TCONS_00003292 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003292
Unique NameTCONS_00003292
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3061

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003292 ID=TCONS_00003292|Name=TCONS_00003292|organism=Clytia hemisphaerica|type=transcript|length=3061bp
gacattttaaaaacatgtttgtttgaatgaaaaaaatatttaaaaattaa
atttcgaaGAACAACTAGtcgaagaaataaaaaaagcttttcaaaacttt
tatctTTGAAATGTGATAAAACAGTTAAAATCATGATGATTTCCTACTTC
ATAATTGGTATTTCGTTAATACTTCTATCTATTTGCCGGACGTCCGAAAA
TGCAGCCTTGGGGTTTCGACCATGTGATCCAGAGAAGGACGGTCCAATGT
GCCATGTTGTCGGACAGTTCGGTGATCAATGTAATGAATTGAACCCATGT
GCACGTGGTCTATATTGCAAACGGAGGTCACATGCATCCTACTATTGCGA
TAATGGTGTAGAGGAGACACACCGAAGCTTAAAACACCTTCTTTCTGGCT
GTCTCAACAATTTTACATCAAGCAATGAGGAACAAAACAATCTACCCGAG
ATCACAGCCCATGAAATGAAAGACCTTTTATCATCATATTATCTCACCAA
TGATGAAAAAGCCTTCCTTGAAGATGAAAGACATTTAAATGGGAATTCTA
AAATCACCAATAACCATAAATTTTGTTCCCTCCAAGAGACAGCTGTTGGT
GTTTGTGATTTAAACCTAAAGAAAAGTTGTGTTCGTGCTTCCAGGCTAGA
AAACATAAACACCCGTCTAATTGACGAAACCATTGGCAACCAGACGAATC
TACCAGAGCCAAAGCAATCAACATTTTTTTACCGAATCGATAACCGTTTA
CCAGCCGATCTTCGAAAAGCTGGTGGATTCTTCGGCGTTAACCCGATCTC
ATTAAATCATGCTAAATTGGTAGCACCTGCATTAGCCTCATTACCATGTG
AGCATGACGAGCTGGCTGAATTTCGCAGGCTAAATCGTGAACCATTTGTC
TTAACTTCTAAAGAAGAATATAAGCCAGCTAAAGCAAGTCCCATGCTTGT
TTATAAACTTAAAGTACCAGTTACACTACCCTCTAAGATTGATAATACTA
CAGAATCAGGCAAAAGAGAGCTTATTTTTAACGGAAAGAATATTCAAGAT
TCTCAAATCATTGGTGTCAAATCTGGGGATGATGTCTCTTTTCTTACTGG
TTTATCAGCGAGTTTTATACAGGGTGTTGATTTTAATGATGGGCGCGGTT
TTTTGTCCATGCCAGACGCCATGAAACGTGCAGATGAGATGGCCAAAATG
GCTAAGAAACATTCTAAACATGATACCAATAAAGAGATCACTGTTATGGT
GCCTTTGGAAGACTCTGGCAAAAATGATGAAAGTGATTGATATGTAAAGG
TGATGGTGATCGAccattgaaatgaaaatagaaaaaattttgattacttt
aatttgcttttttctttctttgactCGTTCGCTTGACTGTGATGGTGAAT
TAACGTAGAAGCAGACACTTTTGAAGATGggagagtgactgaagcgatta
gGACAGTTTGGACCCGAGGACGATGAAAATATTCGTAAACCGTTGTCTTT
TGTCATTCGGGATATAGACAAATGAAATAACAAAACATTCATAAATTCAA
tgatattttggtcaaagaCGGATCAAATATTGATGAATGACGTATATTTG
ATTGATTGTAATTAGATGAAATGGTGCCAGTGAAAATTGGGAaatgtttt
gtaaaaaaatgtaactttctatttatacactttctgtttaaaatatttga
aactaaACTATTTACTTTGAGGAGGTGTCTCTCATCCGTCTGTTCAAATA
CTGAAGTTGAAGACTTCTCATATTCAAAAGATGATGTTTGGATATTAATC
TAAAAATTcactaaattgaaaattcacGAATTCTACAGTACAGGCAGGCA
TTTCTCTTCAAACAATAAAGATGTTCCAGCAAAGGTATAGCTTTATTTTA
CTATTGTGTACTTGCACTGCAATCTTACACCAAACAAGTTGCACTCCACT
GCAACAAAATGGATCTACAACCTCAAACACAAAAACGTGTGAAGATGTCC
TGCAACCCCAAACTTGTACAAAACTTCGACAAATAGCCGTCCTCTTCAAT
GAGAAAATTGAGAATGTCAACGAAGCCGTTCGAATGGCACTTCAAAAACA
TATCACCAAAACTCAAGATGTCATTATTTTCGTCAAGGATTACTTGGTCA
ACCAagctaaaaatttcaaatgtcaAAACGTACTTTCGAACGACCAATGC
ACAAAGCTGATCTCCGTTGCCAAGCGTTTCCATGTCTCGATTGCCAACCT
AACCAGAGATATTGAGGAAGCTATCACAGATGGAATCACTCAAGGAAAAG
CACTTTATCAAAAAACCATTGAAATTATGCTGATGAAAATCAATAACTTA
TCTTGTGAACAGTTAATTGATAAACAGACTTGTGACAAGATCAGAAATTT
TGCTACAAAGATTCACGCAAGTGCAATGGAAGTTCACAGAGCAATTATCG
ATGCGTATAGCAAAGGCTTACAAAATGCACAAGATTTCTTAAAAGATGCC
ATTGATTATTTGACCAATGAACTGAGTTGCGATGATGTCCTCTCGTCTTT
GGCTTGTTCCAAGCTTTCTTTCCTGTGTGGTAAGTTTGGAACCTCGTTTA
CGAAAGTTGTCGACTTCTTACGAACCACATTTGCCAACGGAGTGACACAG
ATCACATCTTTGTACCAAGCAGCCACCAAATATATCATGGAACGTTGGTT
AGGCGTCGCTTCAAAGTTGGGCAAACGGAGTATTGACGAAATGGATGAGG
AACATTTTCTTCAATTCTTGGATTGGGTTGACGACTATTTAGAAAAACGA
TTTTGAACTGTTGCACCATATTTTGGAATAGATGCTAACGACTACAAGAA
TcagacttctggagtcgctggAGTTTGGTTATAATTATGAGTGTAAATGT
TGtctattttttgatgttttatggCGTATATTTAGTTAAGGGAAGTAAGT
AGAAATTTTTGACGAAGTATTATTGTaatattcttcaatttttttcccaa
aCAATCTTTTTAATATTATAGGAAATTTCTAGAAATTCTTAAGTTTCAAA
AGATGTGAGGC
Run BLAST on NCBI

protein sequence of TCONS_00003292-protein

>TCONS_00003292-protein ID=TCONS_00003292-protein|Name=TCONS_00003292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=385bp
MMISYFIIGISLILLSICRTSENAALGFRPCDPEKDGPMCHVVGQFGDQC
NELNPCARGLYCKRRSHASYYCDNGVEETHRSLKHLLSGCLNNFTSSNEE
QNNLPEITAHEMKDLLSSYYLTNDEKAFLEDERHLNGNSKITNNHKFCSL
QETAVGVCDLNLKKSCVRASRLENINTRLIDETIGNQTNLPEPKQSTFFY
RIDNRLPADLRKAGGFFGVNPISLNHAKLVAPALASLPCEHDELAEFRRL
NREPFVLTSKEEYKPAKASPMLVYKLKVPVTLPSKIDNTTESGKRELIFN
GKNIQDSQIIGVKSGDDVSFLTGLSASFIQGVDFNDGRGFLSMPDAMKRA
DEMAKMAKKHSKHDTNKEITVMVPLEDSGKNDESD
Run BLAST on NCBI

transcript from alignment at sc0000026:841748..848524+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003292 ID=TCONS_00003292|Name=TCONS_00003292|organism=Clytia hemisphaerica|type=transcript|length=6777bp|location=Sequence derived from alignment at sc0000026:841748..848524+ (Clytia hemisphaerica)
gacattttaaaaacatgtttgtttgaatgaaaaaaatatttaaaaattaa
atttcgaaGAACAACTAGtcgaagaaataaaaaaagcttttcaaaacttt
tatctTTGAAATGTGATAAAACAGTTAAAATCATGATGATTTCCTACTTC
ATAATTGGTATTTCGTTAATACTTCTATCTATTTGCCGGACGTCCGAAAA
TGCAGCCTTGGGGTTTCGACCATGTGATCCAGAGAAGGACGGTCCAATGT
GCCATGTTGTCGGACAGTTCGGTGATCAATGTAATGAATTGAACCCATGT
GCACGTGGTCTATATTGCAAACGGAGGTAAAAGCAATTATAATATTCAGT
GTAAAGTCTCTAtaattagattttcatcgaataatgaAACGTATCGAATA
TTAGAACATCGAATTAGTGAGCGTAAACTGTATATAGTATAAAGTCTAAC
TAACTCGAGCAAAAACGGGGGATACAAATAGATTCATAAAGACTGGTTTT
AGGGTATTTTATAACTGTTGGATGAGAGAATTTTCTTGAGTTAAGGGAAG
AATAAAGCTACAGAGGATCGAGTTATAGAAAATCCACTGTatagtttttt
gaaaataattgattATTGAATATTTAACTGAATGGCATTATTTCTTCTCT
TTTCCAGGTCACATGCATCCTACTATTGCGATAATGGTGTAGAGGAGACA
CACCGAAGCTTAAAACACCTTCTTTCTGGCTGTCTCAACAATTTTACATC
AAGCAATGAGGAACAAAACAATCTACCCGAGATCACAGCCCATGAAATGA
AAGACCTTTTATCATCATATTATCTCACCAATGATGAAAAAGCCTTCCTT
GAAGATGAAAGACATTTAAATGGGAATTCTAAAATCACCAATAACCATAA
ATTTTGTTCCCTCCAAGAGACAGCTGTTGGTGTTTGTGATTTAAACCTAA
AGAAAAGTTGTGTTCGTGCTTCCAGGCTAGAAAACATAAACACCCGTCTA
ATTGACGAAACCATTGGCAACCAGACGAATCTACCAGAGCCAAAGCAATC
AACATTTTTTTACCGAATCGATAACCGTTTACCAGCCGATCTTCGAAAAG
CTGGTGGATTCTTCGGCGTTAACCCGATCTCATTAAATCATGCTAAATTG
GTAGCACCTGCATTAGCCTCATTACCATGTGAGCATGACGAGCTGGCTGA
ATTTCGCAGGCTAAATCGTGAACCATTTGTCTTAACTTCTAAAGAAGAAT
ATAAGCCAGCTAAAGCAAGTCCCATGCTTGTTTATAAACTTAAAGTACCA
GTTACACTACCCTCTAAGATTGATAATACTACAGAATCAGGCAAAAGAGA
GCTTATTTTTAACGGAAAGAATATTCAAGATTCTCAAATCATTGGTGTCA
AATCTGGGGATGATGTCTCTTTTCTTACTGGTTTATCAGCGAGTTTTATA
CAGGGTGTTGATTTTAATGATGGGCGCGGTTTTTTGTCCATGCCAGACGC
CATGAAACGTGCAGATGAGATGGCCAAAATGGCTAAGAAACATTCTAAAC
ATGATACCAATAAAGAGATCACTGTTATGGTGCCTTTGGAAGACTCTGGC
AAAAATGATGAAAGTGATTGATATGTAAAGGTGATGGTGATCGAccattg
aaatgaaaatagaaaaaattttgattactttaatttgcttttttctttct
ttgactCGTTCGCTTGACTGTGATGGTGAATTAACGTAGAAGCAGACACT
TTTGAAGATGggagagtgactgaagcgattagGACAGTTTGGACCCGAGG
ACGATGAAAATATTCGTAAACCGTTGTCTTTTGTCATTCGGGATATAGAC
AAATGAAATAACAAAACATTCATAAATTCAAtgatattttggtcaaagaC
GGATCAAATATTGATGAATGACGTATATTTGATTGATTGTAATTAGATGA
AATGGTGCCAGTGAAAATTGGGAaatgttttgtaaaaaaatgtaactttc
tatttatacactttctgtttaaaatatttgaaactaaACTATTTACTTTG
AGGAGGTGTCTCTCATCCGTCTGTTCAAATACTGAAGTTGAAGACTTCTC
ATATTCAAAAGATGATGTTTGGATATTAATCTAAAAATTcactaaattga
aaattcacGAATTCTACAGTACAGGCAGGCATTTCTCTTCAAACAATAAA
GGTAACCTTtatcttttacttttttgataGTATCCCTTTGATAATCTCCA
AATTTTGATTGAGTTAGGttccatattttgaagtttcttGTCACAAAAAT
ACACCCCTTATCCACCCTGTGGAGCGTcctaatcaaaaagaaaaaactat
cAGCCAAAAATTCTTCcattgtaaaaataatttttggaaattttattccT
TTACCGTAGTGCATAGCATCCTCCCCTCCCTGTGTTCAGGGGGGGATGGG
TATGAGACCAGGCATGTCCACCGTAATTTCCAGCAAGAAGCTATAGAAAT
TAGCATTAAAGTGCTACACCCCATTTCCTTTACTGTATATAAAAACCCCT
ACAATAGATTTGTTAGGACTGGAAAGTTTGTGTTTTTTAGATGTTCCAGC
AAAGGTATAGCTTTATTTTACTATTGTGTACTTGCACTGCAATCTTACAC
CAAACAAGTTGCACTCCACTGCAACAAAATGGATCTACAACCTCAAACAC
AAAAACGTGTGAAGATGTCCTGCAACCCCAAGTGAGTTGTTATTTTTATG
CTATAGAAAATATAATCTTTCAATTGGAAATACGAAATTGTTTTTGTAAG
GCCAACTGTGTTTTCCGCTCGGTCCCAATGTGTTTCATGATAGGTACGGT
TCCAGATTTCTAAGTTGGCCTAGAATTCACAATTTTGCAGTAATTCTCAA
CGACTCCAGTACTTTACATCTTCAGTAATTTAGAGCTACAAAAGTGATTT
TTAGCGTCTCAGTAGCTAATAGGGGCGAGGCTAACTGACAAGCCCTTCCT
GATGGAGAAGAGAATGAATAATAGGATCTCAATTTATAAGGAGTGTGTAA
AAGGCCCCTGCTTGGTGCGTAATGGTGTGGTTGGGGAGTTATCAAGGTTT
CAGTGTGAAAAATTTGACTATTTTTTCTTACGAAAAATGTGtgatgaaaa
aaatttcttcgtgATTGTggctagtctgaatcgcatcgcagacctctata
gatatacatcctataagaaacttttttcgctagaggatgagcagaagcct
agattGTGGCGAGCGAAGAAAATTGTCACGGTGACGAATCGCTTATTGGG
GGCCTCTTTTAGAATTACTAAGATACTTGTAGAGTGGAATCTCCATAACt
tgcacggggaacacaaatttgtttcaagttctggaattttcgagttatgg
agtaagatgGGTGAGATGAAGAGATTAGAGAAATTGCTTGAAAAAGGAAT
CATTTGAATTATaaatgttcgagttaaagaaactgTAATTTTCCAATATC
TTTCGAAACAATTTCTCATAGACTTGTACAAAACTTCGACAAATAGCCGT
CCTCTTCAATGAGAAAATTGAGAATGTCAACGAAGCCGTTCGAATGGCAC
TTCAAAAACATATCACCAAAACTCAAGATGTCATTATTTTCGTCAAGGAT
TACTTGGTCAACCAagctaaaaatttcaaatgtcaAAACGTACTTTCGAA
CGACGTAAGTTAAATTTCTGTGGCCGGTTTCTAGGGATTTGTTAGGATGC
ACTTGAGGTAGAACAGCCTCATCCACTCAAGGCTTTAATTACGTTACTAA
TGGACGCcagaaaatattaaatttatcAGTGAGACATATaatatgttgaa
cggtgaaaaagaatgcggctattatattttcatttttccaagtgAGACAT
ATAATACGTACACCAGTTTAATCAGACTAGAGAACTGAACTGGACGGACT
GATGAATTTCTCTCCCGACAATATCATATAACTCtcgaattcgaaaaaaa
aaagatttggaaagaaaaagaaaaaaagtattgGAAATTTAGCAGCTCGT
AAACTCGACTTTTTGCGATTTATACACTCGACTTATTTCAAGTTGTACTC
GACTCATTATGAGCTTTACAATCGAAATCCATAATTGAGTTCAAGAATGG
GTTCTAAATAGATGAGAAAAGGTAAATCTTTATGTCTTCACCATCAATAT
CGATAGCAATGCACAAAGCTGATCTCCGTTGCCAAGCGTTTCCATGTCTC
GATTGCCAACCTAACCAGAGATATTGAGGAAGCTATCACAGATGGAATCA
CTCAAGGAAAAGCACTTTATCAAAAAACCATTGAAATTATGCTGATGAAA
ATCAATAACTTATCTTGTGAACAGTTAATTGATAAACAGGTAAATTTGAT
TCATTCGAACTTAGAAGTCTCACTTAATATCATCCTAATGATAAAAGAAC
GGCTTAATACCAAGGCCTCCCGCTGattcgaacttctatttttcgaatcg
TCCCATATTATTCGAACTTTCCCGTCAAGATGAAACACCTCCTAAAATTC
TTTTAacaattcgaatctctctttgATTTTAATTTGAACGAATTATTCCT
GTTCGAGTTGGAATTTGCGAAAGTCAGCTGTGCAtcagaaaattaaaata
aaatttcatcccAGAAAAAGCATTATTGGGTTTTTCAGCTGTACAAAAGA
CTGCTGTCATCATTTTAAAACAAGAGATTCGCCATCAGCATTGGAATAAA
TGTATTTTTACTTTATAACTTCTGGCTATTGATAtatgtttttgtctttt
tctcttATTCTTGATCTTAGACTTGTGACAAGATCAGAAATTTTGCTACA
AAGATTCACGCAAGTGCAATGGAAGTTCACAGAGCAATTATCGATGCGTA
TAGCAAAGGCTTACAAAATGCACAAGATTTCTTAAAAGATGCCATTGATT
ATTTGACCAATGAACTGAGTTGCGATGATGTCCTCTCGTCTTTGGTAAGG
GGGGATCGATTGCTTTAATaaaattaaaactaattttGATGGATGGGAAA
CTAAACCTTACAATTTCCCTGTTAATCAAAGGACACTTACGAAAAGGTTA
GCTTAGTTAACGAAATCTTAACTGAAGAAACTGCTTTTGTTGCCAATTAT
TTTATCATTAAAAAGGTCAAACCACAGTTTAATATGATCTTTCTAAGATA
AGTTCATATACTTAACTTCACATTCCACCTGATTCCATCAATAAAACTTC
GTCCTTTTTCGTCTAATTTCTTTTTGGAGTGTTGGAGATAATCGTGTCAA
TCGTATTGCCTGCTAGGGGGTTACTCAGTTTTCCAGATGACGGAAAGATT
TGGGTCAAAATATAGAGGGAAACAGGTTTAGAATTTCGGGGTTCTTATCA
GATCTTATAAGAAGGTCCAAACGGAATTTAGTCTACAGAGTCTACTACGT
GATGCACATATTTTAttctggaaaaaaattaaactttgggAAACAAAAGA
AGGAAACAATAGAATTGTTCCTTGGCGTAACCTGCTATATTCTTGTTTAT
TTTCGTCATTAGGCTTGTTCCAAGCTTTCTTTCCTGTGTGGTAAGTTTGG
AACCTCGTTTACGAAAGTTGTCGACTTCTTACGAACCACATTTGCCAACG
GAGTGACACAGATCACATCTTTGTACCAAGCAGCCACCAAATATATCATG
GAACGTTGGTTAGGCGTCGCTTCAAAGTTGGGCAAACGGAGTATTGACGA
AATGGATGAGGGTAGGTTGTAGAATATTTCTAACTATAATTAACTATGTC
CTATTTCACGGTAAAACTTCACTTAAGACCTAAGAAATGACAAATTCCTC
TAAGTTTACATAGTGTTTTAAGAGTGAATCAATATTACGTAAGattgaag
aaatttcaaaagacattATAAGTTCAAGTTGTAAGTATGGTGTAAGGTCT
AAAATAAGACTTCACACACTTGTGAAGATGCTTAAAGTTCTTAAAGTATC
TTTCATACCATCAACCAACATAGCAACTGTTTTAACCTTGCTTCTAAAGC
CCTAGAATCCATTGACAGTTAGGAGCTCATTTTGATCCATTTTCGTGTCT
GTGGTTGTAGGGTTATTATCCTTCCATTTCATACTGTAAATAAGCTTGAA
GATCTTTTTGCTAGTGGGAGCTTCAACGAGAAAAGGACTTTCGAAACTAA
CATTCTCCTTGGTTTAAAACAAGATGCTTAGAATTATTGTATTCATGATA
TTCATGACGTAatcttttatacggaagcacccgagataacccggaactag
tggcaaaataacaaaagactagtggcaaattttgccactagttccagatt
attttgtgtgcttcTGTAtgaaagattacatcatgaatatcatgaatagg
agGTTCGATGAAACACGGAAAATCTGCTAAAAACATTTATGAATATTTTC
CTCTTGTTGTTTTCAGAACATTTTCTTCAATTCTTGGATTGGGTTGACGA
CTATTTAGAAAAACGATTTTGAACTGTTGCACCATATTTTGGAATAGATG
CTAACGACTACAAGAATcagacttctggagtcgctggAGTTTGGTTATAA
TTATGAGTGTAAATGTTGtctattttttgatgttttatggCGTATATTTA
GTTAAGGGAAGTAAGTAGAAATTTTTGACGAAGTATTATTGTaatattct
tcaatttttttcccaaaCAATCTTTTTAATATTATAGGAAATTTCTAGAA
ATTCTTAAGTTTCAAAAGATGTGAGGC

Coding sequence (CDS) from alignment at sc0000026:841748..848524+

>TCONS_00003292 ID=TCONS_00003292|Name=TCONS_00003292|organism=Clytia hemisphaerica|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000026:841748..848524+ (Clytia hemisphaerica)
ATGATGATTTCCTACTTCATAATTGGTATTTCGTTAATACTTCTATCTAT
TTGCCGGACGTCCGAAAATGCAGCCTTGGGGTTTCGACCATGTGATCCAG
AGAAGGACGGTCCAATGTGCCATGTTGTCGGACAGTTCGGTGATCAATGT
AATGAATTGAACCCATGTGCACGTGGTCTATATTGCAAACGGAGGTCACA
TGCATCCTACTATTGCGATAATGGTGTAGAGGAGACACACCGAAGCTTAA
AACACCTTCTTTCTGGCTGTCTCAACAATTTTACATCAAGCAATGAGGAA
CAAAACAATCTACCCGAGATCACAGCCCATGAAATGAAAGACCTTTTATC
ATCATATTATCTCACCAATGATGAAAAAGCCTTCCTTGAAGATGAAAGAC
ATTTAAATGGGAATTCTAAAATCACCAATAACCATAAATTTTGTTCCCTC
CAAGAGACAGCTGTTGGTGTTTGTGATTTAAACCTAAAGAAAAGTTGTGT
TCGTGCTTCCAGGCTAGAAAACATAAACACCCGTCTAATTGACGAAACCA
TTGGCAACCAGACGAATCTACCAGAGCCAAAGCAATCAACATTTTTTTAC
CGAATCGATAACCGTTTACCAGCCGATCTTCGAAAAGCTGGTGGATTCTT
CGGCGTTAACCCGATCTCATTAAATCATGCTAAATTGGTAGCACCTGCAT
TAGCCTCATTACCATGTGAGCATGACGAGCTGGCTGAATTTCGCAGGCTA
AATCGTGAACCATTTGTCTTAACTTCTAAAGAAGAATATAAGCCAGCTAA
AGCAAGTCCCATGCTTGTTTATAAACTTAAAGTACCAGTTACACTACCCT
CTAAGATTGATAATACTACAGAATCAGGCAAAAGAGAGCTTATTTTTAAC
GGAAAGAATATTCAAGATTCTCAAATCATTGGTGTCAAATCTGGGGATGA
TGTCTCTTTTCTTACTGGTTTATCAGCGAGTTTTATACAGGGTGTTGATT
TTAATGATGGGCGCGGTTTTTTGTCCATGCCAGACGCCATGAAACGTGCA
GATGAGATGGCCAAAATGGCTAAGAAACATTCTAAACATGATACCAATAA
AGAGATCACTGTTATGGTGCCTTTGGAAGACTCTGGCAAAAATGATGAAA
GTGATTGAATGATGATTTCCTACTTCATAATTGGTATTTCGTTAATACTT
CTATCTATTTGCCGGACGTCCGAAAATGCAGCCTTGGGGTTTCGACCATG
TGATCCAGAGAAGGACGGTCCAATGTGCCATGTTGTCGGACAGTTCGGTG
ATCAATGTAATGAATTGAACCCATGTGCACGTGGTCTATATTGCAAACGG
AGGTCACATGCATCCTACTATTGCGATAATGGTGTAGAGGAGACACACCG
AAGCTTAAAACACCTTCTTTCTGGCTGTCTCAACAATTTTACATCAAGCA
ATGAGGAACAAAACAATCTACCCGAGATCACAGCCCATGAAATGAAAGAC
CTTTTATCATCATATTATCTCACCAATGATGAAAAAGCCTTCCTTGAAGA
TGAAAGACATTTAAATGGGAATTCTAAAATCACCAATAACCATAAATTTT
GTTCCCTCCAAGAGACAGCTGTTGGTGTTTGTGATTTAAACCTAAAGAAA
AGTTGTGTTCGTGCTTCCAGGCTAGAAAACATAAACACCCGTCTAATTGA
CGAAACCATTGGCAACCAGACGAATCTACCAGAGCCAAAGCAATCAACAT
TTTTTTACCGAATCGATAACCGTTTACCAGCCGATCTTCGAAAAGCTGGT
GGATTCTTCGGCGTTAACCCGATCTCATTAAATCATGCTAAATTGGTAGC
ACCTGCATTAGCCTCATTACCATGTGAGCATGACGAGCTGGCTGAATTTC
GCAGGCTAAATCGTGAACCATTTGTCTTAACTTCTAAAGAAGAATATAAG
CCAGCTAAAGCAAGTCCCATGCTTGTTTATAAACTTAAAGTACCAGTTAC
ACTACCCTCTAAGATTGATAATACTACAGAATCAGGCAAAAGAGAGCTTA
TTTTTAACGGAAAGAATATTCAAGATTCTCAAATCATTGGTGTCAAATCT
GGGGATGATGTCTCTTTTCTTACTGGTTTATCAGCGAGTTTTATACAGGG
TGTTGATTTTAATGATGGGCGCGGTTTTTTGTCCATGCCAGACGCCATGA
AACGTGCAGATGAGATGGCCAAAATGGCTAAGAAACATTCTAAACATGAT
ACCAATAAAGAGATCACTGTTATGGTGCCTTTGGAAGACTCTGGCAAAAA
TGATGAAAGTGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001830XLOC_001830Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003292-proteinTCONS_00003292-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003292-exon-sc0000026-1491911889:841748..842073TCONS_00003292-exon-sc0000026-1491911889:841748..842073Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:841748..842073TCONS_00003292-exon-sc0000026-1510915933:841748..842073Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:841748..842073TCONS_00003292-exon-sc0000026-1575043694:841748..842073Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:842405..843948TCONS_00003292-exon-sc0000026-1491911889:842405..843948Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:842405..843948TCONS_00003292-exon-sc0000026-1510915933:842405..843948Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:842405..843948TCONS_00003292-exon-sc0000026-1575043694:842405..843948Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:844338..844478TCONS_00003292-exon-sc0000026-1491911889:844338..844478Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:844338..844478TCONS_00003292-exon-sc0000026-1510915933:844338..844478Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:844338..844478TCONS_00003292-exon-sc0000026-1575043694:844338..844478Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:845269..845451TCONS_00003292-exon-sc0000026-1491911889:845269..845451Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:845269..845451TCONS_00003292-exon-sc0000026-1510915933:845269..845451Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:845269..845451TCONS_00003292-exon-sc0000026-1575043694:845269..845451Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:845954..846136TCONS_00003292-exon-sc0000026-1491911889:845954..846136Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:845954..846136TCONS_00003292-exon-sc0000026-1510915933:845954..846136Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:845954..846136TCONS_00003292-exon-sc0000026-1575043694:845954..846136Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:846568..846741TCONS_00003292-exon-sc0000026-1491911889:846568..846741Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:846568..846741TCONS_00003292-exon-sc0000026-1510915933:846568..846741Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:846568..846741TCONS_00003292-exon-sc0000026-1575043694:846568..846741Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:847310..847508TCONS_00003292-exon-sc0000026-1491911889:847310..847508Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:847310..847508TCONS_00003292-exon-sc0000026-1510915933:847310..847508Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:847310..847508TCONS_00003292-exon-sc0000026-1575043694:847310..847508Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1491911889:848214..848524TCONS_00003292-exon-sc0000026-1491911889:848214..848524Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1510915933:848214..848524TCONS_00003292-exon-sc0000026-1510915933:848214..848524Clytia hemisphaericaexon
TCONS_00003292-exon-sc0000026-1575043694:848214..848524TCONS_00003292-exon-sc0000026-1575043694:848214..848524Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:841748..848524 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0248792	0	0	0	0.18453	0.132562	1.93516	1.94643	0.607992	0.220735	2.14251	2.75052	7.69406	5.83382	10.6802	19.4133	3.25909	3.46489	3.95385	4.3173	5.47243	5.68464	5.47699	7.3005	5.12865	7.44986	0.187629	0.0910193	2.69236	2.96817
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003292 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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