TCONS_00003096 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003096
Unique NameTCONS_00003096
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003096 ID=TCONS_00003096|Name=TCONS_00003096|organism=Clytia hemisphaerica|type=transcript|length=3105bp
CTGAAatgtattgaattgaatttgtttatttttgttcttGACTATTTTGA
ACAGGATAATCAAGTCACGAGAGCATCAGTCATTCCAATTATACGAAATC
AACATCATAATATTGTATAACCAGTCAGAGTCATCCATCCATTAGTTAAG
AAGAAATTCTTACCGAATACAAGACGACAGTAAATGTggtattattaaaa
aaaagtcaaggtGAAAGTTGGTTATTCAGCGAAATTATTCACTAATCATA
ATCGCAGCATAATTTTTAAGTGAATACAACATCAATACGTTAAAAAGTCT
TTGCAAGCATTGCttcaaagaaattatttgaTGTGCATATGGCAAATTTA
CCAGAATATATAGCACAGAGATTCATTCAGTTTTTAAGGAGCCAAATATG
AAAAGTACAGGAGTTTTGCCGTTGTTATTATGGTACATACTTCAAGTTTC
TGCTTATCAAGATTTGGATTTCTACCGAGAACGATGCCGAAAAGAATTAG
AACTTAAGAGAAAAACACAACAAAGATCTGAAGGAGATCAATTCATCAAA
GCACGGTACAAGAAAGTTACAAATTCAAATGACGTTTTAAAAACGTTCAA
TAACGAACCGTCCCGGTTAAATTGTGTCCAACGCTGCAAACGTTTTGCCA
ATGGCGAATGTTATGGAGTAAATTACAACCAAGAGAGCAATATTTGTCAA
TTATTGAAGAAATATGACCCATCCAGTTATTCTCCCACGAGTGAGGACGG
GAGTGAAGGTTGGGTCTCTTTTGTTCGAAGGATCGAGAAAGTGAGCAACG
AATTCTTCATGGCAGAAGAACAATCAGTGGATGAGTATAAAGTTTTACGT
CGAATACCGATCCTCCAAAAGACTTGGTTTATCTCAATTGAATTCAACGT
CACTAAGAAGTTGACACAAGAATGGTGTAATATGTTCCGCGTTGGTTATG
GTCGACACAATTATGATTATGGAAACCGTGTACCATTATTTCATTTGTAT
GGCGCATTGGAAGACACATTCAACGGATTACCAAAGCCAGCCAACAAAAA
CAATCTGCACATCTCAAGTTCGATAGACGTTAATCCAAGCACTGCATGGT
GGTCTTGGGTTGCCGAAGATGGCTTCCAACGTGCAACGGTGATGCAAACG
ACTGATGATTCTGGTGATTCCACTGAGTATCATGTTTACTTAAACGACAA
TCTGGAAATGTCTAAGTATAATTTTGGAGCGCAAGTCTTTTATGATTCAG
AAATTTCAATCTTGGATAAATGGTATGATGCTTGTCCAGATGTGATCATT
CGAAATATCCATCATATTAATGGGTGTGGCGAGCCTTAAACAACCCTAAA
TAtggaaaaaaactaaattttttggTAGGTTACCTGCACCCAATTGATAA
TGGCACTTTTCTGTTATATTTTTTCCTTCTAGCGCAAACGTTAATGAAct
aacttagaaaaaaatttggttggtgaatatctcaaaaaaaaaatgaacac
gATGTCAACATTTTTACCTATGAGTACAGAGTTTAGGATATAAACTTGGA
AGGTTTGGAAGATGTGAAAAGAAGACAGGACTTTAAATGAATGAAAACTT
TCATCGTTAATTGTTATCAAATCCAATCAATATATTAAgttcattaaaaa
aatacaattttggataaattattttgaagattagAAAATCGATTAACAAT
AAAATGGAACATAATTCGATGATACTGGTTATAATCTTCAGTTGTTGGAA
GAatgcatttttgagaaattcacgCTACTGGAGTTTATATCAACAATACA
TAGGTGATAGTGGTCGATTCTCAAGACAATTCCAGAAATTTTGGTTACAG
ATGGCTGCACATCCAGGATATTTGCCGTAATGATCATGGCATGTGTAATA
CGATGTGTGGCATCTCTATAAAAACCAAGTAGAATGGTATtacaaaaatt
ttgataaacggACAAAGTAAATTTCCTAATTATAACAAAATTCTCTAATC
GCTCTCAGAGACTTACTAACACGGGAAATCTTCAagttttaataaaatga
ctaaaGCCAGACTAAATAGAGCAAAAGCAAAATGAGGGACTCTACTCTTG
AAAGATAAAATCTTTCACCGCCAACTAATAAACGACGGGGTCCTTATAAG
GTCAggtgagatggagtttttataagataatttgataattggtcatttga
agtaataaaattacgcgttctttagaaaaagtaacaaaattgttttattg
cttgttaacgaccaaccaaatcaaataagagcttgtaaaaactccatatC
GTCCCAACAATGtgcggaggggggggggttgaaaaaaattagaattgCTA
AGCGTCGACTAAAAGTTCGTGTTCGTGTGTAAAAATTACAGTTCTCGCTT
ACTTGAAATTGGTTGTTCCATCGTTGATTTTGACTTCGTTTTCCAACCTT
TTCGTTCAACCTCTATATGGGAAGAACAAGTAAATAGTTGATCCTTAGTG
AgggtttttttaatgtttttatttggattGGTCTTGCGACAGTTTAGCTA
TAGATGTACTTAACTTTTAAATCCATATTTTATTCAACTTTATCGGGGTA
ATCCTATATTTGGATATGTGTTTGCTACCGTAcaaaatgttgagacaaac
taGACCAGCTAAACGCCAATTGGGATgtaaatctttcatttttagtaTGT
ATATAAGCGGTTTGAGAGCACTAAGAGATTTATATTGTAATACCAccgaa
acaatcccacgatgcatcgcttttttagaaaaaatcaaaaactccgataa
caTCTATTGGAAAAAAAGTCCAAGGGACTCGGGAGTTTTTTTCGTCGGAA
ACAATGACCTGTCTTCAAAgccaaaaaaacattcaaattatCCTCTTACC
TTGCTTCGTGGCATGCCATATACACACACGATAACAATTAGCGCCAATAC
ACCCAAATTCAACAAGAATCGTGTCATTTTCCCCGTTTTCACTTTAAAAT
TGTCCTCTGTGAAAATTTGACCGTGATTGCTTCAAATTTTTTAAGCTACt
tgcaatatttcaaaaaaggcaaagaaaatgaatttaatGAAAAGTTGGAT
TTCGT
Run BLAST on NCBI

protein sequence of TCONS_00003096-protein

>TCONS_00003096-protein ID=TCONS_00003096-protein|Name=TCONS_00003096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MKSTGVLPLLLWYILQVSAYQDLDFYRERCRKELELKRKTQQRSEGDQFI
KARYKKVTNSNDVLKTFNNEPSRLNCVQRCKRFANGECYGVNYNQESNIC
QLLKKYDPSSYSPTSEDGSEGWVSFVRRIEKVSNEFFMAEEQSVDEYKVL
RRIPILQKTWFISIEFNVTKKLTQEWCNMFRVGYGRHNYDYGNRVPLFHL
YGALEDTFNGLPKPANKNNLHISSSIDVNPSTAWWSWVAEDGFQRATVMQ
TTDDSGDSTEYHVYLNDNLEMSKYNFGAQVFYDSEISILDKWYDACPDVI
IRNIHHINGCGEP
Run BLAST on NCBI

transcript from alignment at sc0000025:261469..266531+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003096 ID=TCONS_00003096|Name=TCONS_00003096|organism=Clytia hemisphaerica|type=transcript|length=5063bp|location=Sequence derived from alignment at sc0000025:261469..266531+ (Clytia hemisphaerica)
CTGAAatgtattgaattgaatttgtttatttttgttcttGACTATTTTGA ACAGGATAATCAAGTCACGAGAGCATCAGTCATTCCAATTATACGAAATC AACATCATAATATTGTATAACCAGTCAGAGTCATCCATCCATTAGTTAAG AAGAAATTCTTACCGAATACAAGACGACAGTAAATGTggtattattaaaa aaaagtcaaggtGAAAGTTGGTTATTCAGCGAAATTATTCACTAATCATA ATCGCAGCATAATTTTTAAGTGAATACAACATCAATACGTTAAAAAGTCT TTGCAAGCATTGCttcaaagaaattatttgaTGTGCATATGGCAAATTTA CCAGAATATATAGCACAGAGATTCATTCAGTTTTTAAGGAGCCAAATATG AAAAGTACAGGAGTTTTGCCGTTGTTATTATGGTACATACTTCAAGTTTC TGCTTATCAAGATTTGGATTTCTACCGAGAACGATGCCGAAAAGAATTAG AACTTAAGAGAAAAACACAACAAAGATCTGAAGGAGATCAATTCATCAAA GCACGGTACAAGAAAGTTACAAATTCAAATGACGTTTTAAAAACGTTCAA TAACGAACCGTCCCGGTTAAATTGTGTCCAACGCTGCAAACGTTTTGCCA ATGGCGAATGTTATGGAGTAAATTACAACCAAGAGAGCAATATTTGTCAA TTATTGAAGAAATATGACCCATCCAGTTATTCTCCCACGAGTGAGGACGG GAGTGAAGGTTGGGTCTCTTTTGTTCGAAGGGTAAGTTTTGGACGCCAAG AGGTCTTTCTTGCTAGCATATATAGCTCTTTTTATTTGTTGAGCTATATC CCATatgaattttaattatttcgAAAAGTTTAACATGTaggcaaattttt gaaatacgTGAGGGGTCTTATTTCAATGCTCTATGTAGTAACAtcgaatt gaaaaatctttcttttaaaaTACATTAGGCTTTCtggaaagaaattgaaa acttattCTCAACTCTTCCTTCTTCCTTTTAGATCGAGAAAGTGAGCAAC GAATTCTTCATGGCAGAAGGTAGGTGACTTCCAATTCTATGAATGATCTG AATATTCGGAAATCTAGTTAGCATAGTCTAAAATCTAATGCGAATTTTGA GGCCTAAATAAAATCGCACACGGTTTATAAAGAtttcatttttacataag tgttcatGTTCATGTtacatatcaggacagtgtctgcctattgttatatg cttatataagcaaaaaatgtttttctttttctctttctgaccaatccaat gtgaaaaagcttgtaaattaaaattgatgagtaagcaaacgttatcactc ttaataaaaaacaaaacctttaacatccaATGAGATGCTACAAATTTTCG GTCTTGTACCTTTAGGTTTTGATCCTAGGAGTGACATGACCAATACCGCC CTGTTTTTTTAAACCGggttagataaaaaaaactaccattcgaatttgaa atcaaaaaacaGTGTTATAAGTTTTTCCGTCTCAGCGAAGTTAAAAAGAT GGCTTTTtcgtttcaaaattttgcataaTTCGCTAATTTGCTGTGTTAAA TCCATTTTCCGTGTCTGATGAAAaatcttgctttgaccactaaaaagata aaatatttcaaaatttcgaaatcgACTTCCTTTTTCcaacttacacgttt ttttccaATTCAAATACAGAACAATCAGTGGATGAGTATAAAGTTTTACG TCGAATACCGATCCTCCAAAAGACTTGGTTTATCTCAATTGAATTCAACG TCACTAAGAAGTTGACACAAGAATGGTGTAATATGTTCCGCGTTGGTTAT GGTCGACACAATTATGATTATGGAAACCGTGTACCATTATTTCATTTGTA TGGCGCATGTAAGTAGTGTGGTATTCTCTTATTTTTCAAGGTCTTCTGAC TAAAGCCCTCTACATTTCGTATACTttgagggggtttatctaaagaatcc tgcattactaaaaatagacaaaaagaaagacaaatttcataaaaaacgac atatttcgccgtccacaaccccgaccgaaagtgactgtaccacccctagc gATTCGTTCCCTTTCGTTTATcgcgggaattaactacatgtggtctaaaa gaacgacaaattacacatgcgtgttacaatgcaggatcctttagaggaac agactgctttaatcagattaaatttcgcgagatttaatttcgcgaaaata tgatttgttgttttacgggctaagctacccaaaaaaagggtcggtcggtc ggcgaaaaaattaaaataaaagtaggatttcacctataaaatctcctaaa aagaactacatcttgacaaaaatgtgaaaaagaagataaaaagacacaaa aagctcgaattcatacacgtttttttatttattagaacacctaaaattta cctgagcctggatgtgcttatttttttagcaattttcagcctaaaatgtt cttaaatgcgttcttaatttttcagactactctaaatcgacaatatcatg aaaaataaagagcacttaaaattggtaaaatttcgacaatatttgactct cgattttagaaaatccatccctaagttcgcttaaaactgcttgaaaagag gaaaaaattttagtttcttgtcattttttcccaaactgaggctgggcatg ttcttacgatgttcttaatgtttcgacgaatttcagcctcaatgttctta tgaactgggttctaataaaaccAAAGTCTAGCTCTTTTCCAAAAGCTTTC CAAAAACTTGTAACTCTTATATCTCGCCTTTAGAAAAGAGTTACacagtc aaaaagattttggaagTTTGGCTCACAATTATTTAAGTACGTAATCAACA GGCAAAATATCTCCAACCATCTGATTATTCCTTTaattaaaagatatttt cttcTCTTCTTTCAGTGGAAGACACATTCAACGGATTACCAAAGCCAGCC AACAAAAACAATCTGCACATCTCAAGTTCGATAGACGTTAATCCAAGCAC TGCATGGTGGTCTTGGGTTGCCGAAGATGGCTTCCAACGTGCAACGGTGA TGCAAACGACTGATGATTCTGGTGATTCCACTGAGTATCATGTTTACTTA AACGACAATCTGGAAATGTCTAAGTATAATTTTGGAGCGCAAGTCTTTTA TGATTCAGAAATTTCAATCTTGGATAAATGGTATGATGCTTGTCCAGATG TGATCATTCGAAATATCCATCATATTAATGGGTGTGGCGAGCCTTAAACA ACCCTAAATAtggaaaaaaactaaattttttggTAGGTTACCTGCACCCA ATTGATAATGGCACTTTTCTGTTATATTTTTTCCTTCTAGCGCAAACGTT AATGAActaacttagaaaaaaatttggttggtgaatatctcaaaaaaaaa atgaacacgATGTCAACATTTTTACCTATGAGTACAGAGTTTAGGATATA AACTTGGAAGGTTTGGAAGATGTGAAAAGAAGACAGGACTTTAAATGAAT GAAAACTTTCATCGTTAATTGTTATCAAATCCAATCAATATATTAAgttc attaaaaaaatacaattttggataaattattttgaagattagAAAATCGA TTAACAATAAAATGGAACATAATTCGATGATACTGGTTATAATCTTCAGT TGTTGGAAGAatgcatttttgagaaattcacgCTACTGGAGTTTATATCA ACAATACATAGGTGATAGTGGTCGATTCTCAAGACAATTCCAGAAATTTT GGTTACAGATGGCTGCACATCCAGGATATTTGCCGTAATGATCATGGCAT GTGTAATACGATGTGTGGCATCTCTATAAAAACCAAGTAGAATGGTATta caaaaattttgataaacggACAAAGTAAATTTCCTAATTATAACAAAATT CTCTAATCGCTCTCAGAGACTTACTAACACGGGAAATCTTCAagttttaa taaaatgactaaaGCCAGACTAAATAGAGCAAAAGCAAAATGAGGGACTC TACTCTTGAAAGATAAAATCTTTCACCGCCAACTAATAAACGACGGGGTC CTTATAAGGTCAggtgagatggagtttttataagataatttgataattgg tcatttgaagtaataaaattacgcgttctttagaaaaagtaacaaaattg ttttattgcttgttaacgaccaaccaaatcaaataagagcttgtaaaaac tccatatCGTCCCAACAATGtgcggaggggggggggttgaaaaaaattag aattgCTAAGCGTCGACTAAAAGTTCGTGTTCGTGTGTAAAAATTACAGT TCTCGCTTACTTGAAATTGGTTGTTCCATCGTTGATTTTGACTTCGTTTT CCAACCTTTTCGTTCAACCTCTATATGGGAAGAACAAGTAAATAGTTGAT CCTTAGTGAgggtttttttaatgtttttatttggattGGTCTTGCGACAG TTTAGCTATAGATGTACTTAACTTTTAAATCCATATTTTATTCAACTTTA TCGGGGTAATCCTATATTTGGATATGTGTTTGCTACCGTAcaaaatgttg agacaaactaGACCAGCTAAACGCCAATTGGGATgtaaatctttcatttt tagtaTGTATATAAGCGGTTTGAGAGCACTAAGAGATTTATATTGTAATA CCAccgaaacaatcccacgatgcatcgcttttttagaaaaaatcaaaaac tccgataacaTCTATTGGAAAAAAAGTCCAAGGGACTCGGGAGTTTTTTT CGTCGGAAACAATGACCTGTCTTCAAAgccaaaaaaacattcaaattatC CTCTTACCTTGCTTCGTGGCATGCCATATACACACACGATAACAATTAGC GCCAATACACCCAAATTCAACAAGAATCGTGTCATTTTCCCCGTTTTCAC TTTAAAATTGTCCTCTGTGAAAATTTGACCGTGATTGCTTCAAATTTTTT AAGCTACttgcaatatttcaaaaaaggcaaagaaaatgaatttaatGAAA AGTTGGATTTCGT

Coding sequence (CDS) from alignment at sc0000025:261469..266531+

>TCONS_00003096 ID=TCONS_00003096|Name=TCONS_00003096|organism=Clytia hemisphaerica|type=CDS|length=3768bp|location=Sequence derived from alignment at sc0000025:261469..266531+ (Clytia hemisphaerica)
ATGAAAAGTACAGGAGTTTTGCCGTTGTTATTATGGTACATACTTCAAGT
TTCTGCTTATCAAGATTTGGATTTCTACCGAGAACGATGCCGAAAAGAAT
TAGAACTTAAGAGAAAAACACAACAAAGATCTGAAGGAGATCAATTCATC
AAAGCACGGTACAAGAAAGTTACAAATTCAAATGACGTTTTAAAAACGTT
CAATAACGAACCGTCCCGGTTAAATTGTGTCCAACGCTGCAAACGTTTTG
CCAATGGCGAATGTTATGGAGTAAATTACAACCAAGAGAGCAATATTTGT
CAATTATTGAAGAAATATGACCCATCCAGTTATTCTCCCACGAGTGAGGA
CGGGAGTGAAGGTTGGGTCTCTTTTGTTCGAAGGATCGAGAAAGTGAGCA
ACGAATTCTTCATGGCAGAAGAACAATCAGTGGATGAGTATAAAGTTTTA
CGTCGAATACCGATCCTCCAAAAGACTTGGTTTATCTCAATTGAATTCAA
CGTCACTAAGAAGTTGACACAAGAATGGTGTAATATGTTCCGCGTTGGTT
ATGGTCGACACAATTATGATTATGGAAACCGTGTACCATTATTTCATTTG
TATGGCGCATTGGAAGACACATTCAACGGATTACCAAAGCCAGCCAACAA
AAACAATCTGCACATCTCAAGTTCGATAGACGTTAATCCAAGCACTGCAT
GGTGGTCTTGGGTTGCCGAAGATGGCTTCCAACGTGCAACGGTGATGCAA
ACGACTGATGATTCTGGTGATTCCACTGAGTATCATGTTTACTTAAACGA
CAATCTGGAAATGTCTAAGTATAATTTTGGAGCGCAAGTCTTTTATGATT
CAGAAATTTCAATCTTGGATAAATGGTATGATGCTTGTCCAGATGTGATC
ATTCGAAATATCCATCATATTAATGGGTGTGGCGAGCCTTAAATGAAAAG
TACAGGAGTTTTGCCGTTGTTATTATGGTACATACTTCAAGTTTCTGCTT
ATCAAGATTTGGATTTCTACCGAGAACGATGCCGAAAAGAATTAGAACTT
AAGAGAAAAACACAACAAAGATCTGAAGGAGATCAATTCATCAAAGCACG
GTACAAGAAAGTTACAAATTCAAATGACGTTTTAAAAACGTTCAATAACG
AACCGTCCCGGTTAAATTGTGTCCAACGCTGCAAACGTTTTGCCAATGGC
GAATGTTATGGAGTAAATTACAACCAAGAGAGCAATATTTGTCAATTATT
GAAGAAATATGACCCATCCAGTTATTCTCCCACGAGTGAGGACGGGAGTG
AAGGTTGGGTCTCTTTTGTTCGAAGGATCGAGAAAGTGAGCAACGAATTC
TTCATGGCAGAAGAACAATCAGTGGATGAGTATAAAGTTTTACGTCGAAT
ACCGATCCTCCAAAAGACTTGGTTTATCTCAATTGAATTCAACGTCACTA
AGAAGTTGACACAAGAATGGTGTAATATGTTCCGCGTTGGTTATGGTCGA
CACAATTATGATTATGGAAACCGTGTACCATTATTTCATTTGTATGGCGC
ATTGGAAGACACATTCAACGGATTACCAAAGCCAGCCAACAAAAACAATC
TGCACATCTCAAGTTCGATAGACGTTAATCCAAGCACTGCATGGTGGTCT
TGGGTTGCCGAAGATGGCTTCCAACGTGCAACGGTGATGCAAACGACTGA
TGATTCTGGTGATTCCACTGAGTATCATGTTTACTTAAACGACAATCTGG
AAATGTCTAAGTATAATTTTGGAGCGCAAGTCTTTTATGATTCAGAAATT
TCAATCTTGGATAAATGGTATGATGCTTGTCCAGATGTGATCATTCGAAA
TATCCATCATATTAATGGGTGTGGCGAGCCTTAAATGAAAAGTACAGGAG
TTTTGCCGTTGTTATTATGGTACATACTTCAAGTTTCTGCTTATCAAGAT
TTGGATTTCTACCGAGAACGATGCCGAAAAGAATTAGAACTTAAGAGAAA
AACACAACAAAGATCTGAAGGAGATCAATTCATCAAAGCACGGTACAAGA
AAGTTACAAATTCAAATGACGTTTTAAAAACGTTCAATAACGAACCGTCC
CGGTTAAATTGTGTCCAACGCTGCAAACGTTTTGCCAATGGCGAATGTTA
TGGAGTAAATTACAACCAAGAGAGCAATATTTGTCAATTATTGAAGAAAT
ATGACCCATCCAGTTATTCTCCCACGAGTGAGGACGGGAGTGAAGGTTGG
GTCTCTTTTGTTCGAAGGATCGAGAAAGTGAGCAACGAATTCTTCATGGC
AGAAGAACAATCAGTGGATGAGTATAAAGTTTTACGTCGAATACCGATCC
TCCAAAAGACTTGGTTTATCTCAATTGAATTCAACGTCACTAAGAAGTTG
ACACAAGAATGGTGTAATATGTTCCGCGTTGGTTATGGTCGACACAATTA
TGATTATGGAAACCGTGTACCATTATTTCATTTGTATGGCGCATTGGAAG
ACACATTCAACGGATTACCAAAGCCAGCCAACAAAAACAATCTGCACATC
TCAAGTTCGATAGACGTTAATCCAAGCACTGCATGGTGGTCTTGGGTTGC
CGAAGATGGCTTCCAACGTGCAACGGTGATGCAAACGACTGATGATTCTG
GTGATTCCACTGAGTATCATGTTTACTTAAACGACAATCTGGAAATGTCT
AAGTATAATTTTGGAGCGCAAGTCTTTTATGATTCAGAAATTTCAATCTT
GGATAAATGGTATGATGCTTGTCCAGATGTGATCATTCGAAATATCCATC
ATATTAATGGGTGTGGCGAGCCTTAAATGAAAAGTACAGGAGTTTTGCCG
TTGTTATTATGGTACATACTTCAAGTTTCTGCTTATCAAGATTTGGATTT
CTACCGAGAACGATGCCGAAAAGAATTAGAACTTAAGAGAAAAACACAAC
AAAGATCTGAAGGAGATCAATTCATCAAAGCACGGTACAAGAAAGTTACA
AATTCAAATGACGTTTTAAAAACGTTCAATAACGAACCGTCCCGGTTAAA
TTGTGTCCAACGCTGCAAACGTTTTGCCAATGGCGAATGTTATGGAGTAA
ATTACAACCAAGAGAGCAATATTTGTCAATTATTGAAGAAATATGACCCA
TCCAGTTATTCTCCCACGAGTGAGGACGGGAGTGAAGGTTGGGTCTCTTT
TGTTCGAAGGATCGAGAAAGTGAGCAACGAATTCTTCATGGCAGAAGAAC
AATCAGTGGATGAGTATAAAGTTTTACGTCGAATACCGATCCTCCAAAAG
ACTTGGTTTATCTCAATTGAATTCAACGTCACTAAGAAGTTGACACAAGA
ATGGTGTAATATGTTCCGCGTTGGTTATGGTCGACACAATTATGATTATG
GAAACCGTGTACCATTATTTCATTTGTATGGCGCATTGGAAGACACATTC
AACGGATTACCAAAGCCAGCCAACAAAAACAATCTGCACATCTCAAGTTC
GATAGACGTTAATCCAAGCACTGCATGGTGGTCTTGGGTTGCCGAAGATG
GCTTCCAACGTGCAACGGTGATGCAAACGACTGATGATTCTGGTGATTCC
ACTGAGTATCATGTTTACTTAAACGACAATCTGGAAATGTCTAAGTATAA
TTTTGGAGCGCAAGTCTTTTATGATTCAGAAATTTCAATCTTGGATAAAT
GGTATGATGCTTGTCCAGATGTGATCATTCGAAATATCCATCATATTAAT
GGGTGTGGCGAGCCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001718XLOC_001718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003096-exon-sc0000025-1491911889:261469..262249TCONS_00003096-exon-sc0000025-1491911889:261469..262249Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1510915933:261469..262249TCONS_00003096-exon-sc0000025-1510915933:261469..262249Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1575043694:261469..262249TCONS_00003096-exon-sc0000025-1575043694:261469..262249Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1491911889:262501..262537TCONS_00003096-exon-sc0000025-1491911889:262501..262537Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1510915933:262501..262537TCONS_00003096-exon-sc0000025-1510915933:262501..262537Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1575043694:262501..262537TCONS_00003096-exon-sc0000025-1575043694:262501..262537Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1491911889:263188..263376TCONS_00003096-exon-sc0000025-1491911889:263188..263376Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1510915933:263188..263376TCONS_00003096-exon-sc0000025-1510915933:263188..263376Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1575043694:263188..263376TCONS_00003096-exon-sc0000025-1575043694:263188..263376Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1491911889:264434..266531TCONS_00003096-exon-sc0000025-1491911889:264434..266531Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1510915933:264434..266531TCONS_00003096-exon-sc0000025-1510915933:264434..266531Clytia hemisphaericaexon
TCONS_00003096-exon-sc0000025-1575043694:264434..266531TCONS_00003096-exon-sc0000025-1575043694:264434..266531Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003096-proteinTCONS_00003096-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:261469..266531 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.122531 0.0364736 0.0858915 0.0421659 0.148781 0.0199111 0.0897555 0.223299 0.0789984 0.193278 0.132658 0.093839 2.78672 1.57309 0.107212 0.114042 0.046896 0.0357165 3.02573 5.47057 0.139044 0.158334 0.261177 0.230667 0.117508 0.103924 10.048 8.01595 0.112605 0.0831413
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003096 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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