TCONS_00003091 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003091
Unique NameTCONS_00003091
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1857

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003091 ID=TCONS_00003091|Name=TCONS_00003091|organism=Clytia hemisphaerica|type=transcript|length=1857bp
GAAAACCAGTTCCATTCCTCACCGGTCAAAGTTTCACGCCTTCTACCACC
CATGTCTGACGCCTATACAATCAACAATgaacattatttttgtgaaaatg
gaTTCACGTATATGAGGAATGATGCAGTGTCACCTCCTTGTTTGGGAATG
CAATCTCTTATGAGGAAAAGTGAAGACATTGGTAATATCCTCCTGACAGT
TGATAATCCAAAAGATCCAGTTGTTATTTACGAATATGAAAGATCAATGG
GTCACGGTCATCTAAGTCAATGGAGATTGAGATCTAAAGGCCTTGGACTA
ATTTTCAATACTAAAAATGAAAGACCGTTGCTTTGCAAATCACTAGTTGG
TGTATCTTTCGAAACTAATCAGTTGGATGGTTGGTTGCATTCAAATGTTG
TCCCCTTTTCCATCAATTCGACAAGAACAAGAGGAAACTACCTGGAGTTT
TCACAAGATTGGGCAAGTTTTGATACATTCCAAGGACAATTAATCAGAAT
GAACATGCGATGCTCTCACACTGGTAATACGTTCGAAATGTACATCAAGT
TTGAAGGATCTAGAACTTATTTTGACACGTCGAAAACAAACAGTCCTCCA
ACATATACTCCAAGACCATCACTGAGAAGAACTACAAACTATTATTACCC
GCCTCCAACAGGGCGTTATCCGACACAAGGGCGAACTACCAACTCATGGA
ATTCTGGCGGACCGTATACATCACGCGGACCGTATACATCACGCGGGCCG
TATACATCACGCGGTCCTTTTACATCACGCGGTCCTTTTACAACAAGAAG
AATTAATACGTACACTTGGACTAGTTGGGCCCCTGTGACGAATTTCCCGC
CTCAAACAACTAGCCATCCTGTTGTGAATTCGCAACAACAGAGTAGCCCT
GGCACGGGCATGATTGTAGGATCAACTATTGGTGGTCTGGTGGCTTTGAT
CATTTTGGTCGTTCTGATCTATATCTGTTACATGAAAAGAAGGCAAAGAG
AACCACGAAGCAAGCTACAAAATGAAGATTCCATCTATAAAAGGCAACGC
CAACAGAATCCGTACATAACAAATGATAAAGCTCAAGCACCATGGGATAG
GACTGCTTCCAATGCACTCAAAATACCTGAAGATCCAAAACGCAAAGAAA
CCGAAGAAGCAATCATCTTAGCCATGGAGATCATTCAAGAACGACAATCC
AAGAAAATCAAACCAGATGTTGTTCCTAGTTACATCAAAAACAGACCAGT
GCCACAAGTACAAAACACAGACCCGAGACCTAAGATCGGCCCCTTATCAA
AGTCTGGCGGGTACGAAGAAGAGAGCCAGGACCTTTATGTGGATCCTGCA
ACCGGGGCACAAGACGATGCTTATTCTTCACTGAGGAAGGATGATTGTCA
AGAGAACTTGTACTTGGATCCCGCTGAAGCCAAAAAGCATGGAGCACAGC
CAATAGCTGAAGAGCAATATTTGGATCTAGATCAAGCAAAGGAAGAATAT
ATGAAGTCAATGATGATCGAAACAGATGATACTTGCTAAACCTTTGACGA
AGTCATGATAAAAGCATGATCTAAATTTAGCTTTAATTGGAACAATCATA
AGTGCTTTAAGATTTAAGATTTTGATGGGACATCCTGCATTTGAATATGT
GGTATGTGGTAAGATTATCTTTAgtatttgattgatttgaaactgatttt
tagAGTTTTAGATGTAGATCTCAACCGTAAAGATTGAGTTCCATACATTT
TCCACAATATAATGATTTATGGACCAAGTAGTGACATTTTAACTTTAGAT
AATTTATCTGTAAATTTTGCCCTGCAAGATATTCTCTTAATGTACAAAAT
TATATAA
Run BLAST on NCBI

protein sequence of TCONS_00003091-protein

>TCONS_00003091-protein ID=TCONS_00003091-protein|Name=TCONS_00003091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
ENQFHSSPVKVSRLLPPMSDAYTINNEHYFCENGFTYMRNDAVSPPCLGM
QSLMRKSEDIGNILLTVDNPKDPVVIYEYERSMGHGHLSQWRLRSKGLGL
IFNTKNERPLLCKSLVGVSFETNQLDGWLHSNVVPFSINSTRTRGNYLEF
SQDWASFDTFQGQLIRMNMRCSHTGNTFEMYIKFEGSRTYFDTSKTNSPP
TYTPRPSLRRTTNYYYPPPTGRYPTQGRTTNSWNSGGPYTSRGPYTSRGP
YTSRGPFTSRGPFTTRRINTYTWTSWAPVTNFPPQTTSHPVVNSQQQSSP
GTGMIVGSTIGGLVALIILVVLIYICYMKRRQREPRSKLQNEDSIYKRQR
QQNPYITNDKAQAPWDRTASNALKIPEDPKRKETEEAIILAMEIIQERQS
KKIKPDVVPSYIKNRPVPQVQNTDPRPKIGPLSKSGGYEEESQDLYVDPA
TGAQDDAYSSLRKDDCQENLYLDPAEAKKHGAQPIAEEQYLDLDQAKEEY
MKSMMIETDDTC
Run BLAST on NCBI

transcript from alignment at sc0000025:179481..184715+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003091 ID=TCONS_00003091|Name=TCONS_00003091|organism=Clytia hemisphaerica|type=transcript|length=5235bp|location=Sequence derived from alignment at sc0000025:179481..184715+ (Clytia hemisphaerica)
GAAAACCAGGTAATCCATATGTATGCTTGATTGTAAAGTTTCTTCCTACT
GTAGCCCCTTCCTGGCTTACAACTCAATGCTAGAAATTCActcaaataaa
ttaaaaaccTCTTACCTTTAgtaaatcattttcattctTCCATTTATCAG
TTCCATTCCTCACCGGTCAAAGTTTCACGCCTTCTACCACCCATGTCTGA
CGCCTATACAATCAACAATgaacattatttttgtgaaaatggaTTCACGT
ATATGAGGAATGATGCAGTGTCACCTCCTTGTTTGGGAATGCAATCTCTT
ATGAGGAAAAGTGAAGACATTGGTTCGTCCTTTCTTCTTATTCTGTagtt
atttcaacgttcatttgaCGTTCATTTGACGATATATGCTCGTTATGAAC
GTTTTTATGACGTTTTATGTCAGCAATAAAATGTCATTCTTccgtttttc
aacgtttttcattcattcattcattcattcattcattcattcattccttG
TTCATGATCAGGGATCAGTATCCCCTTCATGAAAAAGTTCACTTCTTGTA
TCAtcgtattttttatattttagtcAACTTGTAATGGTATCTAAAGAATA
GAAATAcaaataaattcaaaagaacAAACTCTTAAAAGGGGAGTGGAACT
AAGCTAGGATAGAGATCAAAACGCAATTTTTTTAGTTCCCCCTAACCACC
AACCACCAACCCCTATACTACGATGTTTGTAGAACTAGAGAAAGAGTTGT
AGCTTTATTTCCAGGATTATGAGAATCAAAATTAGCCCCTTCCCCATTTG
CAAAGACATTCAAGAGATGGCAGTAGGACTATATGGATATATCTTCATTA
CAAATCTATCTTTTATTCTAACCAGGTAATATCCTCCTGACAGTTGATAA
TCCAAAAGATCCAGTTGTTATTTACGAATATGAAAGATCAATGGGTCACG
GTCATCTAAGTCAATGGAGATTGAGATCTAAAGGCCTTGGACTAATTTTC
AATACTAAAAATGAAAGACCGTTGCTTTGCAAATCACTAGTTGGTGTATC
TTTCGAAACTAATCAGTTGGATGGTTGGTTGCATTCAAATGTTGTCCCCT
TTTCCATCAATTCGACAAGAACAAGAGGAAACTACCTGGAGGTAAGTAGA
ATTTTATATGAGACGGAAAACGCAACATCTAACAGCGGACAACCCATTAT
AATCCTCCACAATATCatataaataaaaatgtacCGCTCAACCGCCTTTT
CTTGTTCTGTTCACagtggcccttcgtggaaacaattctccagctgccta
aaagcttttgaatttttcggagcatgccacttaaaacatatgttattatt
attattattattaataacTCAGTAAACTTTTCCCAAATTTTTCTGATCAG
CTGGTTTTTTCAAGAACCAAAAAGACAGGGTATTATCAAAGTGGGATATC
CTCAAAGTGAGAAGGAATACGTAACCTCTGATTCACCTCATAATAATACC
TTTCTTCCCGTACTGATGAAGAAAGAAACACTATCCTTTAAATAGCTGGA
ACAAACCCTCAGAAATATCAATCTATTTGTCTGATCTCTACTGTCTCTTT
AACGAATTCAAACGTCTATTTGGCTTAGAATAATATTTTGTTCATAGTTT
TCACAAGATTGGGCAAGTTTTGATACATTCCAAGGACAATTAATCAGAAT
GAACATGCGATGCTCTCACACTGGTAATACGTTCGAAATGTACATCAAGT
TTGAAGGATCTAGAACTTGTAAGTAAAAGGTTGACCACGTTGAGAAAAAC
ACTAACTGCTCTGCAACTGTGAGATACACAAACTGAAATGGGCTTCTCCA
GAAATAgtcccctgttgaggatatcggatatccagagGGTTAAcggtttt
tgttcaaaagtggatatccagggggctaaatatctacaagggggCGGATA
TCCAgtgggtaaagtgtctttttaaGTAAataatacgatatccagggatA
AGTATCTTTATAACATAGAATATCCAGGGAGTTGAGCAtgtttttaagag
tggatatccagggggtctttactaataaagcaggatatccagggggattt
cgatacttcgaaaaatcaatatcctcaacagtggggtaaAGCCCAATACG
ACCTGTGACGACACATTGTGGTTttattcagaaaaaacaaaatgaaccat
gacaaccatccaagatcttggattgagGCTGAGCCAATTAGATTACAACA
TGGAAACTATTCATCATAAAAGGGGGCCAACCCTGGGGTTCCGTGgcatc
ttttttacgacctaaccatttttagtctattccaaagaacagtttattac
aagatatttttgagagggaggacgcggattaggcccgggaaaactttttg
tgatcaaaatagtgacgccataggcaaaactgcaagggaaaaaaGGGTAG
ggaaatagcttattttcaaaagtcaaaacaaacggaactgattggtacca
tctgatagagcatgaaattctgagcaaaaaaattgtattacaacaacaac
aacaactatTACAACAGCCGCTTTAAGatcaactaactgtcagctctgct
gtgattttgacgtcaaatcttgtcttgatcgtactgacgtcggtatgttt
ttgaacttcaagcgactgtatttctttgtgtgttttagtcagagagttgt
tgtaatacatatttttgctcagaaattcatgctctttcagatggtaccaa
tcattttcgtttattttgacttttgaaaatcagcttctttcctacccctt
attttcccttgcagttttgcctacggcgtcactattttggtcataaaaag
ttttcccgggcctaatccgcgtcctccctctcaaaaatatcttgtaatat
actgttctttggaatagactaaaaacgGTTAGGTCGTAAagaagatgtca
cggaaccccaggcttggccccctactatcaACGATATTAAGGAAGAAATA
ATGACGATAATTACACAATTAGGATTTGGGATAAAAAAAcgattcaaatt
ttctttcggcaaaacaacaaattaagaCGCCTCAACTTGAAAATCCTTGC
ATTACCAAACTCACCCACAATAGCAAAAAATTACTAATGTAGTAGCCATA
TTTACTCATTATATTCTATCTATAGATTTTGACACGTCGAAAACAAACAG
TCCTCCAACATATACTCCAAGACCATCACTGAGAAGAACTACAAACTATT
ATTACCCGCCTCCAACAGGGCGTTATCCGACACAAGGGCGAACTACCAAC
TCATGGAATTCTGGCGGACCGTATACATCACGCGGACCGTATACATCACG
CGGGCCGTATACATCACGCGGTCCTTTTACATCACGCGGTCCTTTTACAA
CAAGAAGAATTAATACGTACACTTGGACTAGTTGGGCCCCTGTGACGAAT
TTCCCGCCTCAAACAACTAGCCATCCTGTTGTGAATTCGCAACAACAGAG
TAGCCCTGGCACGGGCATGATTGTAGGATCAACTATTGGTGGTCTGGTGG
CTTTGATCATTTTGGTCGTTCTGATCTATATCTGTTACATGAAAAGGTAA
AGatgaatttcatcaaaatccttAGTTGCTCGATAGCTAAATGATGGAAT
GAACGATAAGCCTCCATaacctgtaacttttgattatGATTATAGAAGGC
AAAGAGAACCACGAAGCAAGCTACAAAATGAAGATTCCATCTATAAAAGG
GTAAGctaaccaaaaataatttttcccgTTGAAATAGATGTCAAAGCAAA
ATGTAAGTAGATTGAACCGAACATGAAGATTTGGCTGCACAAAAGAGGAA
GATAAGGAAGATAAGCAGCTTTCTCCAAGAAATTTGTTCATGGTcataat
atataaaaaagattgTCACTTTTACGGCTTCAACCAATTTACATCTCTAA
CTTATTGCtacattattcgataatattgaatgTCACCGTCAACAAGGAAC
TCTCATACGACTCTTTACTATTCGAATCCCTATTCCATtcaaaaatcgaa
ttagagagcctCAACTGTACTTTTGATTATCATCTAAAAAACCGCAATAC
ATGCTTCAATAGAGTGTGTTTTCAGTCTTATCCTTTTGACTCCACTACCC
TTTTTCTTCTGCCATAGCAACGCCAACAGAATCCGTACATAACAAATGAT
AAAGCTCAAGCACCATGGGATAGGACTGCTTCCAATGCACTCAAAATACC
TGAAGGTAAGAATTCATACCATTTATCATAACTTGGACGTGGCAATGTTA
CTTTTCTACACGCGTATTTAATGACATATGCAAGAACAGTGCCGAAGTGG
TCATCAACTCAAACACGAGTTCTTTGTTCGAATCCCTGTTTCTCTCGTGT
AAGAAAACTAGGGACTGTCAAGAGATCATATTGCGTTCTAAATCCTGATG
GGTTATTCAAATAAAATACCGACTGAATCCTAATTTCTGACAATAACATT
TTTCTTGTAGATCCAAAACGCAAAGAAACCGAAGAAGCAATCATCTTAGC
CATGGAGATCATTCAAGAACGACAATCCAAGAAAATCAAACCAGATGTTG
TTCCTAGTTACATCAAAAACAGACCAGTGCCACAAGTACAAAACACAGAC
CCGAGACCTAAGATCGGCCCCTTATCAAAGTCTGGCGGGTACGAAGAAGA
GAGCCAGGACCTTTATGTGGATCCTGCAACCGGGGCACAAGACGATGCTT
ATTCTTCACTGAGGAAGGATGATTGTCAAGAGAACTTGTACTTGGATCCC
GCTGAAGCCAAAAAGCATGGAGCACAGCCAATAGCTGAAGAGCAATATTT
GGATCTAGATCAAGCAAAGGAAGAATATATGAAGTCAATGATGATCGAAA
CAGATGATACTTGCTAAACCTTTGACGAAGTCATGATAAAAGCATGATCT
AAATTTAGCTTTAATTGGAACAATCATAAGTGCTTTAAGATTTAAGATTT
TGATGGGACATCCTGCATTTGAATATGTGGTATGTGGTAAGATTATCTTT
AgtatttgattgatttgaaactgatttttagAGTTTTAGATGTAGATCTC
AACCGTAAAGATTGAGTTCCATACATTTTCCACAATATAATGATTTATGG
ACCAAGTAGTGACATTTTAACTTTAGATAATTTATCTGTAAATTTTGCCC
TGCAAGATATTCTCTTAATGTACAAAATTATATAA

Coding sequence (CDS) from alignment at sc0000025:179481..184715+

>TCONS_00003091 ID=TCONS_00003091|Name=TCONS_00003091|organism=Clytia hemisphaerica|type=CDS|length=12312bp|location=Sequence derived from alignment at sc0000025:179481..184715+ (Clytia hemisphaerica)
GAAAACCAGTTCCATTCCTCACCGGTCAAAGTTTCACGCCTTCTACCACC
CATGTCTGACGCCTATACAATCAACAATgaacattatttttgtgaaaatg
gaTTCACGTATATGAGGAATGATGCAGTGTCACCTCCTTGTTTGGGAATG
CAATCTCTTATGAGGAAAAGTGAAGACATTGGTAATATCCTCCTGACAGT
TGATAATCCAAAAGATCCAGTTGTTATTTACGAATATGAAAGATCAATGG
GTCACGGTCATCTAAGTCAATGGAGATTGAGATCTAAAGGCCTTGGACTA
ATTTTCAATACTAAAAATGAAAGACCGTTGCTTTGCAAATCACTAGTTGG
TGTATCTTTCGAAACTAATCAGTTGGATGGTTGGTTGCATTCAAATGTTG
TCCCCTTTTCCATCAATTCGACAAGAACAAGAGGAAACTACCTGGAGTTT
TCACAAGATTGGGCAAGTTTTGATACATTCCAAGGACAATTAATCAGAAT
GAACATGCGATGCTCTCACACTGGTAATACGTTCGAAATGTACATCAAGT
TTGAAGGATCTAGAACTTATTTTGACACGTCGAAAACAAACAGTCCTCCA
ACATATACTCCAAGACCATCACTGAGAAGAACTACAAACTATTATTACCC
GCCTCCAACAGGGCGTTATCCGACACAAGGGCGAACTACCAACTCATGGA
ATTCTGGCGGACCGTATACATCACGCGGACCGTATACATCACGCGGGCCG
TATACATCACGCGGTCCTTTTACATCACGCGGTCCTTTTACAACAAGAAG
AATTAATACGTACACTTGGACTAGTTGGGCCCCTGTGACGAATTTCCCGC
CTCAAACAACTAGCCATCCTGTTGTGAATTCGCAACAACAGAGTAGCCCT
GGCACGGGCATGATTGTAGGATCAACTATTGGTGGTCTGGTGGCTTTGAT
CATTTTGGTCGTTCTGATCTATATCTGTTACATGAAAAGAAGGCAAAGAG
AACCACGAAGCAAGCTACAAAATGAAGATTCCATCTATAAAAGGCAACGC
CAACAGAATCCGTACATAACAAATGATAAAGCTCAAGCACCATGGGATAG
GACTGCTTCCAATGCACTCAAAATACCTGAAGATCCAAAACGCAAAGAAA
CCGAAGAAGCAATCATCTTAGCCATGGAGATCATTCAAGAACGACAATCC
AAGAAAATCAAACCAGATGTTGTTCCTAGTTACATCAAAAACAGACCAGT
GCCACAAGTACAAAACACAGACCCGAGACCTAAGATCGGCCCCTTATCAA
AGTCTGGCGGGTACGAAGAAGAGAGCCAGGACCTTTATGTGGATCCTGCA
ACCGGGGCACAAGACGATGCTTATTCTTCACTGAGGAAGGATGATTGTCA
AGAGAACTTGTACTTGGATCCCGCTGAAGCCAAAAAGCATGGAGCACAGC
CAATAGCTGAAGAGCAATATTTGGATCTAGATCAAGCAAAGGAAGAATAT
ATGAAGTCAATGATGATCGAAACAGATGATACTTGCTAAGAAAACCAGTT
CCATTCCTCACCGGTCAAAGTTTCACGCCTTCTACCACCCATGTCTGACG
CCTATACAATCAACAATgaacattatttttgtgaaaatggaTTCACGTAT
ATGAGGAATGATGCAGTGTCACCTCCTTGTTTGGGAATGCAATCTCTTAT
GAGGAAAAGTGAAGACATTGGTAATATCCTCCTGACAGTTGATAATCCAA
AAGATCCAGTTGTTATTTACGAATATGAAAGATCAATGGGTCACGGTCAT
CTAAGTCAATGGAGATTGAGATCTAAAGGCCTTGGACTAATTTTCAATAC
TAAAAATGAAAGACCGTTGCTTTGCAAATCACTAGTTGGTGTATCTTTCG
AAACTAATCAGTTGGATGGTTGGTTGCATTCAAATGTTGTCCCCTTTTCC
ATCAATTCGACAAGAACAAGAGGAAACTACCTGGAGTTTTCACAAGATTG
GGCAAGTTTTGATACATTCCAAGGACAATTAATCAGAATGAACATGCGAT
GCTCTCACACTGGTAATACGTTCGAAATGTACATCAAGTTTGAAGGATCT
AGAACTTATTTTGACACGTCGAAAACAAACAGTCCTCCAACATATACTCC
AAGACCATCACTGAGAAGAACTACAAACTATTATTACCCGCCTCCAACAG
GGCGTTATCCGACACAAGGGCGAACTACCAACTCATGGAATTCTGGCGGA
CCGTATACATCACGCGGACCGTATACATCACGCGGGCCGTATACATCACG
CGGTCCTTTTACATCACGCGGTCCTTTTACAACAAGAAGAATTAATACGT
ACACTTGGACTAGTTGGGCCCCTGTGACGAATTTCCCGCCTCAAACAACT
AGCCATCCTGTTGTGAATTCGCAACAACAGAGTAGCCCTGGCACGGGCAT
GATTGTAGGATCAACTATTGGTGGTCTGGTGGCTTTGATCATTTTGGTCG
TTCTGATCTATATCTGTTACATGAAAAGAAGGCAAAGAGAACCACGAAGC
AAGCTACAAAATGAAGATTCCATCTATAAAAGGCAACGCCAACAGAATCC
GTACATAACAAATGATAAAGCTCAAGCACCATGGGATAGGACTGCTTCCA
ATGCACTCAAAATACCTGAAGATCCAAAACGCAAAGAAACCGAAGAAGCA
ATCATCTTAGCCATGGAGATCATTCAAGAACGACAATCCAAGAAAATCAA
ACCAGATGTTGTTCCTAGTTACATCAAAAACAGACCAGTGCCACAAGTAC
AAAACACAGACCCGAGACCTAAGATCGGCCCCTTATCAAAGTCTGGCGGG
TACGAAGAAGAGAGCCAGGACCTTTATGTGGATCCTGCAACCGGGGCACA
AGACGATGCTTATTCTTCACTGAGGAAGGATGATTGTCAAGAGAACTTGT
ACTTGGATCCCGCTGAAGCCAAAAAGCATGGAGCACAGCCAATAGCTGAA
GAGCAATATTTGGATCTAGATCAAGCAAAGGAAGAATATATGAAGTCAAT
GATGATCGAAACAGATGATACTTGCTAAGAAAACCAGTTCCATTCCTCAC
CGGTCAAAGTTTCACGCCTTCTACCACCCATGTCTGACGCCTATACAATC
AACAATgaacattatttttgtgaaaatggaTTCACGTATATGAGGAATGA
TGCAGTGTCACCTCCTTGTTTGGGAATGCAATCTCTTATGAGGAAAAGTG
AAGACATTGGTAATATCCTCCTGACAGTTGATAATCCAAAAGATCCAGTT
GTTATTTACGAATATGAAAGATCAATGGGTCACGGTCATCTAAGTCAATG
GAGATTGAGATCTAAAGGCCTTGGACTAATTTTCAATACTAAAAATGAAA
GACCGTTGCTTTGCAAATCACTAGTTGGTGTATCTTTCGAAACTAATCAG
TTGGATGGTTGGTTGCATTCAAATGTTGTCCCCTTTTCCATCAATTCGAC
AAGAACAAGAGGAAACTACCTGGAGTTTTCACAAGATTGGGCAAGTTTTG
ATACATTCCAAGGACAATTAATCAGAATGAACATGCGATGCTCTCACACT
GGTAATACGTTCGAAATGTACATCAAGTTTGAAGGATCTAGAACTTATTT
TGACACGTCGAAAACAAACAGTCCTCCAACATATACTCCAAGACCATCAC
TGAGAAGAACTACAAACTATTATTACCCGCCTCCAACAGGGCGTTATCCG
ACACAAGGGCGAACTACCAACTCATGGAATTCTGGCGGACCGTATACATC
ACGCGGACCGTATACATCACGCGGGCCGTATACATCACGCGGTCCTTTTA
CATCACGCGGTCCTTTTACAACAAGAAGAATTAATACGTACACTTGGACT
AGTTGGGCCCCTGTGACGAATTTCCCGCCTCAAACAACTAGCCATCCTGT
TGTGAATTCGCAACAACAGAGTAGCCCTGGCACGGGCATGATTGTAGGAT
CAACTATTGGTGGTCTGGTGGCTTTGATCATTTTGGTCGTTCTGATCTAT
ATCTGTTACATGAAAAGAAGGCAAAGAGAACCACGAAGCAAGCTACAAAA
TGAAGATTCCATCTATAAAAGGCAACGCCAACAGAATCCGTACATAACAA
ATGATAAAGCTCAAGCACCATGGGATAGGACTGCTTCCAATGCACTCAAA
ATACCTGAAGATCCAAAACGCAAAGAAACCGAAGAAGCAATCATCTTAGC
CATGGAGATCATTCAAGAACGACAATCCAAGAAAATCAAACCAGATGTTG
TTCCTAGTTACATCAAAAACAGACCAGTGCCACAAGTACAAAACACAGAC
CCGAGACCTAAGATCGGCCCCTTATCAAAGTCTGGCGGGTACGAAGAAGA
GAGCCAGGACCTTTATGTGGATCCTGCAACCGGGGCACAAGACGATGCTT
ATTCTTCACTGAGGAAGGATGATTGTCAAGAGAACTTGTACTTGGATCCC
GCTGAAGCCAAAAAGCATGGAGCACAGCCAATAGCTGAAGAGCAATATTT
GGATCTAGATCAAGCAAAGGAAGAATATATGAAGTCAATGATGATCGAAA
CAGATGATACTTGCTAAGAAAACCAGTTCCATTCCTCACCGGTCAAAGTT
TCACGCCTTCTACCACCCATGTCTGACGCCTATACAATCAACAATgaaca
ttatttttgtgaaaatggaTTCACGTATATGAGGAATGATGCAGTGTCAC
CTCCTTGTTTGGGAATGCAATCTCTTATGAGGAAAAGTGAAGACATTGGT
AATATCCTCCTGACAGTTGATAATCCAAAAGATCCAGTTGTTATTTACGA
ATATGAAAGATCAATGGGTCACGGTCATCTAAGTCAATGGAGATTGAGAT
CTAAAGGCCTTGGACTAATTTTCAATACTAAAAATGAAAGACCGTTGCTT
TGCAAATCACTAGTTGGTGTATCTTTCGAAACTAATCAGTTGGATGGTTG
GTTGCATTCAAATGTTGTCCCCTTTTCCATCAATTCGACAAGAACAAGAG
GAAACTACCTGGAGTTTTCACAAGATTGGGCAAGTTTTGATACATTCCAA
GGACAATTAATCAGAATGAACATGCGATGCTCTCACACTGGTAATACGTT
CGAAATGTACATCAAGTTTGAAGGATCTAGAACTTATTTTGACACGTCGA
AAACAAACAGTCCTCCAACATATACTCCAAGACCATCACTGAGAAGAACT
ACAAACTATTATTACCCGCCTCCAACAGGGCGTTATCCGACACAAGGGCG
AACTACCAACTCATGGAATTCTGGCGGACCGTATACATCACGCGGACCGT
ATACATCACGCGGGCCGTATACATCACGCGGTCCTTTTACATCACGCGGT
CCTTTTACAACAAGAAGAATTAATACGTACACTTGGACTAGTTGGGCCCC
TGTGACGAATTTCCCGCCTCAAACAACTAGCCATCCTGTTGTGAATTCGC
AACAACAGAGTAGCCCTGGCACGGGCATGATTGTAGGATCAACTATTGGT
GGTCTGGTGGCTTTGATCATTTTGGTCGTTCTGATCTATATCTGTTACAT
GAAAAGAAGGCAAAGAGAACCACGAAGCAAGCTACAAAATGAAGATTCCA
TCTATAAAAGGCAACGCCAACAGAATCCGTACATAACAAATGATAAAGCT
CAAGCACCATGGGATAGGACTGCTTCCAATGCACTCAAAATACCTGAAGA
TCCAAAACGCAAAGAAACCGAAGAAGCAATCATCTTAGCCATGGAGATCA
TTCAAGAACGACAATCCAAGAAAATCAAACCAGATGTTGTTCCTAGTTAC
ATCAAAAACAGACCAGTGCCACAAGTACAAAACACAGACCCGAGACCTAA
GATCGGCCCCTTATCAAAGTCTGGCGGGTACGAAGAAGAGAGCCAGGACC
TTTATGTGGATCCTGCAACCGGGGCACAAGACGATGCTTATTCTTCACTG
AGGAAGGATGATTGTCAAGAGAACTTGTACTTGGATCCCGCTGAAGCCAA
AAAGCATGGAGCACAGCCAATAGCTGAAGAGCAATATTTGGATCTAGATC
AAGCAAAGGAAGAATATATGAAGTCAATGATGATCGAAACAGATGATACT
TGCTAAGAAAACCAGTTCCATTCCTCACCGGTCAAAGTTTCACGCCTTCT
ACCACCCATGTCTGACGCCTATACAATCAACAATgaacattatttttgtg
aaaatggaTTCACGTATATGAGGAATGATGCAGTGTCACCTCCTTGTTTG
GGAATGCAATCTCTTATGAGGAAAAGTGAAGACATTGGTAATATCCTCCT
GACAGTTGATAATCCAAAAGATCCAGTTGTTATTTACGAATATGAAAGAT
CAATGGGTCACGGTCATCTAAGTCAATGGAGATTGAGATCTAAAGGCCTT
GGACTAATTTTCAATACTAAAAATGAAAGACCGTTGCTTTGCAAATCACT
AGTTGGTGTATCTTTCGAAACTAATCAGTTGGATGGTTGGTTGCATTCAA
ATGTTGTCCCCTTTTCCATCAATTCGACAAGAACAAGAGGAAACTACCTG
GAGTTTTCACAAGATTGGGCAAGTTTTGATACATTCCAAGGACAATTAAT
CAGAATGAACATGCGATGCTCTCACACTGGTAATACGTTCGAAATGTACA
TCAAGTTTGAAGGATCTAGAACTTATTTTGACACGTCGAAAACAAACAGT
CCTCCAACATATACTCCAAGACCATCACTGAGAAGAACTACAAACTATTA
TTACCCGCCTCCAACAGGGCGTTATCCGACACAAGGGCGAACTACCAACT
CATGGAATTCTGGCGGACCGTATACATCACGCGGACCGTATACATCACGC
GGGCCGTATACATCACGCGGTCCTTTTACATCACGCGGTCCTTTTACAAC
AAGAAGAATTAATACGTACACTTGGACTAGTTGGGCCCCTGTGACGAATT
TCCCGCCTCAAACAACTAGCCATCCTGTTGTGAATTCGCAACAACAGAGT
AGCCCTGGCACGGGCATGATTGTAGGATCAACTATTGGTGGTCTGGTGGC
TTTGATCATTTTGGTCGTTCTGATCTATATCTGTTACATGAAAAGAAGGC
AAAGAGAACCACGAAGCAAGCTACAAAATGAAGATTCCATCTATAAAAGG
CAACGCCAACAGAATCCGTACATAACAAATGATAAAGCTCAAGCACCATG
GGATAGGACTGCTTCCAATGCACTCAAAATACCTGAAGATCCAAAACGCA
AAGAAACCGAAGAAGCAATCATCTTAGCCATGGAGATCATTCAAGAACGA
CAATCCAAGAAAATCAAACCAGATGTTGTTCCTAGTTACATCAAAAACAG
ACCAGTGCCACAAGTACAAAACACAGACCCGAGACCTAAGATCGGCCCCT
TATCAAAGTCTGGCGGGTACGAAGAAGAGAGCCAGGACCTTTATGTGGAT
CCTGCAACCGGGGCACAAGACGATGCTTATTCTTCACTGAGGAAGGATGA
TTGTCAAGAGAACTTGTACTTGGATCCCGCTGAAGCCAAAAAGCATGGAG
CACAGCCAATAGCTGAAGAGCAATATTTGGATCTAGATCAAGCAAAGGAA
GAATATATGAAGTCAATGATGATCGAAACAGATGATACTTGCTAAGAAAA
CCAGTTCCATTCCTCACCGGTCAAAGTTTCACGCCTTCTACCACCCATGT
CTGACGCCTATACAATCAACAATgaacattatttttgtgaaaatggaTTC
ACGTATATGAGGAATGATGCAGTGTCACCTCCTTGTTTGGGAATGCAATC
TCTTATGAGGAAAAGTGAAGACATTGGTAATATCCTCCTGACAGTTGATA
ATCCAAAAGATCCAGTTGTTATTTACGAATATGAAAGATCAATGGGTCAC
GGTCATCTAAGTCAATGGAGATTGAGATCTAAAGGCCTTGGACTAATTTT
CAATACTAAAAATGAAAGACCGTTGCTTTGCAAATCACTAGTTGGTGTAT
CTTTCGAAACTAATCAGTTGGATGGTTGGTTGCATTCAAATGTTGTCCCC
TTTTCCATCAATTCGACAAGAACAAGAGGAAACTACCTGGAGTTTTCACA
AGATTGGGCAAGTTTTGATACATTCCAAGGACAATTAATCAGAATGAACA
TGCGATGCTCTCACACTGGTAATACGTTCGAAATGTACATCAAGTTTGAA
GGATCTAGAACTTATTTTGACACGTCGAAAACAAACAGTCCTCCAACATA
TACTCCAAGACCATCACTGAGAAGAACTACAAACTATTATTACCCGCCTC
CAACAGGGCGTTATCCGACACAAGGGCGAACTACCAACTCATGGAATTCT
GGCGGACCGTATACATCACGCGGACCGTATACATCACGCGGGCCGTATAC
ATCACGCGGTCCTTTTACATCACGCGGTCCTTTTACAACAAGAAGAATTA
ATACGTACACTTGGACTAGTTGGGCCCCTGTGACGAATTTCCCGCCTCAA
ACAACTAGCCATCCTGTTGTGAATTCGCAACAACAGAGTAGCCCTGGCAC
GGGCATGATTGTAGGATCAACTATTGGTGGTCTGGTGGCTTTGATCATTT
TGGTCGTTCTGATCTATATCTGTTACATGAAAAGAAGGCAAAGAGAACCA
CGAAGCAAGCTACAAAATGAAGATTCCATCTATAAAAGGCAACGCCAACA
GAATCCGTACATAACAAATGATAAAGCTCAAGCACCATGGGATAGGACTG
CTTCCAATGCACTCAAAATACCTGAAGATCCAAAACGCAAAGAAACCGAA
GAAGCAATCATCTTAGCCATGGAGATCATTCAAGAACGACAATCCAAGAA
AATCAAACCAGATGTTGTTCCTAGTTACATCAAAAACAGACCAGTGCCAC
AAGTACAAAACACAGACCCGAGACCTAAGATCGGCCCCTTATCAAAGTCT
GGCGGGTACGAAGAAGAGAGCCAGGACCTTTATGTGGATCCTGCAACCGG
GGCACAAGACGATGCTTATTCTTCACTGAGGAAGGATGATTGTCAAGAGA
ACTTGTACTTGGATCCCGCTGAAGCCAAAAAGCATGGAGCACAGCCAATA
GCTGAAGAGCAATATTTGGATCTAGATCAAGCAAAGGAAGAATATATGAA
GTCAATGATGATCGAAACAGATGATACTTGCTAAGAAAACCAGTTCCATT
CCTCACCGGTCAAAGTTTCACGCCTTCTACCACCCATGTCTGACGCCTAT
ACAATCAACAATgaacattatttttgtgaaaatggaTTCACGTATATGAG
GAATGATGCAGTGTCACCTCCTTGTTTGGGAATGCAATCTCTTATGAGGA
AAAGTGAAGACATTGGTAATATCCTCCTGACAGTTGATAATCCAAAAGAT
CCAGTTGTTATTTACGAATATGAAAGATCAATGGGTCACGGTCATCTAAG
TCAATGGAGATTGAGATCTAAAGGCCTTGGACTAATTTTCAATACTAAAA
ATGAAAGACCGTTGCTTTGCAAATCACTAGTTGGTGTATCTTTCGAAACT
AATCAGTTGGATGGTTGGTTGCATTCAAATGTTGTCCCCTTTTCCATCAA
TTCGACAAGAACAAGAGGAAACTACCTGGAGTTTTCACAAGATTGGGCAA
GTTTTGATACATTCCAAGGACAATTAATCAGAATGAACATGCGATGCTCT
CACACTGGTAATACGTTCGAAATGTACATCAAGTTTGAAGGATCTAGAAC
TTATTTTGACACGTCGAAAACAAACAGTCCTCCAACATATACTCCAAGAC
CATCACTGAGAAGAACTACAAACTATTATTACCCGCCTCCAACAGGGCGT
TATCCGACACAAGGGCGAACTACCAACTCATGGAATTCTGGCGGACCGTA
TACATCACGCGGACCGTATACATCACGCGGGCCGTATACATCACGCGGTC
CTTTTACATCACGCGGTCCTTTTACAACAAGAAGAATTAATACGTACACT
TGGACTAGTTGGGCCCCTGTGACGAATTTCCCGCCTCAAACAACTAGCCA
TCCTGTTGTGAATTCGCAACAACAGAGTAGCCCTGGCACGGGCATGATTG
TAGGATCAACTATTGGTGGTCTGGTGGCTTTGATCATTTTGGTCGTTCTG
ATCTATATCTGTTACATGAAAAGAAGGCAAAGAGAACCACGAAGCAAGCT
ACAAAATGAAGATTCCATCTATAAAAGGCAACGCCAACAGAATCCGTACA
TAACAAATGATAAAGCTCAAGCACCATGGGATAGGACTGCTTCCAATGCA
CTCAAAATACCTGAAGATCCAAAACGCAAAGAAACCGAAGAAGCAATCAT
CTTAGCCATGGAGATCATTCAAGAACGACAATCCAAGAAAATCAAACCAG
ATGTTGTTCCTAGTTACATCAAAAACAGACCAGTGCCACAAGTACAAAAC
ACAGACCCGAGACCTAAGATCGGCCCCTTATCAAAGTCTGGCGGGTACGA
AGAAGAGAGCCAGGACCTTTATGTGGATCCTGCAACCGGGGCACAAGACG
ATGCTTATTCTTCACTGAGGAAGGATGATTGTCAAGAGAACTTGTACTTG
GATCCCGCTGAAGCCAAAAAGCATGGAGCACAGCCAATAGCTGAAGAGCA
ATATTTGGATCTAGATCAAGCAAAGGAAGAATATATGAAGTCAATGATGA
TCGAAACAGATGATACTTGCTAAGAAAACCAGTTCCATTCCTCACCGGTC
AAAGTTTCACGCCTTCTACCACCCATGTCTGACGCCTATACAATCAACAA
TgaacattatttttgtgaaaatggaTTCACGTATATGAGGAATGATGCAG
TGTCACCTCCTTGTTTGGGAATGCAATCTCTTATGAGGAAAAGTGAAGAC
ATTGGTAATATCCTCCTGACAGTTGATAATCCAAAAGATCCAGTTGTTAT
TTACGAATATGAAAGATCAATGGGTCACGGTCATCTAAGTCAATGGAGAT
TGAGATCTAAAGGCCTTGGACTAATTTTCAATACTAAAAATGAAAGACCG
TTGCTTTGCAAATCACTAGTTGGTGTATCTTTCGAAACTAATCAGTTGGA
TGGTTGGTTGCATTCAAATGTTGTCCCCTTTTCCATCAATTCGACAAGAA
CAAGAGGAAACTACCTGGAGTTTTCACAAGATTGGGCAAGTTTTGATACA
TTCCAAGGACAATTAATCAGAATGAACATGCGATGCTCTCACACTGGTAA
TACGTTCGAAATGTACATCAAGTTTGAAGGATCTAGAACTTATTTTGACA
CGTCGAAAACAAACAGTCCTCCAACATATACTCCAAGACCATCACTGAGA
AGAACTACAAACTATTATTACCCGCCTCCAACAGGGCGTTATCCGACACA
AGGGCGAACTACCAACTCATGGAATTCTGGCGGACCGTATACATCACGCG
GACCGTATACATCACGCGGGCCGTATACATCACGCGGTCCTTTTACATCA
CGCGGTCCTTTTACAACAAGAAGAATTAATACGTACACTTGGACTAGTTG
GGCCCCTGTGACGAATTTCCCGCCTCAAACAACTAGCCATCCTGTTGTGA
ATTCGCAACAACAGAGTAGCCCTGGCACGGGCATGATTGTAGGATCAACT
ATTGGTGGTCTGGTGGCTTTGATCATTTTGGTCGTTCTGATCTATATCTG
TTACATGAAAAGAAGGCAAAGAGAACCACGAAGCAAGCTACAAAATGAAG
ATTCCATCTATAAAAGGCAACGCCAACAGAATCCGTACATAACAAATGAT
AAAGCTCAAGCACCATGGGATAGGACTGCTTCCAATGCACTCAAAATACC
TGAAGATCCAAAACGCAAAGAAACCGAAGAAGCAATCATCTTAGCCATGG
AGATCATTCAAGAACGACAATCCAAGAAAATCAAACCAGATGTTGTTCCT
AGTTACATCAAAAACAGACCAGTGCCACAAGTACAAAACACAGACCCGAG
ACCTAAGATCGGCCCCTTATCAAAGTCTGGCGGGTACGAAGAAGAGAGCC
AGGACCTTTATGTGGATCCTGCAACCGGGGCACAAGACGATGCTTATTCT
TCACTGAGGAAGGATGATTGTCAAGAGAACTTGTACTTGGATCCCGCTGA
AGCCAAAAAGCATGGAGCACAGCCAATAGCTGAAGAGCAATATTTGGATC
TAGATCAAGCAAAGGAAGAATATATGAAGTCAATGATGATCGAAACAGAT
GATACTTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001714XLOC_001714Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003091-exon-sc0000025-1491911889:179481..179489TCONS_00003091-exon-sc0000025-1491911889:179481..179489Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:179481..179489TCONS_00003091-exon-sc0000025-1510915933:179481..179489Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:179481..179489TCONS_00003091-exon-sc0000025-1575043694:179481..179489Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:179631..179802TCONS_00003091-exon-sc0000025-1491911889:179631..179802Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:179631..179802TCONS_00003091-exon-sc0000025-1510915933:179631..179802Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:179631..179802TCONS_00003091-exon-sc0000025-1575043694:179631..179802Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:180356..180621TCONS_00003091-exon-sc0000025-1491911889:180356..180621Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:180356..180621TCONS_00003091-exon-sc0000025-1510915933:180356..180621Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:180356..180621TCONS_00003091-exon-sc0000025-1575043694:180356..180621Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:181128..181248TCONS_00003091-exon-sc0000025-1491911889:181128..181248Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:181128..181248TCONS_00003091-exon-sc0000025-1510915933:181128..181248Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:181128..181248TCONS_00003091-exon-sc0000025-1575043694:181128..181248Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:182656..183076TCONS_00003091-exon-sc0000025-1491911889:182656..183076Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:182656..183076TCONS_00003091-exon-sc0000025-1510915933:182656..183076Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:182656..183076TCONS_00003091-exon-sc0000025-1575043694:182656..183076Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:183176..183230TCONS_00003091-exon-sc0000025-1491911889:183176..183230Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:183176..183230TCONS_00003091-exon-sc0000025-1510915933:183176..183230Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:183176..183230TCONS_00003091-exon-sc0000025-1575043694:183176..183230Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:183648..183735TCONS_00003091-exon-sc0000025-1491911889:183648..183735Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:183648..183735TCONS_00003091-exon-sc0000025-1510915933:183648..183735Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:183648..183735TCONS_00003091-exon-sc0000025-1575043694:183648..183735Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1491911889:183991..184715TCONS_00003091-exon-sc0000025-1491911889:183991..184715Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1510915933:183991..184715TCONS_00003091-exon-sc0000025-1510915933:183991..184715Clytia hemisphaericaexon
TCONS_00003091-exon-sc0000025-1575043694:183991..184715TCONS_00003091-exon-sc0000025-1575043694:183991..184715Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003091-proteinTCONS_00003091-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:179481..184715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.107639	0.0629789	0.0243748	0.0476939	0.0290314	0.022941	0.0553547	0.0777335	0.0544231	0.0674118	0	0	1.5606	1.27872	0.0366725	0.0787105	0.113126	0.165643	3.77594	3.1131	0.936642	0.852807	0.394933	0.471255	1.2019	1.609	0.0590377	0	0	0.0243443
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003091 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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