XLOC_001718 (gene) - C. hemisphaerica

Overview
NameXLOC_001718
Unique NameXLOC_001718
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:261469..266531+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001718 ID=XLOC_001718|Name=XLOC_001718|organism=Clytia hemisphaerica|type=gene|length=5063bp|location=Sequence derived from alignment at sc0000025:261469..266531+ (Clytia hemisphaerica)
CTGAAatgtattgaattgaatttgtttatttttgttcttGACTATTTTGA ACAGGATAATCAAGTCACGAGAGCATCAGTCATTCCAATTATACGAAATC AACATCATAATATTGTATAACCAGTCAGAGTCATCCATCCATTAGTTAAG AAGAAATTCTTACCGAATACAAGACGACAGTAAATGTggtattattaaaa aaaagtcaaggtGAAAGTTGGTTATTCAGCGAAATTATTCACTAATCATA ATCGCAGCATAATTTTTAAGTGAATACAACATCAATACGTTAAAAAGTCT TTGCAAGCATTGCttcaaagaaattatttgaTGTGCATATGGCAAATTTA CCAGAATATATAGCACAGAGATTCATTCAGTTTTTAAGGAGCCAAATATG AAAAGTACAGGAGTTTTGCCGTTGTTATTATGGTACATACTTCAAGTTTC TGCTTATCAAGATTTGGATTTCTACCGAGAACGATGCCGAAAAGAATTAG AACTTAAGAGAAAAACACAACAAAGATCTGAAGGAGATCAATTCATCAAA GCACGGTACAAGAAAGTTACAAATTCAAATGACGTTTTAAAAACGTTCAA TAACGAACCGTCCCGGTTAAATTGTGTCCAACGCTGCAAACGTTTTGCCA ATGGCGAATGTTATGGAGTAAATTACAACCAAGAGAGCAATATTTGTCAA TTATTGAAGAAATATGACCCATCCAGTTATTCTCCCACGAGTGAGGACGG GAGTGAAGGTTGGGTCTCTTTTGTTCGAAGGGTAAGTTTTGGACGCCAAG AGGTCTTTCTTGCTAGCATATATAGCTCTTTTTATTTGTTGAGCTATATC CCATatgaattttaattatttcgAAAAGTTTAACATGTaggcaaattttt gaaatacgTGAGGGGTCTTATTTCAATGCTCTATGTAGTAACAtcgaatt gaaaaatctttcttttaaaaTACATTAGGCTTTCtggaaagaaattgaaa acttattCTCAACTCTTCCTTCTTCCTTTTAGATCGAGAAAGTGAGCAAC GAATTCTTCATGGCAGAAGGTAGGTGACTTCCAATTCTATGAATGATCTG AATATTCGGAAATCTAGTTAGCATAGTCTAAAATCTAATGCGAATTTTGA GGCCTAAATAAAATCGCACACGGTTTATAAAGAtttcatttttacataag tgttcatGTTCATGTtacatatcaggacagtgtctgcctattgttatatg cttatataagcaaaaaatgtttttctttttctctttctgaccaatccaat gtgaaaaagcttgtaaattaaaattgatgagtaagcaaacgttatcactc ttaataaaaaacaaaacctttaacatccaATGAGATGCTACAAATTTTCG GTCTTGTACCTTTAGGTTTTGATCCTAGGAGTGACATGACCAATACCGCC CTGTTTTTTTAAACCGggttagataaaaaaaactaccattcgaatttgaa atcaaaaaacaGTGTTATAAGTTTTTCCGTCTCAGCGAAGTTAAAAAGAT GGCTTTTtcgtttcaaaattttgcataaTTCGCTAATTTGCTGTGTTAAA TCCATTTTCCGTGTCTGATGAAAaatcttgctttgaccactaaaaagata aaatatttcaaaatttcgaaatcgACTTCCTTTTTCcaacttacacgttt ttttccaATTCAAATACAGAACAATCAGTGGATGAGTATAAAGTTTTACG TCGAATACCGATCCTCCAAAAGACTTGGTTTATCTCAATTGAATTCAACG TCACTAAGAAGTTGACACAAGAATGGTGTAATATGTTCCGCGTTGGTTAT GGTCGACACAATTATGATTATGGAAACCGTGTACCATTATTTCATTTGTA TGGCGCATGTAAGTAGTGTGGTATTCTCTTATTTTTCAAGGTCTTCTGAC TAAAGCCCTCTACATTTCGTATACTttgagggggtttatctaaagaatcc tgcattactaaaaatagacaaaaagaaagacaaatttcataaaaaacgac atatttcgccgtccacaaccccgaccgaaagtgactgtaccacccctagc gATTCGTTCCCTTTCGTTTATcgcgggaattaactacatgtggtctaaaa gaacgacaaattacacatgcgtgttacaatgcaggatcctttagaggaac agactgctttaatcagattaaatttcgcgagatttaatttcgcgaaaata tgatttgttgttttacgggctaagctacccaaaaaaagggtcggtcggtc ggcgaaaaaattaaaataaaagtaggatttcacctataaaatctcctaaa aagaactacatcttgacaaaaatgtgaaaaagaagataaaaagacacaaa aagctcgaattcatacacgtttttttatttattagaacacctaaaattta cctgagcctggatgtgcttatttttttagcaattttcagcctaaaatgtt cttaaatgcgttcttaatttttcagactactctaaatcgacaatatcatg aaaaataaagagcacttaaaattggtaaaatttcgacaatatttgactct cgattttagaaaatccatccctaagttcgcttaaaactgcttgaaaagag gaaaaaattttagtttcttgtcattttttcccaaactgaggctgggcatg ttcttacgatgttcttaatgtttcgacgaatttcagcctcaatgttctta tgaactgggttctaataaaaccAAAGTCTAGCTCTTTTCCAAAAGCTTTC CAAAAACTTGTAACTCTTATATCTCGCCTTTAGAAAAGAGTTACacagtc aaaaagattttggaagTTTGGCTCACAATTATTTAAGTACGTAATCAACA GGCAAAATATCTCCAACCATCTGATTATTCCTTTaattaaaagatatttt cttcTCTTCTTTCAGTGGAAGACACATTCAACGGATTACCAAAGCCAGCC AACAAAAACAATCTGCACATCTCAAGTTCGATAGACGTTAATCCAAGCAC TGCATGGTGGTCTTGGGTTGCCGAAGATGGCTTCCAACGTGCAACGGTGA TGCAAACGACTGATGATTCTGGTGATTCCACTGAGTATCATGTTTACTTA AACGACAATCTGGAAATGTCTAAGTATAATTTTGGAGCGCAAGTCTTTTA TGATTCAGAAATTTCAATCTTGGATAAATGGTATGATGCTTGTCCAGATG TGATCATTCGAAATATCCATCATATTAATGGGTGTGGCGAGCCTTAAACA ACCCTAAATAtggaaaaaaactaaattttttggTAGGTTACCTGCACCCA ATTGATAATGGCACTTTTCTGTTATATTTTTTCCTTCTAGCGCAAACGTT AATGAActaacttagaaaaaaatttggttggtgaatatctcaaaaaaaaa atgaacacgATGTCAACATTTTTACCTATGAGTACAGAGTTTAGGATATA AACTTGGAAGGTTTGGAAGATGTGAAAAGAAGACAGGACTTTAAATGAAT GAAAACTTTCATCGTTAATTGTTATCAAATCCAATCAATATATTAAgttc attaaaaaaatacaattttggataaattattttgaagattagAAAATCGA TTAACAATAAAATGGAACATAATTCGATGATACTGGTTATAATCTTCAGT TGTTGGAAGAatgcatttttgagaaattcacgCTACTGGAGTTTATATCA ACAATACATAGGTGATAGTGGTCGATTCTCAAGACAATTCCAGAAATTTT GGTTACAGATGGCTGCACATCCAGGATATTTGCCGTAATGATCATGGCAT GTGTAATACGATGTGTGGCATCTCTATAAAAACCAAGTAGAATGGTATta caaaaattttgataaacggACAAAGTAAATTTCCTAATTATAACAAAATT CTCTAATCGCTCTCAGAGACTTACTAACACGGGAAATCTTCAagttttaa taaaatgactaaaGCCAGACTAAATAGAGCAAAAGCAAAATGAGGGACTC TACTCTTGAAAGATAAAATCTTTCACCGCCAACTAATAAACGACGGGGTC CTTATAAGGTCAggtgagatggagtttttataagataatttgataattgg tcatttgaagtaataaaattacgcgttctttagaaaaagtaacaaaattg ttttattgcttgttaacgaccaaccaaatcaaataagagcttgtaaaaac tccatatCGTCCCAACAATGtgcggaggggggggggttgaaaaaaattag aattgCTAAGCGTCGACTAAAAGTTCGTGTTCGTGTGTAAAAATTACAGT TCTCGCTTACTTGAAATTGGTTGTTCCATCGTTGATTTTGACTTCGTTTT CCAACCTTTTCGTTCAACCTCTATATGGGAAGAACAAGTAAATAGTTGAT CCTTAGTGAgggtttttttaatgtttttatttggattGGTCTTGCGACAG TTTAGCTATAGATGTACTTAACTTTTAAATCCATATTTTATTCAACTTTA TCGGGGTAATCCTATATTTGGATATGTGTTTGCTACCGTAcaaaatgttg agacaaactaGACCAGCTAAACGCCAATTGGGATgtaaatctttcatttt tagtaTGTATATAAGCGGTTTGAGAGCACTAAGAGATTTATATTGTAATA CCAccgaaacaatcccacgatgcatcgcttttttagaaaaaatcaaaaac tccgataacaTCTATTGGAAAAAAAGTCCAAGGGACTCGGGAGTTTTTTT CGTCGGAAACAATGACCTGTCTTCAAAgccaaaaaaacattcaaattatC CTCTTACCTTGCTTCGTGGCATGCCATATACACACACGATAACAATTAGC GCCAATACACCCAAATTCAACAAGAATCGTGTCATTTTCCCCGTTTTCAC TTTAAAATTGTCCTCTGTGAAAATTTGACCGTGATTGCTTCAAATTTTTT AAGCTACttgcaatatttcaaaaaaggcaaagaaaatgaatttaatGAAA AGTTGGATTTCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003096TCONS_00003096Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003096-proteinTCONS_00003096-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:261469..266531 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.04 0.09 0.04 0.15 0.02 0.09 0.22 0.08 0.19 0.13 0.09 2.79 1.57 0.11 0.11 0.05 0.04 3.03 5.47 0.14 0.16 0.26 0.23 0.12 0.1 10.05 8.02 0.11 0.08