TCONS_00003209 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003209
Unique NameTCONS_00003209
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003209 ID=TCONS_00003209|Name=TCONS_00003209|organism=Clytia hemisphaerica|type=transcript|length=1288bp
CTTTATTATGAATTAAGCAATATCGAAATCTCGTTAAACGGTTAGGTTCT
AAGAAATTTTACCAGgagaaaaacattagaaaacaaaatggcgaatACGA
CAGACACAGAACCTTTACTGATAGACACAGATGACAACGATTCACTACCT
TCAGCTCCAAACTTAGGCACAAATGAAAATGatGGCAGCATTGACGTCAC
CAACTCCTCAATAAATCAAAACAGAACAAGTGGAGATGGTGCACCTCCAC
CTTATACAGACTCTCCTCCCCCATATGAGGGGGTACCTGGGGTGCCTGCA
ATTGCTGCAGCTCCCGCACCACCTGGTGTTATGGGAGAACCAACAGTTGT
TTGCAGAGTTTGTCAGCAGTTGATTTTCATACGGGGACGTGAAGGACAAA
GAGTTGTAAAATGTTCAAACTGTCACGAAGCAACTCCAATCAAAGCACCA
CCTGCTGCTAAAAAATACATCAGATGTCCTTGTAATGCATTGCTAACATG
TCGTGCTACATCTACCAGAATTTCATGCCCAAGACCTAATTGTAAACGGG
TGATAAACGTTGGTGGTACACCACCGGCTGCAACTGGCCCCATGGTGCCA
AATGTACAAGCTGGCAATAATTCGAGAATAAGAGTTACTTGTGGGCACTG
TAATGAAACTTTTGTGTTCCGCACAACTGCTCATTTGGCAAGATGTCCAT
ACTGCCGACGAGTATCTTCAGTGGGACCAAAATTTGCCAAGAACAGGGCC
ATTATTTTTGCTGCCATTGGTGTTCTTTTCTTGACTGCTGGTGTTGGAGT
TACTgTTGCCACTTTGGAAATTGCTCAAAAGAATGGAGgggTTTATGTTG
TTTGGATTGGTGCATTTATTGTTGGATTATTAAACTTGATTCGAAGCTGT
TATTATTGCCAAATGACCGTCAGTCAAATCGAAGGTCAATCTTAATGAAG
AACATTATGCAAATTGAAAGCAAGACCTACAAAGATCAATGAATGAAGAA
AGTAATATGGTAAACAGTGCATTGTTtcagaagaagaagatgaagatgaa
gataaTGATATGGAAGATTTTCACACAGTGGtgcatttttaagaaaaatc
aaaataagtgAATATTTTTTGCCTAAGCAAGTAAAGGATTCTAATGGCAT
GAGTATCATACAGCAATTTGAGCAATGGGTTGAATTATTTTATGTCTTGT
TTACGGTTCTGTTTCAAATACCCCTTAAAAAACCTTTGTCATTGGTGGGG
AATTTTAGCTCTATGATTATGTAGCAACTTTTCCCCAA
Run BLAST on NCBI

transcript from alignment at sc0000025:887549..895691-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003209 ID=TCONS_00003209|Name=TCONS_00003209|organism=Clytia hemisphaerica|type=transcript|length=8143bp|location=Sequence derived from alignment at sc0000025:887549..895691- (Clytia hemisphaerica)
CTTTATTATGAATTAAGCAATATCGAAATCTCGTTAAACGGTTAGGTTCT
AAGAAATTTTACCAGGAGAAAAACATTAGAAAACAAAATGGCGAATACGA
CAGACACAGAACCTTTACTGATAGACACAGATGACAACGATTCACTACCT
TCAGCTCCAAACTTAGGCACAAATGAAAATGGTAAGATACTTTGAAATTT
CTTTGACCTTCTAAACCGTNAACTTAGGCACAAATGAAAATGGTAAGATA
CTTTGAACTTTCTTTGACCTTCTAAACTGTGTTTTAGCATTTTTGTAAAG
GCTAAATTCATTGATGGAAAACAAAAGTAAAAAGTATTGTTATTTTTTCA
TGAGAACGTAGGTGTCATTCTAACAAATCAAGAGTCCCGCGTCCTGTAGA
ATAGGAATGTACACATATCGGTAAATTTATCCTGCTGTACATCTGCATAT
AAACTATATAAATATAAACCCAGACGATCTCAATCGAACGGAACCGACAA
TCGAACCAGTCGAACCACCAAATTCCCATTATTTTGCTTCACTAACATTG
AAGCGCTTCTTTTTTTTGCACGGGAAACATGTGGTTTTGAACCGTGACCT
AAGGATTCGGCCCAAAGCGAGTAACGACGAACCAGTGACGAATCATATCC
TTTCCATACTGTTGAGAAAGTATGACGAAAGTGGTGGATTGTATGTTTTT
GGGACATCAGACACGTGCGTTTGGTTTGGGAACGCGAAACACGAACGCGA
ACTACCCATGTCTAAACTTTTCAATATATCTCCAAAACTAACAGACTTTT
TGAAATTCTGTAAAAAGGTCTAAGCTCCTGAATAGTTTTACTATGTTCTG
TGAAAAGATCATAACCATCAGTGAAATACTCGTTCATCTATTTAAGATTG
AAGACAAAAATTTGCGAAGAAAAATAAACCTTGAGCACAAAAAATGCTTT
TTTAAACACTCTACTAATTAAAGTACCGTGAGAGGTCCTAAAGCCGACAG
CCCAGCCTAAATCCGATGGGGTCTTTCAAAGATACAAACTAAAATAAAAA
CAAGCCTTTAACACTGTGACGCAACGAAGATACCAAAGTGTCAACTAAAC
TGAGAGATTTGATACATTGAACCAATTGAACCAAATAGAAATAACAATAA
TTGCTTCTTATACAAAACATAATTTTTTATTGCAATATGTACAACAGCAG
TAACACTCATCATAAAAAGTAATTACTTTTATAACAATTCACACTTTTTA
AATTACATTAATTGGCATCTTGACATTATAGCCATCTTGTTAGATGTTTT
GTTTCGAGAGCTCTTGCAATAGTTTATCGTTCAACTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATGAGATAAGATAAGATAAAACCTTAAAATCAACCAGAATT
TACAACCTTTCGTCCAAAGCAAAAGACGTGCTTTTCTCGCCGCCATCTTG
TTTTAGAATGAGAATTCTAGAGAATTCCATTCGGTTCCAACTCCTGCGGC
CTTTTTTTCATCCAATCAGATCGCGCGATTTCACTTTCGCTTTCTCTAGT
CCAATAAGACTGCGCGGGATTTGAGTCATGTGACATCTCTATTAAAAAAC
CCGCGCGAATTGAAATAGAAATACAGGTGGTCACACTACTGGCTACAGAA
ACTAAAAGCAAGCAATTTAGGCCAATATTTTTGGTTTTTCTGAAGGACAA
AAGGTATAGGAAGCTTTACTGAAAGAGGGATAAGGCTGGGACAATCTATT
TAAAAGATATGGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCCCCGTCTCGCCCCCCCCCTGATATGAGCAAGGGAACCATGTTGGCCAC
CCCTACTGAAGATTTCAGATCAAAATAAGCAAGGAATTAATTCCTGTAAC
TTGAAGAAAATTGGAAAAAGCTGGTTTTTGACTGATCCTAAAGTGCTATT
TTTTGGTAAAAGCTATGCAATTTATGTTTAGATTTCTAGAAAGCTTACCC
ATTCATTGTCAATACATTTTTTATTTGAAAGTAATCTCTTCCATGGAATA
AAAAGATATAGTCAAATCTTGTAGGGTCATTTTTAAAAAAAATTTTGCCA
AATTCGATTTTCGCATTTCGCCATTTTACCCTACGCAAACGCACGTGTAG
AGGGCGTCAAACACTCTTCTTTGATTTACGATAGAAAATTGGCTTTCTTT
AGAGTATAGAGCAATCATACGCAGTCTAAAAGCGATTAAACAGCAATCGA
ATACAGTCTAACGACAATCAAATGCAGTCGAACAACAATCGAACCAATCG
AATGCAGTCGAACACAGACAGTGAAGTCAAGTTTGAAGATATTCTTTATT
AGAAAAATGGCTAAAAGCAGTCAAAACGCAATTTACTTACCTCCTGAGTT
TGTCTTTGCTATGCTAAAATATAACAAACCTTTGTCATGCTGTCTAATTA
CAAAAACTTCCAATCACTACTTCTCTGCCATCTTGTTTCACTTTAAATGC
TGTGTTTTAAAATTCCTTAGTTACATTATATGTACGGAAAAGGTTTTCTC
CAAGTTTTTTCAATCCCGGGATTAAACTACGAGGGCGGTTTCGCCCGCTT
ATTTTTCTTTCGGCGTTGAGCCCTGGGGATACTTAACAATAAAAGAGATT
CTAAGATTAATGTTGAAATGCGTATTTTTTCTATGAATTTAGGCGATACT
CAACAAAAAATAAGGTGGTTTTAAACAAATCTTTGACAAATTGGTGTTTC
TTTCTTTTCTAATAGATGCAAATCACGTTGAAAAAAGAATATATTTCTGC
CTTTACTTTCACTTTCGCTTTCGTGTTACGCGATTTTGATTGGATGAATA
CCCCTCGCTAACAAATTCTGATTGGCAGTAAGTCTTTAGCTTCGGGATTC
TGATTGGATCATTTCCCGCGCCATGGTTGAATTTTGATTGGTTGAAAGTT
TCTGAGCGTGAATTCTGATTGGATGAATACCTGAAAAGTAAACAATAGTA
TGTAAGTATTTTGCCTATCAAAACCTAAAGATTTCTAGGGGGTTTTATTT
ACTTTGCATGACGGTAATTAAGCCTACAAAACACCAAGAAAAAAACCCAA
CATAGAACAGGTGTATTTTGTAATGCAGAATATGATAGTGTGAATCTTTT
TGAAATTCAATGTTAGGATTTTTTCTCAATGCCCCGTAACTATGCCCGGG
GTACCCGTTGCTAAGATTTTATGTTAAAAACGAAAGCTATTACGGCAAAA
ATTAATCAAAAATAGCAATTTTCATAATACCTCAAATATTGATACTTGAC
TGTACTGACAATCAAACCAATCAAATATTAATATTACCCAGAATTTTGAT
GTTCAATTGCATTCGATTTAGTTCGACTGGTTCGATCGTCGATTCAGTTG
ACGATATATCAGGATTAGAAACCAGGCTAGTCTTACCCCTTTTTTTATCT
TTCCCTTAACAACAATACAATGCTGACACATTGACACAACACATTGACAA
GTAATCCTAGCCTGAATATCCATGCTCAAAATTTTAGAAAAAACAAAATT
TACTTCAACATATACGAAGTTCTAAACTTATAGAGCTTGGTCTCCCTAGA
ATGAAAGTGCAAACCCATGTTTCCAAAACTTTCCTGGTCAACCCAGGGCA
GGCCAAACAAAAGGTAATAAAAAGGAGTCTTATAAGATCGAAAACACTTT
TACTTTCAGACGATACAAGAACACAATCGAACATTAAAACACTCGAACAC
AATTTTTATCAATCAAATCTGAAAATTGCCGTAATATTCGATTGAAATTT
GATCACGTTTGATGATCGAATTTCAATCAGCTGTTTGCATTCGTTTGCAT
TGGGTTTTCATTTTCGATTAAGCTAATCTTGGGCCTGAATGTCGACGCAA
CCAACTTCAGATTAAATTCCTCCACTAGAATTTCCTCAAATCAATGAAAT
GAGCTTCAACGTAATTATGATGACCTAAAACTCTCTGATCAAGAAATTAA
GGAACTAAAATCTATACCCAAAATCTTCTACATGAGCAAATACACAAACC
CATGCCATAGCAAAGAGATTTTGGTCAAATTTGACAAAATTGTTATTTTA
TAAGATATTTTACGCTACTATCATTGTCAGAATATATTGGCATAGGTATT
TTAGCATTTTGCAGAGTTTGGGCGAGAGTAACATGTTCAGGCTTGCTTTT
TTATCTAATAAAATATTTCGATTTGGGAGGGTTATACTGGCTTTTGGGCT
TTATTTTCAGCCTAGTGGGTCCTCAGATCCTAAGTTCTTCAATCTTTAAG
TCTCATGTTAAAACTCAACCCCTACTTGCAGTTTTTAAAATCTTGAAGTA
AATTTTTTTGTCACGCAGATGATTGTAGGACAACCCTGTATTATTAGAAT
TTTGATTTTATTAGGGCATTCTACTCAAACATAATTCTATTTGAATTGAG
ACATTCCTATATCATTTCAGGCGTGCAACAACATGCACACCCCTCCACAC
ACACCTAAAATCTCAGAGGAGTGCAATCAAGCACACACCATAAATTTAGA
CTTTACTATTAAAAGTGGTAGATAGCACGCCTTATTACATATCTAAATTA
GCAAAACTCAGATTTTAGGAGTGTGATTGATCACACGTCTGGCTTTTTTA
AATGGCAAAGCCTGCTATATAGATCGACACAAAAAAGATGATATACTATA
AAAGATGTCAACTTGAAAAGGTGTCATTCACAATTACCATAGCAACAAAA
AAAATCCAAAATAGAAATATTTCTTTTGCTGCTGGAGCATGGAATTGTTC
TCACGCCTGATTGGCCAAAATGCTCTCTGATGCAGCCATTTTTATAATTT
TTTGTGCTCTGCTACCAAAAAAGTATAGTTCAATAATATGGTGAAACCCA
GCTACAGTTGCAGTCTGTTAATGTTACTTTTATCTAATTGCATAAATAAT
TCAATAACTATATCTATAAAATGAAACTTTTTTAAAACACATTGCTTGTT
CATATAAAGGGGATGATTTCTTTTATGTTTTAATTTTAGATGGCAGCATT
GACGTCACCAACTCCTCAATAAATCAAAACAGAACAAGTGGAGATGGTGC
ACCTCCACCTTATACAGACTCTCCTCCCCCATATGAGGGGGTACCTGGGG
TGCCTGCAATTGCTGCAGCTCCCGCACCACCTGGTGTTATGGGAGAACCA
ACAGTTGTTTGCAGAGTTTGTCAGCAGTTGATTTTCATACGGGGACGTGA
AGGACAAAGAGTTGTAAAATGTTCAAACTGTCACGAAGCAACTGTAAGTT
TGTTAAGTATTGTATTGACTTAAGTGTTTTGATATTTAGAGGGTTCTCAT
GAAATGATATAATAGTTCTTTATACATGAAATGAATTTTATCTTCGTTTA
GCCAATCAAAGCACCACCTGCTGCTAAAAAATACATCAGATGTCCTTGTA
ATGCATTGCTAACATGTCGTGCTACATCTACCAGAATTTCATGCCCAAGA
CCTAATTGGTTTGTATTTAACATATATTGTCTTCTATCATTCTAATGCTC
AGTCGGATATTTGCAAATTTCTCGAAATAAATTAGATCTTATATTAGGGA
TAGAATTGACGTTATAAGCTCTAGGTCCATTATTTCAAAAAATTTCATTC
CAACAAGGGAAATCTATTGGTGCATTGTAATTGGTGCATTGTAGGCCTAA
ACTGGGTTATATTTTTATTCAAAACATTGGCTCCTTTTTTTTAAGATATG
TTTTAAACTGATTGCCAATAATTGTTTTGTTACTTTTAGTAAACGGGTGA
TAAACGTTGGTGGTACACCACCGGCTGCAACTGGCCCCATGGTGCCAAAT
GTACAAGCTGGCAATAATTCGAGAATAAGAGTTACTTGTGGGCACTGTAA
TGAAACTTTTGTGGTAAGCTGTGATGGTTTAGTTTTCTTCATATCATGAG
AGAGGTGTCTTTCAAGATAAAGCATAATTCCTAAACTTCTTATATTTAGT
GGTGTTAGAAGACTAGCAAAGTGATCTAACTTTTTTACCTACGCACATTC
GACCCAGTTCTAGTATCTATCAGATTTAGAAAAAAAGCATTCTATTTTTG
TTTGTAAGTGTTTGCTCCCATAGATTCTATAGACGCAACACAATCTTAAC
TTTTGGGTTTGTTTTTTTCTATAGTTCCGCACAACTGCTCATTTGGCAAG
ATGTCCATACTGCCGACGAGTGTAAGTCCGGTCATTATATTTTGATATGA
ATTTTAGAATTACTAATAAAAAATTATATGTATTGTTTGTCCGATTGGTT
CAATCAGTGTTTTAATCTCATATAATAAGTTATGTCAATTTTTTTAGCAA
AATGGATTTTAACTTCCTATTACTTCTTTTTTGTATAGATCTTCAGTGGG
ACCAAAATTTGCCAAGAACAGGGCCATTATTTTTGCTGCCATTGGTGTTC
TTTTCTTGACTGCTGGTGTTGGAGTTACTGTAAGAATTGTACCTTTATTG
ATCTTCTTTGAGAGATTATTCTCTACTGACAGCTATATCTAAAGTTGTGA
AGATTTGGATTTAAAGTTTTGCTATTTGTCAATTTTTCCTAATATTTTTC
TTTATATTCTCTTATTTGAGAGATTATTCTCTACTGGCGGTTTTACTAAA
GTTGTGAAGATTTGGGTTTATTTAGTTTTGCAATTTGTCAATTTTTCCTA
ATATTTTTCTTTATGTTCTCATTATCTGAAACTTTATCAATAACCTTTTA
TTATTTAAATTTTTCAGGTTGCCACTTTGGAAATTGCTCAAAAGAATGGA
GGTAATTTGCTGATATTTTCTTTGTTGTTCTTTGACTTAAAGTTTTCTTC
AAAAACAACGTTCCAAAGTTCTACCTGTTTCTGACATTTTACCTGTCAGA
ACGTTGGAATACAACCATTCTATTTTCATTTTGTTTTTCTTTTTAGGGGT
TTATGTTGTTTGGATTGGTAAGCTTTTACATTATTCTGCTGATATCTTTG
ATTATAATAATAGTTAGGCCTTGTTGTTGTTTCTGGCCTAAGCTTTACCC
AAAAATTTATCGTATTTGTAAAAAGTGCTATCCTAATGGTAGCACTATTC
GATATGGGTCAATTTATGATTCAATGAATTTCTCTGTATATCGTTATTAC
CATAATTTGAGTTGTCATCACATCGAGAGAAGTGATACCATTGGAGTTGT
AATGCTTATTTTACTTCTNTGAGTTGTCATCACATCGAGAAAAGTGATAC
CATTGGAGTTGTAATGCTTATTTTACTTCTGTGACTGTTTGTTATAAATG
AAGAACAAGGTTGTGTTGTTTTTAGCTCAACATTTTCTACATCATTTTCT
TCTTAATTTTCAAGGTGCATTTATTGTTGGATTATTAAACTTGATTCGAA
GCTGTTATTATTGCCAAATGACCGTCAGTCAAATCGAAGGTCAATCTTAA
TGAAGAACATTATGCAAATTGAAAGCAAGACCTACAAAGATCAATGAATG
AAGAAAGTAATATGGTAAACAGTGCATTGTTTCAGAAGAAGAAGATGAAG
ATGAAGATAATGATATGGAAGATTTTCACACAGTGGTGCATTTTTAAGAA
AAATCAAAATAAGTGAATATTTTTTGCCTAAGCAAGTAAAGGATTCTAAT
GGCATGAGTATCATACAGCAATTTGAGCAATGGGTTGAATTATTTTATGT
CTTGTTTACGGTTCTGTTTCAAATACCCCTTAAAAAACCTTTGTCATTGG
TGGGGAATTTTAGCTCTATGATTATGTAGCAACTTTTCCCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001772XLOC_001772Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003209-exon-sc0000025-1575043694:895511..895691TCONS_00003209-exon-sc0000025-1575043694:895511..895691Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:890049..890302TCONS_00003209-exon-sc0000025-1575043694:890049..890302Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:889834..889940TCONS_00003209-exon-sc0000025-1575043694:889834..889940Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:889429..889552TCONS_00003209-exon-sc0000025-1575043694:889429..889552Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:889121..889167TCONS_00003209-exon-sc0000025-1575043694:889121..889167Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:888863..888953TCONS_00003209-exon-sc0000025-1575043694:888863..888953Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:888541..888574TCONS_00003209-exon-sc0000025-1575043694:888541..888574Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:888375..888395TCONS_00003209-exon-sc0000025-1575043694:888375..888395Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1575043694:887549..887977TCONS_00003209-exon-sc0000025-1575043694:887549..887977Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:895511..895691TCONS_00003209-exon-sc0000025-1510915933:895511..895691Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:890049..890302TCONS_00003209-exon-sc0000025-1510915933:890049..890302Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:889834..889940TCONS_00003209-exon-sc0000025-1510915933:889834..889940Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:889429..889552TCONS_00003209-exon-sc0000025-1510915933:889429..889552Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:889121..889167TCONS_00003209-exon-sc0000025-1510915933:889121..889167Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:888863..888953TCONS_00003209-exon-sc0000025-1510915933:888863..888953Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:888541..888574TCONS_00003209-exon-sc0000025-1510915933:888541..888574Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:888375..888395TCONS_00003209-exon-sc0000025-1510915933:888375..888395Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1510915933:887549..887977TCONS_00003209-exon-sc0000025-1510915933:887549..887977Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:895511..895691TCONS_00003209-exon-sc0000025-1491911889:895511..895691Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:890049..890302TCONS_00003209-exon-sc0000025-1491911889:890049..890302Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:889834..889940TCONS_00003209-exon-sc0000025-1491911889:889834..889940Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:889429..889552TCONS_00003209-exon-sc0000025-1491911889:889429..889552Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:889121..889167TCONS_00003209-exon-sc0000025-1491911889:889121..889167Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:888863..888953TCONS_00003209-exon-sc0000025-1491911889:888863..888953Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:888541..888574TCONS_00003209-exon-sc0000025-1491911889:888541..888574Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:888375..888395TCONS_00003209-exon-sc0000025-1491911889:888375..888395Clytia hemisphaericaexon
TCONS_00003209-exon-sc0000025-1491911889:887549..887977TCONS_00003209-exon-sc0000025-1491911889:887549..887977Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:887549..895691 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.6623	35.802	104.615	84.9201	29.8392	29.7649	67.4574	51.3016	91.3009	79.3559	92.1307	73.4098	83.2731	57.8921	79.2585	78.124	75.8837	86.6278	103.84	138.581	104.621	89.6873	67.3721	79.6253	73.4675	58.6599	98.6869	103.883	102.73	84.3314
Blast
[Close]
BLAST of TCONS_00003209 vs. Swiss-Prot (Human)
Match: TM55B (Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase OS=Homo sapiens GN=TMEM55B PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 6.987e-47
Identity = 90/198 (45.45%), Postives = 121/198 (61.11%), Query Frame = 1 
Query:  340 PTVVCRVCQQLIFIRGREGQRVVKCSNCHEATXXXXXXXXXXYIRCPCNALLTCRATSTRISCPRPNCKRVINVGGTPPAATGPMVPNVQAGNNSRIRVTCGHCNETFVFR--TTAHLARCPYCRRVSSVGPKFAKNRAIIFAAIGVLFLTAGVGVTVATLEIAQKNGGVYVVWIGAFIVGLLNLIRSCYYCQMTVSQ 927
            P + CRVCQ LI + G+  Q VVKC  C+EATPIK  P  KKY+RCPCN LL C+ TS RI+CPRP CKR+IN+G   P   GP+ P  Q      +RV CGHC  TF++   T   LARCP+CR+VSS+G ++ + R I    +G+L      G+   T + A++ GG+Y  W    ++ +L L R+ Y+  M VS 
Sbjct:   80 PMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLG---PVHPGPLSPEPQPMG---VRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLLGLLLAVTATGLAFGTWKHARRYGGIYAAWAFVILLAVLCLGRALYWACMKVSH 271
The following BLAST results are available for this feature:
BLAST of TCONS_00003209 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM55B6.987e-4745.45Type 1 phosphatidylinositol 4,5-bisphosphate 4-pho... [more]
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