XLOC_001905 (gene) - C. hemisphaerica

Overview
NameXLOC_001905
Unique NameXLOC_001905
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:117916..133643+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001905 ID=XLOC_001905|Name=XLOC_001905|organism=Clytia hemisphaerica|type=gene|length=15728bp|location=Sequence derived from alignment at sc0000028:117916..133643+ (Clytia hemisphaerica)
TAgcaaaaaaataacataaagTAGAAACtaatattcgaaaaaaaaacaac aaatgaaACGGTTGCCATTATGGAACATTTCCCCGTCACTTTGCTATCGT AAATTGGTTACCATTGGCTAGCAGAAGAGAAAATTGGCACCGAACAGGTT ATTATAAAgctcatttttttgaaattactaTTTCAGATATATTTAAAATT GCTATTTcagatatttttgaaataactaTTTCAGATGAATGCGAGTCTAA ACAATAGATTTACAATTTGCTGCCATTGTTTTCGATAACCTGCGGTGTCA CGTGCACTATTTTTTTCATGTGCTTTTAATATTGTCCACTCAATTTAGTG GAGTTAATCAGGAATGAGTACACGTTTTGTTCATAAAGAACATCCAaggt ttttgaagccttcggatatttttaactttttgagttttaagcctaaaaat gttcttaacatgttcttatcttCGCCATTTGTTGAGTATTATTCTGTATT TTCCTAAGGAATAGGGCCTTttggagtccacaaagccttaaaatgttctt aacttgttcttaatattttggccatcgaagcctaatgttcttatatagtt tgttcttataaaaaaacttgtaaggAATCTAGTAGTTAGAAATCTTCGCC TTGAAGAAAGtatattaagaaaaaaaactttgcccGCTTTTTGGAGACTG TCATGACTTTTAGAATCTCCTAGAGAAACTAAATGATCGGTTCCATTTTA ATTTGATTGTTTGCTTTTTAGGGGATTTGCAAGGTGAATCATAAGACAGA AATCTGCTTTAGGTGAGAATGAACTATCTTATTTCTTacttgatttattt ttgtctttcTATTCAACACAGGTAActccacagatatctgtaaagcccga agggctagataggcaactttaagctttctccagcaaaaaaaagtgaagca aaaatttgactttttaaatttcgtgccgatgNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTTAGTCActtgactttggtaggaaatccttccaaacctaggctt cacttttcgataaaagccgcaaatctagcccttcgggctttacagatctg tgggtaACTCTTCAAGTCGGTTCGAGGTTCAACGATAGACCAttttataa attacgtcacaaacatcacttgcttcGTATTCAAACATGGTGATCATACC CCtagagacattaaatgatttttttatgaataggaagtagttttaaaaaa atccgctgggagttaatcatcatggcaataatttcaaaacgaggcaagtg atcttcgtaacgtaatttatgaaaaggtctattgtcttGATGTTTTACAT TCACGATCTCGGTACACTTTTTCGATTGCGATCGCGGGATGTGACTGACT GTATTACCAACCTTTACACCCATGATTTCGAAGACATAATAATTCTGTAT TATTTAGATAAAGATAATCGAATGATTGTTAGCGACCCTTTTGGCTGACT ACGCCGAGAtttccaaaaagttttattaGATTTCGACTGTTCCTTTTTCA AATCGAGATTCCCTCTCCATCCCCTCTTGAAATTTCAACGAAAGGTTGGC GTTATGGTCTGAATTTAAAATCATATTCCAGAATTTTTCGTGAATTTCAA AATGTAATGCAATGAAAGCAAAGTGTATTCAAAGTTATAGTACTGTAAAC ACCACAgcttacaatcatggacaaaaggtttgtagacttctgcaatattt gcaaaatacttcaaagtctttcaaagtcacccactgcagtctaaccacaa gggcttgatcaactggcttacaccagtatcaaaacgctgatttttttact tgttgttccctcaaaagcaattcaaaagcaatgcaacgacttcaaaagtg tttttcttaacttcccttCCCTTTCAGACACactgaagagtcattttgct ttatttctcataatttttcgctgaaatttcatttgtctacaaccttttgt ccatgattgtagcttTCTCTGAACTTTAAGCTGTGGAGACGGACTGTAAG AATTGTATGTCTCTCAAATTACATAAATATCCAAAGAGTAGAAGATGAAG AGCACATATCCCCATGTTAAGCTCAAGTAGATTATGTAATTTTCTGTTTC AAGctattgaaaaaatgaaattgaagaagtgaaatttcagaaattttgta aaaatttgtttagATTTTCGGAGCAGTGGAATCAGGGAAACCgtggaaag tcttttttttacttgacctctaccaaacccttttaaacagataaaaatga ctgGATAGATATtacaggctgacatatatgctcatgttatgtttaggaat tctgcaaatctgagccttcatatgcttataagcgttatgcttataaaaaa acatgtataaggtgtaattgaggtactttaggcgttatacccaattttta ctaccttaacccctaaattgcttgaatttGAGTAATTTGAGGCTCAGCAT ttgtcttaaattgttcttattttttggcgattttgagcctctttgttctt ataaaattgttcttatataaaaaaagtgtagtcATTAATTAAGTTCAAGT TCTCTTGAGTATCCCACAATCAGCAAactcaaatatttccttccagTCTT GGTAACGGTGGTCTAAAAGTAACCACCACTATAAAATCATCATAAGATCG AATATCTTTCAGAATCTCAAATCCATCCACACCAGGGACTGTTTGTTCCA AAGTCTTTATTTTCCCTGTATCAACTAAATACTTTGGGGTTTGACTCTCT GTCAAGATACCATATTTCGTGCCAAATTCCTCATAAGCTAACTTTTGGTT TGCCTGACTTATTCCCATACGTCTATAATCCGGATGAACAATAGTACTTT CGAAATAAATGAATTTCTCAAGTTGGTAGCGATCAAAAAGTTCATCAACT CCTTTACAAACTTCATAACGATGTTGGGAATATTTTCGTACGCTTTCTTT AAAGTTTTTGTTGTGAGCGCCTTCTTTACTAGAACCAATAAAGTCTTTTT GCCAAGAAGGTTTATCCACAAAATAACTTAAGTGTAAACCAACCATATCA CCTGATTGGTTCAAAGCCACTTTAGATGTTTGTTCATACCGAGGATCCAT GATTGATTGTGGATCGAGAATATCCTCAAAGTCAGCGTATTTAGGCGCGT CTTCATCTTTGATACCCATTCTTTGATAGTAGGTTGGTAGCAAATAATTA TCGATCAGTTTTCGTGCTTGTTTTGCATGCTTTTGAATGTTATAAGATGC AAACCTGAAACCTGCCATCTTAAagtcgttttttttttgtttcttaataT CTAAAATAAAGTTGATAAAGAATTTAAAGGTTTTCACGATTGAATATTCC GATGTACTATTGCTtagaaagaatcttttttgaCGCCTGAAAATTGGTCT TCAGGGACTGATATCTTGgaaaaagcaaaatttctttcacAAAAGCTTAG TTTTTTGAATAGCCCAAGTTATTTTGTGACCTCCAAGCAACCAGAAAGAA ACTGTAGCCTCCATTAGCTTAAGTTCTTAGACCCTACTCCATCAGGGTTT GGGGTATCACAAAAGAGACTCATACCCAACTAGCAAACATTCCAAACTAG AAATTTTAATGATTCAATGATTGTACAACGTCTGGTTACAACTGCCAACT GAGAGAACAGAGAAAATAATTAATTTGATTTAGTACAAGGTAAtgtttgc taaaaaaataatatatctaagattaaattatttaattcatgatattcatg acgtaatcattcatacggaagcacccgagataacccggagctagtggcaa aataacaaaagactagtggcaaattttgccactagttccgagttattttg tgtgcttccgtataaaagattacatcatgaatatcatgaattgtttaATT CATTCAATGAATAATTTAAGGATTGAGAATTCTATCGTacaatgaaaaga aatttatcaaTATGTGTATAATATCCTAATTGACAGTTAATTTACTTTTG GAGGCCTAAACCATACTGGTACCATGACCTTATCATGAGTAACAATCTCT TTCACTGTGagaaaaccattttcacgccAAGCATTGAAAGCTGGATTCAC TTTCCCAGCATTGATTCGGTCCATAGGCACCATACCTTCACCTAATATCC CATACTGCTCACCAAAGTCCCCTAAAACTGTTCTTTGCAACCACTGTGCT ATCCTTAGACCGCGATATTCAGGCAATGTAACTCCATCTTCAAGGTAAAG TATGGTCTGTAAATTATACTTATCATAAGTTAGATCAATAACATCATGAT ATAGATCGTATTGTTGCTGACAATATTTTCGAATGTGTTTACTGTAATTT GTATTTTGTGTAATGGATTTGTTAGGCTCTACAAAATATTTCAACCATTC TTCTTTGcttataaaataatttaatgagCATGCAACCACTTTATCTGATT TGTCCAAAGCTACATACGAAgccttttcaaatatttctctcTTCAAATGT CCAGGATCCAAGATGGCTTCAACTTCAATTAaatctttcttttgttgttC ACGAGTGATACCTAACCTTTTCATGTACGTTGGTAACAAATGCTTTGCCA GAAGTTCAATAACTTGTTCAGAATGTTTTTCGATTATATACTTTGATTTT CGTAAGCCTTGAACCATATTGTATGATGCAGCTACGCTGCGATTATTGTT TATCTTATTATGTAATGTGGACGATATGAACATTCAAAGGAAGCTGTTTT GACGCCAAATACTGTATTTCAGCTTTTCTTGACACTCGTACCAACCAGAC TCCTCTAGAACCGGATTCAGccctaaaaatttaaaatcctaACATTGAAT AACAATTTTGATAATAAAGTTGAACCAAGTTATTCCTTACTAACCATTGA AGGTAATCTCAAAACTGGCACATTGCATCATTTCAACGTTAATACAACGT TAATTGGACGTTATGGACATTAAAAAGACATTGTTTTGGCGTTCACAAAG CTGAACTGCCAACcattaagtttaaaaaaatctgtaatATTCAAACACTA TCCACTCTCTCTAGAAGGCTAtgtattataaaaataatcaaaccaAACAA CCACAGTTTTAAGTCAAAGAGCATCTAGCTGACTTTATGTTCTTTTACCA TACTTTCGTGTGGTTGTCAAATAAACAGAGAGACATTAATAGAAAGTGAC AATAGTTGGATCAAATATCATAATAAAGTATCAAATGTACAAGTGGTGTG CTACTAAAAAACTTGTTTTTGTGCAACAAAACTATATATTTAACTTGTAC TTCTACCTTATGGAATTTAGAGAGTCAGTAGCAGGAGGCAAGGATAGACA CAGTTGGTAGACATCATTTTTTGGCAGGTAATAATATTGGCTAGCTCTAA AAGTTTTGGGGGAATTTTGTGTCTATCTGGCCCAAAATGTCTGAGAAAAC GCACCTAGTAAGAGATTTTAAGAAGAACAACAGGGCTTGAATTGGGAGGA TTGGAGATAGCGATGGTCGACCGTGAGCTGTGTCAGGAGGGTTATTGTAT GTTCTCGAGCTATGTCTTCACAGACCTAGAGGTTTGTTGTACTATTTCTA AACCTATTATTTATGAGTTAGTTAATCCAAATAGAAActtatacgcatgc gtaatttatcgTCCTTTAAACCGCTAGTTGTTATAGCGTAAAGTACAAAA AGTAATGGATATGTAAGGGTTGCAGACGGCGTTTGGGACGGCGAAATcgc gaaatatgtcgttctttgatagttagggttagggtttgtcgttctttttg tcgctttttaatagttatttgtcgttctttttagaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TGTTGCTTGGTTACCAAGTAGCTTAATCCGAGACCAACGACTTTACCAGA TTCATCTAAAACCACcacagaaaatttttcgaatttggAATCCTTTGCTA AATTAGGATgtaaaatatcttcaacctcTGCATATTTCAATCTTTCATCT TGTGTGATTCCCATACGTTTGTAATAAGTTGGTACTAAGTATTCGTCCAA AAGTTTTTGTACTTCCCGAGAATGCTTTTCAATATTGTATTCCACGATTT CCAAGCCTTCTATCTTGTTTTTGAATATCATCGTGATCGAATATTTTCCT TTCCACTAAAAAAATGAATCCCTAATCTCTTCATTAATTTTAACAACTTT ATACCATCGTTCAAGAACGTCAAGACGTGTTCCCTTCCTCttacgtcaaa aaatgttaaCCTCAGAAATTAAAGTTattgttttgtattttgtataagaa actttgtatttttataaaGGAATTACCCTCATTTATATACACTTCTCTTT CATGCTTTTCAGCACGTTTATCCAATTTCCCATGCCTCTGGGAAGGCAAA TTGAGAAATACAAATCAAGGGAGGTTGTTTACAATTTAGGGTGCCTAGGA TGCTGCAATTCAAAGATATCTTCGTgttgtttattttgatattttaagaA TAAGAATAGTACCCCAACCCAAGATTTTCCAGAACTAATAACTTTTCAGA ATTATTAAGGAGACGAGTTTCTTTTTAATATTCTACCTTGTATAAGcaca aaacaaacacaaaataaCCACAATCAAAACACACACTTCTTGAGAGAGGT CAACATGAAGAAGTGGTATTTTCCATAAATGCTTGTAAATCAATTCGATT TACGCAATCAAATATATTATGTCAGTTTGTTTGTTATGGTCAAAGTCCAA TAAGTCGTCACAACATGATTTATGTGACTTAATGAGTGGTGTAGCTTAGA AAAGTTTTGCTGTGTTTTCTAGTTTGTTTGGTTAATGCACAAATTCTATT TTATGTTTATTTCAAACTCTTTCTACTAATTTTAACAAAGTTTTCTAAAA TTGCCACTTTGATTTTGACGCCATTTCTTATAagtagattgaaaaatttc agccGCACCACTTTTTTTCCCTTCCGTCCTTTGACTTCTGTCCGAGCTCT GTAATTTGATTCATTTTTTACGGTTTTGCAATGTCATCAAATTTGTTGTC GTTGTTTATCATAAAAATGCAAGCAAAGCTTTCTGATAATATAACGATAA GGCTTTGGTATTGCATTTTTTATATATTGTTAAATGAACACTAACCATCA AGATGGAATCGCTAAAGATACAAGGATTGGAAATCGTGGAATACAACATT GAAAAGCATTCTCGGGAAGTTCAACAACTTTTGGACGAATATTTAGTACC AACTTATTACAAACGTATGGGAATCACACAAGATGAAAGATTGAAATATG CACATATTGAAGATATTTTACATCCTAATTTAGCGGAGGATCctaaattc aataaattttcATTGGTAGCTGTTGAAAAGGATTCTGGAGAGGTTGTTGC TTTGGGGTTGAGTTATCTAATAACAAAGCAAGAATTTCAAGAAGATTTTG TGGATCTTAATAAGAGAATTTCAAATGACCAGAACTATAGTCCAGAAATA CGAAAATATTGTCAACACAGATACTCTGTCTGCCACCCTATTCTCGAATA TTACGATAAGTTTGGATTTGATGAACTTATTTACTTAGAAGATGTCGTGA CCACTCGTAAATACCGTGGTTTGGGTGTACATGTTGCCATAATGGGCGTG GCATTTGAGAAGTTTGGACACGAATACGGATTTCTCTCTGAAGGAATGGT TCCGGTTGAAAAATTCATAACAGAAAAGAAGTTTCAAAATCATGAATGGA GCCCTATAGGGACCTGGGTTTCAGACAGGTGGTATTTGGTTAATAAACAA TTTTCTTATGATGGGTATATTTGTCCTGTCTTTATTTCTGGACCCGTACC caaatcaaaactttaaatAGCAAAGCTTCCAGATTTTGGTAGGATGTTGA TTTCTTCAAtaatttgtaatatttttttttaaagaaaattattttgaatt taatgattGCGCAACCTTCAACCAAGTGGACTGCTCATCAATCGTTGAAA TGATTGTTGGATGCTGGATATTGAAGTAGATCTACACgctttttgtataa gaacaaaataaagaCATAATACTCGTTGCGGTGGTCATATTTTAAGGTTT TACTAACTCTGAGGCGCCCATTGTCTtaggaaatttcgaaaatatccAGG AATTCTATAAAATTTCGGTTAATATCCAGGGAAAGGGTGTGACTCGTGGG AACTATTTTTATTTCAGGATGacccatttttataaaaacagcaattgaaa agttttattttttattgtttagaaATCATTTTTTATGACATTGTACGAAA AATCGTGTCACGCGTCACTATCGCCACTTACTCATGTCATGAATTGCATA ACATCTTCAGATGTCTCTTGTAAAATAACTTCTGAAACCACTCTTCTTCT AGAAACTacgttttgttgttttttattgttCATATTTTTGTCAAGACATA ATGATACAAACTTTGTTATTTGATACACAACAAAACTTCTTCTTGTCTCT AAGTTGTTTTTTCCTCAGTTTTTGGAAGGATGGTGGCTTGTTTGTTGTGT TTATTACTggtaatttttgataaaatcttctGTAAAATGAATGTTAAACA AAGCACATCCAGCTCGGGGGGATattagggttgcgagctgacgagggggg ggggtgccgcccgactttcgacccttgggcctttaccgggactaaaaaga agaaactaaaggaaaattttgtgaattttacgacccttatcgGGACTTCC AGTaaatattagcgagtttatgtatttgcccttttgaggacggtaaagtg actgaagcgatttggaataagaGTCGAGAACGGTGAAAGTGCCGATTTAa cgtcgtcctcagtcaatcAGCATCTATAGTCAAATCAGAAGCTAATCGCC CCCGTCGGAGAAAACACAGATACACAAACTGGGTATTGTTTGGACTCGGT GGTTGTTCTTATATTTCTCCACCTTCAACCTCGCATTGTTCTGATAACCT ACTGAAAAATTCGGCCAAGATTTGGTCCGCTGGTGGGAAAAATCTTCTTA ATTAGATAATTATAGGTATTTTCATCCTAActgttggaaaaatttttcac cGAAGCACTGAGACGGGTGTTTTAataatctgaggctcagattgttcata ataattttatttcttttataggTTTTGGCTAGAATCGAACTACTGTACAA GAAAGCTAGCATTCTTTTCTAGATAGAAtcataagtttgaaaaaagttta ccCTAAACAAAAATGGCAAGTTTGAGAATCTCAAATTATTGCACCAAGAA ACATTCGGCTCAAGTTCAAACATTACTGGATAGATATTTAACACCAATGT ATTGCCAGAGATTAAAGATACCTCTTAAAGACAAATTGAAATATACAGAT ATTGAAGATTGCTTAGAATCTGATTCTGCATCGAATCCAAAATTTGAGGG ACAATCACATGTAGCTATTGATGAAAGCTCTGGTAAACTTGTTGCTTGCC AGCTCAACTATTATGTCTCCAAAGCTATATTTAAGAATGTTTTCATTGAC TCCAATCAAAATATTGCTGGTGATTTATCCAATAATGAgaacattcgaaa atattgcCAACATCGATATGCTGTTTGCCACGATTTAATAGACCTATACG AGAAATATAATCTAGAGAAAATACTTTACATGGAAACCACAGTTATTTTA CCAGAATACAGACGTTTGAGAGTTCCAGATTTACTTCAAGACCCTGTATA TGGGAATTATCCAAATGATGGGATTTTAGCTGAAGGAATGTTGACTGTGG GTTCTTATTTAGCTGGCGGTTTGGAACAAAATAAACTGATCCAATCTGTA AGGAGAGGTGAAATGATTTATTGTAAACGTGTTCTGTCACATGATGGATT TGTGGTACCAGTTGTTTTTAGACCTCCCTTATGTTGAATTCTGACGAAAC TGTCAAAACAATATTGGTTGAGGGctaagttttttattctttgtGATTTT TATACATAATTATTCTTTAACTGAACTTAACATGCTTAGTTTATCTACTT CTTGGTTTAAGACTTTAAAGCTTAAAAGTAatcatttctgaaatctgaga cTGGGGCTGTTCTTCATTTATTCTTAGAGTTTAACAAATACAATTCTCAT GTTCTTAtaactttgttcttataaaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003411TCONS_00003411Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003411-proteinTCONS_00003411-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:117916..133643 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.43 12.61 26.78 28.79 0.72 0.41 3.69 4.88 6.93 5.03 6.09 4.05 4.12 4.86 6.13 8.54 4.48 9.13 2.89 2.89 3.81 3.3 12.99 11.81 3.33 5.02 11.81 6.27 9.47 7.44