TCONS_00003411 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003411
Unique NameTCONS_00003411
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003411 ID=TCONS_00003411|Name=TCONS_00003411|organism=Clytia hemisphaerica|type=transcript|length=1136bp
TAgcaaaaaaataacataaagTAGAAACtaatattcgaaaaaaaaacaac
aaatgaaACGGTTGCCATTATGGAACATTTCCCCGTCACTTTGCTATCGT
AAATTGGTTACCATTGGCTAGCAGAAGAGAAAATTGGCACCGAACAGGGG
ATTTGCAAGGTGAATCATAAGACAGAAATCTGCTTTAGgTTTTGGCTAGA
ATCGAACTACTGTACAAGAAAGCTAGCATTCTTTTCTAGATAGAAtcata
agtttgaaaaaagtttaccCTAAACAAAAATGGCAAGTTTGAGAATCTCA
AATTATTGCACCAAGAAACATTCGGCTCAAGTTCAAACATTACTGGATAG
ATATTTAACACCAATGTATTGCCAGAGATTAAAGATACCTCTTAAAGACA
AATTGAAATATACAGATATTGAAGATTGCTTAGAATCTGATTCTGCATCG
AATCCAAAATTTGAGGGACAATCACATGTAGCTATTGATGAAAGCTCTGG
TAAACTTGTTGCTTGCCAGCTCAACTATTATGTCTCCAAAGCTATATTTA
AGAATGTTTTCATTGACTCCAATCAAAATATTGCTGGTGATTTATCCAAT
ACTATACGAGAAATATAATCTAGAGAAAATACTTTACATGGAAACCACAG
TTATTTTACCAGAATACAGACGTTTGAGAGTTCCAGATTTACTTCAAGAC
CCTGTATATGGGAATTATCCAAATGATGGGATTTTAGCTGAAGGAATGTT
GACTGTGGGTTCTTATTTAGCTGGCGGTTTGGAACAAAATAAACTGATCC
AATCTGTAAGGAGAGGTGAAATGATTTATTGTAAACGTGTTCTGTCACAT
GATGGATTTGTGGTACCAGTTGTTTTTAGACCTCCCTTATGTTGAATTCT
GACGAAACTGTCAAAACAATATTGGTTGAGGGctaagttttttattcttt
gtGATTTTTATACATAATTATTCTTTAACTGAACTTAACATGCTTAGTTT
ATCTACTTCTTGGTTTAAGACTTTAAAGCTTAAAAGTAatcatttctgaa
atctgagacTGGGGCTGTTCTTCATTTATTCTTAGAGTTTAACAAATACA
ATTCTCATGTTCTTAtaactttgttcttataaaaag
Run BLAST on NCBI

protein sequence of TCONS_00003411-protein

>TCONS_00003411-protein ID=TCONS_00003411-protein|Name=TCONS_00003411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MKALVNLLLASSTIMSPKLYLRMFSLTPIKILLVIYPILYEKYNLEKILY
METTVILPEYRRLRVPDLLQDPVYGNYPNDGILAEGMLTVGSYLAGGLEQ
NKLIQSVRRGEMIYCKRVLSHDGFVVPVVFRPPLC
Run BLAST on NCBI

transcript from alignment at sc0000028:117916..133643+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003411 ID=TCONS_00003411|Name=TCONS_00003411|organism=Clytia hemisphaerica|type=transcript|length=15728bp|location=Sequence derived from alignment at sc0000028:117916..133643+ (Clytia hemisphaerica)
TAgcaaaaaaataacataaagTAGAAACtaatattcgaaaaaaaaacaac
aaatgaaACGGTTGCCATTATGGAACATTTCCCCGTCACTTTGCTATCGT
AAATTGGTTACCATTGGCTAGCAGAAGAGAAAATTGGCACCGAACAGGTT
ATTATAAAgctcatttttttgaaattactaTTTCAGATATATTTAAAATT
GCTATTTcagatatttttgaaataactaTTTCAGATGAATGCGAGTCTAA
ACAATAGATTTACAATTTGCTGCCATTGTTTTCGATAACCTGCGGTGTCA
CGTGCACTATTTTTTTCATGTGCTTTTAATATTGTCCACTCAATTTAGTG
GAGTTAATCAGGAATGAGTACACGTTTTGTTCATAAAGAACATCCAaggt
ttttgaagccttcggatatttttaactttttgagttttaagcctaaaaat
gttcttaacatgttcttatcttCGCCATTTGTTGAGTATTATTCTGTATT
TTCCTAAGGAATAGGGCCTTttggagtccacaaagccttaaaatgttctt
aacttgttcttaatattttggccatcgaagcctaatgttcttatatagtt
tgttcttataaaaaaacttgtaaggAATCTAGTAGTTAGAAATCTTCGCC
TTGAAGAAAGtatattaagaaaaaaaactttgcccGCTTTTTGGAGACTG
TCATGACTTTTAGAATCTCCTAGAGAAACTAAATGATCGGTTCCATTTTA
ATTTGATTGTTTGCTTTTTAGGGGATTTGCAAGGTGAATCATAAGACAGA
AATCTGCTTTAGGTGAGAATGAACTATCTTATTTCTTacttgatttattt
ttgtctttcTATTCAACACAGGTAActccacagatatctgtaaagcccga
agggctagataggcaactttaagctttctccagcaaaaaaaagtgaagca
aaaatttgactttttaaatttcgtgccgatgNNNNNNNNNNNNNNNNNNN
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NNNNNNTTAGTCActtgactttggtaggaaatccttccaaacctaggctt
cacttttcgataaaagccgcaaatctagcccttcgggctttacagatctg
tgggtaACTCTTCAAGTCGGTTCGAGGTTCAACGATAGACCAttttataa
attacgtcacaaacatcacttgcttcGTATTCAAACATGGTGATCATACC
CCtagagacattaaatgatttttttatgaataggaagtagttttaaaaaa
atccgctgggagttaatcatcatggcaataatttcaaaacgaggcaagtg
atcttcgtaacgtaatttatgaaaaggtctattgtcttGATGTTTTACAT
TCACGATCTCGGTACACTTTTTCGATTGCGATCGCGGGATGTGACTGACT
GTATTACCAACCTTTACACCCATGATTTCGAAGACATAATAATTCTGTAT
TATTTAGATAAAGATAATCGAATGATTGTTAGCGACCCTTTTGGCTGACT
ACGCCGAGAtttccaaaaagttttattaGATTTCGACTGTTCCTTTTTCA
AATCGAGATTCCCTCTCCATCCCCTCTTGAAATTTCAACGAAAGGTTGGC
GTTATGGTCTGAATTTAAAATCATATTCCAGAATTTTTCGTGAATTTCAA
AATGTAATGCAATGAAAGCAAAGTGTATTCAAAGTTATAGTACTGTAAAC
ACCACAgcttacaatcatggacaaaaggtttgtagacttctgcaatattt
gcaaaatacttcaaagtctttcaaagtcacccactgcagtctaaccacaa
gggcttgatcaactggcttacaccagtatcaaaacgctgatttttttact
tgttgttccctcaaaagcaattcaaaagcaatgcaacgacttcaaaagtg
tttttcttaacttcccttCCCTTTCAGACACactgaagagtcattttgct
ttatttctcataatttttcgctgaaatttcatttgtctacaaccttttgt
ccatgattgtagcttTCTCTGAACTTTAAGCTGTGGAGACGGACTGTAAG
AATTGTATGTCTCTCAAATTACATAAATATCCAAAGAGTAGAAGATGAAG
AGCACATATCCCCATGTTAAGCTCAAGTAGATTATGTAATTTTCTGTTTC
AAGctattgaaaaaatgaaattgaagaagtgaaatttcagaaattttgta
aaaatttgtttagATTTTCGGAGCAGTGGAATCAGGGAAACCgtggaaag
tcttttttttacttgacctctaccaaacccttttaaacagataaaaatga
ctgGATAGATATtacaggctgacatatatgctcatgttatgtttaggaat
tctgcaaatctgagccttcatatgcttataagcgttatgcttataaaaaa
acatgtataaggtgtaattgaggtactttaggcgttatacccaattttta
ctaccttaacccctaaattgcttgaatttGAGTAATTTGAGGCTCAGCAT
ttgtcttaaattgttcttattttttggcgattttgagcctctttgttctt
ataaaattgttcttatataaaaaaagtgtagtcATTAATTAAGTTCAAGT
TCTCTTGAGTATCCCACAATCAGCAAactcaaatatttccttccagTCTT
GGTAACGGTGGTCTAAAAGTAACCACCACTATAAAATCATCATAAGATCG
AATATCTTTCAGAATCTCAAATCCATCCACACCAGGGACTGTTTGTTCCA
AAGTCTTTATTTTCCCTGTATCAACTAAATACTTTGGGGTTTGACTCTCT
GTCAAGATACCATATTTCGTGCCAAATTCCTCATAAGCTAACTTTTGGTT
TGCCTGACTTATTCCCATACGTCTATAATCCGGATGAACAATAGTACTTT
CGAAATAAATGAATTTCTCAAGTTGGTAGCGATCAAAAAGTTCATCAACT
CCTTTACAAACTTCATAACGATGTTGGGAATATTTTCGTACGCTTTCTTT
AAAGTTTTTGTTGTGAGCGCCTTCTTTACTAGAACCAATAAAGTCTTTTT
GCCAAGAAGGTTTATCCACAAAATAACTTAAGTGTAAACCAACCATATCA
CCTGATTGGTTCAAAGCCACTTTAGATGTTTGTTCATACCGAGGATCCAT
GATTGATTGTGGATCGAGAATATCCTCAAAGTCAGCGTATTTAGGCGCGT
CTTCATCTTTGATACCCATTCTTTGATAGTAGGTTGGTAGCAAATAATTA
TCGATCAGTTTTCGTGCTTGTTTTGCATGCTTTTGAATGTTATAAGATGC
AAACCTGAAACCTGCCATCTTAAagtcgttttttttttgtttcttaataT
CTAAAATAAAGTTGATAAAGAATTTAAAGGTTTTCACGATTGAATATTCC
GATGTACTATTGCTtagaaagaatcttttttgaCGCCTGAAAATTGGTCT
TCAGGGACTGATATCTTGgaaaaagcaaaatttctttcacAAAAGCTTAG
TTTTTTGAATAGCCCAAGTTATTTTGTGACCTCCAAGCAACCAGAAAGAA
ACTGTAGCCTCCATTAGCTTAAGTTCTTAGACCCTACTCCATCAGGGTTT
GGGGTATCACAAAAGAGACTCATACCCAACTAGCAAACATTCCAAACTAG
AAATTTTAATGATTCAATGATTGTACAACGTCTGGTTACAACTGCCAACT
GAGAGAACAGAGAAAATAATTAATTTGATTTAGTACAAGGTAAtgtttgc
taaaaaaataatatatctaagattaaattatttaattcatgatattcatg
acgtaatcattcatacggaagcacccgagataacccggagctagtggcaa
aataacaaaagactagtggcaaattttgccactagttccgagttattttg
tgtgcttccgtataaaagattacatcatgaatatcatgaattgtttaATT
CATTCAATGAATAATTTAAGGATTGAGAATTCTATCGTacaatgaaaaga
aatttatcaaTATGTGTATAATATCCTAATTGACAGTTAATTTACTTTTG
GAGGCCTAAACCATACTGGTACCATGACCTTATCATGAGTAACAATCTCT
TTCACTGTGagaaaaccattttcacgccAAGCATTGAAAGCTGGATTCAC
TTTCCCAGCATTGATTCGGTCCATAGGCACCATACCTTCACCTAATATCC
CATACTGCTCACCAAAGTCCCCTAAAACTGTTCTTTGCAACCACTGTGCT
ATCCTTAGACCGCGATATTCAGGCAATGTAACTCCATCTTCAAGGTAAAG
TATGGTCTGTAAATTATACTTATCATAAGTTAGATCAATAACATCATGAT
ATAGATCGTATTGTTGCTGACAATATTTTCGAATGTGTTTACTGTAATTT
GTATTTTGTGTAATGGATTTGTTAGGCTCTACAAAATATTTCAACCATTC
TTCTTTGcttataaaataatttaatgagCATGCAACCACTTTATCTGATT
TGTCCAAAGCTACATACGAAgccttttcaaatatttctctcTTCAAATGT
CCAGGATCCAAGATGGCTTCAACTTCAATTAaatctttcttttgttgttC
ACGAGTGATACCTAACCTTTTCATGTACGTTGGTAACAAATGCTTTGCCA
GAAGTTCAATAACTTGTTCAGAATGTTTTTCGATTATATACTTTGATTTT
CGTAAGCCTTGAACCATATTGTATGATGCAGCTACGCTGCGATTATTGTT
TATCTTATTATGTAATGTGGACGATATGAACATTCAAAGGAAGCTGTTTT
GACGCCAAATACTGTATTTCAGCTTTTCTTGACACTCGTACCAACCAGAC
TCCTCTAGAACCGGATTCAGccctaaaaatttaaaatcctaACATTGAAT
AACAATTTTGATAATAAAGTTGAACCAAGTTATTCCTTACTAACCATTGA
AGGTAATCTCAAAACTGGCACATTGCATCATTTCAACGTTAATACAACGT
TAATTGGACGTTATGGACATTAAAAAGACATTGTTTTGGCGTTCACAAAG
CTGAACTGCCAACcattaagtttaaaaaaatctgtaatATTCAAACACTA
TCCACTCTCTCTAGAAGGCTAtgtattataaaaataatcaaaccaAACAA
CCACAGTTTTAAGTCAAAGAGCATCTAGCTGACTTTATGTTCTTTTACCA
TACTTTCGTGTGGTTGTCAAATAAACAGAGAGACATTAATAGAAAGTGAC
AATAGTTGGATCAAATATCATAATAAAGTATCAAATGTACAAGTGGTGTG
CTACTAAAAAACTTGTTTTTGTGCAACAAAACTATATATTTAACTTGTAC
TTCTACCTTATGGAATTTAGAGAGTCAGTAGCAGGAGGCAAGGATAGACA
CAGTTGGTAGACATCATTTTTTGGCAGGTAATAATATTGGCTAGCTCTAA
AAGTTTTGGGGGAATTTTGTGTCTATCTGGCCCAAAATGTCTGAGAAAAC
GCACCTAGTAAGAGATTTTAAGAAGAACAACAGGGCTTGAATTGGGAGGA
TTGGAGATAGCGATGGTCGACCGTGAGCTGTGTCAGGAGGGTTATTGTAT
GTTCTCGAGCTATGTCTTCACAGACCTAGAGGTTTGTTGTACTATTTCTA
AACCTATTATTTATGAGTTAGTTAATCCAAATAGAAActtatacgcatgc
gtaatttatcgTCCTTTAAACCGCTAGTTGTTATAGCGTAAAGTACAAAA
AGTAATGGATATGTAAGGGTTGCAGACGGCGTTTGGGACGGCGAAATcgc
gaaatatgtcgttctttgatagttagggttagggtttgtcgttctttttg
tcgctttttaatagttatttgtcgttctttttagaNNNNNNNNNNNNNNN
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NNNNNNNGTTTACAATCTTGAGATTAATGTCGATAAATTCCTCCAGGTAT
TGTTGCTTGGTTACCAAGTAGCTTAATCCGAGACCAACGACTTTACCAGA
TTCATCTAAAACCACcacagaaaatttttcgaatttggAATCCTTTGCTA
AATTAGGATgtaaaatatcttcaacctcTGCATATTTCAATCTTTCATCT
TGTGTGATTCCCATACGTTTGTAATAAGTTGGTACTAAGTATTCGTCCAA
AAGTTTTTGTACTTCCCGAGAATGCTTTTCAATATTGTATTCCACGATTT
CCAAGCCTTCTATCTTGTTTTTGAATATCATCGTGATCGAATATTTTCCT
TTCCACTAAAAAAATGAATCCCTAATCTCTTCATTAATTTTAACAACTTT
ATACCATCGTTCAAGAACGTCAAGACGTGTTCCCTTCCTCttacgtcaaa
aaatgttaaCCTCAGAAATTAAAGTTattgttttgtattttgtataagaa
actttgtatttttataaaGGAATTACCCTCATTTATATACACTTCTCTTT
CATGCTTTTCAGCACGTTTATCCAATTTCCCATGCCTCTGGGAAGGCAAA
TTGAGAAATACAAATCAAGGGAGGTTGTTTACAATTTAGGGTGCCTAGGA
TGCTGCAATTCAAAGATATCTTCGTgttgtttattttgatattttaagaA
TAAGAATAGTACCCCAACCCAAGATTTTCCAGAACTAATAACTTTTCAGA
ATTATTAAGGAGACGAGTTTCTTTTTAATATTCTACCTTGTATAAGcaca
aaacaaacacaaaataaCCACAATCAAAACACACACTTCTTGAGAGAGGT
CAACATGAAGAAGTGGTATTTTCCATAAATGCTTGTAAATCAATTCGATT
TACGCAATCAAATATATTATGTCAGTTTGTTTGTTATGGTCAAAGTCCAA
TAAGTCGTCACAACATGATTTATGTGACTTAATGAGTGGTGTAGCTTAGA
AAAGTTTTGCTGTGTTTTCTAGTTTGTTTGGTTAATGCACAAATTCTATT
TTATGTTTATTTCAAACTCTTTCTACTAATTTTAACAAAGTTTTCTAAAA
TTGCCACTTTGATTTTGACGCCATTTCTTATAagtagattgaaaaatttc
agccGCACCACTTTTTTTCCCTTCCGTCCTTTGACTTCTGTCCGAGCTCT
GTAATTTGATTCATTTTTTACGGTTTTGCAATGTCATCAAATTTGTTGTC
GTTGTTTATCATAAAAATGCAAGCAAAGCTTTCTGATAATATAACGATAA
GGCTTTGGTATTGCATTTTTTATATATTGTTAAATGAACACTAACCATCA
AGATGGAATCGCTAAAGATACAAGGATTGGAAATCGTGGAATACAACATT
GAAAAGCATTCTCGGGAAGTTCAACAACTTTTGGACGAATATTTAGTACC
AACTTATTACAAACGTATGGGAATCACACAAGATGAAAGATTGAAATATG
CACATATTGAAGATATTTTACATCCTAATTTAGCGGAGGATCctaaattc
aataaattttcATTGGTAGCTGTTGAAAAGGATTCTGGAGAGGTTGTTGC
TTTGGGGTTGAGTTATCTAATAACAAAGCAAGAATTTCAAGAAGATTTTG
TGGATCTTAATAAGAGAATTTCAAATGACCAGAACTATAGTCCAGAAATA
CGAAAATATTGTCAACACAGATACTCTGTCTGCCACCCTATTCTCGAATA
TTACGATAAGTTTGGATTTGATGAACTTATTTACTTAGAAGATGTCGTGA
CCACTCGTAAATACCGTGGTTTGGGTGTACATGTTGCCATAATGGGCGTG
GCATTTGAGAAGTTTGGACACGAATACGGATTTCTCTCTGAAGGAATGGT
TCCGGTTGAAAAATTCATAACAGAAAAGAAGTTTCAAAATCATGAATGGA
GCCCTATAGGGACCTGGGTTTCAGACAGGTGGTATTTGGTTAATAAACAA
TTTTCTTATGATGGGTATATTTGTCCTGTCTTTATTTCTGGACCCGTACC
caaatcaaaactttaaatAGCAAAGCTTCCAGATTTTGGTAGGATGTTGA
TTTCTTCAAtaatttgtaatatttttttttaaagaaaattattttgaatt
taatgattGCGCAACCTTCAACCAAGTGGACTGCTCATCAATCGTTGAAA
TGATTGTTGGATGCTGGATATTGAAGTAGATCTACACgctttttgtataa
gaacaaaataaagaCATAATACTCGTTGCGGTGGTCATATTTTAAGGTTT
TACTAACTCTGAGGCGCCCATTGTCTtaggaaatttcgaaaatatccAGG
AATTCTATAAAATTTCGGTTAATATCCAGGGAAAGGGTGTGACTCGTGGG
AACTATTTTTATTTCAGGATGacccatttttataaaaacagcaattgaaa
agttttattttttattgtttagaaATCATTTTTTATGACATTGTACGAAA
AATCGTGTCACGCGTCACTATCGCCACTTACTCATGTCATGAATTGCATA
ACATCTTCAGATGTCTCTTGTAAAATAACTTCTGAAACCACTCTTCTTCT
AGAAACTacgttttgttgttttttattgttCATATTTTTGTCAAGACATA
ATGATACAAACTTTGTTATTTGATACACAACAAAACTTCTTCTTGTCTCT
AAGTTGTTTTTTCCTCAGTTTTTGGAAGGATGGTGGCTTGTTTGTTGTGT
TTATTACTggtaatttttgataaaatcttctGTAAAATGAATGTTAAACA
AAGCACATCCAGCTCGGGGGGATattagggttgcgagctgacgagggggg
ggggtgccgcccgactttcgacccttgggcctttaccgggactaaaaaga
agaaactaaaggaaaattttgtgaattttacgacccttatcgGGACTTCC
AGTaaatattagcgagtttatgtatttgcccttttgaggacggtaaagtg
actgaagcgatttggaataagaGTCGAGAACGGTGAAAGTGCCGATTTAa
cgtcgtcctcagtcaatcAGCATCTATAGTCAAATCAGAAGCTAATCGCC
CCCGTCGGAGAAAACACAGATACACAAACTGGGTATTGTTTGGACTCGGT
GGTTGTTCTTATATTTCTCCACCTTCAACCTCGCATTGTTCTGATAACCT
ACTGAAAAATTCGGCCAAGATTTGGTCCGCTGGTGGGAAAAATCTTCTTA
ATTAGATAATTATAGGTATTTTCATCCTAActgttggaaaaatttttcac
cGAAGCACTGAGACGGGTGTTTTAataatctgaggctcagattgttcata
ataattttatttcttttataggTTTTGGCTAGAATCGAACTACTGTACAA
GAAAGCTAGCATTCTTTTCTAGATAGAAtcataagtttgaaaaaagttta
ccCTAAACAAAAATGGCAAGTTTGAGAATCTCAAATTATTGCACCAAGAA
ACATTCGGCTCAAGTTCAAACATTACTGGATAGATATTTAACACCAATGT
ATTGCCAGAGATTAAAGATACCTCTTAAAGACAAATTGAAATATACAGAT
ATTGAAGATTGCTTAGAATCTGATTCTGCATCGAATCCAAAATTTGAGGG
ACAATCACATGTAGCTATTGATGAAAGCTCTGGTAAACTTGTTGCTTGCC
AGCTCAACTATTATGTCTCCAAAGCTATATTTAAGAATGTTTTCATTGAC
TCCAATCAAAATATTGCTGGTGATTTATCCAATAATGAgaacattcgaaa
atattgcCAACATCGATATGCTGTTTGCCACGATTTAATAGACCTATACG
AGAAATATAATCTAGAGAAAATACTTTACATGGAAACCACAGTTATTTTA
CCAGAATACAGACGTTTGAGAGTTCCAGATTTACTTCAAGACCCTGTATA
TGGGAATTATCCAAATGATGGGATTTTAGCTGAAGGAATGTTGACTGTGG
GTTCTTATTTAGCTGGCGGTTTGGAACAAAATAAACTGATCCAATCTGTA
AGGAGAGGTGAAATGATTTATTGTAAACGTGTTCTGTCACATGATGGATT
TGTGGTACCAGTTGTTTTTAGACCTCCCTTATGTTGAATTCTGACGAAAC
TGTCAAAACAATATTGGTTGAGGGctaagttttttattctttgtGATTTT
TATACATAATTATTCTTTAACTGAACTTAACATGCTTAGTTTATCTACTT
CTTGGTTTAAGACTTTAAAGCTTAAAAGTAatcatttctgaaatctgaga
cTGGGGCTGTTCTTCATTTATTCTTAGAGTTTAACAAATACAATTCTCAT
GTTCTTAtaactttgttcttataaaaag

Coding sequence (CDS) from alignment at sc0000028:117916..133643+

>TCONS_00003411 ID=TCONS_00003411|Name=TCONS_00003411|organism=Clytia hemisphaerica|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000028:117916..133643+ (Clytia hemisphaerica)
ATGAAAGCTCTGGTAAACTTGTTGCTTGCCAGCTCAACTATTATGTCTCC
AAAGCTATATTTAAGAATGTTTTCATTGACTCCAATCAAAATATTGCTGG
TGATTTATCCAATACTATACGAGAAATATAATCTAGAGAAAATACTTTAC
ATGGAAACCACAGTTATTTTACCAGAATACAGACGTTTGAGAGTTCCAGA
TTTACTTCAAGACCCTGTATATGGGAATTATCCAAATGATGGGATTTTAG
CTGAAGGAATGTTGACTGTGGGTTCTTATTTAGCTGGCGGTTTGGAACAA
AATAAACTGATCCAATCTGTAAGGAGAGGTGAAATGATTTATTGTAAACG
TGTTCTGTCACATGATGGATTTGTGGTACCAGTTGTTTTTAGACCTCCCT
TATGTTGAATGAAAGCTCTGGTAAACTTGTTGCTTGCCAGCTCAACTATT
ATGTCTCCAAAGCTATATTTAAGAATGTTTTCATTGACTCCAATCAAAAT
ATTGCTGGTGATTTATCCAATACTATACGAGAAATATAATCTAGAGAAAA
TACTTTACATGGAAACCACAGTTATTTTACCAGAATACAGACGTTTGAGA
GTTCCAGATTTACTTCAAGACCCTGTATATGGGAATTATCCAAATGATGG
GATTTTAGCTGAAGGAATGTTGACTGTGGGTTCTTATTTAGCTGGCGGTT
TGGAACAAAATAAACTGATCCAATCTGTAAGGAGAGGTGAAATGATTTAT
TGTAAACGTGTTCTGTCACATGATGGATTTGTGGTACCAGTTGTTTTTAG
ACCTCCCTTATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001905XLOC_001905Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003411-proteinTCONS_00003411-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003411-exon-sc0000028-1491911889:117916..118062TCONS_00003411-exon-sc0000028-1491911889:117916..118062Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1510915933:117916..118062TCONS_00003411-exon-sc0000028-1510915933:117916..118062Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1575043694:117916..118062TCONS_00003411-exon-sc0000028-1575043694:117916..118062Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1491911889:118687..118727TCONS_00003411-exon-sc0000028-1491911889:118687..118727Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1510915933:118687..118727TCONS_00003411-exon-sc0000028-1510915933:118687..118727Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1575043694:118687..118727TCONS_00003411-exon-sc0000028-1575043694:118687..118727Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1491911889:132637..133049TCONS_00003411-exon-sc0000028-1491911889:132637..133049Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1510915933:132637..133049TCONS_00003411-exon-sc0000028-1510915933:132637..133049Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1575043694:132637..133049TCONS_00003411-exon-sc0000028-1575043694:132637..133049Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1491911889:133109..133643TCONS_00003411-exon-sc0000028-1491911889:133109..133643Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1510915933:133109..133643TCONS_00003411-exon-sc0000028-1510915933:133109..133643Clytia hemisphaericaexon
TCONS_00003411-exon-sc0000028-1575043694:133109..133643TCONS_00003411-exon-sc0000028-1575043694:133109..133643Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:117916..133643 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.4333	12.6144	26.7798	28.7859	0.722559	0.40784	3.69031	4.88282	6.9339	5.03341	6.08755	4.0527	4.12342	4.86375	6.12838	8.53571	4.48193	9.12877	2.88853	2.89492	3.81132	3.30294	12.9889	11.8088	3.32833	5.0241	11.8075	6.27265	9.4727	7.44396
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003411 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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