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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003412 ID=TCONS_00003412|Name=TCONS_00003412|organism=Clytia hemisphaerica|type=transcript|length=4029bp
CagcattaaaaaaaacaataccaATTATGGAAGATAAAAAcagagaaaaa
gagcaaaagAAAATCATAGTGGTCGGAGCTGGATTAGTAGGATCATTACA
GGCTTTATATTTCGCACAACGATCATACAACGTACAAGTTTACGAATACA
GGCCTGATCCACGAACCCAGGCTAATGTCGCTGGTCGTAGTATCAATTTA
GCCTTATCCAAGCGTGGTCGGGAAGCGTTAAAAGGGGTTGGTGCCGAGGA
GCATGTTGTTAAGACTGGGATCCCAATGCATTCCCGTATGATTCATTCTC
ACGATGGGAAACAGTCGGCGATTCCTTATGGGAAAAAGCATCAATACATC
CTATCCATCGATCGTAGAGCGTTAAATGAGCATTTAATTAGCTTAGTGGA
GAAACATCCCAATGTTGATTTCCATTTTGATTCGAAATGTGTTGATGCCA
ATATCAAAAACACCGAGGTGACTTTTCAGGATAAGGAAAGTAAAGTGGAT
TCTATTGAGCAAGGAGATTTGATTGTTGGATGTGATGGTTCTTTTTCTGG
CATCAGAAAACAACTCATGAAATTGAACAGAATGAATTATTCTCAGgTAT
ATATACCACATGGTTACAAAGAAATCGAAATGCCACCAGGATCAGATGGT
GATTTCATAATGGCTCCCAATTATCTTCACATCTGGCCACGTGGTACATT
CATGATGATTGCCTTacccaatcaaaacaaaacattcacGTGTACTTTGT
TCATGCCCTACGCCATttttgatcaaatcaaaaccGAAGAAGACATCATG
GCTTTTTTCGAACGTGAATTCCCTGACTCAATTCCTTTGATTGGCAAAGA
GAAAATCATCTCGGACTACAAGACCAATCCGGTTGGTGATTTAATCAGTG
TTAAATGCTCACCTTACCATTATCAAGATAAATGTGTTATTGTTGGAGAT
GCTGCTCATGCAATGGTGCCTTTCTACGGTCAGGGAATGAATTGTGGATT
TGAAGATTGTCTGGTGCTACATCAAATCCTTGATAAACACAATGGTGATT
TTATGGCTGGTTTGGAAGAATATTCGAGAACAAGAAACCCAGATGCTGAA
GCAATCATTGATCTGGCAATGTATAATTATTTAGAAATGAGGGATCATGT
CAATTCTAAATTATATGtcttaagaaaatattttgatggttttttgaaTT
GGATTTTACCAAGGCACTGGATTCCATTGTATACAATGACCACATTCACC
AGAATTCCTTACCATAAAGTTATcgagaaaagtaaaaaacaagATCAAAT
TGTCCAGAAACTTATAACTGGTATCAAAGTCCTTAGTTTGATTGGTATCT
CTGTGATTGTTTATCAGAGGAGGGAAAATATTCCACCGTTGGTTAAAGAC
TTTTCAGTATTCGCGGCAAATGTTCAGGATACTTTAAAAggtatttttta
aatgcatattGGATCTTCATTTATGATGCTCACAATTTTTAGCATTTACA
ATATTTTTACTCTTTCCTAGAAACTAATATGTATGGTAAACTCTAGTAAA
atattaagcagttattggacaaagtcgaatccaatatatgcaaaaatatt
gggcgtgccagaaaagatattggacgaggcTTCGCCGAGTCTAATAACTG
CTTATTATTATCCGGACATTTGTTCAGGTATGCTGCGAAGAACAGCGaca
cattatttttttaaataccttCTCActccatggaagctatatatttaaaa
atattggacatcaaagaagccaatcaaatgtcgctatttacgcgcgtcgg
ataataattttctttatgattAGGTATATTATCTATGAATTATAAAAAAG
caagaaatttgaaatgacTAACTTAGGTGTATTTGAAACACGGTATAATT
AATTATGACTACGacagaaaaaattacaaaatcgaaaaaacaatttttta
aacacTAGTAAAAATATTTACGATTTTATATTTGCTGAAATAGATTTTAG
GATATTTTCGATATCCGCTGTATGAAGTTCAAGTTCGTCTGTATTCATTT
TACCAGAGTATATCCCTCTATATAGGGTTTGAATCAAGAGTTCATTTGAA
AAGCTGATTCTTCTGCAATACGACATAATCTTTGGTGAGGTCAGCTTTGG
TTCAACTAATTTACTTATGGATAACATTCGAAGCACATTAATAGATTTCT
TCAGGATCTTCATACTCTCTAATGCTGATTGATAGAACATAACTTTAAAA
GTTAATTTCCTGTTACATATCTGCCTCCAAAGTCTATTCAAAATAACATT
CGAATTCGATTCTGTTAACACTTCCATCAATCGTTTTTCCTTCACTGATA
GGATAGGCATGAATGCATATTCCTTTGTGCTCTGTTGACATCCATTACCA
TGTTCATTAAAGGGTGTTGTGCAATTCCAACAAAACCCTTCGTTTGAGCA
AATACACATCATTACATAGCAACCACCGTTTTTCTCAATGAATTTCCCAC
ATCGTGGACAGTGTTTACCACGAACGTTCGTCTTCAAAACACGCCCTGTT
GAATCAATATTACCGTATTTCACTAACCTTTCAGTAAGCGTATTAAGTTT
AGCATATGTTCGACAGGATAAAGGCCAATGTGTTGTTTTCTTGCAGGTGA
AACACCATGACCGATGACATTTTCCACATTGGACCTCCAATGTTCTTGAC
AGGATCTCCGAAGCTTTAGGAACGTGAGGGATTAATGATTCATCTACAAT
AACAACATGCTTGCAAAAATTATTAGGGCATGATTCtatgtttttagatt
tctgtataAGCTGTTTGGTGTAACCTTTGATATAAACGTTAAACAAATCC
CAAGTTACTTTAGATAGTAAAGTAACAACATCGATAACCGACTCGCATTT
ATAAGCAAGGCATGTAATGTTTTTGGTTGATCTATTGGTGATTTTGGATT
TGAAGTATTCTTCCCAGCATTCATTGCAGAATAAATGTCCACATTTGTTA
AGCGTGGTGGTGTACGTTTCAGAGGAAATCTCGTTGAAACAATTCGAGCA
TTCTGTTGCTGTTGGAAACAAGGAGCTGCTGTATTCAGCCTGGTCATAAT
GGTAGAAACCTGAATCAATGATAAGTTGTGATTCTGATTTTGTGCtgatt
ttttcatcttcattttttaaaggaATTGTCGGACCTTCAGTATCTCTTGT
TGATAACCCTGGATAGAACATATCAACAAAATTGTGGAAATACATTGGTT
CATCAACGGTAAATAATTCGAGCATATCCAGATCAAGGTCTCCATCAAAA
CCaagaaatgttactttaaaTGTTGAAATCGATTCTGACGTTGATTGaac
ttcaaacaaaatctttgaagaCATCGGATCAACTTCATTCATGATGATGA
ATTTTCTTTGCATTGTTTGTCCTTCAACATAGAATTGTCCATACACATCA
TGTAAAAGGTTTTGCTCAATACTGTCATTATTAAAAGTAACAATAACTGA
ATTGTCCACGTCAACATTATCTTCTTTATCTGATGATTCTTGGTAAATAG
ATGATACAGGAGCTTCGATCTCAAtgatatgtttttcttttggttCCACT
AATAGATTGCGGTTGAATTTACGCTTGGCTTTCTTTACCTTAGGGGTTGA
TTTGATTTcagaatctttctttaattttaaTTCCATCAAATTCAAATACT
GTTCTTTATATGAATATTCTATACCAAATTCTTCATCATCGGCATTAAAT
TCTGATTcctcactttcaaaatattgttcaTTTTCAAATACTTGATGGTC
AACGTTCTGCCTTAAGGTCATCGAGTTCTTTATACGAGGATCCCAGACTC
CTCCATACCGCCACTTTCCCCAGTTGTATTTCCTGTCTTTATGGTACTTT
CTCTTGAAATTTGATCCTCTGACTTCTGACTCGAGTTTGAACGGATATGT
TGCTGTCATACTTGGTTTTTTGATAATAAATTGGCAATCTGCGTCACTTT
CTCTGTCGCATCTGATATTGTTGGGTTTG Run BLAST on NCBI transcript from alignment at sc0000028:215899..220175+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003412 ID=TCONS_00003412|Name=TCONS_00003412|organism=Clytia hemisphaerica|type=transcript|length=4277bp|location=Sequence derived from alignment at sc0000028:215899..220175+ (Clytia hemisphaerica)
CagcattaaaaaaaacaataccaATTATGGAAGATAAAAAcagagaaaaa
gagcaaaagAAAATCATAGTGGTCGGAGCTGGATTAGTAGGATCATTACA
GGCTTTATATTTCGCACAACGATCATACAACGTACAAGTTTACGAATACA
GGCCTGATCCACGAACCCAGGCTAATGTCGCTGGTCGTAGTATCAATTTA
GCCTTATCCAAGCGTGGTCGGGAAGCGTTAAAAGGGGTTGGTGCCGAGGA
GCATGTTGTTAAGACTGGGATCCCAATGCATTCCCGTATGATTCATTCTC
ACGATGGGAAACAGTCGGCGATTCCTTATGGGAAAAAGCATCAATACATC
CTATCCATCGATCGTAGAGCGTTAAATGAGCATTTAATTAGCTTAGTGGA
GAAACATCCCAATGTTGATTTCCATTTTGATTCGAAATGTGTTGATGCCA
ATATCAAAAACACCGAGGTGACTTTTCAGGATAAGGAAAGTAAAGTGGAT
TCTATTGAGCAAGGAGATTTGATTGTTGGATGTGATGGTTCTTTTTCTGG
CATCAGAAAACAACTCATGAAATTGAACAGAATGAATTATTCTCAGGTAA
AAACCTTATGATGCTTAAAGAGTCCTCCTCACTACCTTATCAATCTTTTT
ACGCCGGTCCTAATTTAGAGCCAAAGCTTTTCAATTTTGAGCCCGGCCTT
AATTGAATTCCGATCCCTTACGCCAGCCCTTATTACACAAGCGACAAATA
ATAACACCGATATGCATCTCCCTGGTTTAGCTTACTAGGGGAAACATGTG
TTATTGTAAGTATCAAACAGTAAaatattttggttatttttaaggTATAT
ATACCACATGGTTACAAAGAAATCGAAATGCCACCAGGATCAGATGGTGA
TTTCATAATGGCTCCCAATTATCTTCACATCTGGCCACGTGGTACATTCA
TGATGATTGCCTTacccaatcaaaacaaaacattcacGTGTACTTTGTTC
ATGCCCTACGCCATttttgatcaaatcaaaaccGAAGAAGACATCATGGC
TTTTTTCGAACGTGAATTCCCTGACTCAATTCCTTTGATTGGCAAAGAGA
AAATCATCTCGGACTACAAGACCAATCCGGTTGGTGATTTAATCAGTGTT
AAATGCTCACCTTACCATTATCAAGATAAATGTGTTATTGTTGGAGATGC
TGCTCATGCAATGGTGCCTTTCTACGGTCAGGGAATGAATTGTGGATTTG
AAGATTGTCTGGTGCTACATCAAATCCTTGATAAACACAATGGTGATTTT
ATGGCTGGTTTGGAAGAATATTCGAGAACAAGAAACCCAGATGCTGAAGC
AATCATTGATCTGGCAATGTATAATTATTTAGAAATGAGGGATCATGTCA
ATTCTAAATTATATGtcttaagaaaatattttgatggttttttgaaTTGG
ATTTTACCAAGGCACTGGATTCCATTGTATACAATGACCACATTCACCAG
AATTCCTTACCATAAAGTTATcgagaaaagtaaaaaacaagATCAAATTG
TCCAGAAACTTATAACTGGTATCAAAGTCCTTAGTTTGATTGGTATCTCT
GTGATTGTTTATCAGAGGAGGGAAAATATTCCACCGTTGGTTAAAGACTT
TTCAGTATTCGCGGCAAATGTTCAGGATACTTTAAAAggtattttttaaa
tgcatattGGATCTTCATTTATGATGCTCACAATTTTTAGCATTTACAAT
ATTTTTACTCTTTCCTAGAAACTAATATGTATGGTAAACTCTAGTAAAat
attaagcagttattggacaaagtcgaatccaatatatgcaaaaatattgg
gcgtgccagaaaagatattggacgaggcTTCGCCGAGTCTAATAACTGCT
TATTATTATCCGGACATTTGTTCAGGTATGCTGCGAAGAACAGCGacaca
ttatttttttaaataccttCTCActccatggaagctatatatttaaaaat
attggacatcaaagaagccaatcaaatgtcgctatttacgcgcgtcggat
aataattttctttatgattAGGTATATTATCTATGAATTATAAAAAAGca
agaaatttgaaatgacTAACTTAGGTGTATTTGAAACACGGTATAATTAA
TTATGACTACGacagaaaaaattacaaaatcgaaaaaacaattttttaaa
cacTAGTAAAAATATTTACGATTTTATATTTGCTGAAATAGATTTTAGGA
TATTTTCGATATCCGCTGTATGAAGTTCAAGTTCGTCTGTATTCATTTTA
CCAGAGTATATCCCTCTATATAGGGTTTGAATCAAGAGTTCATTTGAAAA
GCTGATTCTTCTGCAATACGACATAATCTTTGGTGAGGTCAGCTTTGGTT
CAACTAATTTACTTATGGATAACATTCGAAGCACATTAATAGATTTCTTC
AGGATCTTCATACTCTCTAATGCTGATTGATAGAACATAACTTTAAAAGT
TAATTTCCTGTTACATATCTGCCTCCAAAGTCTATTCAAAATAACATTCG
AATTCGATTCTGTTAACACTTCCATCAATCGTTTTTCCTTCACTGATAGG
ATAGGCATGAATGCATATTCCTTTGTGCTCTGTTGACATCCATTACCATG
TTCATTAAAGGGTGTTGTGCAATTCCAACAAAACCCTTCGTTTGAGCAAA
TACACATCATTACATAGCAACCACCGTTTTTCTCAATGAATTTCCCACAT
CGTGGACAGTGTTTACCACGAACGTTCGTCTTCAAAACACGCCCTGTTGA
ATCAATATTACCGTATTTCACTAACCTTTCAGTAAGCGTATTAAGTTTAG
CATATGTTCGACAGGATAAAGGCCAATGTGTTGTTTTCTTGCAGGTGAAA
CACCATGACCGATGACATTTTCCACATTGGACCTCCAATGTTCTTGACAG
GATCTCCGAAGCTTTAGGAACGTGAGGGATTAATGATTCATCTACAATAA
CAACATGCTTGCAAAAATTATTAGGGCATGATTCtatgtttttagatttc
tgtataAGCTGTTTGGTGTAACCTTTGATATAAACGTTAAACAAATCCCA
AGTTACTTTAGATAGTAAAGTAACAACATCGATAACCGACTCGCATTTAT
AAGCAAGGCATGTAATGTTTTTGGTTGATCTATTGGTGATTTTGGATTTG
AAGTATTCTTCCCAGCATTCATTGCAGAATAAATGTCCACATTTGTTAAG
CGTGGTGGTGTACGTTTCAGAGGAAATCTCGTTGAAACAATTCGAGCATT
CTGTTGCTGTTGGAAACAAGGAGCTGCTGTATTCAGCCTGGTCATAATGG
TAGAAACCTGAATCAATGATAAGTTGTGATTCTGATTTTGTGCtgatttt
ttcatcttcattttttaaaggaATTGTCGGACCTTCAGTATCTCTTGTTG
ATAACCCTGGATAGAACATATCAACAAAATTGTGGAAATACATTGGTTCA
TCAACGGTAAATAATTCGAGCATATCCAGATCAAGGTCTCCATCAAAACC
aagaaatgttactttaaaTGTTGAAATCGATTCTGACGTTGATTGaactt
caaacaaaatctttgaagaCATCGGATCAACTTCATTCATGATGATGAAT
TTTCTTTGCATTGTTTGTCCTTCAACATAGAATTGTCCATACACATCATG
TAAAAGGTTTTGCTCAATACTGTCATTATTAAAAGTAACAATAACTGAAT
TGTCCACGTCAACATTATCTTCTTTATCTGATGATTCTTGGTAAATAGAT
GATACAGGAGCTTCGATCTCAAtgatatgtttttcttttggttCCACTAA
TAGATTGCGGTTGAATTTACGCTTGGCTTTCTTTACCTTAGGGGTTGATT
TGATTTcagaatctttctttaattttaaTTCCATCAAATTCAAATACTGT
TCTTTATATGAATATTCTATACCAAATTCTTCATCATCGGCATTAAATTC
TGATTcctcactttcaaaatattgttcaTTTTCAAATACTTGATGGTCAA
CGTTCTGCCTTAAGGTCATCGAGTTCTTTATACGAGGATCCCAGACTCCT
CCATACCGCCACTTTCCCCAGTTGTATTTCCTGTCTTTATGGTACTTTCT
CTTGAAATTTGATCCTCTGACTTCTGACTCGAGTTTGAACGGATATGTTG
CTGTCATACTTGGTTTTTTGATAATAAATTGGCAATCTGCGTCACTTTCT
CTGTCGCATCTGATATTGTTGGGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00003412-exon-sc0000028-1491911889:215899..216494 | TCONS_00003412-exon-sc0000028-1491911889:215899..216494 | Clytia hemisphaerica | exon |
| TCONS_00003412-exon-sc0000028-1510915933:215899..216494 | TCONS_00003412-exon-sc0000028-1510915933:215899..216494 | Clytia hemisphaerica | exon |
| TCONS_00003412-exon-sc0000028-1575043694:215899..216494 | TCONS_00003412-exon-sc0000028-1575043694:215899..216494 | Clytia hemisphaerica | exon |
| TCONS_00003412-exon-sc0000028-1491911889:216743..220175 | TCONS_00003412-exon-sc0000028-1491911889:216743..220175 | Clytia hemisphaerica | exon |
| TCONS_00003412-exon-sc0000028-1510915933:216743..220175 | TCONS_00003412-exon-sc0000028-1510915933:216743..220175 | Clytia hemisphaerica | exon |
| TCONS_00003412-exon-sc0000028-1575043694:216743..220175 | TCONS_00003412-exon-sc0000028-1575043694:216743..220175 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028 | supercontig | sc0000028:215899..220175 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00003412 vs. Swiss-Prot (Human)
Match: KMO (Kynurenine 3-monooxygenase OS=Homo sapiens GN=KMO PE=1 SV=2) HSP 1 Score: 481.871 bits (1239), Expect = 1.173e-155 Identity = 229/435 (52.64%), Postives = 308/435 (70.80%), Query Frame = 3
Query: 51 EQKKIIVVGAGLVGSLQALYFAQRSYNVQVYEYRPDPRTQANVAGRSINLALSKRGREALKGVGAEEHVVKTGIPMHSRMIHSHDGKQSAIPYGKKHQYILSIDRRALNEHLISLVEKHPNVDFHFDSKCVDANIKNTEVTFQDKESKVDSIEQGDLIVGCDGSFSGIRKQLMKLNRMNYSQVYIPHGYKEIEMPPGSDGDFIMAPNYLHIWPRGTFMMIALPNQNKTFTCTLFMPYAIFDQIKTEEDIMAFFEREFPDSIPLIGKEKIISDYKTNPVGDLISVKCSPYHYQDKCVIVGDAAHAMVPFYGQGMNCGFEDCLVLHQILDKHNGDFMAGLEEYSRTRNPDAEAIIDLAMYNYLEMRDHVNSKLYVLRKYFDGFLNWILPRHWIPLYTMTTFTRIPYHKVIEKSKKQDQIVQKLITGIKVL-SLIGIS 1352
++KK+ V+G GLVGSLQA + A+R++ + VYE R D R GRSINLALS RGR+ALK VG E+ +V GIPM +RMIHS GK+SAIPYG K QYILS+ R LN+ L++ EK+PNV HF+ + + N + +T + KV DLIVGCDG++S +R LMK R +YSQ YIPHGY E+ +PP +GD+ M PNYLHIWPR TFMMIALPN NK+FTCTLFMP+ F+++ T D++ FF++ FPD+IPLIG++ ++ D+ P +ISVKCS +H++ CV++GDAAHA+VPF+GQGMN GFEDCLV +++DK + D L +SR R PD AI DL+MYNY+EMR HVNS ++ +K + FL+ I+P +IPLYTM TF+RI YH+ +++ Q +++ K G+ L SLI IS
Sbjct: 7 QRKKVAVIGGGLVGSLQACFLAKRNFQIDVYEAREDTRVATFTRGRSINLALSHRGRQALKAVGLEDQIVSQGIPMRARMIHSLSGKKSAIPYGTKSQYILSVSRENLNKDLLTAAEKYPNVKMHFNHRLLKCNPEEGMITVLGSD-KVPKDVTCDLIVGCDGAYSTVRSHLMKKPRFDYSQQYIPHGYMELTIPP-KNGDYAMEPNYLHIWPRNTFMMIALPNMNKSFTCTLFMPFEEFEKLLTSNDVVDFFQKYFPDAIPLIGEKLLVQDFFLLPAQPMISVKCSSFHFKSHCVLLGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKFSNDLSLCLPVFSRLRIPDDHAISDLSMYNYIEMRAHVNSSWFIFQKNMERFLHAIMPSTFIPLYTMVTFSRIRYHEAVQRWHWQKKVINK---GLFFLGSLIAIS 436
The following BLAST results are available for this feature:
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