XLOC_001830 (gene) - C. hemisphaerica

Overview
NameXLOC_001830
Unique NameXLOC_001830
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:841748..848524+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001830 ID=XLOC_001830|Name=XLOC_001830|organism=Clytia hemisphaerica|type=gene|length=6777bp|location=Sequence derived from alignment at sc0000026:841748..848524+ (Clytia hemisphaerica)
gacattttaaaaacatgtttgtttgaatgaaaaaaatatttaaaaattaa atttcgaaGAACAACTAGtcgaagaaataaaaaaagcttttcaaaacttt tatctTTGAAATGTGATAAAACAGTTAAAATCATGATGATTTCCTACTTC ATAATTGGTATTTCGTTAATACTTCTATCTATTTGCCGGACGTCCGAAAA TGCAGCCTTGGGGTTTCGACCATGTGATCCAGAGAAGGACGGTCCAATGT GCCATGTTGTCGGACAGTTCGGTGATCAATGTAATGAATTGAACCCATGT GCACGTGGTCTATATTGCAAACGGAGGTAAAAGCAATTATAATATTCAGT GTAAAGTCTCTAtaattagattttcatcgaataatgaAACGTATCGAATA TTAGAACATCGAATTAGTGAGCGTAAACTGTATATAGTATAAAGTCTAAC TAACTCGAGCAAAAACGGGGGATACAAATAGATTCATAAAGACTGGTTTT AGGGTATTTTATAACTGTTGGATGAGAGAATTTTCTTGAGTTAAGGGAAG AATAAAGCTACAGAGGATCGAGTTATAGAAAATCCACTGTatagtttttt gaaaataattgattATTGAATATTTAACTGAATGGCATTATTTCTTCTCT TTTCCAGGTCACATGCATCCTACTATTGCGATAATGGTGTAGAGGAGACA CACCGAAGCTTAAAACACCTTCTTTCTGGCTGTCTCAACAATTTTACATC AAGCAATGAGGAACAAAACAATCTACCCGAGATCACAGCCCATGAAATGA AAGACCTTTTATCATCATATTATCTCACCAATGATGAAAAAGCCTTCCTT GAAGATGAAAGACATTTAAATGGGAATTCTAAAATCACCAATAACCATAA ATTTTGTTCCCTCCAAGAGACAGCTGTTGGTGTTTGTGATTTAAACCTAA AGAAAAGTTGTGTTCGTGCTTCCAGGCTAGAAAACATAAACACCCGTCTA ATTGACGAAACCATTGGCAACCAGACGAATCTACCAGAGCCAAAGCAATC AACATTTTTTTACCGAATCGATAACCGTTTACCAGCCGATCTTCGAAAAG CTGGTGGATTCTTCGGCGTTAACCCGATCTCATTAAATCATGCTAAATTG GTAGCACCTGCATTAGCCTCATTACCATGTGAGCATGACGAGCTGGCTGA ATTTCGCAGGCTAAATCGTGAACCATTTGTCTTAACTTCTAAAGAAGAAT ATAAGCCAGCTAAAGCAAGTCCCATGCTTGTTTATAAACTTAAAGTACCA GTTACACTACCCTCTAAGATTGATAATACTACAGAATCAGGCAAAAGAGA GCTTATTTTTAACGGAAAGAATATTCAAGATTCTCAAATCATTGGTGTCA AATCTGGGGATGATGTCTCTTTTCTTACTGGTTTATCAGCGAGTTTTATA CAGGGTGTTGATTTTAATGATGGGCGCGGTTTTTTGTCCATGCCAGACGC CATGAAACGTGCAGATGAGATGGCCAAAATGGCTAAGAAACATTCTAAAC ATGATACCAATAAAGAGATCACTGTTATGGTGCCTTTGGAAGACTCTGGC AAAAATGATGAAAGTGATTGATATGTAAAGGTGATGGTGATCGAccattg aaatgaaaatagaaaaaattttgattactttaatttgcttttttctttct ttgactCGTTCGCTTGACTGTGATGGTGAATTAACGTAGAAGCAGACACT TTTGAAGATGggagagtgactgaagcgattagGACAGTTTGGACCCGAGG ACGATGAAAATATTCGTAAACCGTTGTCTTTTGTCATTCGGGATATAGAC AAATGAAATAACAAAACATTCATAAATTCAAtgatattttggtcaaagaC GGATCAAATATTGATGAATGACGTATATTTGATTGATTGTAATTAGATGA AATGGTGCCAGTGAAAATTGGGAaatgttttgtaaaaaaatgtaactttc tatttatacactttctgtttaaaatatttgaaactaaACTATTTACTTTG AGGAGGTGTCTCTCATCCGTCTGTTCAAATACTGAAGTTGAAGACTTCTC ATATTCAAAAGATGATGTTTGGATATTAATCTAAAAATTcactaaattga aaattcacGAATTCTACAGTACAGGCAGGCATTTCTCTTCAAACAATAAA GGTAACCTTtatcttttacttttttgataGTATCCCTTTGATAATCTCCA AATTTTGATTGAGTTAGGttccatattttgaagtttcttGTCACAAAAAT ACACCCCTTATCCACCCTGTGGAGCGTcctaatcaaaaagaaaaaactat cAGCCAAAAATTCTTCcattgtaaaaataatttttggaaattttattccT TTACCGTAGTGCATAGCATCCTCCCCTCCCTGTGTTCAGGGGGGGATGGG TATGAGACCAGGCATGTCCACCGTAATTTCCAGCAAGAAGCTATAGAAAT TAGCATTAAAGTGCTACACCCCATTTCCTTTACTGTATATAAAAACCCCT ACAATAGATTTGTTAGGACTGGAAAGTTTGTGTTTTTTAGATGTTCCAGC AAAGGTATAGCTTTATTTTACTATTGTGTACTTGCACTGCAATCTTACAC CAAACAAGTTGCACTCCACTGCAACAAAATGGATCTACAACCTCAAACAC AAAAACGTGTGAAGATGTCCTGCAACCCCAAGTGAGTTGTTATTTTTATG CTATAGAAAATATAATCTTTCAATTGGAAATACGAAATTGTTTTTGTAAG GCCAACTGTGTTTTCCGCTCGGTCCCAATGTGTTTCATGATAGGTACGGT TCCAGATTTCTAAGTTGGCCTAGAATTCACAATTTTGCAGTAATTCTCAA CGACTCCAGTACTTTACATCTTCAGTAATTTAGAGCTACAAAAGTGATTT TTAGCGTCTCAGTAGCTAATAGGGGCGAGGCTAACTGACAAGCCCTTCCT GATGGAGAAGAGAATGAATAATAGGATCTCAATTTATAAGGAGTGTGTAA AAGGCCCCTGCTTGGTGCGTAATGGTGTGGTTGGGGAGTTATCAAGGTTT CAGTGTGAAAAATTTGACTATTTTTTCTTACGAAAAATGTGtgatgaaaa aaatttcttcgtgATTGTggctagtctgaatcgcatcgcagacctctata gatatacatcctataagaaacttttttcgctagaggatgagcagaagcct agattGTGGCGAGCGAAGAAAATTGTCACGGTGACGAATCGCTTATTGGG GGCCTCTTTTAGAATTACTAAGATACTTGTAGAGTGGAATCTCCATAACt tgcacggggaacacaaatttgtttcaagttctggaattttcgagttatgg agtaagatgGGTGAGATGAAGAGATTAGAGAAATTGCTTGAAAAAGGAAT CATTTGAATTATaaatgttcgagttaaagaaactgTAATTTTCCAATATC TTTCGAAACAATTTCTCATAGACTTGTACAAAACTTCGACAAATAGCCGT CCTCTTCAATGAGAAAATTGAGAATGTCAACGAAGCCGTTCGAATGGCAC TTCAAAAACATATCACCAAAACTCAAGATGTCATTATTTTCGTCAAGGAT TACTTGGTCAACCAagctaaaaatttcaaatgtcaAAACGTACTTTCGAA CGACGTAAGTTAAATTTCTGTGGCCGGTTTCTAGGGATTTGTTAGGATGC ACTTGAGGTAGAACAGCCTCATCCACTCAAGGCTTTAATTACGTTACTAA TGGACGCcagaaaatattaaatttatcAGTGAGACATATaatatgttgaa cggtgaaaaagaatgcggctattatattttcatttttccaagtgAGACAT ATAATACGTACACCAGTTTAATCAGACTAGAGAACTGAACTGGACGGACT GATGAATTTCTCTCCCGACAATATCATATAACTCtcgaattcgaaaaaaa aaagatttggaaagaaaaagaaaaaaagtattgGAAATTTAGCAGCTCGT AAACTCGACTTTTTGCGATTTATACACTCGACTTATTTCAAGTTGTACTC GACTCATTATGAGCTTTACAATCGAAATCCATAATTGAGTTCAAGAATGG GTTCTAAATAGATGAGAAAAGGTAAATCTTTATGTCTTCACCATCAATAT CGATAGCAATGCACAAAGCTGATCTCCGTTGCCAAGCGTTTCCATGTCTC GATTGCCAACCTAACCAGAGATATTGAGGAAGCTATCACAGATGGAATCA CTCAAGGAAAAGCACTTTATCAAAAAACCATTGAAATTATGCTGATGAAA ATCAATAACTTATCTTGTGAACAGTTAATTGATAAACAGGTAAATTTGAT TCATTCGAACTTAGAAGTCTCACTTAATATCATCCTAATGATAAAAGAAC GGCTTAATACCAAGGCCTCCCGCTGattcgaacttctatttttcgaatcg TCCCATATTATTCGAACTTTCCCGTCAAGATGAAACACCTCCTAAAATTC TTTTAacaattcgaatctctctttgATTTTAATTTGAACGAATTATTCCT GTTCGAGTTGGAATTTGCGAAAGTCAGCTGTGCAtcagaaaattaaaata aaatttcatcccAGAAAAAGCATTATTGGGTTTTTCAGCTGTACAAAAGA CTGCTGTCATCATTTTAAAACAAGAGATTCGCCATCAGCATTGGAATAAA TGTATTTTTACTTTATAACTTCTGGCTATTGATAtatgtttttgtctttt tctcttATTCTTGATCTTAGACTTGTGACAAGATCAGAAATTTTGCTACA AAGATTCACGCAAGTGCAATGGAAGTTCACAGAGCAATTATCGATGCGTA TAGCAAAGGCTTACAAAATGCACAAGATTTCTTAAAAGATGCCATTGATT ATTTGACCAATGAACTGAGTTGCGATGATGTCCTCTCGTCTTTGGTAAGG GGGGATCGATTGCTTTAATaaaattaaaactaattttGATGGATGGGAAA CTAAACCTTACAATTTCCCTGTTAATCAAAGGACACTTACGAAAAGGTTA GCTTAGTTAACGAAATCTTAACTGAAGAAACTGCTTTTGTTGCCAATTAT TTTATCATTAAAAAGGTCAAACCACAGTTTAATATGATCTTTCTAAGATA AGTTCATATACTTAACTTCACATTCCACCTGATTCCATCAATAAAACTTC GTCCTTTTTCGTCTAATTTCTTTTTGGAGTGTTGGAGATAATCGTGTCAA TCGTATTGCCTGCTAGGGGGTTACTCAGTTTTCCAGATGACGGAAAGATT TGGGTCAAAATATAGAGGGAAACAGGTTTAGAATTTCGGGGTTCTTATCA GATCTTATAAGAAGGTCCAAACGGAATTTAGTCTACAGAGTCTACTACGT GATGCACATATTTTAttctggaaaaaaattaaactttgggAAACAAAAGA AGGAAACAATAGAATTGTTCCTTGGCGTAACCTGCTATATTCTTGTTTAT TTTCGTCATTAGGCTTGTTCCAAGCTTTCTTTCCTGTGTGGTAAGTTTGG AACCTCGTTTACGAAAGTTGTCGACTTCTTACGAACCACATTTGCCAACG GAGTGACACAGATCACATCTTTGTACCAAGCAGCCACCAAATATATCATG GAACGTTGGTTAGGCGTCGCTTCAAAGTTGGGCAAACGGAGTATTGACGA AATGGATGAGGGTAGGTTGTAGAATATTTCTAACTATAATTAACTATGTC CTATTTCACGGTAAAACTTCACTTAAGACCTAAGAAATGACAAATTCCTC TAAGTTTACATAGTGTTTTAAGAGTGAATCAATATTACGTAAGattgaag aaatttcaaaagacattATAAGTTCAAGTTGTAAGTATGGTGTAAGGTCT AAAATAAGACTTCACACACTTGTGAAGATGCTTAAAGTTCTTAAAGTATC TTTCATACCATCAACCAACATAGCAACTGTTTTAACCTTGCTTCTAAAGC CCTAGAATCCATTGACAGTTAGGAGCTCATTTTGATCCATTTTCGTGTCT GTGGTTGTAGGGTTATTATCCTTCCATTTCATACTGTAAATAAGCTTGAA GATCTTTTTGCTAGTGGGAGCTTCAACGAGAAAAGGACTTTCGAAACTAA CATTCTCCTTGGTTTAAAACAAGATGCTTAGAATTATTGTATTCATGATA TTCATGACGTAatcttttatacggaagcacccgagataacccggaactag tggcaaaataacaaaagactagtggcaaattttgccactagttccagatt attttgtgtgcttcTGTAtgaaagattacatcatgaatatcatgaatagg agGTTCGATGAAACACGGAAAATCTGCTAAAAACATTTATGAATATTTTC CTCTTGTTGTTTTCAGAACATTTTCTTCAATTCTTGGATTGGGTTGACGA CTATTTAGAAAAACGATTTTGAACTGTTGCACCATATTTTGGAATAGATG CTAACGACTACAAGAATcagacttctggagtcgctggAGTTTGGTTATAA TTATGAGTGTAAATGTTGtctattttttgatgttttatggCGTATATTTA GTTAAGGGAAGTAAGTAGAAATTTTTGACGAAGTATTATTGTaatattct tcaatttttttcccaaaCAATCTTTTTAATATTATAGGAAATTTCTAGAA ATTCTTAAGTTTCAAAAGATGTGAGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003292TCONS_00003292Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003292-proteinTCONS_00003292-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:841748..848524 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0 0 0 0.18 0.13 1.94 1.95 0.61 0.22 2.14 2.75 7.69 5.83 10.68 19.41 3.26 3.46 3.95 4.32 5.47 5.68 5.48 7.3 5.13 7.45 0.19 0.09 2.69 2.97