TCONS_00003145 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00003145
Unique Name	TCONS_00003145
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3439

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000025:100692..112616-
coding sequence from alignment at sc0000025:100692..112616-

transcript sequence

>TCONS_00003145 ID=TCONS_00003145|Name=TCONS_00003145|organism=Clytia hemisphaerica|type=transcript|length=3439bp
CTTCCAGCCATACCCGACTGTCTAAAGATATCAAACTTTTCAGTTCAACA
TGCAACAAGCAGATTCCAAAGAAAAGATTCATGGATAGAAATTGGTTTAA
AGTTTGCAGGGATTTCTAACAGAATTTAATCCTAGTAacaaaaacaaaaa
tggcagaTATTGACAGCATTGTGGCTcaattaaaacaaacaaagaaaggg
AGGTTGAAGTATGATCAACAAAATTGGAATGAGATTTTCGATGAGACCTC
AAAAACACCTGAGTTGCGTATATCGCCCTTCTCTATCAAAACCAATTCAC
GACTGGCTACAATGACCAAAAGTCATTCCATTGGAAACCAGAATAGAAAG
atgTACGATGATAAGATAACACGAAGGACCCCATCATCTTCGTCAAAGAA
AGACAATGAGCCCACTGATCGACCCAAAAACATCAGCAACAAAAGTGTTG
AAAAGCAAGCAgcagaaaacaaaaatgatcGTTTGATAACTCCACCCGTC
AGTCCTGAACATTTACTTCATGATTTTAACAAATCTTATGACCAGGCATT
GAACCAGCTTACGAATCTTCGTTTACAAAACATGAAAGATGCCATCAATA
AGATTAACTTCGAACACCGATGTAATTTGGATGATATTAATCAAAGATCG
GAGGAGCGCGTTCTTTACGGACGATCGCAAGTCGAAACGCACCGTGATTC
ACCGCGAGAATCGAAAGAGATTTCCGAGTTTGTGCAAAAACGGAATCAAC
GAAAACTGGTTGCCGAGCGACAAAAACAACAAGCTGAGATGGAGATCAAA
GCCATCGAAGATCAAAGGAATCGTTTGGAAGAGATGAGAAAGGCTATAGA
GGAGAAAAAGGCCTTGGCTCAACGAATGGGAGATGAAGGAAGGCGACTAG
TTGAGAACGTTGTGAACATAGCAAATAGTAATAAAAATGTTAACGATGGT
TACAAACAGTTGGCCATGCAGATGAGGAACGAGTACGGTGCGTTTTTAAC
GATGATAAACGCAACGAAAAGTGATGATGGTACCCACATTGAGTCCAAGT
ATCGAACTGTGGCTGAGAAATTGCAATTCTTCAGAGATTGTTCTTCTAAA
TgtgatttgattttgaagaaGGTTGAAGAGGAGAAGCAACAAGAGGAAAA
GAGACGTTTGGAAGCGGAGGCTTTGAGAAAGAAAGAAGCTGCTGAGGCAG
AGGCTAAACGAAAAGCGGAAGAAGCTCAAAAACTAAAGGATGCTGCTTCT
AAACCTGCTCCCACTAGTGCACCGCCCCCTGCCTACAACCAGGCTACCAC
CACTGCTAGTCCACCAAGCAGGGCCGTACCCACACCCAGCGTCCAGGAGG
CGGCGCCTGAACTGGTTCCCATATATCCATTCATGGAGAAGGCTTTGAAC
ATGTTCGTAGCTAAAGACGCTTTTGATATTTACCTGATATTGAGAAAATT
GGTGTCAGATACCGAAAGGAAGCATCAACCTATGTCTAAATCTACTGATG
CGACCGTCAAAAAAGAGAAGTTTGACCTTTTCAAAGTGGTCAATACGCAA
ATCAATGCGATTTCGGACGAAAGTCCTAAACATTTGATGGAGAAGATCTT
GAAATTGAACACACTGTTAAAGAATGGTGAAGTTGTTTTCTCTGGAAAAA
AGATATCCACCAAAGGGAATGAAACGGCAATGGCACTAGTTAAAGATTTG
ACTGCCAAGAAACTTGTGATGCAAGGTCAATCGCAAGTTGCGTCTTCTTT
CAAAACTGCATTCCCGATCGCAGCTGTTTGTGCTGGTATATGGACACTAT
TCCCCGATGTCGGCGATCTTCTACTCGGATATTTCTATTTGAAATGTCCA
TACTTAGTACCGTTGCATTTTCCAAAGACTGATAAAATCTCTTCGACAGA
ATATTATCAGATGCTTGGTTATAATGTCGATGATGGAAAAGTTGAAGAGG
ATGATAAATATTTGAATAAACTGTCTGGTTATGTAAGACTGTatgcctcg
attattcaaatgGAGATGCCGCCTGATTTAGCAGGGCGTGGCCACCCTCA
TGGTTTGGAGAACGGGTGGGTTTGGTTTACACGCGTGTTGAATTTAGAAC
CAGTCGAACTAGTGACGGCAActatcatttttgattttttggaagTTGCC
GGACATGCTATGTTGAAAAGGTTCGGAAAGCAATTTGAGAAACTTTTATC
TTTGGTTAAAGATGAGCTTATGCCAAAGATTAACGCCATTACGCCATCTC
ATGCTAAGGCGGGTGCCACTcgattgaaaatgtttttggatAGTTGTATT
AAAGAAGGAAACATCAAACCGCCTGAGGGCGTATTGACTCAAAGATGGTG
GGCAACTGGTagatgagttttttttttaggtattaggataaaattatttc
tttattgcaattttcttattttctactTGTACTTTTTGCCGTTAAATAAG
ATAAAACGACTTAAAGGGGCTACATCAGCCAAAGCTTTCCACTAAACCAC
AGACAATACACTTTCGTAAAAATTGATTGAATGGGCTCTcccagagaaaa
atttaatatgGTGGACGATGCAGTGGAAATTTAGCCCCCGGACATTCATa
attacccctaaacagagCAGTTTTGCCTCCCAAACAAGGcgaattttgta
gatttttcactacccccggacaatgtatccaatatatcctccaccctcca
tgtacaaaaattttctggtaGAGCCCAATATGCGAAACTTCTTTCCAGCc
gaaaaaattcttaatattttaaggCATGGGGGGGGgtggtcggtactaaa
atctcagacatgtTGTTCTGTGACTTGGTGCTATacccaaaaaaattctt
ttagtaCCATGGTTACTTAAGTACAAAGTTGGTTAgacaaaaaattgaga
aatttcttACTACATTGGTACTAAAATTAGtgatttttatcatattttga
tttttttttttgcagaattCTCCTGGAATTCTCcgttatttttcaaacaa
aatttaaaattttctcatttgcAATTATTTTTGCATTCATTCAAATGTCT
TTAATGTTTGCTCAATTTATAAAGAAGAATCGTTTAAGAGTGGTTAAAAG
TATcaatttgtgcaaaaaatgaattttattttgcaaaaatcaaaactttt
gagaaaaatggctTTGAGAAGACAAATTTGTCCAGGGTGGTTGCGTCAAA
GTGTCCCCAAAGATTTTAATACACGTGTGTTAAAATTGGTATAtgcaaaa
tgttctcaaaaacccttttagtacacatATATCTCTGAGATATTGATACC
TCCCTGTAGAACTATAAGGTGCTATCTTCattaatttgaaaacaaatgga
acttttctttctgaaattttttgtaTCACCTAAATACTCGAAGAACATCC
TCATATATTGTAACGAAGTTTTTATTCTAATGATATTGC

Run BLAST on NCBI

protein sequence of TCONS_00003145-protein

>TCONS_00003145-protein ID=TCONS_00003145-protein|Name=TCONS_00003145-protein|organism=Clytia hemisphaerica|type=polypeptide|length=738bp
MADIDSIVAQLKQTKKGRLKYDQQNWNEIFDETSKTPELRISPFSIKTNS
RLATMTKSHSIGNQNRKMYDDKITRRTPSSSSKKDNEPTDRPKNISNKSV
EKQAAENKNDRLITPPVSPEHLLHDFNKSYDQALNQLTNLRLQNMKDAIN
KINFEHRCNLDDINQRSEERVLYGRSQVETHRDSPRESKEISEFVQKRNQ
RKLVAERQKQQAEMEIKAIEDQRNRLEEMRKAIEEKKALAQRMGDEGRRL
VENVVNIANSNKNVNDGYKQLAMQMRNEYGAFLTMINATKSDDGTHIESK
YRTVAEKLQFFRDCSSKCDLILKKVEEEKQQEEKRRLEAEALRKKEAAEA
EAKRKAEEAQKLKDAASKPAPTSAPPPAYNQATTTASPPSRAVPTPSVQE
AAPELVPIYPFMEKALNMFVAKDAFDIYLILRKLVSDTERKHQPMSKSTD
ATVKKEKFDLFKVVNTQINAISDESPKHLMEKILKLNTLLKNGEVVFSGK
KISTKGNETAMALVKDLTAKKLVMQGQSQVASSFKTAFPIAAVCAGIWTL
FPDVGDLLLGYFYLKCPYLVPLHFPKTDKISSTEYYQMLGYNVDDGKVEE
DDKYLNKLSGYVRLYASIIQMEMPPDLAGRGHPHGLENGWVWFTRVLNLE
PVELVTATIIFDFLEVAGHAMLKRFGKQFEKLLSLVKDELMPKINAITPS
HAKAGATRLKMFLDSCIKEGNIKPPEGVLTQRWWATGR

Run BLAST on NCBI

transcript from alignment at sc0000025:100692..112616-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00003145 ID=TCONS_00003145|Name=TCONS_00003145|organism=Clytia hemisphaerica|type=transcript|length=11925bp|location=Sequence derived from alignment at sc0000025:100692..112616- (Clytia hemisphaerica)
CTTCCAGCCATACCCGACTGTCTAAAGATATCAAACTTTTCAGTTCAACA
TGCAACAAGCAGATTCCAAAGAAAAGATTCATGGATAGAAATTGGTTTAA
AGTTTGCAGGGATTTCTAACAGAATTTAATCCTAGTAGTAAGCTTCTTGA
ATTAATTTTTTAACATTTGCTTCAGCTGATAATGGAATGCAATAGGGCTA
CCTAAAACACGTTTAAAAGTTTATAGTCATAAGGGCTACCTAAAACACGT
TTAAAAGTTTATAGTCAGAAGGGCAGTCAGGAGAATCATCTATCGAATCA
TTACCAGGGAATGGTTTTTCCTACAGGCGCTGTGGTATAGTGGTTGTTGA
CCTTGGTTGCTGCCCAGGCAAATCAATAATGATTGATAATGATTGAAGGT
GGTCAGTGACCACATACCAATTTTAACAGTGATTGAGTACTCACTCAACT
CCAGATTATGGCATTTTCTTCGACCATTTTCAATAGGACCCTGCCAACGC
ACCGGACCGACTGTCCGGTGTATTTGTCCGGTGGCAAAAAGTATCCTTTC
GCTACACCGGACGCAATAAGTCCGGTGTCAGTCCGGTGTTGCATACAGGG
AATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGAAACACCGGACGCACCGGACTGGTCATGTCCGGTGTTTTGATT
GTCCGGTGGAAATAAATATCCTTCTCCGACACCGGACATACGACTTCCTT
AAGTCTGGTGTAGAGATTGTCCGGTGGTAAAAAGAATTCTCATTTTACAC
CGGACTTTTTTTACACCGGACTTTCGCGTGTCCGGTGTTCGTTAAGTCCG
GTGCGTCGGCAGGGTCCTTTTTCGATTTGTCAGTTACATCAAAATGCCTC
GAAAATGTGAATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCA
TTATAAAAAGGCCGACACAAACTTTCAATAATTGGATTGTAACATCGAGT
TAAGTCTCTTTTGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGATA
CATTTATCGTTCGTGTCAACTTGACGATTCGTTTAAAACTCCGCCTCTTA
AATATTTGGGGTAGGTAAAAAATGTACAAAGAAATTCATACTTTTCCAAC
CCGGCGAATCTTTAAAAAAGAAGCGAACAATAAAATATAATTACCCTTTC
CAAATAAACCTCTTCGGTGGCGAGCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTACCTTAAGGGGATTAATTTTCGCGGTAACTTATTTT
CGCGAGACAATTTTTTCGCGAAATAATTTAATTTTCGCGGGACTTATTTT
CGCGAAAACGGGAAATCTAAATTTTCGCGGGGTTAAAATTTCGCGAATCA
GCCCCTTTTTGACCGAATTTCTTTCATTTTCCTAGGGTTTCAGGCAAAAA
TCATGATTTTAAATTTTTCGCGAGGATTATATTTTGCGAAATTCGCGAAT
CGAAAGGTTTTTAAAATTTTCGCGAGGATTAATTTTCGCGAATTTCGGAA
AAACTCGCGAAATTCGCGAAATATAATCCCCGCGAAAATTAATCCCCTTA
AGGTAACTGTTTGTTCAATCATTTCAATTACTTTTCGATTATATACCTTC
AATTATATTGAATACCTTCGATTGTATTGAGTACTTTCCAGCCTTCGATT
TTATCAAATATGTTTTCAGTCAGTGCTGTAAGTTGGTCTAATATTGATAA
TATATAACATCCCTCATCTAATAGACCTTTTTTCAAAGAGTCCACCCTGT
TGAATAATTATGTAGTCCAGCAGAAAAACAATGATAAATGCATAATTATT
ACAATATGCATGATACAGTAATTATGCATGGCTCTATCATTGTTTTTATG
GCTGGAGTACATAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTA
TTCCGACGACACCCTTCTTTAGAGAAAGGAATAATATGAAAGCTTGAATC
ACTGATTGAAAAAGGATTATTCCTTTCTAACCACTAAGCAAAGAAAAACA
GTTTCAACCTTTCTATAAATTTCAGCTGATAAAAAGGGTGTCGGAATTAG
AGGAGGGGTGTCGACATTAGACCAANTTACATGATAAGAATACAAATAGA
CGACGTATATTACAATTATTATGTATATTACATGACACCTTGCTCCTATT
CTAGTAAAGATAATATATGTCGTCAAAGAGTACACTTAAATGAAGAGCTA
ACCGATTGCGGGCCTTCTGTAAATTAACATCCGGACTTATGGGTGGTAAA
GAGGGTGTTGATAGTTGCCGCCTCATTGATTTGATGTTTGTTATTCAAAT
TAAGTGCTACCACATATTAAGTGCTACCACATCCGCCCTTTTTTCAACTT
TGCGCCACTTTTACAATTTAGTCTGTTTGTTTCTTGATGGAAACCAGTCC
AAGTTGTTTCGTATTTTTCCCGCACAAGTCACTTTTATTACAAAACTGTT
NCAAAGATACAAACTAAAATAAAAACAAACCTTTCGCTCTGTGACGCAAC
GAAGATACCAAAGTGTCAACTAAACTGAGAGATTTGATACACTGAACCAA
TTGAACCAAATAACAATAATTGCTTCTTATAACAAAACGTATTTTTTTAT
TGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGCAATAGTAGTTTATCGTTTAACTT
GGAGAGGGAATGTTTGTAAACATAGAATTTTTTTTCATAACAGTTATTTG
GGGGGTCGGAATTAGGCAGTGGTGTCAGCTTTAGGTCCTCTCACGGTAAC
TGCTATGAAAAAAATTCTATGTGTACAAACATTCCCTCTCCAAGTTGAAC
AATAAACTATATTGCAAGAACTCTCGAAACAAAACATCTAACAAGATGAC
TAAAATGTCAAGATGTCAATTAATGTGATAAAAAAAGTGCGAGTTGTAAA
AATAATCACCTTTCACCTAATCAATTTTGTAATAAAAAATTATGTTTTGT
ATAAGGAGCAATTAATGTTTTGGTTCAATTGGTTCAGTGTATCAAATCTC
TCAGTTTAGTTGACACTTTGGTATATATCTTCCATTGTGTCACAGCAAAA
AGTTTGTTTCTATTTTAGTTTGTATCTTTGAAAGACCCCATCAGATTTAG
GTAGGGCTGTCGGATTTAGGACCACTCTCAGTTTCGTTTTCTCTGACCAA
TCAAAAAACGCAATATGAGTTACTTGAGGAAACCCAGATCGAAGGCACAC
AAAATGGCGGGGAAAATGGCTGGGAAATAAGGGGGTCAATCTTAATGGCG
GGGCTTCTTTTTGTGCTTTGGTTTTAGGTCAGTTTTTTTTGTTTTTTCTT
AAAGATATATCATATTAATTGGTAATTGGAGTTGTCAAAGTTATCGAAAG
TAATCTATCAGGCTAGCTCTAATGTCTAAAGCTCTAAAACAGCATCTAAT
AACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAACTATAAAGT
GCACTTACAAGCATCAGTATCAGATCTAACAAAATTAATAACGACACTGT
CATCATTGACAATAAACTTTTCTGTCAAGAGCCTTGTAAACATTCCAACA
ACTTCTATCAAAATAATCTTTCACAGCTAAATCTACCATTTTTACCGCAG
TCCAAGGATTGAGTCGAGAACGCTTGCAGAACACCCCCAAGCTCCTGCGT
GGGTGAAAAACTTTAATCCGTCAATCATTCTCTCAAGCAAAGAGTAAGCA
AAGCGATTCTAGCTTAACAATAGTGCCGCGGATCATCAGTGGATAGTATT
CAATCATCATTGTACCTTTATTTTCATTCCTAGAACTCTTGCAAAAAAAA
AGGAAAAGTAGAAAAGTTGTATTTTTTTATCCTCTACTCACATACTGAAT
TTGAAAGATCTTCTATCTATGTGGCGTTTTTTTGCAAACTTTAAAAAACA
GATTTTTGTCCCGCTTTTGCGGGACTTTAGCTTTAGTGCATGCGTGCAGC
ATAGGGTACAAAGTCCAAATATGCGTTTTCTCCCGTAATTTTTGTATATA
TATGAAGAGTTAGGTCTATACTGTCAATAAAAATCAAAGTACTCGAACTG
TTATCGAGTCTTTGAAGGGTTGTTAAGAAAGTGATTGAATACTCACAATT
TTTTTGAAATTTTAGTACTCAACATTCGATTGTTAATCAATAATTGAATT
AGAAAATTTGCCTTATTTGATTCAAACCTTGCATTTTTCTAGCAAGTCAA
TTGTGTGCGCACATATGTGAGTTATGAGTATATGTCATATAGTATATATT
ATATGAGTTATGTCTGCAACTTTTTGAATTTTCTCCCCAGACAAATTTAC
TTTGGGAAATCTACTTTCAGATTTTGCTTTCCCTATCCCCTAGCTCTGCC
TAGCTCTAAGAAAATTTTTAAAATCGACCTTGAACAACCTTGCTTAAGAT
AAATTATTTGATTAGAATCTCCTTTTTCCGTTCACATTTTGCAAGAAAAA
GAGGTCTTCAAAAAATATGCACTTTGTTAAGTGGAAAAAGTGACTTTATT
AAGCTAGGCACTATCAAGATTTAAAAAAATCATAACTTTTACAAATATTG
CACGTCCCTAGATTTTTCACTGGGGCCTCAAAGTTAGAATATACTAAAGC
AATGGGTGGTGATAGCAGATTGCGCTCTTATTACAAAATGTGTCAGTTTT
TATTACAAAGTACGTTAGGTGTTAAAAGTGCGCCAGGGTGTATTTATAAA
GTGTGACAGGTATTACACAGTGCGTTAGTACAACCTGGGTAAATTCTCTT
ACAGAGCCATAGCCTTTAGAGTGAATGTATGTCATGTGCAGAGTATTGGA
ATCTGACTGGAGATTGAATATAGATACTTATACTTGGTATTGATACGATT
GGTACATGCTGAAGTTTTTTAACACAACATATTGTCATTTTTTTCCAAAA
AGCTCAAAAAGGTGGGGGCTAAAGGTGTTTCAAATGTTTAGAGTGGACCT
AAAAATGTACGTGGGAGGAAGCTGAACTCTCATCATTTAACGTGGGAGCT
GAATACTTCATCTTATAATGTTGGCTTCAATTACTCAAACTGACTCAAAT
CAAAGCTTGTGAGGCTGAAATTTTTTTATATATTTTTATATAAAATGAGC
AAAATATTTTATCTTAACCTTCGAACTCCAACACAATTTACATTGAATAA
CCCTTTTTTTTGTGGAACAAACTTTCAAAAGTCTCCGGGGTCGAAAGCCC
TGGGGGCTATTAAAATTTCTATTTAAAAATTACCATCTATTACCATTTTA
AATGTTATTTGATAATTTGATAAAATGTTAACCACATCTCCTCTGCTCTT
TCAACAGACAAAAACAAAAATGGCAGATATTGACAGCATTGTGGCTCAAT
TAAAACAAACAAAGAAAGGGAGGTTGAAGTATGATCAACAAAATTGGAAT
GAGATTTTCGATGAGACCTCAAAAACACCTGAGTTGCGTATATCGCCCTT
CTCTATCAAAACCAATTCACGACTGGCTACAATGACCAAAAGTCATTCCA
TTGGAAACCAGAATAGAAAGGTATCATGTTCACTCTACTGTATTTTTATA
AAGACATTGGGATTTCTGGTCGGTTTGTCATGGTTAATGCAAGAAGAGCC
CTTTCAAGTTTTAATGAACGATATTCAACAGCTAAAATATTCAGTTGCAA
TAAACAGTTGAAATTTTCCAAATTTCTCCACAAATTAAAAAAAAATTATA
TTAGGACTTCCTTGACACTATTATATACGCTTTCACAGAAGAACATGTTA
GCGGAGCGAGCGAGAAAAGATTTTGAATCTTTACAACGATTGATGTTATT
GCGATTTTTGGTTCTTCAAATGTCAATCTTCTTTCTGCCCCCTTTTTTTT
TTTTATTCATAGAATTATATTTCACAGGTCTATCGACCTCTACGAAATAA
TTTTAGATTTATAAATTGTCTAATTCTTCATCTGTCGTCCANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCTTTTGATTTTTTTTAGATGTACGATGATAAGATAACACGAAGGACC
CCATCATCTTCGTCAAAGAAAGACAATGAGCCCACTGATCGACCCAAAAA
CATCAGCAACAAAAGTGTTGAAAAGCAAGCAGCAGAAAACAAAAATGATC
GTTTGATAACTCCACCCGTCAGTCCTGAACATTTACTTCATGATTTTAAC
AAATCTTATGACCAGGCATTGAACCAGCTTACGAATCTTCGTTTACAAAA
CATGAAAGATGCCATCAATAAGATTAACTTCGAACACCGATGTAATTTGG
ATGATATTAATCAAAGATCGGAGGAGCGCGTTCTTTACGGACGATCGCAA
GTCGAAACGCACCGTGATTCACCGCGAGAATCGAAAGAGATTTCCGAGTT
TGTGCAAAAACGGAATCAACGAAAACTGGTTGCCGAGCGACAAAAACAAC
AAGCTGAGATGGAGATCAAAGCCATCGAAGATCAAAGGAATCGTTTGGAA
GAGATGAGAAAGGCTATAGAGGAGAAAAAGGCCTTGGCTCAACGAATGGG
AGATGAAGGAAGGCGACTAGTTGAGAACGTTGTGAACATAGCAAATAGTA
ATAAAAATGTTAACGATGGTTACAAACAGTTGGCCATGCAGATGAGGAAC
GAGTACGGTGCGTTTTTAACGATGATAAACGCAACGAAAAGTGATGATGG
TACCCACATTGAGTCCAAGTATCGAACTGTGGCTGAGAAATTGCAATTCT
TCAGAGATTGTTCTTCTAAATGTGATTTGATTTTGAAGAAGGTTGAAGAG
GAGAAGCAACAAGAGGAAAAGAGACGTTTGGAAGCGGAGGCTTTGAGAAA
GAAAGAAGCTGCTGAGGCAGAGGCTAAACGAAAAGCGGAAGAAGCTCAAA
AACTAAAGGATGCTGCTTCTAAACCTGCTCCCACTAGTGCACCGCCCCCT
GCCTACAACCAGGCTACCACCACTGCTAGTCCACCAAGCAGGGCCGTACC
CACACCCAGCGTCCAGGAGGCGGCGCCTGAACTGGTTCCCATATATCCAT
TCATGGAGAAGGCTTTGAACATGTTCGTAGCTAAAGACGCTTTTGATATT
TACCTGATATTGAGAAAATTGGTGTCAGATACCGAAAGGAAGCATCAACC
TATGTCTAAATCTACTGATGCGACCGTCAAAAAAGAGAAGTTTGACCTTT
TCAAAGTGGTCAATACGCAAATCAATGCGATTTCGGACGAAAGTCCTAAA
CATTTGATGGAGAAGATCTTGAAATTGAACACACTGTTAAAGAATGGTGA
AGTTGTTTTCTCTGGAAAAAAGATATCCACCAAAGGGAATGAAACGGCAA
TGGTGAGTGTTTTTGTCTTTGACTTCTCACTTGTCCTTGTAATTCTTCCT
ATACTTTTAGGAATTGTCTGGTACTGAAGAGTCACTATGTGTGTCATTCA
ATCAGTTTGAATTTATTTAGCCTAAAGAGGAAATTTGAATTACCTCTGCC
TCATTTTTGTGAGCATTGCTTAAGTCTGTCTCAATATAATTTGCAGAGGA
GACAAAAAAGGCTATAACTGTTAAAAAGAATTCGAAGTAGATAACGGTTT
TGTGCTCGTTAAAAAGATAATCCGGAGTGAAATATTATCAAAAAAGAAAA
AAAAAAGAAAAATGGAAAGACGAAGATGAAAAATGAAGAAGAAGAAAGAA
GAAGAAGAAAATCAACTTCTTGTAGAATAATGATATGATCTTCATTTTCG
TATCAGAAATTCTTTGATCTTAGAACGTCATAAATGCGTGATAAACTTTG
GACTATATCTTTCGATGGAATAAGTTTCTTTGAATTTTTTTTTCATATTA
ATGATGTTCTAAAATTAAAGAATCACTCGTGTGAAAATGATAATTATTGA
AGAAGTTGATCTTCTTCTTCATTTCCAATTTTCATTTTCAATCTTCGTTT
CCCAATCAGTTATTTTTTTATGATAATATTCAACTTCTGTTTGTCTTTTC
AACAAACACAAAACCGCAATCTAATTCGAACTATATCAAAAGTTACAGCC
TTTTTTTGTCTCCGCTGCAAATTATTTTGAGACATACTTTATTGATTCGT
GCGAACCTAAAAAGTCCCTGTCTTAGTATTCCCTTTCTTTCCTGAGGAGT
ATTTTTAATACCCCAAATTACTTACTGTACTTTTGAAGGCCTAATGTGTC
TATGATGATACAATTTGAGAAATCGGATGATTGATTCTCTTGAATACAAA
CACGTGTCTCAGACAAAATTTGAAACAGATAATGAAAAGTAAAATTCTCA
TAATTTGAGTCGCTTACTTTAATATACTGTTGTAAATAAAAAGTCGACGA
TTTTATTTTTCTCTACAGGCACTAGTTAAAGATTTGACTGCCAAGAAACT
TGTGATGCAAGGTCAATCGCAAGTTGCGTCTTCTTTCAAAACTGCATTCC
CGATCGCAGCTGTTTGTGCTGGTATATGGACACTATTCCCCGATGTCGGC
GATCTTCTACTCGGATATTTCTATTTGAAATGTCCATACTTAGTACCGTT
GCATTTTCCAAAGACTGATAAAATCTCTTCGACAGAATATTATCAGATGC
TTGGTTATAATGTCGATGATGGAAAAGTTGAAGAGGATGATAAATATTTG
AATAAACTGTCTGGTTATGTAAGACTGTATGCCTCGATTATTCAAATGGA
GATGCCGCCTGATTTAGCAGGGCGTGGCCACCCTCATGGTTTGGAGAACG
GGTGGGTTTGGTTTACACGCGTGTTGAATTTAGAACCAGTCGAACTAGTG
ACGGCAACTATCATTTTTGATTTTTTGGAAGTTGCCGGACATGCTATGTT
GAAAAGGTTCGGAAAGCAATTTGAGAAACTTTTATCTTTGGTTAAAGATG
AGCTTATGCCAAAGATTAACGCCATTACGCCATCTCATGCTAAGGCGGGT
GCCACTCGATTGAAAATGTTTTTGGATAGTTGTATTAAAGAAGGAAACAT
CAAACCGCCTGAGGGCGTATTGACTCAAAGATGGTGGGCAACTGGTAGAT
GAGTTTTTTTTTTAGGTATTAGGATAAAATTATTTCTTTATTGCAATTTT
CTTATTTTCTACTTGTACTTTTTGCCGTTAAATAAGATAAAACGACTTAA
AGGGGCTACATCAGCCAAAGCTTTCCACTAAACCACAGACAATACACTTT
CGTAAAAATTGATTGAATGGGCTCTCCCAGAGAAAAATTTAATATGGTGG
ACGATGCAGTGGAAATTTAGCCCCCGGACATTCATAATTACCCCTAAACA
GAGCAGTTTTGCCTCCCAAACAAGGCGAATTTTGTAGATTTTTCACTACC
CCCGGACAATGTATCCAATATATCCTCCACCCTCCATGTACAAAAATTTT
CTGGTAGAGCCCAATATGCGAAACTTCTTTCCAGCCGAAAAAATTCTTAA
TATTTTAAGGCATGGGGGGGGGTGGTCGGTACTAAAATCTCAGACATGTT
GTTCTGTGACTTGGTGCTATACCCAAAAAAATTCTTTTAGTACCATGGTT
ACTTAAGTACAAAGTTGGTTAGACAAAAAATTGAGAAATTTCTTACTACA
TTGGTACTAAAATTAGTGATTTTTATCATATTTTGATTTTTTTTTTTGCA
GAATTCTCCTGGAATTCTCCGTTATTTTTCAAACAAAATTTAAAATTTTC
TCATTTGCAATTATTTTTGCATTCATTCAAATGTCTTTAATGTTTGCTCA
ATTTATAAAGAAGAATCGTTTAAGAGTGGTTAAAAGTATCAATTTGTGCA
AAAAATGAATTTTATTTTGCAAAAATCAAAACTTTTGAGAAAAATGGCTT
TGAGAAGACAAATTTGTCCAGGGTGGTTGCGTCAAAGTGTCCCCAAAGAT
TTTAATACACGTGTGTTAAAATTGGTATATGCAAAATGTTCTCAAAAACC
CTTTTAGTACACATATATCTCTGAGATATTGATACCTCCCTGTAGAACTA
TAAGGTGCTATCTTCATTAATTTGAAAACAAATGGAACTTTTCTTTCTGA
AATTTTTTGTATCACCTAAATACTCGAAGAACATCCTCATATATTGTAAC
GAAGTTTTTATTCTAATGATATTGC

Coding sequence (CDS) from alignment at sc0000025:100692..112616-

>TCONS_00003145 ID=TCONS_00003145|Name=TCONS_00003145|organism=Clytia hemisphaerica|type=CDS|length=6651bp|location=Sequence derived from alignment at sc0000025:100692..112616- (Clytia hemisphaerica)
GCACTAGTTAAAGATTTGACTGCCAAGAAACTTGTGATGCAAGGTCAATC
GCAAGTTGCGTCTTCTTTCAAAACTGCATTCCCGATCGCAGCTGTTTGTG
CTGGTATATGGACACTATTCCCCGATGTCGGCGATCTTCTACTCGGATAT
TTCTATTTGAAATGTCCATACTTAGTACCGTTGCATTTTCCAAAGACTGA
TAAAATCTCTTCGACAGAATATTATCAGATGCTTGGTTATAATGTCGATG
ATGGAAAAGTTGAAGAGGATGATAAATATTTGAATAAACTGTCTGGTTAT
GTAAGACTGTATGCCTCGATTATTCAAATGGAGATGCCGCCTGATTTAGC
AGGGCGTGGCCACCCTCATGGTTTGGAGAACGGGTGGGTTTGGTTTACAC
GCGTGTTGAATTTAGAACCAGTCGAACTAGTGACGGCAACTATCATTTTT
GATTTTTTGGAAGTTGCCGGACATGCTATGTTGAAAAGGTTCGGAAAGCA
ATTTGAGAAACTTTTATCTTTGGTTAAAGATGAGCTTATGCCAAAGATTA
ACGCCATTACGCCATCTCATGCTAAGGCGGGTGCCACTCGATTGAAAATG
TTTTTGGATAGTTGTATTAAAGAAGGAAACATCAAACCGCCTGAGGGCGT
ATTGACTCAAAGATGGTGGGCAACTGGTAGATGAATGTACGATGATAAGA
TAACACGAAGGACCCCATCATCTTCGTCAAAGAAAGACAATGAGCCCACT
GATCGACCCAAAAACATCAGCAACAAAAGTGTTGAAAAGCAAGCAGCAGA
AAACAAAAATGATCGTTTGATAACTCCACCCGTCAGTCCTGAACATTTAC
TTCATGATTTTAACAAATCTTATGACCAGGCATTGAACCAGCTTACGAAT
CTTCGTTTACAAAACATGAAAGATGCCATCAATAAGATTAACTTCGAACA
CCGATGTAATTTGGATGATATTAATCAAAGATCGGAGGAGCGCGTTCTTT
ACGGACGATCGCAAGTCGAAACGCACCGTGATTCACCGCGAGAATCGAAA
GAGATTTCCGAGTTTGTGCAAAAACGGAATCAACGAAAACTGGTTGCCGA
GCGACAAAAACAACAAGCTGAGATGGAGATCAAAGCCATCGAAGATCAAA
GGAATCGTTTGGAAGAGATGAGAAAGGCTATAGAGGAGAAAAAGGCCTTG
GCTCAACGAATGGGAGATGAAGGAAGGCGACTAGTTGAGAACGTTGTGAA
CATAGCAAATAGTAATAAAAATGTTAACGATGGTTACAAACAGTTGGCCA
TGCAGATGAGGAACGAGTACGGTGCGTTTTTAACGATGATAAACGCAACG
AAAAGTGATGATGGTACCCACATTGAGTCCAAGTATCGAACTGTGGCTGA
GAAATTGCAATTCTTCAGAGATTGTTCTTCTAAATGTGATTTGATTTTGA
AGAAGGTTGAAGAGGAGAAGCAACAAGAGGAAAAGAGACGTTTGGAAGCG
GAGGCTTTGAGAAAGAAAGAAGCTGCTGAGGCAGAGGCTAAACGAAAAGC
GGAAGAAGCTCAAAAACTAAAGGATGCTGCTTCTAAACCTGCTCCCACTA
GTGCACCGCCCCCTGCCTACAACCAGGCTACCACCACTGCTAGTCCACCA
AGCAGGGCCGTACCCACACCCAGCGTCCAGGAGGCGGCGCCTGAACTGGT
TCCCATATATCCATTCATGGAGAAGGCTTTGAACATGTTCGTAGCTAAAG
ACGCTTTTGATATTTACCTGATATTGAGAAAATTGGTGTCAGATACCGAA
AGGAAGCATCAACCTATGTCTAAATCTACTGATGCGACCGTCAAAAAAGA
GAAGTTTGACCTTTTCAAAGTGGTCAATACGCAAATCAATGCGATTTCGG
ACGAAAGTCCTAAACATTTGATGGAGAAGATCTTGAAATTGAACACACTG
TTAAAGAATGGTGAAGTTGTTTTCTCTGGAAAAAAGATATCCACCAAAGG
GAATGAAACGGCAATGATGGCAGATATTGACAGCATTGTGGCTCAATTAA
AACAAACAAAGAAAGGGAGGTTGAAGTATGATCAACAAAATTGGAATGAG
ATTTTCGATGAGACCTCAAAAACACCTGAGTTGCGTATATCGCCCTTCTC
TATCAAAACCAATTCACGACTGGCTACAATGACCAAAAGTCATTCCATTG
GAAACCAGAATAGAAAGGCACTAGTTAAAGATTTGACTGCCAAGAAACTT
GTGATGCAAGGTCAATCGCAAGTTGCGTCTTCTTTCAAAACTGCATTCCC
GATCGCAGCTGTTTGTGCTGGTATATGGACACTATTCCCCGATGTCGGCG
ATCTTCTACTCGGATATTTCTATTTGAAATGTCCATACTTAGTACCGTTG
CATTTTCCAAAGACTGATAAAATCTCTTCGACAGAATATTATCAGATGCT
TGGTTATAATGTCGATGATGGAAAAGTTGAAGAGGATGATAAATATTTGA
ATAAACTGTCTGGTTATGTAAGACTGTATGCCTCGATTATTCAAATGGAG
ATGCCGCCTGATTTAGCAGGGCGTGGCCACCCTCATGGTTTGGAGAACGG
GTGGGTTTGGTTTACACGCGTGTTGAATTTAGAACCAGTCGAACTAGTGA
CGGCAACTATCATTTTTGATTTTTTGGAAGTTGCCGGACATGCTATGTTG
AAAAGGTTCGGAAAGCAATTTGAGAAACTTTTATCTTTGGTTAAAGATGA
GCTTATGCCAAAGATTAACGCCATTACGCCATCTCATGCTAAGGCGGGTG
CCACTCGATTGAAAATGTTTTTGGATAGTTGTATTAAAGAAGGAAACATC
AAACCGCCTGAGGGCGTATTGACTCAAAGATGGTGGGCAACTGGTAGATG
AATGTACGATGATAAGATAACACGAAGGACCCCATCATCTTCGTCAAAGA
AAGACAATGAGCCCACTGATCGACCCAAAAACATCAGCAACAAAAGTGTT
GAAAAGCAAGCAGCAGAAAACAAAAATGATCGTTTGATAACTCCACCCGT
CAGTCCTGAACATTTACTTCATGATTTTAACAAATCTTATGACCAGGCAT
TGAACCAGCTTACGAATCTTCGTTTACAAAACATGAAAGATGCCATCAAT
AAGATTAACTTCGAACACCGATGTAATTTGGATGATATTAATCAAAGATC
GGAGGAGCGCGTTCTTTACGGACGATCGCAAGTCGAAACGCACCGTGATT
CACCGCGAGAATCGAAAGAGATTTCCGAGTTTGTGCAAAAACGGAATCAA
CGAAAACTGGTTGCCGAGCGACAAAAACAACAAGCTGAGATGGAGATCAA
AGCCATCGAAGATCAAAGGAATCGTTTGGAAGAGATGAGAAAGGCTATAG
AGGAGAAAAAGGCCTTGGCTCAACGAATGGGAGATGAAGGAAGGCGACTA
GTTGAGAACGTTGTGAACATAGCAAATAGTAATAAAAATGTTAACGATGG
TTACAAACAGTTGGCCATGCAGATGAGGAACGAGTACGGTGCGTTTTTAA
CGATGATAAACGCAACGAAAAGTGATGATGGTACCCACATTGAGTCCAAG
TATCGAACTGTGGCTGAGAAATTGCAATTCTTCAGAGATTGTTCTTCTAA
ATGTGATTTGATTTTGAAGAAGGTTGAAGAGGAGAAGCAACAAGAGGAAA
AGAGACGTTTGGAAGCGGAGGCTTTGAGAAAGAAAGAAGCTGCTGAGGCA
GAGGCTAAACGAAAAGCGGAAGAAGCTCAAAAACTAAAGGATGCTGCTTC
TAAACCTGCTCCCACTAGTGCACCGCCCCCTGCCTACAACCAGGCTACCA
CCACTGCTAGTCCACCAAGCAGGGCCGTACCCACACCCAGCGTCCAGGAG
GCGGCGCCTGAACTGGTTCCCATATATCCATTCATGGAGAAGGCTTTGAA
CATGTTCGTAGCTAAAGACGCTTTTGATATTTACCTGATATTGAGAAAAT
TGGTGTCAGATACCGAAAGGAAGCATCAACCTATGTCTAAATCTACTGAT
GCGACCGTCAAAAAAGAGAAGTTTGACCTTTTCAAAGTGGTCAATACGCA
AATCAATGCGATTTCGGACGAAAGTCCTAAACATTTGATGGAGAAGATCT
TGAAATTGAACACACTGTTAAAGAATGGTGAAGTTGTTTTCTCTGGAAAA
AAGATATCCACCAAAGGGAATGAAACGGCAATGATGGCAGATATTGACAG
CATTGTGGCTCAATTAAAACAAACAAAGAAAGGGAGGTTGAAGTATGATC
AACAAAATTGGAATGAGATTTTCGATGAGACCTCAAAAACACCTGAGTTG
CGTATATCGCCCTTCTCTATCAAAACCAATTCACGACTGGCTACAATGAC
CAAAAGTCATTCCATTGGAAACCAGAATAGAAAGGCACTAGTTAAAGATT
TGACTGCCAAGAAACTTGTGATGCAAGGTCAATCGCAAGTTGCGTCTTCT
TTCAAAACTGCATTCCCGATCGCAGCTGTTTGTGCTGGTATATGGACACT
ATTCCCCGATGTCGGCGATCTTCTACTCGGATATTTCTATTTGAAATGTC
CATACTTAGTACCGTTGCATTTTCCAAAGACTGATAAAATCTCTTCGACA
GAATATTATCAGATGCTTGGTTATAATGTCGATGATGGAAAAGTTGAAGA
GGATGATAAATATTTGAATAAACTGTCTGGTTATGTAAGACTGTATGCCT
CGATTATTCAAATGGAGATGCCGCCTGATTTAGCAGGGCGTGGCCACCCT
CATGGTTTGGAGAACGGGTGGGTTTGGTTTACACGCGTGTTGAATTTAGA
ACCAGTCGAACTAGTGACGGCAACTATCATTTTTGATTTTTTGGAAGTTG
CCGGACATGCTATGTTGAAAAGGTTCGGAAAGCAATTTGAGAAACTTTTA
TCTTTGGTTAAAGATGAGCTTATGCCAAAGATTAACGCCATTACGCCATC
TCATGCTAAGGCGGGTGCCACTCGATTGAAAATGTTTTTGGATAGTTGTA
TTAAAGAAGGAAACATCAAACCGCCTGAGGGCGTATTGACTCAAAGATGG
TGGGCAACTGGTAGATGAATGTACGATGATAAGATAACACGAAGGACCCC
ATCATCTTCGTCAAAGAAAGACAATGAGCCCACTGATCGACCCAAAAACA
TCAGCAACAAAAGTGTTGAAAAGCAAGCAGCAGAAAACAAAAATGATCGT
TTGATAACTCCACCCGTCAGTCCTGAACATTTACTTCATGATTTTAACAA
ATCTTATGACCAGGCATTGAACCAGCTTACGAATCTTCGTTTACAAAACA
TGAAAGATGCCATCAATAAGATTAACTTCGAACACCGATGTAATTTGGAT
GATATTAATCAAAGATCGGAGGAGCGCGTTCTTTACGGACGATCGCAAGT
CGAAACGCACCGTGATTCACCGCGAGAATCGAAAGAGATTTCCGAGTTTG
TGCAAAAACGGAATCAACGAAAACTGGTTGCCGAGCGACAAAAACAACAA
GCTGAGATGGAGATCAAAGCCATCGAAGATCAAAGGAATCGTTTGGAAGA
GATGAGAAAGGCTATAGAGGAGAAAAAGGCCTTGGCTCAACGAATGGGAG
ATGAAGGAAGGCGACTAGTTGAGAACGTTGTGAACATAGCAAATAGTAAT
AAAAATGTTAACGATGGTTACAAACAGTTGGCCATGCAGATGAGGAACGA
GTACGGTGCGTTTTTAACGATGATAAACGCAACGAAAAGTGATGATGGTA
CCCACATTGAGTCCAAGTATCGAACTGTGGCTGAGAAATTGCAATTCTTC
AGAGATTGTTCTTCTAAATGTGATTTGATTTTGAAGAAGGTTGAAGAGGA
GAAGCAACAAGAGGAAAAGAGACGTTTGGAAGCGGAGGCTTTGAGAAAGA
AAGAAGCTGCTGAGGCAGAGGCTAAACGAAAAGCGGAAGAAGCTCAAAAA
CTAAAGGATGCTGCTTCTAAACCTGCTCCCACTAGTGCACCGCCCCCTGC
CTACAACCAGGCTACCACCACTGCTAGTCCACCAAGCAGGGCCGTACCCA
CACCCAGCGTCCAGGAGGCGGCGCCTGAACTGGTTCCCATATATCCATTC
ATGGAGAAGGCTTTGAACATGTTCGTAGCTAAAGACGCTTTTGATATTTA
CCTGATATTGAGAAAATTGGTGTCAGATACCGAAAGGAAGCATCAACCTA
TGTCTAAATCTACTGATGCGACCGTCAAAAAAGAGAAGTTTGACCTTTTC
AAAGTGGTCAATACGCAAATCAATGCGATTTCGGACGAAAGTCCTAAACA
TTTGATGGAGAAGATCTTGAAATTGAACACACTGTTAAAGAATGGTGAAG
TTGTTTTCTCTGGAAAAAAGATATCCACCAAAGGGAATGAAACGGCAATG
ATGGCAGATATTGACAGCATTGTGGCTCAATTAAAACAAACAAAGAAAGG
GAGGTTGAAGTATGATCAACAAAATTGGAATGAGATTTTCGATGAGACCT
CAAAAACACCTGAGTTGCGTATATCGCCCTTCTCTATCAAAACCAATTCA
CGACTGGCTACAATGACCAAAAGTCATTCCATTGGAAACCAGAATAGAAA
G

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001742	XLOC_001742	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00003145-protein	TCONS_00003145-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00003145-exon-sc0000025-1575043694:112480..112616	TCONS_00003145-exon-sc0000025-1575043694:112480..112616	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1575043694:106297..106509	TCONS_00003145-exon-sc0000025-1575043694:106297..106509	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1575043694:103465..104796	TCONS_00003145-exon-sc0000025-1575043694:103465..104796	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1575043694:100692..102448	TCONS_00003145-exon-sc0000025-1575043694:100692..102448	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1510915933:112480..112616	TCONS_00003145-exon-sc0000025-1510915933:112480..112616	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1510915933:106297..106509	TCONS_00003145-exon-sc0000025-1510915933:106297..106509	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1510915933:103465..104796	TCONS_00003145-exon-sc0000025-1510915933:103465..104796	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1510915933:100692..102448	TCONS_00003145-exon-sc0000025-1510915933:100692..102448	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1491911889:112480..112616	TCONS_00003145-exon-sc0000025-1491911889:112480..112616	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1491911889:106297..106509	TCONS_00003145-exon-sc0000025-1491911889:106297..106509	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1491911889:103465..104796	TCONS_00003145-exon-sc0000025-1491911889:103465..104796	Clytia hemisphaerica	exon
TCONS_00003145-exon-sc0000025-1491911889:100692..102448	TCONS_00003145-exon-sc0000025-1491911889:100692..102448	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000025	supercontig	sc0000025:100692..112616 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.3898	11.5535	4.10403	3.13156	16.4832	13.1302	11.3732	12.4635	6.01631	8.17445	6.32075	4.1989	5.21389	5.67179	5.58833	7.11722	7.34397	6.79774	4.14826	4.19082	6.03466	5.59306	17.2536	14.4863	9.77627	10.1459	4.75133	3.67935	12.5523	15.247

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR012476	GLE1

Vocabulary: **Cellular Component**
Term	Definition
GO:0005643	nuclear pore

Vocabulary: **Biological Process**
Term	Definition
GO:0016973	poly(A)+ mRNA export from nucleus

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005643	nuclear pore

Blast

[Close]

BLAST of TCONS_00003145 vs. Swiss-Prot (Human)
Match: GLE1 (Nucleoporin GLE1 OS=Homo sapiens GN=GLE1 PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 2.731e-69
Identity = 121/292 (41.44%), Postives = 179/292 (61.30%), Query Frame = 3

Query: 1482 MSKSTDATVKKEKFDLFKVVNTQINAISDESPKHLMEKILKLNTLLKNGEVVFSGKKISTKGNETAMALVKDLTAKKLVMQGQSQVASSFKTAFPIAAVCAGIWTLFPDVGDLLLGYFYLKCPYLVPLHFPKTDKISSTEYYQMLGYNVDDGKVEEDDKYLNKLSGYVRLYASIIQMEMPPDLAGRGHPHGLENGWVWFTRVLNLEPVELVTATIIFDFLEVAGHAMLKRFGKQFEKLLSLVKDELMPKINAITPSHAKAGATRLKMFLDSCIKEGNIKPPEGVLTQRWWAT 2357
            ++ S D+  KK K DL K     ++ IS  +   L E   K+++LL    V   G+ +S   N   +  V+   A+K V QG+ +VAS  + AFPIA V +GIW L P VGDL+L + + KCPY VP +    + ++  +Y +MLGY V D KVE+ D +L ++SG +RLYA+IIQ+  P       HPHGL +GW W  ++LN+EP+  VTAT++FDFLEV G+A++K++  QF K+L L+K++  P+I AIT S       RLK FL+ C++  +I  P+G LT  +W +
Sbjct:  407 LTNSKDSQAKKIKMDLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS 698

The following BLAST results are available for this feature:

BLAST of TCONS_00003145 vs. Swiss-Prot (Human)

BLAST of TCONS_00003145 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GLE1	2.731e-69	41.44	Nucleoporin GLE1 OS=Homo sapiens GN=GLE1 PE=1 SV=2	[more]

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TCONS_00003145 (transcript) - C. hemisphaerica