTCGGTT
TTTTTCCTATGTTGGTTTTTTcttatgattattttttttatgcGTGAATC
AAATTTTATTAGAGAGAACTCACCTCCGTTGGTATTAATTTATATTAGTG
TTTAGCTAACCATTTGTGTGTAgcaaatatttttcactttcctCACAGCA
TATCCAAAGAAAAGAGAAGTATCTTCTGTTTTAAGTTTGAAAGATTCTTA
ACCTTCTAAAATTAACTAAAACTTCAAGTTTTGTGTCATCTCCATTTTAA
CTCGTTGATTACGGGTTCAAGTAATGAACTATACTTAGAAAAGCGTATAA
TGATGTTTTCTTACTAGTCAATGGATTATACATTACCTATGGGACTATTT
TCTCTAAATCTTTTGTACATTTTGCAGATGGATCAGTTTCTAAATAAGTA
TGATTTTTTGGCAAAGAGATAACCAGCTTAAAAACACTCATTCGATTCTT
CATATAggcttcaaattttatttttgtaagcCTACAAAAAATTACTTCTT
TCAATATTTAAAGGCATTTAGCAAGATCAGAGAGATTTTAGAAGTACAAT
TTCTATTATGAGGGATATTTTACTTATTAGAAACATAACAACTAgaataa
attgtaaattttctttgaaCAAATACGTGTAAGTATACACTAAAACAT
Run BLAST on NCBI

transcript from alignment at sc0000028:520312..528285+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003435 ID=TCONS_00003435|Name=TCONS_00003435|organism=Clytia hemisphaerica|type=transcript|length=7974bp|location=Sequence derived from alignment at sc0000028:520312..528285+ (Clytia hemisphaerica)
ACTCGCGCGGCagttgtatttttttcataCGGTAATTTCATTGGCTCGTC CGCAAAATGTTTTGGTAGAGTATTCACGAACACTCCCTGACAAGAGGATA GCCATCTTGGGAAAAGTGGTCTGTTTAGAATATATTTatggttttatttt gatatataGCGTGTTTTAGAAGGCATAAATAGAAAGATTGGATGTTACAT TACGCTGAGAAGTTGTTTTTCTGAAGAAAATATTCGTTTGCGATGgtgtt tttttgagaaaatgtttcgGTTTTTTATGATGAAGCTTGGAGTGCCTTTA TTTTCATAATAGATATTAATTATCTTGGATATTCGTTTTGATATTAggca aaataaataataatacaaGATGTCTGATTTGGATGCTTTGAGGCAAGAAG CTGAAAATCTTAAGAATCAAATCAGGGTAAGCTTTATTTTTACTGATGTT CACTTTTATCACTCTTCCTGCTCGGCTCTATTTTCAATTAGCAAGTCGGT TTTCAGGATAGGTGTTTTCGAGCGCGTTTTGCTGTCACGTGATAACAGCA GCTGCGTGCGTCTTTTACACTGAAATCTCTAAACGAAAGAATATTGATCA CGTGTCATCACAATCGAATCTTTGTTCACAGCTGTCTCTCTCTTCACGAA AGAAAGTCAAAATGGCTGCCGTAAACTGTTCGGATAAAATTATATCGCTT TGATCAAAGTTCAAGAATTCTCTGCTTTGTCTTTCCCCACCCATTTTATT AAATTCTCTgcaaaaactttaaacttttggGAACTTCCTCAATTTTTAAA CCAAACACATTCAACAGTAAAAGGAATGCTGATGTTTTAAAAGCTGTCTG GGAGAATCTGTCTTTTAAAACCAATccatttttgtaatatttttaaagaG ATTTTTAAGATATCTCTTATTTATCCAGAATCCTTCCCCAAGCTTTCATA AGCTGTTGTAATACACTAAGTTATTATTGTACAGTGTTGCAAAAAACCGT TGGTGATGACTGGTATAGCTGGTACTTTTTGGTTTCAACTGgtcattttt aagtttaaattTTACTTTGGTGGGGTAAAAACATGAGATTGCCTGTTTCA GaagttttatatatatttttttttgtatcatCTCATAATGGGCCATTCTA TTTTTTATCTGTTAGCCCCCAACAAACGACATGAAATTTCCGTGGAAGAC GGCGTTTGTccacggaagaatatttcaatgaattagaaaaaagcccgcgc ggtcagcgattctataaaaagcgaccgcgcgggctgtctggggcatccag ggtagtctctcaaaaacaaataatacggaccccgggcacgcatcaaaaaa aacccggactgtccggggcataggcagggtcgtcaaatttacaaaatacc gtGGAATTCGGATACTgcaacctaaaaaaatcatgagATTCCAATACTTT TATGCAAGATTAAGTAATATTCATGGAACTCTGATATTTATCTCTGATGT CGTCCATTTAGGgagtaatgtttttttttctggaatggcccaatcatTAG GAGCACCCCTAGACCCCAAGCTTTCTTTTTTCTCGCTATGGTAAAAAAAT TTGTCCGAAttgtattttgaataaaatacaGTACGCAGAAACGCTGCAAA AAAGGTTTCAAACACTACAGCTATTTTTATGTGAAAGTCTGATTGTATGA TTGAATATTTATTCTATATCAAATTTTAGGATGCAAGAAAAGTTGCGCAA GATACCAACTTTGCTTCAGTaagatttgttttatttttcattcattcttt tATTCATTTCTACATTGCAATGAAAATATAATAGAAAAGATAAATTAAAG TCTGCATGACATGTTTCCATAATAGTGACTCTTATTCTTATTAAAACTGA TTTTAGGCGGCTGCAAATGTTGAAGCCATCAACAGGATACAACTTCGAAC CAGGCGTACCCTTCGTGGTCATTTAGCCAAAATTTATGCCATGCACTGGG CCTCTGACTCAAGgtaacattttctttggagcTTGGTATTCTTGTTAAAg agataaattaaaaaattgaaaatactttagaaaagaaaatttgattgcTC CCTAATGTAAAAAGACATTTACAAATTTTATTCTTGTAGTTGAATCATAG TCATTATGAAAAACCCTGGTCTGTAaggcttttaaattgatttgttttgc atagTTTTTGATCATGTGGTTATAAGATTAACTGATCCCAAGAGTAAACA ATGGTAATGTGAtcaaaaattatgcaaatcgcaacttgcctTTTATTTAC AACAAAGGAAAAGTTGATTACCAGAccaatgttttttataatgactatgg ttgAATTTAGATCAATCAGTTAATATGATTTCCTAAAAATCTtaagaaaa tgaatttgaagTTAAATCGTTTGGTGTATTTCTCATTACTGATTCTTTTG CAATTTAGGAGTCTGGTCAGTGCTTCTCAAGATGGTAAACTTATTGTATG GGATTCTTACACAACAAACAAGGTAAAAAATCCCTTATTATGTTTTTTAC TGTAtcaattatttttgtttgattttcgaGCCTTTATTTAGTTTCATAAT AGGTACCCTTTTTAGAAAAGTCCTCTCCTTACTCTAATATAATGAATAGT CGATAGAAAGGGAATAAAATACAAGAATAGATAATATACAAATTCAAACA CCTGGTCATCTTTTTGCACTTGCAAAAGCAAATACTTTTTAACTTTACAA AATCTTTTAACTTTTCAAGAATCAGATCCTCCCCCTCcagtttacttttt tattgccTGAATAAAAGTATACTCTCTGTCTcctaaagaaaaattgaata ggAAAGCTTTTACATTTTGTCTGTATTTCATTCATAAATCAATAAAGTGC AATCTCAAATTGACTTTATTTTCAGGTTCATGCTATCCCATTGAGATCAA GTTGGGTCATGACATGTGCTTATGCTCAATCAGGAAACTACGTAGCTTGT GGTGGACTTGATAATATCTGCTCCATATACAGTTTAAAAACACGAGAAGG AAATGTTCGTGTAAGCAGAGAACTTCCAGGACATacaggtaatttttttt attcttcaacCAGCTAACAGCTAGTAGAGTACAAAATTATTTTGCAAAAG GTTAAATTGTAAGCTCGTCTATGAACATTTGTTAcaatttgtattttgtt tttccattttcatGAGAGATACATTCTACATGCACTTTTTAGGATATTTG TCTTGTTGTCGGTTTTTGGACGACTCTCAGATCTTAACCAGTTCAGGAGA TACTACCTGGTAAGTCATCATTTTTTGCCAGTTATTAATTCTCTGAGGTG ACTAATAATCAAGTTTCTTAACAGGACGCCTAAGTAAGTTACATCTCTCT TAGAAATCAAATcaagaaattacaaaataataTCTCATCAAAACACNatg ttttttataatgactatggttgAATTTAGATCAATCAGTTAATATGATTT CCTAAAAATCTtaagaaaatgaatttgaagTTAAATCGTTTGGTGTATTT CTCATTACTGATTCTTTTGCAATTTAGGAGTCTGGTCAGTGCTTCTCAAG ATGGTAAACTTATTGTATGGGATTCTTACACAACAAACAAGGTAAAAAAT CCCTTATTATGTTTTTTACTGTAtcaattatttttgtttgattttcgaGC CTTTATTTAGTTTCATAATAGGTACCCTTTTTAGAAAAGTCCTCTCCTTA CTCTAATATAATGAATAGTCGATAGAAAGGGAATAAAATACAAGAATAGA TAATATACAAATTCAAACACCTGGTCATCTTTTTGCACTTGCAAAAGCAA ATACTTTTTAACTTTACAAAATCTTTTAACTTTTCAAGAATCAGATCCTC CCCCTCcagtttacttttttattgccTGAATAAAAGTATACTCTCTGTCT cctaaagaaaaattgaataggAAAGCTTTTACATTTTGTCTGTATTTCAT TCATAAATCAATAAAGTGCAATCTCAAATTGACTTTATTTTCAGGTTCAT GCTATCCCATTGAGATCAAGTTGGGTCATGACATGTGCTTATGCTCAATC AGGAAACTACGTAGCTTGTGGTGGACTTGATAATATCTGCTCCATATACA GTTTAAAAACACGAGAAGGAAATGTTCGTGTAAGCAGAGAACTTCCAGGA CATacaggtaattttttttattcttcaacCAGCTAACAGCTAGTAGAGTA CAAAATTATTTTGCAAAAGGTTAAATTGTAAGCTCGTCTATGAACATTTG TTAcaatttgtattttgtttttccattttcatGAGAGATACATTCTACAT GCACTTTTTAGGATATTTGTCTTGTTGTCGGTTTTTGGACGACTCTCAGA TCTTAACCAGTTCAGGAGATACTACCTGGTAAGTCATCATTTTTTGCCAG TTATTAATTCTCTGAGGTGACTAATAATCAAGTTTCTTAACAGGACGCCT AAGTAAGTTACATCTCTCTTAGAAATCAAATcaagaaattacaaaataat aTCTCATCAAAACACTAACCAATCATTCCAATGAAAAGCTTGTCTAATTA AAAGCAATCATCAAAAATATGATGAGAACTACTGGATGGTTTGTGTTTTA TCAGGAACTGCTTAGAGACTTAAAATATCTaccaatgtttttttctttta aattttagttGTTTATGGGATATTGAAACTGGTCAACAACTTACTTCATT TATTGGACACACCGGAGATGTAATGAGCATCTCACTATGTAATGATGACA ACAGAACGTTTGTTTCTGGTGCTTGTGATGCCTCTGCAAAGGTAAGTGAA ACTAAAGCAACATTGAAGCTGGGTGTCCACTGAAAAAAGTTCATCGTAAT TACCTGttgacaaaaaataaatccagactggaattaaaaaacgttttttt tgtgACAGAAGGAAAAATACAGTGATCAAAGTTCCTCCTTCTTCCTTCTC ACAGgaatttttgtcaaagtttttcgTCTCATTTAGAAATGGTTATTTAG CAAGAAATAGTGATTTTATTCTCTAGAATAATTCCATCAGAAAGAAATCT TGTATTAAAACTGTGTTTATGGCTGATGGTCTTGACGTTCatatatgtat ttttttttcaacctatTTTAGATAGATAAATATTTTCTCTGTATGATAGG CATTTTAAGAGCATTCTGAGTTGTTTTAAATTGACAAATTTTAGTGCTTT TCTAGCCAATCTAGGGGGTAAAAAATCTGAAGATTTTCTGACCCTCTACC ctaaccatggtggggcctgcaGGTATCACTGTATACCAAAATATCTCtat caagaaattttccgtctcacagaaaaaaaaactgaccactgaaaataata atCGATGTagaatgaaaacgttttcatttttcatcgtCGTATTTTTTCAC CCTATCGCAAATAAAGCAAAAGGTTTTTAATTCCAGACATGcgtctggat ttattttttgtcaaCAGGTATTTGCGATGAACTTAACATTACTTTACACC ACACAATTTTGAGAAGTGCTTTTTAAATACATATATACTAAGTACCTCTG AGCATAGGATTACAATATAATATTAGGTGCAGATTGTTTGccagttttga ttattttacctCTTTCCTATAGGTTTGGGATATCCGAACTGGAATGTGCA CACAAACATTTACTGGGCATGAATCAGATATCAATGCTGTTTCTGTAAGT ACACAGTATttaaagatattattttatGTATAGAAAGGAGGTGCATCCTC TATGCTGTTAAAGTAGAATAGGCACTACCAAAAAGGGAGAAAgttgttct ttattttcttgcattttcttTGACTTCCATTTCtacatttgactttttga aaggCTTTCTTTCTTCTCTCAAAAGGAATTGAAACAAGCTTGAACTCTGT GTTGGATTCTGTTTTACAATTGtatattttcttcctttcagtatttccca agcaacagTGCTTTTGGTACTGGATCTGATGACGCCACTTGTAGATTATT TGATATCCGTTCAGATCAAGTGAGTTTTTTAAATCATCTTTTTATtaaca aacaagaaaaattctgTCTGAATGAGAATGAtgtaaaagaaagaaagaag gaaGGATGATCCCTGCAATATGAACAGTATGGGCCCTAGAGTTAACTATT CTAGGAAAGGGAAATCATACCTGACACCATTGACCTTGTGCTCGCGGCAC AACAGAGCCATGGTGTATCAGTGACATTACTCAAGCAAGCATACCTTATA TCTGAGTAGGGTACCAATCTGCTGTGTAGAAGCATAACTTTCTCATTGAG CTGTATTCGATATTATTAAGTATTGTATTTTATTGGCTCTTGCTCTGAAC TAATTAATTAACCTTTGTTTTACAGGAAATGATGTGCTATTCTCATGACA ACATTATTTGCGGTATCACCTCCGTTGCATTCTCCAAGAGTGGTCGATTA TTACTTGCTGGTTATGATGACTTCAACTGCAATGCTTGGGATACGCTGAA AGGTGAAAGAGCTGGTGTCCTTGCTGGACATGACAATAGGGTTAGCTGTT TGGGTGTTACCGACGATGGTATGGCTGTAGCAACCGGTAGTTGGGATAGT TTCCTTAGAGTATGGAATTagacaaattttttcaattcataaaTCAGCTG CATTTTTTCATCCTCTCCTTAACTTACTAAGTCAATGAAAACGAGAACTT ATTGATCACTGGAGAATGACATGGTGAGCAAAGGAATGAATTTGCAGAAT TTTTATGTGAACCAATATAAGATGTGATGGAGTTGTTGGCAAAATGATGA CATTTTGCTGGACCCTCgctgcaaaatttaagaacctGGATGAAATTAAT AATAGCTGTATTTAACatgaaatgatgaaaattaCAAAACGAGGAGGCTT GGGACTAAAGAGAGGAATGCTCCAATACGAAAAGCTTCTCTTTTGGCacg aaatcaacaaaaaattagTCGAAAAATTATCACGAGATATTTTATGTGGA TACTATAAAGTGATGaagaaagagaagagaaaaatttcagaatattttac ttttatcatttttttttgtttttgattttagagGAAATTTGTAGGTTATT ACGGCATATCAGTATAAATCCACATTCATCTCTTCGTTTGCAATCATTGA CTCTCGACGGCCAAATTTGAATTAGATCTTTCGATCATTCTATACAATAC AGTCTGTGATTCTTGGAAACGGAAAAATCTAAGGCTAGATTACTCAATGA TTGTAAATATTAACTATTTTTCGGTTTTTTTCCTATGTTGGTTTTTTctt atgattattttttttatgcGTGAATCAAATTTTATTAGAGAGAACTCACC TCCGTTGGTATTAATTTATATTAGTGTTTAGCTAACCATTTGTGTGTAgc aaatatttttcactttcctCACAGCATATCCAAAGAAAAGAGAAGTATCT TCTGTTTTAAGTTTGAAAGATTCTTAACCTTCTAAAATTAACTAAAACTT CAAGTTTTGTGTCATCTCCATTTTAACTCGTTGATTACGGGTTCAAGTAA TGAACTATACTTAGAAAAGCGTATAATGATGTTTTCTTACTAGTCAATGG ATTATACATTACCTATGGGACTATTTTCTCTAAATCTTTTGTACATTTTG CAGATGGATCAGTTTCTAAATAAGTATGATTTTTTGGCAAAGAGATAACC AGCTTAAAAACACTCATTCGATTCTTCATATAggcttcaaattttatttt tgtaagcCTACAAAAAATTACTTCTTTCAATATTTAAAGGCATTTAGCAA GATCAGAGAGATTTTAGAAGTACAATTTCTATTATGAGGGATATTTTACT TATTAGAAACATAACAACTAgaataaattgtaaattttctttgaaCAAAT ACGTGTAAGTATACACTAAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001915XLOC_001915Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003435-exon-sc0000028-1491911889:520312..520737TCONS_00003435-exon-sc0000028-1491911889:520312..520737Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:520312..520737TCONS_00003435-exon-sc0000028-1510915933:520312..520737Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:520312..520737TCONS_00003435-exon-sc0000028-1575043694:520312..520737Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:522041..522079TCONS_00003435-exon-sc0000028-1491911889:522041..522079Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:522041..522079TCONS_00003435-exon-sc0000028-1510915933:522041..522079Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:522041..522079TCONS_00003435-exon-sc0000028-1575043694:522041..522079Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:522218..522324TCONS_00003435-exon-sc0000028-1491911889:522218..522324Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:522218..522324TCONS_00003435-exon-sc0000028-1510915933:522218..522324Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:522218..522324TCONS_00003435-exon-sc0000028-1575043694:522218..522324Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:523889..523952TCONS_00003435-exon-sc0000028-1491911889:523889..523952Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:523889..523952TCONS_00003435-exon-sc0000028-1510915933:523889..523952Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:523889..523952TCONS_00003435-exon-sc0000028-1575043694:523889..523952Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:524356..524518TCONS_00003435-exon-sc0000028-1491911889:524356..524518Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:524356..524518TCONS_00003435-exon-sc0000028-1510915933:524356..524518Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:524356..524518TCONS_00003435-exon-sc0000028-1575043694:524356..524518Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:524673..524739TCONS_00003435-exon-sc0000028-1491911889:524673..524739Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:524673..524739TCONS_00003435-exon-sc0000028-1510915933:524673..524739Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:524673..524739TCONS_00003435-exon-sc0000028-1575043694:524673..524739Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:525020..525152TCONS_00003435-exon-sc0000028-1491911889:525020..525152Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:525020..525152TCONS_00003435-exon-sc0000028-1510915933:525020..525152Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:525020..525152TCONS_00003435-exon-sc0000028-1575043694:525020..525152Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:525984..526055TCONS_00003435-exon-sc0000028-1491911889:525984..526055Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:525984..526055TCONS_00003435-exon-sc0000028-1510915933:525984..526055Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:525984..526055TCONS_00003435-exon-sc0000028-1575043694:525984..526055Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:526303..526380TCONS_00003435-exon-sc0000028-1491911889:526303..526380Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:526303..526380TCONS_00003435-exon-sc0000028-1510915933:526303..526380Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:526303..526380TCONS_00003435-exon-sc0000028-1575043694:526303..526380Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1491911889:526737..528285TCONS_00003435-exon-sc0000028-1491911889:526737..528285Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1510915933:526737..528285TCONS_00003435-exon-sc0000028-1510915933:526737..528285Clytia hemisphaericaexon
TCONS_00003435-exon-sc0000028-1575043694:526737..528285TCONS_00003435-exon-sc0000028-1575043694:526737..528285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:520312..528285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.9986 28.9865 41.3188 42.5145 142.151 107.351 117.976 124.406 92.0315 94.1663 63.0611 57.5065 48.2729 41.6161 35.8296 38.0337 67.7628 65.3419 37.5379 52.7135 65.1419 65.4919 40.9134 45.1722 33.1417 38.6171 68.7274 56.6065 44.7344 43.7043
Blast
BLAST of TCONS_00003435 vs. Swiss-Prot (Human)
Match: GBB4 (Guanine nucleotide-binding protein subunit beta-4 OS=Homo sapiens GN=GNB4 PE=1 SV=3)

HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0
Identity = 280/341 (82.11%), Postives = 309/341 (90.62%), Query Frame = 1
Query:  370 MSDLDALRQEAENLKNQIRDARKVAQDTNFASAAANVEAINRIQLRTRRTLRGHLAKIYAMHWASDSRSLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAQSGNYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDSQILTSSGDTTCCLWDIETGQQLTSFIGHTGDVMSISLCNDDNRTFVSGACDASAKVWDIRTGMCTQTFTGHESDINAVSYFPSNSAFGTGSDDATCRLFDIRSDQEMMCYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNAWDTLKGERAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRVWN 1392
            MS+L+ LRQEAE L+NQI+DARK   D       +N++++ RIQ+RTRRTLRGHLAKIYAMHW  DSR LVSASQDGKLI+WDSYTTNK+HAIPLRSSWVMTCAYA SGNYVACGGLDNICSIY+LKTREGNVRVSRELPGHTGYLSCCRFLDDSQI+TSSGDTTC LWDIET QQ T+F GH+GDVMS+SL + D RTFVSGACDAS+K+WDIR GMC Q+FTGH SDINAVS+FP+  AF TGSDDATCRLFD+R+DQE++ YSHDNIICGITSVAFSKSGRLLLAGYDDFNCN WDTLKG+RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLR+WN
Sbjct:    1 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSL-SPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340          
The following BLAST results are available for this feature:
BLAST of TCONS_00003435 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GBB40.000e+082.11Guanine nucleotide-binding protein subunit beta-4 ... [more]
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