TCONS_00003188 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003188
Unique NameTCONS_00003188
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2585

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003188 ID=TCONS_00003188|Name=TCONS_00003188|organism=Clytia hemisphaerica|type=transcript|length=2585bp
tttacagaAATCTTGCATCACcgataaagaaaacaaaaaagttttgaatg
tcGAAAATATGAAGATCAAATCAATTTTTGCTCCCCAAGGAATGTACCTA
ACTATTAAAAAGAAGGAGAAAGGGGACCTCAGGCGCCTCCGTGGACCCCA
TGTTTGGTCACACCAAAATCTCTTTGATGGTGCAGAAAAGATTATCATTC
AAACTCAAGAACAATTCTTAAAAACCAATCCCTCTTTGAGAATGAATGAA
CTGGATTTCTACTTTATCAATTTCAGAACCACAACAAACAAAGAAGACAA
AGTTGGGAAGAATGTTACAAATGAAGATTCAAAGACGAAAAACGGGCCCG
TTGGAGATTGGACAGATACTATTTCCAAGCGTCACATATGTGTTAGAGGC
AGAAAAGACAATGGcggtaaaaaaataataaaaggtGTACCAGTTGATGA
GTCAAGCATCAATATTTATGTTCCTGATGGAGTAAGAGTGAAATTGAAGA
ATACGCAATGTGGCAACAAAGGCAACAAAacagaagaaaagaaagagaaC
GTCACCACCATTAAAGGACCACAATGGATTTATTTACAAGaCTATCCCGA
AGTACATAAAGTGATTTTGTTGAACGCCGCAAAGGATGATAACGAGGAAC
GCAATGAAGATGACGATATTATTGATCCTCCAACCGATGGCGAcaatgat
gaagatgaagatgacgacgaagatgatgatgatgaagatgatCAAATGTC
CTATTGTACTAAGGATGATGATTGTGTGTATGGCAAAACCATTTCAGAAT
TGCTAAACCAGGTTGGTAAACCAAACAGAATGTTGGGTTCCAAAGTATAC
GTTAACGTCACCATTCCTGATGGATGTTATTTAGAAACACGCATTGCTCC
TACAACGGGGAAGAAAAAGGCTAATGAAGACGTTTGCGAGATACCAGTAC
CTTCAATCCGTGGTGAAATCACCAAGACTATGACAGAGATGTTAAACATT
TTCGAAAAGAAGCAGAGAGATATTAAATTGAAATGTGATGACGATGAAGA
TgatgacgatgatgatgacgaCGACAAGGAGgataaaacaataaaagatg
aCGGCACAAATAAGTCGGCACAACGTAAATCATACCTCATGACGTACGGC
TCACCAGAATTCGTCGCATCTAACCCAAACTTTGATGCACCAAACTTGAT
GGTTGAAGATGCTTACACCAAAGCTTATCACAAGTCAACCAACCATCATC
CATTTCATCCGAGAcgaaaacatcaacaaaatgcACAAATTTAAAACAGA
TTTGATGCTAGAAATTTAAACCGATGGGTATGTCGAAAAATACTCAAACT
TTAACCAATGGATGTGTcgcaagaaaaacaaaaaaagtaaaaaaaaacaa
tggatTTGTCGTAAAATACTCAAATTAAAACAATGGATTTGTCGTAAAAT
ACTCAAATTAAAACAATGAATTTGTCGTAAAATATTCAATGAATTCGTCG
CAAAGTACTCTAAATTAAAACAATGAATTTGTCGTAAAATACTCAAATTA
AAACAATGAATTTGTCGTAAAATACTCAAATTAAAACAATGAATTTGTCG
TAAAATACTTATATTCAAAACAATGAATTTGTCGTAAAATACTCAAAATC
AAACAATGATTTTGTCGTAAAATACTCAAATTAAACAATGGATATGTCGT
GAAATACTCAAAACAATGGATTTGTCGCAAAGTACTCAAATTAAAAGAAT
GAATTTGTCGTAAAGTACTCAAAATCAAACAATGAATTTGTcgtaaaata
ttcaaaacaatgGATATGTCGCAAAGTActcaaattaaaagaatcaaTTT
GTCGTAAAATACTCAAAATCAAACAATGAATTTGTcgtaaaatattcaaa
acaatgaatttgtcgtaaaaaaactcaaaatcaaaCAATGAATTTGCTgc
aaaatactcaaaattttattaaactttgaatTTTGATAATACTCAAATAT
GAATTTGTCGTAAAATActcaaaattaaaacaatgGATTTGTCGTAAAAT
ACTCAAATTTAAACCATGAATTTGTCGCAAAATActcaaaattaaaacaa
tgGATTTGTCataaaatacccaaaataaAGGAATAGAATGATTTGATTTG
TCGCAAAATAATTTGTACTTTGATAAAGattcataaaagaaaaaaaaact
atttattaATTGACGCGACCAATTTAATTTTCAGCGATTCACATCTATAC
TACTTATATTTCAATCAGACCTTTGACATCTACTGTTTCAAAAAAACATA
CACTAAAATTAGTAGTTTTTTGAAACAGTACGAGCCTACGACctatgaaa
ttttcacagtgctTATACTGTAGAGAAATTCATATTTAGCCTGGGTTCCT
TGAAAATAACAGATATTAAATTGGTCGAGCAATAACAAATATTCATATTT
ATCTACTATATTTTAGTTTCAAATTatattatgaaatatttattttttga
ttgtcGTAATATTTATATTTAGTCATAAAAAGGATAATTAAggtatattt
ttatttgattatattGTTGAAAGACTATATTAGAG
Run BLAST on NCBI

transcript from alignment at sc0000025:518032..530245-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003188 ID=TCONS_00003188|Name=TCONS_00003188|organism=Clytia hemisphaerica|type=transcript|length=12214bp|location=Sequence derived from alignment at sc0000025:518032..530245- (Clytia hemisphaerica)
TTTACAGAAATCTTGCATCACCGATAAAGAAAACAAAAAAGTTTTGAATG
TCGAAAATATGAAGATCAAATCAATTTTTGCTCCCCAAGGAATGTACCTA
ACTATTAAAAAGAAGGAGAAAGGGGACCTCAGGCGCCTCCGTGGACCCCA
TGTTTGGTCACACCAAAATCTCTTTGATGGTGCAGAAAAGATTATCATTC
AAACTCAAGAACAATTCTTAAAAACCAATCCCTCTTTGAGAATGAATGAA
CTGGATTTCTACTTTATCAATTTCAGTAAGTTCCATCTAAACTTCTAGTT
TTTTTTTGAAATTCTTTTACAGAGTGGACAAAAATCATACAGTTGAATCT
CAATAAGTACTCTCTGGCGACCGGTTATAAAATGGTATTACTTATCACCT
CCTACTCACCCGTATCTCCTTCCGTCGTTTAGCATAATTTACAGGAAAAA
ATAGATTCTCCAGAACTTCTCTATAGGATGCTTATGTCTCAGAAAAAAAT
CCCCTAAAATCCTATAGAAAAGGTCTGGAGAAAGTTTCAGCTATATATTA
TTTATTTCCTGTCTGTATTTTTGTAAGACGATAACACTATAAGGAAGTTC
AAGGGAAAGAAGAAAAATGATAGTAATTAGCTGTGTACTATTTATCCGAA
TACTACTTATGGTTATGTATGTCCAACTGTATAAATAAAGGAATTGAATA
TCTATTGATTGGACAATGCAATTCCATCTTATCTCAATCCTTCTAAAACT
CCAAGTGAGAGGAGAGGTTTCAAGGATTTTAATATTTTCCACTTTACTTC
CGGACGCACTGTAAAATGTATGAGGAAATTGGACAGGGGATATTTAATGT
ACTGTCGCTGACTGTGCTATAATACATCATGAATGAGGTGAGAGTGCGCT
GGCCTTGTTCCCTAATGGTTCGCGCCGGATTAACGCACTTGATCCGAAAA
CTGTTTGTAAGTATTTCGCAAGCTGACAGGCAGTATAAAAAACTACAACG
CGTAAGAAGGTTCTAACGAGACGGTTTCTAGACCTCTCAACACAGAACCG
GTCATCCTCTGTAAAGAGAAGCCAGTCATCAATCAATCATTCATTCATAA
CATTAAAAGATAATTAATTCGTAACAAAATTGTGCTCCTCTACACAGATT
TTCCGACACCCCTGAGAACGCGCTACACTAGGTTCGATTTATCCTATTTC
TAAATTTTTTTCTAGGGGAGGGGCAATTGTCCAGGGGGGACTGTCCGGGT
CTTAGAATCGTAAATATATAATATTCTTTTTTGTATCAAAGGAACCACAA
CAAACAAAGAAGACAAAGTTGGGAAGAATGTTACAAATGAAGGTTTGAAA
GCATTTTGTTTGTTGCTGCTGCACCCATGTCTTAGTGATCCAGCTGATGA
AGGGGCGAATGCCGATGGGGTGGAAAATATCGATCTTTTAATAAGGAACT
CAAAGTAAAAATCTACCAAAGTCTTAGCGTCATTCCTGACGAGAATAAAA
GTTCAGATTTCCGATAGGAATAAAATATCACAGAAAATTGCCACACAGTG
ATATAGACATGGGTGTTCATTTCTTTTATAACGAAATAGACACCCTCCAG
ATCTTGGCACTGTATTTAAAATAGATTTTCTTTAGAAGAATTAGGTTTTA
ATGCATATTACAATAGGAACGAACTGTTTCAAACAGTGCGGCAAAACAAG
TGGAGCGTGCCCACAATTTTGTGGAGAAGGTGTTTGTTGTCGAAAGTTTT
GGAATAACGAGCCCGGATGTAAGAATGCAGAAAACCCCTGTGAAGGATAC
CATTGCTGTTCAACAGTTTCTTCTACAGCCTCTGGTATTTATAATAGTTT
TTTAAATTACCGTATTACTTCTGTTCAACGCCATCCTCAAATGAACACCA
ATCTGAAAAACTTAATAAACGTCCGGGGCTTTTATTCAAAGTAATACAGC
ACCCGATTTCTTCATAGTCCAACGTGCACAACGCACTGGGCTCAACTTCA
GTAGTTTCAAATTATTCAAAGGCCCGATTGTAGCAAAACGAACTAACTTT
AAAACTCATCATTGAACTCACTAAAGATATACCTTATTTAATAAAGATCA
GTTAATCTCAAAAAGATTATAACAGTAAACATTTTCGATTTCAATGCTAG
TTTTAAGGGCTCTGACCATAGTGAACTTTTAATATTTGACACGTACAAAA
TATAAATTTCTACTTGATGTAGCACACAAAACTGTGGCATGTTACACATT
TTCTGTTTATAGATCAATTATCCATGAGTCTCAAAATTTAAGAATCGCAA
TGGAAAAATTTGATGAAGAAGAAAATGAAGACTTTTGTGAAGAAGAGTAT
TTCAACTTTGAAGAGCTTATTTTCGGCGAAAAACGAAAAAAAAACTTTTT
TTTGCGGTAGATGGTGTATATCTTTTACCGAACCAAAAATAGATTTTCGG
AAAATTTTTCTAAAAGCTTATTTGTCTCGAAATCTTGAAAATGGTGCTTT
TTGACCAATTTTTCATCCCAATTTTTCATAGAAAAACAGCCATAACTTTT
GATGCATTAATTTAGAAACATGAAAACATTATTGTTTGAATTAAGATCGA
CAAAAAAGTAGGCCGTTAAACCAGTGCCGATCTTTTGCCGCACTTTTTAA
TTAGTTTATATGGCCGCTTTTTTGCCGTGTCTAATTCACATAACTTCATC
AAAAAAACTAAGTCGAATTGAGTGCGGCAAAAGAGCGGCTGTATGAACCG
AATTTTGATTTGAGGTCTACCTTAACAATTGAACACGGCAAATTTTTCCG
AACTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTTTTTAAA
ATGTGTTTTCTGACTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTATACTGTCAATCTCAATTAATATCGAACTTTTGCCTCATTT
TTGCCGATTTTATATATTTGAATTAGACACGGCAAAAAACCGGCCATATA
AACTACGCCTAAACTACGCCTAATTGGTTAAGCCGAATGAACAAAACTAT
GAGTGTCGCCCAGTAGCGTGGTTGGTCGACTAAAATTCGGGCAAACTGAG
GAGGCAGTTGTAGAGGAATTTGATTTTGGTGCCCCCTATTAAAAGAAAAT
ATCATTGTAAAAATTATGCGAGCGAAGCGAACACGAAAACTTTTGGGGTA
TTTTCTCTCTTTTTGGCTGAAAACTGCCATATCTAAGGTGTGAAAGAGCA
AAGGGGGCGCCGTAATTAGTAATCAGCGGCGACTTTTTTGCGTTCTTTGT
ATTTCGGCCCCCCGCCAAAAAAAAAATCGTCCGCTGGGGGGGACAGCACC
ACGTTACTGATGCCGCCTTGAAAATGAAAATCTCACATAAACCTCAACGG
CTCCACAAATCAGAAATGTGGTAATGCTATATAAACCACAAGATATTTAT
AAAGATATCCTTTTTTTAGATTCAAAGACGAAAAACGGGCCCGTTGGAGG
TACGCGATATTATATATGTTGGCGAGAAAAAAAATTAATTTCTTTGTTGT
TAGGCTTTGGCCAAAATTGACACTAATGTTCTTATATAAAGTTGTTGTTG
TATAAGAAAAGCTTGTCAATACAGTGTGCATACTGCCATGGTATACTTGT
CCCTCAAAGTCGCTAATACATAAACAAAATATAATTCAGAGTATATTCTT
AACTTCAGATTGGACAGATACTATTTCCAAGCGTCACATATGTGTTAGAG
GCAGAAAAGACAATGGCGGTAAAAAAATAATAAAAGGTGTACCAGTTGAT
GAGTCAAGCATCAATATTTATGTTCCTGATGGAGTAAGAGTGAAATTGAA
GAATACGCAATGTGGCAACAAAGGCAACAAAACAGAAGAAAAGAAAGAGA
ACGTCACCACCATTAAAGGACCACAATGGATTTATTTACAAGGTAAAAAG
TTGTATGACAACATACCTTAAGGAAAGAAATTTTGGCCGGAAAAAGTTTT
CGCAGAATTTAATTTCGCGGCTCACAGCTCAAAATTCGCGCAATTAAGAG
AATTTTTTGTTTACAAAATAACCTATTTTGCCCAAAACTTGTTCCGCGAA
AGTTTCTTCCCTTGAGGTACACGTGAAAAGTAATCGATCTTAAACACTAC
CGTATGTCCGAATAAAAATGTAAACATTTACAAAATGCAAAGGGTGATTA
TCCTTAACCGAGCAAAGAAGTGAACCTCAAGGTCATTTTCTTGAAACCCT
TATCTTTTCGTAGGCAAAAATGGTAAAATTTGTTACCCCAGAAACGTCGC
TTTTTCACTTTTTACAACCTTAAGCACCTAAGGCACTTTGCGAAGCCTGA
AAATTGTACCCTATGGGCCATACACTTACGGCAGGACTCCCTCCCTGAAT
GGACAAAACATCATATGTTTTTTTATGATATCATTAGTTTTGTATCAATC
GGAGTAAACATCCCTTAGAATGTAGTCAGAATGTCAGATGTGATGTCTAA
CAGTATAACCAACGTTCAACAAGTTTTCACTACACTTATACAGGGTGTCC
CTAATTAAAGTATCGAGTCGAAACACAACTATGAGTAGAAAGTTTTATGT
GCGTGTTCACAAAATTGTATTTTAAGCTCTCCCTCTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCTGTGTGATGGAGAACGTTCTTATATTTTAGCGATAACACACA
CAAACTTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAATTAGGGA
CACCCTGTACAAACGCCTGATTGCAAACAACTTAAGTTTTATCGCATCCA
ATCAAATTCTTGTATTTTCTCTCGCAATCAAAACGACACTTTGTCGTTTC
TCATTGTTTTGATAAAATAGCACGTTTCAAACAAAGAGATAAAATTTGTC
ATCTTTAATTGCTCTTGGGAATAACGTAGATGTTATTATTTTTGCCTTTG
ATAACAAAATATTTTTATTGCCTTGGGAATACGAAAAGTCTTCTGCAAAG
GCGAGTATGTTTTTAACCGAGTTTGTTTGCAACTACATAAGCTAATATTA
TACATCTTTTTTAAAGTCAAAATTATACTATTAGCTTAGAACCTTGGCTA
CTTAGAATGAAACTCTATAGGCCTTTTCATAGATTTTGTTTGTGTAACGA
CTGCCTTGCTTTAGAACCATTGCCAAGGTGATTTTAAATCCCTTAAGAAT
TCAACATTTTTTATAAATAAATAAAGTAAACTTCTTACGAGCTACCCTGT
GAATCAGTTACCATATCAACATTTTGAGAACGAGGTAAGCGTTGCTTGTG
ACGTAATTTATAAAAAGGGCTATTACAAAAAAAAAATCTACAATTCGAAA
GAAAGCTTTATGTTCCAGGTAAATCAAATAACAATGGTCAGTAATGAATT
TCTGCAGAGCTTTTCGTGCTTTCATGTTCTAATTGTCAGACTGTTTAAAA
AATCTCTATAATTTCTTAAAGGTTTTGTTTTTAAATAAGAGTGCTTGCTT
TGCTTACTCAACAATTTTAATTCACAAGCTTTTTGATATTGAATTGACAC
AAATGTGGAGCAAGATTGGTCAGAAAAAGAAAAAAAAAAATTTTTTTTTG
CTTATATCAGCATAATATAACAATGGTAAGACATTGTCCTGATATGAAAT
ATGTGTCTGATATGAAACGGAAACACTTATGTAAAAATAAAACCTTTAAC
AATTGTTATTTTAAGACTATCCCGAAGTACATAAAGTGATTTTGTTGAAC
GCCGCAAAGGATGATAACGAGGAACGCAATGAAGATGACGATATTATTGA
TCCTCCAACCGATGGCGACAATGATGAAGATGAAGATGACGACGAAGATG
ATGATGATGAAGATGATCAAATGTCCTATTGTACTAAGGATGGTAAGTAT
TTCAAGCAATACCCTAAGGCTACAATCAACGAGTTAAAAGCTAGTTAGAA
ACTAGGGCTAAAGTTGAAACCTCTAGACGGAGGTATTGCCCATTTGAAAT
GTCTGACCCGCGTGTTTTTGAAACGAACGCCAGATTGAAGGTAAAATCCA
TCGCCAGATTTTGAGAAATATTCCGCGTGAAAACATAAGAGGCACTAGAT
TCAATCTGTCATTCCAAAAGCAGTTTAAGTCTCAAGACTCCGCTTTTCAC
AAGAAAGTTGATAATGCCTCTCCGCCCCTTCGGGCTTTAAAATCAATGAT
TATGCAACACCCCTGTGTGGTCGGCTTTTAAGGGTAGTGATAATGAATTT
AATAATTTAATACATTTTTTTTGGATAGAAAATGGAGGATTCGATTCGAT
TTTGTTCAATAGTAAAATAATTTTAGAGAATAAGAATTACTTAAGCTAGG
TTAACGATATTTAATAGGAGGGCGGAATCGCTATGAAAAATATGCTGATC
TTGCGGAAGCATTTGTAATTGTTAAAATAAATCATCACAAACAAGACAGC
GCGCGTCAATGCCAGTTGATTATTCTATTCGACAATGTGATACACGTTTT
ATTTTTTATTAGAGCCCAGTTTATAAGAACATTGAGGCTGAAATTCGTCG
AGAAATTAAGAACATTGAAGAACATGCCCAGCCTCAGTTTGAAAAAAAAT
GACAAGAAACTATATTTTTTCCTCTTTTCAAGCAGTTTTGACCGAACTTA
GGGATGGATTTTCTAAAACCGAGAGTCAAATATTGTCCAAATTTTACTAA
TTTTAAGTGCTCTTTATTTTGCATGATATTGTCGATTTAGAGTAGTCTTA
AAACTTAAGAACGCATTTAAGAACATTTTAGGCTGAAAACTGCCAAAAAA
ATAAGCACATCCAGGCTCAGCCAAAATTTAGGTGTTCTAATAAAAAAAAC
GTGTGATGCAGACCATTGATTTAGAACGCTTTGACTTGAAAATGTTGAAT
AAAGATTAATGCGGATGGTCTACAGTTTTTATGGTCCAAGTAAATAACCT
ACATTGCATTTGCAAGATCAGCTTGCAAATTTATATATGTATAGTTTAGC
TTTAAAGCCATTGACCTTTTACATACGAAAGCATCCAGCGAGGACCTTTT
TTTAAACATCTGTTCCCCAGGCATAGCCTTCCTGGAAAATTTGATCTGTT
GGCCAAAAGTTTCAAAAATCTTATTCCTAGAAATGAAGATCTGTTTCTCC
TCAAAACCTAAATTTTTAATCTCAAAGTATCTTCCCTGGTGCCTGGAAAA
TTTGGTCTGTTTCCACAATTTTCAGAATTAAAATTTTGATCTGTTCTCCC
AAGCTTATAAAGGAATATGATATCTGTTCCCCTCTCCTGGAAATTTTCAT
CTGTTTCCCTTGCTTTTTGTGATTGATATCTGTTTTCCCCCAGAAAGTTC
AATCTGTTTCCAATGCAATATAATCTTTTTAAAAACAGATATCTGTTTCA
CAATTTATTATGTCATCTCCTAGAAATATTGATCTGTTTCTCTCTGATGA
TGTCATCAGCTGGAGCGGGGAAACAGATAGTTTTAAGGAATAAGGTCTTT
CCTAGAAAATCGGATCTGTTTCCCCTTTTTTCAAAAAAAGCTCTCTCCTG
GAAAAGGGAAACAGATATTTTGGGAAAATGGGCTCGTTGGTTGCTTCTGT
ACATAGTTATAATGTATGTTGATTCAGCAGATTGAAATAAATAGAATCTT
TTGTAATGAATAAAGAAAAATGTGGAGCAAGATTTTTTTCTTGGTTTTAA
TTACAAATTTGAAAGGATTCTTTTATTAAAATTTTGCTGACATCAGTTTC
AGACGAGTCGGGTGTATATAACACCGTATAATTCCTTTAAGGTTAAATGA
ACCACTTTGGAATAAATGCACATGGTTACTCAAAATATTTGGGACATAAT
CAATGATATTTTTTTTCGTTCAAACTTCAGGTTTGGAAAACATCATTTTT
CCATTTTTAATTTGCTTTATCACTGATCATTTTTACTTTCTATTCAATTT
CAGATGATTGTGTGTATGGCAAAACCATTTCAGAATTGCTAAACCAGGTT
GGTAAACCAAACAGAATGTTGGGTTCCAAAGTATACGTTAACGTCACCAT
TCCTGATGGATGTTATTTAGAAACACGCATTGCTCCTACAACGGGGAAGA
AAAAGGCTAATGAAGACGTTTGCGAGATACCAGTACCTTCAATCCGTGGT
GAAATCACCAAGACTATGACAGAGATGTTAAACATTTTCGAAAAGAAGCA
GAGAGATATTAAATTGAAATGTGATGACGATGAAGATGGTAAATAATATT
TTTCTTTTTCCTCAAAATTGATACCTCAACTGGCATAGAACGTTCTTTTA
ACGTTCATCTTTTAAGCTTTATGAACGTTAAAATTATAGGGTCAAAAATT
AATGAAAATTTTAGCTTTGAGAAAACAGAGACCTGTTGTATATTTTTGAA
AAGCTCTCAAAAATTAAGATTAGTGATTTATTGCGAGTATAGGTGATTTC
AGTACCTAACTCGAGCTTCCAAAAGCGCAAAAAGTGGACAAAACAGCTGT
TTCTGGCTGAAAAACACTATTTTAAGGGTTAATATCTCGAGGTACAGTCG
CAGTGCTTTCACTGAAAAAATCGAGCGACCTCACAAAAAAAAACACAAAT
TCCCTCCTATTTGTTGTTACCGCGTTCTGTGCCAGCTTGACCATTAAATT
TCGCCTTGATTGATTTTTACGGAGTGTTTGGCATCTTTTTACGAAATCTA
GTCCCAGTGAAAAAAGTACTAATATTTTTTTTTGCCTAAATACCAGTAAA
AGAAAGAAGTTAGTTGACTGAGCGGGTGATTTGCGAATTATTAGTACAAT
TAAAATCATCATTATTATACCCTTGTTGAAAATTTTGCATTTCAAAAAAT
CTCTTGAAAGGTTTCTAAACCTCAAGGGTCTCAAAAATGAAAATTTCTTG
GTCAAAAGATTTCTTCAGAATATTTTCATGATGATTTTCAAGATGATTTC
TTCATAGGGGGTTTTCTGGGTATGTGTAACCCGGACCTCCAAACCTAAGC
CTCAGACAGATTTGTTGATTAAACCTTTCAAGGGATTAAATGGTATTTCT
TCTCCAATTTTCAAATAAAATTCCAACCTGTTTTAAACTTTTCCCAGTTT
TGACTTGACTTGCTAATGTGAAAAAATCCAACCCTTAGAAACAAAGTTTT
TTGACTTTTTAGTTACCCCTTTGAGAGATTTGGGAAGGTGAAAAAATCGC
CTCTTAAGAACCAGTATCTATTTTTTCTTTAAGTATCCTCTCCGGTATCA
TTCCTTAAATATGTTGTTTTATTTTTCCAAGATGACGATGATGATGACGA
CGACAAGGAGGATAAAACAATAAAAGATGACGGCACAAATAAGTCGGCAC
AACGTAAATCATACCTCATGACGTACGGCTCACCAGAATTCGTCGCATCT
AACCCAAACTTTGATGCACCAAACTTGATGGTTGAAGATGCTTACACCAA
AGCTTATCACAAGTCAACCAACCATCATCCATTTCATCCGAGACGAAAAC
ATCAACAAAATGCACAAATTTAAAACAGATTTGATGCTAGAAATTTAAAC
CGATGGGTATGTCGAAAAATACTCAAACTTTAACCAATGGATGTGTCGCA
AGAAAAACAAAAAAAGTAAAAAAAAACAATGGATTTGTCGTAAAATACTC
AAATTAAAACAATGGATTTGTCGTAAAATACTCAAATTAAAACAATGAAT
TTGTCGTAAAATATTCAATGAATTCGTCGCAAAGTACTCTAAATTAAAAC
AATGAATTTGTCGTAAAATACTCAAATTAAAACAATGAATTTGTCGTAAA
ATACTCAAATTAAAACAATGAATTTGTCGTAAAATACTTATATTCAAAAC
AATGAATTTGTCGTAAAATACTCAAAATCAAACAATGATTTTGTCGTAAA
ATACTCAAATTAAACAATGGATATGTCGTGAAATACTCAAAACAATGGAT
TTGTCGCAAAGTACTCAAATTAAAAGAATGAATTTGTCGTAAAGTACTCA
AAATCAAACAATGAATTTGTCGTAAAATATTCAAAACAATGGATATGTCG
CAAAGTACTCAAATTAAAAGAATCAATTTGTCGTAAAATACTCAAAATCA
AACAATGAATTTGTCGTAAAATATTCAAAACAATGAATTTGTCGTAAAAA
AACTCAAAATCAAACAATGAATTTGCTGCAAAATACTCAAAATTTTATTA
AACTTTGAATTTTGATAATACTCAAATATGAATTTGTCGTAAAATACTCA
AAATTAAAACAATGGATTTGTCGTAAAATACTCAAATTTAAACCATGAAT
TTGTCGCAAAATACTCAAAATTAAAACAATGGATTTGTCATAAAATACCC
AAAATAAAGGAATAGAATGATTTGATTTGTCGCAAAATAATTTGTACTTT
GATAAAGATTCATAAAAGAAAAAAAAACTATTTATTAATTGACGCGACCA
ATTTAATTTTCAGCGATTCACATCTATACTACTTATATTTCAATCAGACC
TTTGACATCTACTGTTTCAAAAAAACATACACTAAAATTAGTAGTTTTTT
GAAACAGTACGAGCCTACGACCTATGAAATTTTCACAGTGCTTATACTGT
AGAGAAATTCATATTTAGCCTGGGTTCCTTGAAAATAACAGATATTAAAT
TGGTCGAGCAATAACAAATATTCATATTTATCTACTATATTTTAGTTTCA
AATTATATTATGAAATATTTATTTTTTGATTGTCGTAATATTTATATTTA
GTCATAAAAAGGATAATTAAGGTATATTTTTATTTGATTATATTGTTGAA
AGACTATATTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001759XLOC_001759Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003188-exon-sc0000025-1575043694:529971..530245TCONS_00003188-exon-sc0000025-1575043694:529971..530245Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:528904..528954TCONS_00003188-exon-sc0000025-1575043694:528904..528954Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:525497..525526TCONS_00003188-exon-sc0000025-1575043694:525497..525526Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:525054..525287TCONS_00003188-exon-sc0000025-1575043694:525054..525287Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:522954..523130TCONS_00003188-exon-sc0000025-1575043694:522954..523130Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:520608..520892TCONS_00003188-exon-sc0000025-1575043694:520608..520892Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1575043694:518032..519564TCONS_00003188-exon-sc0000025-1575043694:518032..519564Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:529971..530245TCONS_00003188-exon-sc0000025-1510915933:529971..530245Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:528904..528954TCONS_00003188-exon-sc0000025-1510915933:528904..528954Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:525497..525526TCONS_00003188-exon-sc0000025-1510915933:525497..525526Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:525054..525287TCONS_00003188-exon-sc0000025-1510915933:525054..525287Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:522954..523130TCONS_00003188-exon-sc0000025-1510915933:522954..523130Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:520608..520892TCONS_00003188-exon-sc0000025-1510915933:520608..520892Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1510915933:518032..519564TCONS_00003188-exon-sc0000025-1510915933:518032..519564Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:529971..530245TCONS_00003188-exon-sc0000025-1491911889:529971..530245Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:528904..528954TCONS_00003188-exon-sc0000025-1491911889:528904..528954Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:525497..525526TCONS_00003188-exon-sc0000025-1491911889:525497..525526Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:525054..525287TCONS_00003188-exon-sc0000025-1491911889:525054..525287Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:522954..523130TCONS_00003188-exon-sc0000025-1491911889:522954..523130Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:520608..520892TCONS_00003188-exon-sc0000025-1491911889:520608..520892Clytia hemisphaericaexon
TCONS_00003188-exon-sc0000025-1491911889:518032..519564TCONS_00003188-exon-sc0000025-1491911889:518032..519564Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:518032..530245 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.46125e-09	1.52185e-09	4.59501e-10	2.25745e-09	9.86123e-09	1.09249e-08	1.68475e-07	0.629022	2.06156e-09	0	1.88493e-07	3.10112e-08	0.31778	4.23123e-10	1.2443e-09	6.3055e-10	49.8904	54.5305	1.25217e-07	4.6856e-08	37.7728	28.4906	2.36275	6.34209	9.22076	4.09798	1.01446e-08	2.52524e-08	8.50272e-09	4.12401e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003188 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top