XLOC_001772 (gene) - C. hemisphaerica

Overview
NameXLOC_001772
Unique NameXLOC_001772
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:887549..895700-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001772 ID=XLOC_001772|Name=XLOC_001772|organism=Clytia hemisphaerica|type=gene|length=8152bp|location=Sequence derived from alignment at sc0000025:887549..895700- (Clytia hemisphaerica)
TACGGAATTCTTTATTATGAATTAAGCAATATCGAAATCTCGTTAAACGG TTAGGTTCTAAGAAATTTTACCAGGAGAAAAACATTAGAAAACAAAATGG CGAATACGACAGACACAGAACCTTTACTGATAGACACAGATGACAACGAT TCACTACCTTCAGCTCCAAACTTAGGCACAAATGAAAATGGTAAGATACT TTGAAATTTCTTTGACCTTCTAAACCGTNAACTTAGGCACAAATGAAAAT GGTAAGATACTTTGAACTTTCTTTGACCTTCTAAACTGTGTTTTAGCATT TTTGTAAAGGCTAAATTCATTGATGGAAAACAAAAGTAAAAAGTATTGTT ATTTTTTCATGAGAACGTAGGTGTCATTCTAACAAATCAAGAGTCCCGCG TCCTGTAGAATAGGAATGTACACATATCGGTAAATTTATCCTGCTGTACA TCTGCATATAAACTATATAAATATAAACCCAGACGATCTCAATCGAACGG AACCGACAATCGAACCAGTCGAACCACCAAATTCCCATTATTTTGCTTCA CTAACATTGAAGCGCTTCTTTTTTTTGCACGGGAAACATGTGGTTTTGAA CCGTGACCTAAGGATTCGGCCCAAAGCGAGTAACGACGAACCAGTGACGA ATCATATCCTTTCCATACTGTTGAGAAAGTATGACGAAAGTGGTGGATTG TATGTTTTTGGGACATCAGACACGTGCGTTTGGTTTGGGAACGCGAAACA CGAACGCGAACTACCCATGTCTAAACTTTTCAATATATCTCCAAAACTAA CAGACTTTTTGAAATTCTGTAAAAAGGTCTAAGCTCCTGAATAGTTTTAC TATGTTCTGTGAAAAGATCATAACCATCAGTGAAATACTCGTTCATCTAT TTAAGATTGAAGACAAAAATTTGCGAAGAAAAATAAACCTTGAGCACAAA AAATGCTTTTTTAAACACTCTACTAATTAAAGTACCGTGAGAGGTCCTAA AGCCGACAGCCCAGCCTAAATCCGATGGGGTCTTTCAAAGATACAAACTA AAATAAAAACAAGCCTTTAACACTGTGACGCAACGAAGATACCAAAGTGT CAACTAAACTGAGAGATTTGATACATTGAACCAATTGAACCAAATAGAAA TAACAATAATTGCTTCTTATACAAAACATAATTTTTTATTGCAATATGTA CAACAGCAGTAACACTCATCATAAAAAGTAATTACTTTTATAACAATTCA CACTTTTTAAATTACATTAATTGGCATCTTGACATTATAGCCATCTTGTT AGATGTTTTGTTTCGAGAGCTCTTGCAATAGTTTATCGTTCAACTTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNATGAGATAAGATAAGATAAAACCTTAAAATCA ACCAGAATTTACAACCTTTCGTCCAAAGCAAAAGACGTGCTTTTCTCGCC GCCATCTTGTTTTAGAATGAGAATTCTAGAGAATTCCATTCGGTTCCAAC TCCTGCGGCCTTTTTTTCATCCAATCAGATCGCGCGATTTCACTTTCGCT TTCTCTAGTCCAATAAGACTGCGCGGGATTTGAGTCATGTGACATCTCTA TTAAAAAACCCGCGCGAATTGAAATAGAAATACAGGTGGTCACACTACTG GCTACAGAAACTAAAAGCAAGCAATTTAGGCCAATATTTTTGGTTTTTCT GAAGGACAAAAGGTATAGGAAGCTTTACTGAAAGAGGGATAAGGCTGGGA CAATCTATTTAAAAGATATGGACAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCCCCCGTCTCGCCCCCCCCCTGATATGAGCAAGGGAACCAT GTTGGCCACCCCTACTGAAGATTTCAGATCAAAATAAGCAAGGAATTAAT TCCTGTAACTTGAAGAAAATTGGAAAAAGCTGGTTTTTGACTGATCCTAA AGTGCTATTTTTTGGTAAAAGCTATGCAATTTATGTTTAGATTTCTAGAA AGCTTACCCATTCATTGTCAATACATTTTTTATTTGAAAGTAATCTCTTC CATGGAATAAAAAGATATAGTCAAATCTTGTAGGGTCATTTTTAAAAAAA ATTTTGCCAAATTCGATTTTCGCATTTCGCCATTTTACCCTACGCAAACG CACGTGTAGAGGGCGTCAAACACTCTTCTTTGATTTACGATAGAAAATTG GCTTTCTTTAGAGTATAGAGCAATCATACGCAGTCTAAAAGCGATTAAAC AGCAATCGAATACAGTCTAACGACAATCAAATGCAGTCGAACAACAATCG AACCAATCGAATGCAGTCGAACACAGACAGTGAAGTCAAGTTTGAAGATA TTCTTTATTAGAAAAATGGCTAAAAGCAGTCAAAACGCAATTTACTTACC TCCTGAGTTTGTCTTTGCTATGCTAAAATATAACAAACCTTTGTCATGCT GTCTAATTACAAAAACTTCCAATCACTACTTCTCTGCCATCTTGTTTCAC TTTAAATGCTGTGTTTTAAAATTCCTTAGTTACATTATATGTACGGAAAA GGTTTTCTCCAAGTTTTTTCAATCCCGGGATTAAACTACGAGGGCGGTTT CGCCCGCTTATTTTTCTTTCGGCGTTGAGCCCTGGGGATACTTAACAATA AAAGAGATTCTAAGATTAATGTTGAAATGCGTATTTTTTCTATGAATTTA GGCGATACTCAACAAAAAATAAGGTGGTTTTAAACAAATCTTTGACAAAT TGGTGTTTCTTTCTTTTCTAATAGATGCAAATCACGTTGAAAAAAGAATA TATTTCTGCCTTTACTTTCACTTTCGCTTTCGTGTTACGCGATTTTGATT GGATGAATACCCCTCGCTAACAAATTCTGATTGGCAGTAAGTCTTTAGCT TCGGGATTCTGATTGGATCATTTCCCGCGCCATGGTTGAATTTTGATTGG TTGAAAGTTTCTGAGCGTGAATTCTGATTGGATGAATACCTGAAAAGTAA ACAATAGTATGTAAGTATTTTGCCTATCAAAACCTAAAGATTTCTAGGGG GTTTTATTTACTTTGCATGACGGTAATTAAGCCTACAAAACACCAAGAAA AAAACCCAACATAGAACAGGTGTATTTTGTAATGCAGAATATGATAGTGT GAATCTTTTTGAAATTCAATGTTAGGATTTTTTCTCAATGCCCCGTAACT ATGCCCGGGGTACCCGTTGCTAAGATTTTATGTTAAAAACGAAAGCTATT ACGGCAAAAATTAATCAAAAATAGCAATTTTCATAATACCTCAAATATTG ATACTTGACTGTACTGACAATCAAACCAATCAAATATTAATATTACCCAG AATTTTGATGTTCAATTGCATTCGATTTAGTTCGACTGGTTCGATCGTCG ATTCAGTTGACGATATATCAGGATTAGAAACCAGGCTAGTCTTACCCCTT TTTTTATCTTTCCCTTAACAACAATACAATGCTGACACATTGACACAACA CATTGACAAGTAATCCTAGCCTGAATATCCATGCTCAAAATTTTAGAAAA AACAAAATTTACTTCAACATATACGAAGTTCTAAACTTATAGAGCTTGGT CTCCCTAGAATGAAAGTGCAAACCCATGTTTCCAAAACTTTCCTGGTCAA CCCAGGGCAGGCCAAACAAAAGGTAATAAAAAGGAGTCTTATAAGATCGA AAACACTTTTACTTTCAGACGATACAAGAACACAATCGAACATTAAAACA CTCGAACACAATTTTTATCAATCAAATCTGAAAATTGCCGTAATATTCGA TTGAAATTTGATCACGTTTGATGATCGAATTTCAATCAGCTGTTTGCATT CGTTTGCATTGGGTTTTCATTTTCGATTAAGCTAATCTTGGGCCTGAATG TCGACGCAACCAACTTCAGATTAAATTCCTCCACTAGAATTTCCTCAAAT CAATGAAATGAGCTTCAACGTAATTATGATGACCTAAAACTCTCTGATCA AGAAATTAAGGAACTAAAATCTATACCCAAAATCTTCTACATGAGCAAAT ACACAAACCCATGCCATAGCAAAGAGATTTTGGTCAAATTTGACAAAATT GTTATTTTATAAGATATTTTACGCTACTATCATTGTCAGAATATATTGGC ATAGGTATTTTAGCATTTTGCAGAGTTTGGGCGAGAGTAACATGTTCAGG CTTGCTTTTTTATCTAATAAAATATTTCGATTTGGGAGGGTTATACTGGC TTTTGGGCTTTATTTTCAGCCTAGTGGGTCCTCAGATCCTAAGTTCTTCA ATCTTTAAGTCTCATGTTAAAACTCAACCCCTACTTGCAGTTTTTAAAAT CTTGAAGTAAATTTTTTTGTCACGCAGATGATTGTAGGACAACCCTGTAT TATTAGAATTTTGATTTTATTAGGGCATTCTACTCAAACATAATTCTATT TGAATTGAGACATTCCTATATCATTTCAGGCGTGCAACAACATGCACACC CCTCCACACACACCTAAAATCTCAGAGGAGTGCAATCAAGCACACACCAT AAATTTAGACTTTACTATTAAAAGTGGTAGATAGCACGCCTTATTACATA TCTAAATTAGCAAAACTCAGATTTTAGGAGTGTGATTGATCACACGTCTG GCTTTTTTAAATGGCAAAGCCTGCTATATAGATCGACACAAAAAAGATGA TATACTATAAAAGATGTCAACTTGAAAAGGTGTCATTCACAATTACCATA GCAACAAAAAAAATCCAAAATAGAAATATTTCTTTTGCTGCTGGAGCATG GAATTGTTCTCACGCCTGATTGGCCAAAATGCTCTCTGATGCAGCCATTT TTATAATTTTTTGTGCTCTGCTACCAAAAAAGTATAGTTCAATAATATGG TGAAACCCAGCTACAGTTGCAGTCTGTTAATGTTACTTTTATCTAATTGC ATAAATAATTCAATAACTATATCTATAAAATGAAACTTTTTTAAAACACA TTGCTTGTTCATATAAAGGGGATGATTTCTTTTATGTTTTAATTTTAGAT GGCAGCATTGACGTCACCAACTCCTCAATAAATCAAAACAGAACAAGTGG AGATGGTGCACCTCCACCTTATACAGACTCTCCTCCCCCATATGAGGGGG TACCTGGGGTGCCTGCAATTGCTGCAGCTCCCGCACCACCTGGTGTTATG GGAGAACCAACAGTTGTTTGCAGAGTTTGTCAGCAGTTGATTTTCATACG GGGACGTGAAGGACAAAGAGTTGTAAAATGTTCAAACTGTCACGAAGCAA CTGTAAGTTTGTTAAGTATTGTATTGACTTAAGTGTTTTGATATTTAGAG GGTTCTCATGAAATGATATAATAGTTCTTTATACATGAAATGAATTTTAT CTTCGTTTAGCCAATCAAAGCACCACCTGCTGCTAAAAAATACATCAGAT GTCCTTGTAATGCATTGCTAACATGTCGTGCTACATCTACCAGAATTTCA TGCCCAAGACCTAATTGGTTTGTATTTAACATATATTGTCTTCTATCATT CTAATGCTCAGTCGGATATTTGCAAATTTCTCGAAATAAATTAGATCTTA TATTAGGGATAGAATTGACGTTATAAGCTCTAGGTCCATTATTTCAAAAA ATTTCATTCCAACAAGGGAAATCTATTGGTGCATTGTAATTGGTGCATTG TAGGCCTAAACTGGGTTATATTTTTATTCAAAACATTGGCTCCTTTTTTT TAAGATATGTTTTAAACTGATTGCCAATAATTGTTTTGTTACTTTTAGTA AACGGGTGATAAACGTTGGTGGTACACCACCGGCTGCAACTGGCCCCATG GTGCCAAATGTACAAGCTGGCAATAATTCGAGAATAAGAGTTACTTGTGG GCACTGTAATGAAACTTTTGTGGTAAGCTGTGATGGTTTAGTTTTCTTCA TATCATGAGAGAGGTGTCTTTCAAGATAAAGCATAATTCCTAAACTTCTT ATATTTAGTGGTGTTAGAAGACTAGCAAAGTGATCTAACTTTTTTACCTA CGCACATTCGACCCAGTTCTAGTATCTATCAGATTTAGAAAAAAAGCATT CTATTTTTGTTTGTAAGTGTTTGCTCCCATAGATTCTATAGACGCAACAC AATCTTAACTTTTGGGTTTGTTTTTTTCTATAGTTCCGCACAACTGCTCA TTTGGCAAGATGTCCATACTGCCGACGAGTGTAAGTCCGGTCATTATATT TTGATATGAATTTTAGAATTACTAATAAAAAATTATATGTATTGTTTGTC CGATTGGTTCAATCAGTGTTTTAATCTCATATAATAAGTTATGTCAATTT TTTTAGCAAAATGGATTTTAACTTCCTATTACTTCTTTTTTGTATAGATC TTCAGTGGGACCAAAATTTGCCAAGAACAGGGCCATTATTTTTGCTGCCA TTGGTGTTCTTTTCTTGACTGCTGGTGTTGGAGTTACTGTAAGAATTGTA CCTTTATTGATCTTCTTTGAGAGATTATTCTCTACTGACAGCTATATCTA AAGTTGTGAAGATTTGGATTTAAAGTTTTGCTATTTGTCAATTTTTCCTA ATATTTTTCTTTATATTCTCTTATTTGAGAGATTATTCTCTACTGGCGGT TTTACTAAAGTTGTGAAGATTTGGGTTTATTTAGTTTTGCAATTTGTCAA TTTTTCCTAATATTTTTCTTTATGTTCTCATTATCTGAAACTTTATCAAT AACCTTTTATTATTTAAATTTTTCAGGTTGCCACTTTGGAAATTGCTCAA AAGAATGGAGGTAATTTGCTGATATTTTCTTTGTTGTTCTTTGACTTAAA GTTTTCTTCAAAAACAACGTTCCAAAGTTCTACCTGTTTCTGACATTTTA CCTGTCAGAACGTTGGAATACAACCATTCTATTTTCATTTTGTTTTTCTT TTTAGGGGTTTATGTTGTTTGGATTGGTAAGCTTTTACATTATTCTGCTG ATATCTTTGATTATAATAATAGTTAGGCCTTGTTGTTGTTTCTGGCCTAA GCTTTACCCAAAAATTTATCGTATTTGTAAAAAGTGCTATCCTAATGGTA GCACTATTCGATATGGGTCAATTTATGATTCAATGAATTTCTCTGTATAT CGTTATTACCATAATTTGAGTTGTCATCACATCGAGAGAAGTGATACCAT TGGAGTTGTAATGCTTATTTTACTTCTNTGAGTTGTCATCACATCGAGAA AAGTGATACCATTGGAGTTGTAATGCTTATTTTACTTCTGTGACTGTTTG TTATAAATGAAGAACAAGGTTGTGTTGTTTTTAGCTCAACATTTTCTACA TCATTTTCTTCTTAATTTTCAAGGTGCATTTATTGTTGGATTATTAAACT TGATTCGAAGCTGTTATTATTGCCAAATGACCGTCAGTCAAATCGAAGGT CAATCTTAATGAAGAACATTATGCAAATTGAAAGCAAGACCTACAAAGAT CAATGAATGAAGAAAGTAATATGGTAAACAGTGCATTGTTTCAGAAGAAG AAGATGAAGATGAAGATAATGATATGGAAGATTTTCACACAGTGGTGCAT TTTTAAGAAAAATCAAAATAAGTGAATATTTTTTGCCTAAGCAAGTAAAG GATTCTAATGGCATGAGTATCATACAGCAATTTGAGCAATGGGTTGAATT ATTTTATGTCTTGTTTACGGTTCTGTTTCAAATACCCCTTAAAAAACCTT TGTCATTGGTGGGGAATTTTAGCTCTATGATTATGTAGCAACTTTTCCCC AA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003210TCONS_00003210Clytia hemisphaericatranscript
TCONS_00003209TCONS_00003209Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003210-proteinTCONS_00003210-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:887549..895700 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM55Btype 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform 1 Homo Sapiens
TMEM55Atype 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
50.47 47.36 118.01 115.68 51.26 42.4 77.61 79.9 97.95 91.74 100.14 83.94 85.9 76.96 83.74 82.93 90.71 92.7 103.84 138.58 104.62 100.85 71.89 87.85 98.95 96.85 120.33 115.43 102.73 97.75