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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003218 ID=TCONS_00003218|Name=TCONS_00003218|organism=Clytia hemisphaerica|type=transcript|length=891bp
tttccaaccttcaattataaaaccaaaatttccaacccaaaaatatcgaa
tttccaaccttggaaatcgaacattttttcctgtgtatgtTGACTCATAT
TTACAATCATCCTGCATatgcgtagcgagataccctgcaaaatttatgag
ggagtgcagacgtttatgacattcattatcttttgataaaacgaAGACAT
TAATTACAGATTCGTAAAACCGTTCtcaaattttgcagggtatctcgcta
cgcctatgacTCATAGTCATCCAGACTAATATTACCTACGGTTGTTTAAA
GGTCTGCGATTCACACTAAACTACAAAGTTTATCCTTTTCATCCTCGCTG
GgattcttttttaaatactctttgaaaaaaagttcgtcccTTGaccaaaa
caaatatttttcaactactTTAAACGATCCGTCAAGAGAGAAAAATGCAC
CATACAAATCTCATAATAAAATGTCTTTTTGTCCATAGCATTTTAAAGTA
GTGACgaattattcaataaattaattcagttttttgaaaacctcatTCAC
GCCATACGTCAGGAAAGCTCATTAAACTGTGTAAAATACTGACCGGTGAA
AAATACTTCCTCTTAAAATGCTTGAACTGCTTCTGTTGGAGAATCAATAG
GGGAGGAAATCGATCACTGGATTTCCCTACATAAGCACGGCGCTAGACCT
TTCAACTCCTGTATCCCAGAATGGAGGATCAAATCTATCTTcttaaaata
aacattttaagaCCATTTAACTATTCCATATGATTAGACGAATGGATGGA
TGGcgaataaataagttttgaatttgataattttgaaaaactttttattt
tactataCCTTCTATgaatttgattgattttttggacctac Run BLAST on NCBI transcript from alignment at sc0000025:130581..131471 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003218 ID=TCONS_00003218|Name=TCONS_00003218|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at sc0000025:130581..131471 (Clytia hemisphaerica)
gtaggtccaaaaaatcaatcaaattcATAGAAGGtatagtaaaataaaaa
gtttttcaaaattatcaaattcaaaacttatttattcgCCATCCATCCAT
TCGTCTAATCATATGGAATAGTTAAATGGtcttaaaatgtttattttaag
AAGATAGATTTGATCCTCCATTCTGGGATACAGGAGTTGAAAGGTCTAGC
GCCGTGCTTATGTAGGGAAATCCAGTGATCGATTTCCTCCCCTATTGATT
CTCCAACAGAAGCAGTTCAAGCATTTTAAGAGGAAGTATTTTTCACCGGT
CAGTATTTTACACAGTTTAATGAGCTTTCCTGACGTATGGCGTGAatgag
gttttcaaaaaactgaattaatttattgaataattcGTCACTACTTTAAA
ATGCTATGGACAAAAAGACATTTTATTATGAGATTTGTATGGTGCATTTT
TCTCTCTTGACGGATCGTTTAAagtagttgaaaaatatttgttttggtCA
AgggacgaactttttttcaaagagtatttaaaaaagaatcCCAGCGAGGA
TGAAAAGGATAAACTTTGTAGTTTAGTGTGAATCGCAGACCTTTAAACAA
CCGTAGGTAATATTAGTCTGGATGACTATGAgtcataggcgtagcgagat
accctgcaaaatttgaGAACGGTTTTACGAATCTGTAATTAATGTCTtcg
ttttatcaaaagataatgaatgtcataaacgtctgcactccctcataaat
tttgcagggtatctcgctacgcatATGCAGGATGATTGTAAATATGAGTC
Aacatacacaggaaaaaatgttcgatttccaaggttggaaattcgatatt
tttgggttggaaattttggttttataattgaaggttggaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003218-exon-sc0000025-1491911889:130581..131471 | TCONS_00003218-exon-sc0000025-1491911889:130581..131471 | Clytia hemisphaerica | exon |
| TCONS_00003218-exon-sc0000025-1510915933:130581..131471 | TCONS_00003218-exon-sc0000025-1510915933:130581..131471 | Clytia hemisphaerica | exon |
| TCONS_00003218-exon-sc0000025-1575043694:130581..131471 | TCONS_00003218-exon-sc0000025-1575043694:130581..131471 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:130581..131471 . |
Blast
The following BLAST results are available for this feature:
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