TCONS_00003061 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003061
Unique NameTCONS_00003061
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003061 ID=TCONS_00003061|Name=TCONS_00003061|organism=Clytia hemisphaerica|type=transcript|length=3179bp
GTTATGGGTCAGCAGTGGAAAGACAAATTCTTTGACAACTTTTCAGAAAC
TGATCTAGAGGaagtcaaaatcgaaaaaacttcCACACAGTACAGATTTG
GAGGAGAAAAGCCAGTTCCTGCGACTGAAAGAGTTACTTTTCCTTGTTAC
ATTCTAGGGGAGAAAACCAAACTTACTGCTGATGTCGTTCCAAGAGATGT
GCCCTTTTTAATGTCGAAAGGGGAAATGAAAACTAGAgggtttaaaatcg
attttgacACTGACAGTTTAACTATAAAGGATAAGAGTCATGAACTTGAG
ACTACTTACAATGGACATTTCAAGCTCCCTCTTTGGAATTATGAAGAAGT
TAACCTCTCTGTCGATGAAATGACAGAGAATGAGAAGAAAGCTATGATCA
CTAAACTTCATCGCCAGTTTCGACATCAACCTGCTCATGTTACTGAAGGT
TTGTTACGTCGAGCTGAAATTCTTACTCCGGAACTAAAGAGAATGAATAT
TGAGGTGGCAGTGAATTGTGATATTTGTAAACTTTATAAACGTTCTCCAC
CTAGACCTGTTGTTGCTTTACCAATAGCATCAAAGTTTAATGATGTCATT
GCCATGGATTTGAAAGTGTTTTCATTGACAAAAGGCATTTATTTCATTCA
TTACATTGATCTCTTTACGAGATTTTCAAAAGCAAGTGTTATCAAGTCAA
AGGAGCCAAAAGTTGTTGTTGACTCCTTTATCAGTACGTGGATTGCATCC
GGGATGGGTGCACCTAACAAAGTGTTAGTCGACAATGGGGGTGAATTCGA
TAACCCCGAACTGTTAGAAGCAATGGAACAGTTTAACATCGAAGTTTGTG
CGACAGCCGCTTACTCACCTTGGAGTAACGGTACATGTGAGCGAAATCAT
GCCGTTGTTGACCTTATGGTGAACAAAATGCTAGAAGAATCACCAGGACT
CAAGCTAGACATTGTATTGGCTCACGCAGTCAATGCGAAGAACAGTCTTC
AAAATCACAACGGTTTTGCACCTATTCAACTTGTGACAGGTGCATTGCCA
AACTTACCGAACGTGCTCAACAACAAATTACCAGCTTTGGAAACAACAAC
ATCACCTGAATTGGAGAATCATCTATCAGCCATGCACTCTGCTAGACGAG
CGTTCATGAAAGCAGAGTCGTCAGAAAAGATCAGGAGAGCAATTCGACAT
CCTGTTCGATCATGTGAGCAAATGTTTCAGAATGGAGATAAAGTATTCTA
CAAACGAGATGATAGCCCAAGATGGAAAGGACCTGGTAAAGTACTAGGTC
ATCTGGGCTCTATTGTATATGTTATTCATGGTTCACGCCTTGTTAGATGT
GCTTCGTGTCGTTTTATTAAGGTATCAGCAACCAACGAAAACGTGAAAGA
ATCAGATGAGCAAAATATCAAGGGAGAACGACAACCGAAAGTCAACGAAA
ACGACCCAGAGAATCCGATTCAACCCTCCAACGTTAACGAACAAACGAAA
AACGTTGAGGAGAATCAATCTGAAGTGAACAAACCAACTCGTCCTAAACG
TCAAACGAAAGCACCACCGAAGTTCGTCCCAGAGGAAGGTGTTTGGCAGG
ATGAAGAAGCGAATGTTGTCTTTATACCGAAAGAGCGGCACAACGAACCA
GCAGTTGTCAAAGCAAAGCAAGATGAAGTTGACAATTGGAAGCGACTTGA
AGCTGTTGATGTTGTTGACGATAGAAATCAACGAGTTATCAGTACAAGAT
GGGTGATTACTGAAAAAACCTACCCAGACGGTTCAATTAAACCTAAAGCG
AGACTTGTGGTCCGTGGGTTTGAAGAAGAGGGGGAAACCCAAGTAGACGC
CCCTACTGCGGCAAAAATGACATTACGAACAGTGTTAGCCATTTCAGCAA
ACAGAAAATGGTCAGTTAAGACTATTGACATCAAAGCCGCTTTTCTTCAA
GGGCGTGCCATCGAAAGAGATATCTATCTTATACCTCCGGATGAATCCAA
TCTACAAGGAAAACTTTGGAGACTTAGAAAATCTGCATACGGTTTAGCAG
ATGCCGCCAGAAATTGGTATTTATCAGTGAGAGACACACTTATTAAACTG
AATTGTAAACAATCCAATCTCGACAAAGCTGTTTTTAGATGGTACCACAA
CGAAACGCTTGAAGGAATTCTTGTTCTTCACGTGGATGATTTTATGGTGA
CAGGTACTGAGAGATTTCAAACAGTTATGAAAGCTCTCAATGAGAAATTT
CAAGTTGGAAGTCGTCAAGAAGGAAAGTTTAAGTACGTTGGCTTGAACAT
TGAAACCCAGAATGATGGGATTGAAATAAGCCAAGATCAATATGCCAGCG
AAATTCCGGAAGTCAATGTCGAGGATAAGGATAGACCAAATGATGACAAG
CTGAAGCCTCATGAACTAAGAGATTTAAGAGGCATTATTGGTCAAGTCCA
ATGGGTTGCATCTCAAACTAgaccagatctgtctttcgatTCGTTAGAAC
TAAGTGTTGAGCGAAATAAAGCGACACTTTCTACATTGAAACGCGCAAAG
AAAGTTGTGAAGAAGTTAAAGTCGTCTTCATCGACCGTCAAGATGAAAGA
CATCGGGCAGAGTCCAAAGCTAAGTGTTTACCCTGATGCAGGTTTTTGCA
ACCTTCCGGATGGTGTCTCGAGCACACAAGGATTCGTTATCCTACTTGAA
GGAAGCGTCAACTCCACTGTTATCGATTGGGGTGCTAGAAAAATCAAACG
AAAAGTCTCTAGTACCCTTGAAGCTGAAGCCTTATCGTTGAAAGAAACCA
TTAATAACGCTATTTACATCGGTTGTTTGTTATCGGAGTTTCTGTTCAAT
GACTTCACCAACAATCGAATTCCAATCCAAGTCTTCACCGACAACAAGCC
GTTGGAGCAGAGTATCCGATCCACGAAACAAGTCCAGGAGCGGAGATTGC
GTGTCGACATCGGAGAAGTCCAACGACTGGTCGAGGAGAAGGAGATTAAG
GATATCAACTGGGTTCCTTCCGACGATATGCTTGGCGATGGGTTGACCAA
ACGAGatagaattaaaagttatgaaaatttacgaaaagtATTAATTTGAA
ATGGCTATTGATGGTATCATATGATATAACGAAAGTGTATTAAAATGGCT
ATTGAAAGTTATTTCTGGTTTTATGATTA
Run BLAST on NCBI

protein sequence of TCONS_00003061-protein

>TCONS_00003061-protein ID=TCONS_00003061-protein|Name=TCONS_00003061-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1032bp
VMGQQWKDKFFDNFSETDLEEVKIEKTSTQYRFGGEKPVPATERVTFPCY
ILGEKTKLTADVVPRDVPFLMSKGEMKTRGFKIDFDTDSLTIKDKSHELE
TTYNGHFKLPLWNYEEVNLSVDEMTENEKKAMITKLHRQFRHQPAHVTEG
LLRRAEILTPELKRMNIEVAVNCDICKLYKRSPPRPVVALPIASKFNDVI
AMDLKVFSLTKGIYFIHYIDLFTRFSKASVIKSKEPKVVVDSFISTWIAS
GMGAPNKVLVDNGGEFDNPELLEAMEQFNIEVCATAAYSPWSNGTCERNH
AVVDLMVNKMLEESPGLKLDIVLAHAVNAKNSLQNHNGFAPIQLVTGALP
NLPNVLNNKLPALETTTSPELENHLSAMHSARRAFMKAESSEKIRRAIRH
PVRSCEQMFQNGDKVFYKRDDSPRWKGPGKVLGHLGSIVYVIHGSRLVRC
ASCRFIKVSATNENVKESDEQNIKGERQPKVNENDPENPIQPSNVNEQTK
NVEENQSEVNKPTRPKRQTKAPPKFVPEEGVWQDEEANVVFIPKERHNEP
AVVKAKQDEVDNWKRLEAVDVVDDRNQRVISTRWVITEKTYPDGSIKPKA
RLVVRGFEEEGETQVDAPTAAKMTLRTVLAISANRKWSVKTIDIKAAFLQ
GRAIERDIYLIPPDESNLQGKLWRLRKSAYGLADAARNWYLSVRDTLIKL
NCKQSNLDKAVFRWYHNETLEGILVLHVDDFMVTGTERFQTVMKALNEKF
QVGSRQEGKFKYVGLNIETQNDGIEISQDQYASEIPEVNVEDKDRPNDDK
LKPHELRDLRGIIGQVQWVASQTRPDLSFDSLELSVERNKATLSTLKRAK
KVVKKLKSSSSTVKMKDIGQSPKLSVYPDAGFCNLPDGVSSTQGFVILLE
GSVNSTVIDWGARKIKRKVSSTLEAEALSLKETINNAIYIGCLLSEFLFN
DFTNNRIPIQVFTDNKPLEQSIRSTKQVQERRLRVDIGEVQRLVEEKEIK
DINWVPSDDMLGDGLTKRDRIKSYENLRKVLI
Run BLAST on NCBI

transcript from alignment at sc0000024:892946..896124

Legend: exonthree_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003061 ID=TCONS_00003061|Name=TCONS_00003061|organism=Clytia hemisphaerica|type=transcript|length=3179bp|location=Sequence derived from alignment at sc0000024:892946..896124 (Clytia hemisphaerica)
TAATCATAAAACCAGAAATAACTTTCAATAGCCATTTTAATACACTTTCG TTATATCATATGATACCATCAATAGCCATTTCAAATTAATacttttcgta aattttcataacttttaattctatCTCGTTTGGTCAACCCATCGCCAAGC ATATCGTCGGAAGGAACCCAGTTGATATCCTTAATCTCCTTCTCCTCGAC CAGTCGTTGGACTTCTCCGATGTCGACACGCAATCTCCGCTCCTGGACTT GTTTCGTGGATCGGATACTCTGCTCCAACGGCTTGTTGTCGGTGAAGACT TGGATTGGAATTCGATTGTTGGTGAAGTCATTGAACAGAAACTCCGATAA CAAACAACCGATGTAAATAGCGTTATTAATGGTTTCTTTCAACGATAAGG CTTCAGCTTCAAGGGTACTAGAGACTTTTCGTTTGATTTTTCTAGCACCC CAATCGATAACAGTGGAGTTGACGCTTCCTTCAAGTAGGATAACGAATCC TTGTGTGCTCGAGACACCATCCGGAAGGTTGCAAAAACCTGCATCAGGGT AAACACTTAGCTTTGGACTCTGCCCGATGTCTTTCATCTTGACGGTCGAT GAAGACGACTTTAACTTCTTCACAACTTTCTTTGCGCGTTTCAATGTAGA AAGTGTCGCTTTATTTCGCTCAACACTTAGTTCTAACGAatcgaaagaca gatctggtcTAGTTTGAGATGCAACCCATTGGACTTGACCAATAATGCCT CTTAAATCTCTTAGTTCATGAGGCTTCAGCTTGTCATCATTTGGTCTATC CTTATCCTCGACATTGACTTCCGGAATTTCGCTGGCATATTGATCTTGGC TTATTTCAATCCCATCATTCTGGGTTTCAATGTTCAAGCCAACGTACTTA AACTTTCCTTCTTGACGACTTCCAACTTGAAATTTCTCATTGAGAGCTTT CATAACTGTTTGAAATCTCTCAGTACCTGTCACCATAAAATCATCCACGT GAAGAACAAGAATTCCTTCAAGCGTTTCGTTGTGGTACCATCTAAAAACA GCTTTGTCGAGATTGGATTGTTTACAATTCAGTTTAATAAGTGTGTCTCT CACTGATAAATACCAATTTCTGGCGGCATCTGCTAAACCGTATGCAGATT TTCTAAGTCTCCAAAGTTTTCCTTGTAGATTGGATTCATCCGGAGGTATA AGATAGATATCTCTTTCGATGGCACGCCCTTGAAGAAAAGCGGCTTTGAT GTCAATAGTCTTAACTGACCATTTTCTGTTTGCTGAAATGGCTAACACTG TTCGTAATGTCATTTTTGCCGCAGTAGGGGCGTCTACTTGGGTTTCCCCC TCTTCTTCAAACCCACGGACCACAAGTCTCGCTTTAGGTTTAATTGAACC GTCTGGGTAGGTTTTTTCAGTAATCACCCATCTTGTACTGATAACTCGTT GATTTCTATCGTCAACAACATCAACAGCTTCAAGTCGCTTCCAATTGTCA ACTTCATCTTGCTTTGCTTTGACAACTGCTGGTTCGTTGTGCCGCTCTTT CGGTATAAAGACAACATTCGCTTCTTCATCCTGCCAAACACCTTCCTCTG GGACGAACTTCGGTGGTGCTTTCGTTTGACGTTTAGGACGAGTTGGTTTG TTCACTTCAGATTGATTCTCCTCAACGTTTTTCGTTTGTTCGTTAACGTT GGAGGGTTGAATCGGATTCTCTGGGTCGTTTTCGTTGACTTTCGGTTGTC GTTCTCCCTTGATATTTTGCTCATCTGATTCTTTCACGTTTTCGTTGGTT GCTGATACCTTAATAAAACGACACGAAGCACATCTAACAAGGCGTGAACC ATGAATAACATATACAATAGAGCCCAGATGACCTAGTACTTTACCAGGTC CTTTCCATCTTGGGCTATCATCTCGTTTGTAGAATACTTTATCTCCATTC TGAAACATTTGCTCACATGATCGAACAGGATGTCGAATTGCTCTCCTGAT CTTTTCTGACGACTCTGCTTTCATGAACGCTCGTCTAGCAGAGTGCATGG CTGATAGATGATTCTCCAATTCAGGTGATGTTGTTGTTTCCAAAGCTGGT AATTTGTTGTTGAGCACGTTCGGTAAGTTTGGCAATGCACCTGTCACAAG TTGAATAGGTGCAAAACCGTTGTGATTTTGAAGACTGTTCTTCGCATTGA CTGCGTGAGCCAATACAATGTCTAGCTTGAGTCCTGGTGATTCTTCTAGC ATTTTGTTCACCATAAGGTCAACAACGGCATGATTTCGCTCACATGTACC GTTACTCCAAGGTGAGTAAGCGGCTGTCGCACAAACTTCGATGTTAAACT GTTCCATTGCTTCTAACAGTTCGGGGTTATCGAATTCACCCCCATTGTCG ACTAACACTTTGTTAGGTGCACCCATCCCGGATGCAATCCACGTACTGAT AAAGGAGTCAACAACAACTTTTGGCTCCTTTGACTTGATAACACTTGCTT TTGAAAATCTCGTAAAGAGATCAATGTAATGAATGAAATAAATGCCTTTT GTCAATGAAAACACTTTCAAATCCATGGCAATGACATCATTAAACTTTGA TGCTATTGGTAAAGCAACAACAGGTCTAGGTGGAGAACGTTTATAAAGTT TACAAATATCACAATTCACTGCCACCTCAATATTCATTCTCTTTAGTTCC GGAGTAAGAATTTCAGCTCGACGTAACAAACCTTCAGTAACATGAGCAGG TTGATGTCGAAACTGGCGATGAAGTTTAGTGATCATAGCTTTCTTCTCAT TCTCTGTCATTTCATCGACAGAGAGGTTAACTTCTTCATAATTCCAAAGA GGGAGCTTGAAATGTCCATTGTAAGTAGTCTCAAGTTCATGACTCTTATC CTTTATAGTTAAACTGTCAGTgtcaaaatcgattttaaacccTCTAGTTT TCATTTCCCCTTTCGACATTAAAAAGGGCACATCTCTTGGAACGACATCA GCAGTAAGTTTGGTTTTCTCCCCTAGAATGTAACAAGGAAAAGTAACTCT TTCAGTCGCAGGAACTGGCTTTTCTCCTCCAAATCTGTACTGTGTGgaag ttttttcgattttgacttCCTCTAGATCAGTTTCTGAAAAGTTGTCAAAG AATTTGTCTTTCCACTGCTGACCCATAAC

Coding sequence (CDS) from alignment at sc0000024:892946..896124

>TCONS_00003061 ID=TCONS_00003061|Name=TCONS_00003061|organism=Clytia hemisphaerica|type=CDS|length=3099bp|location=Sequence derived from alignment at sc0000024:892946..896124 (Clytia hemisphaerica)
TCAAATTAATacttttcgtaaattttcataacttttaattctatCTCGTT
TGGTCAACCCATCGCCAAGCATATCGTCGGAAGGAACCCAGTTGATATCC
TTAATCTCCTTCTCCTCGACCAGTCGTTGGACTTCTCCGATGTCGACACG
CAATCTCCGCTCCTGGACTTGTTTCGTGGATCGGATACTCTGCTCCAACG
GCTTGTTGTCGGTGAAGACTTGGATTGGAATTCGATTGTTGGTGAAGTCA
TTGAACAGAAACTCCGATAACAAACAACCGATGTAAATAGCGTTATTAAT
GGTTTCTTTCAACGATAAGGCTTCAGCTTCAAGGGTACTAGAGACTTTTC
GTTTGATTTTTCTAGCACCCCAATCGATAACAGTGGAGTTGACGCTTCCT
TCAAGTAGGATAACGAATCCTTGTGTGCTCGAGACACCATCCGGAAGGTT
GCAAAAACCTGCATCAGGGTAAACACTTAGCTTTGGACTCTGCCCGATGT
CTTTCATCTTGACGGTCGATGAAGACGACTTTAACTTCTTCACAACTTTC
TTTGCGCGTTTCAATGTAGAAAGTGTCGCTTTATTTCGCTCAACACTTAG
TTCTAACGAatcgaaagacagatctggtcTAGTTTGAGATGCAACCCATT
GGACTTGACCAATAATGCCTCTTAAATCTCTTAGTTCATGAGGCTTCAGC
TTGTCATCATTTGGTCTATCCTTATCCTCGACATTGACTTCCGGAATTTC
GCTGGCATATTGATCTTGGCTTATTTCAATCCCATCATTCTGGGTTTCAA
TGTTCAAGCCAACGTACTTAAACTTTCCTTCTTGACGACTTCCAACTTGA
AATTTCTCATTGAGAGCTTTCATAACTGTTTGAAATCTCTCAGTACCTGT
CACCATAAAATCATCCACGTGAAGAACAAGAATTCCTTCAAGCGTTTCGT
TGTGGTACCATCTAAAAACAGCTTTGTCGAGATTGGATTGTTTACAATTC
AGTTTAATAAGTGTGTCTCTCACTGATAAATACCAATTTCTGGCGGCATC
TGCTAAACCGTATGCAGATTTTCTAAGTCTCCAAAGTTTTCCTTGTAGAT
TGGATTCATCCGGAGGTATAAGATAGATATCTCTTTCGATGGCACGCCCT
TGAAGAAAAGCGGCTTTGATGTCAATAGTCTTAACTGACCATTTTCTGTT
TGCTGAAATGGCTAACACTGTTCGTAATGTCATTTTTGCCGCAGTAGGGG
CGTCTACTTGGGTTTCCCCCTCTTCTTCAAACCCACGGACCACAAGTCTC
GCTTTAGGTTTAATTGAACCGTCTGGGTAGGTTTTTTCAGTAATCACCCA
TCTTGTACTGATAACTCGTTGATTTCTATCGTCAACAACATCAACAGCTT
CAAGTCGCTTCCAATTGTCAACTTCATCTTGCTTTGCTTTGACAACTGCT
GGTTCGTTGTGCCGCTCTTTCGGTATAAAGACAACATTCGCTTCTTCATC
CTGCCAAACACCTTCCTCTGGGACGAACTTCGGTGGTGCTTTCGTTTGAC
GTTTAGGACGAGTTGGTTTGTTCACTTCAGATTGATTCTCCTCAACGTTT
TTCGTTTGTTCGTTAACGTTGGAGGGTTGAATCGGATTCTCTGGGTCGTT
TTCGTTGACTTTCGGTTGTCGTTCTCCCTTGATATTTTGCTCATCTGATT
CTTTCACGTTTTCGTTGGTTGCTGATACCTTAATAAAACGACACGAAGCA
CATCTAACAAGGCGTGAACCATGAATAACATATACAATAGAGCCCAGATG
ACCTAGTACTTTACCAGGTCCTTTCCATCTTGGGCTATCATCTCGTTTGT
AGAATACTTTATCTCCATTCTGAAACATTTGCTCACATGATCGAACAGGA
TGTCGAATTGCTCTCCTGATCTTTTCTGACGACTCTGCTTTCATGAACGC
TCGTCTAGCAGAGTGCATGGCTGATAGATGATTCTCCAATTCAGGTGATG
TTGTTGTTTCCAAAGCTGGTAATTTGTTGTTGAGCACGTTCGGTAAGTTT
GGCAATGCACCTGTCACAAGTTGAATAGGTGCAAAACCGTTGTGATTTTG
AAGACTGTTCTTCGCATTGACTGCGTGAGCCAATACAATGTCTAGCTTGA
GTCCTGGTGATTCTTCTAGCATTTTGTTCACCATAAGGTCAACAACGGCA
TGATTTCGCTCACATGTACCGTTACTCCAAGGTGAGTAAGCGGCTGTCGC
ACAAACTTCGATGTTAAACTGTTCCATTGCTTCTAACAGTTCGGGGTTAT
CGAATTCACCCCCATTGTCGACTAACACTTTGTTAGGTGCACCCATCCCG
GATGCAATCCACGTACTGATAAAGGAGTCAACAACAACTTTTGGCTCCTT
TGACTTGATAACACTTGCTTTTGAAAATCTCGTAAAGAGATCAATGTAAT
GAATGAAATAAATGCCTTTTGTCAATGAAAACACTTTCAAATCCATGGCA
ATGACATCATTAAACTTTGATGCTATTGGTAAAGCAACAACAGGTCTAGG
TGGAGAACGTTTATAAAGTTTACAAATATCACAATTCACTGCCACCTCAA
TATTCATTCTCTTTAGTTCCGGAGTAAGAATTTCAGCTCGACGTAACAAA
CCTTCAGTAACATGAGCAGGTTGATGTCGAAACTGGCGATGAAGTTTAGT
GATCATAGCTTTCTTCTCATTCTCTGTCATTTCATCGACAGAGAGGTTAA
CTTCTTCATAATTCCAAAGAGGGAGCTTGAAATGTCCATTGTAAGTAGTC
TCAAGTTCATGACTCTTATCCTTTATAGTTAAACTGTCAGTgtcaaaatc
gattttaaacccTCTAGTTTTCATTTCCCCTTTCGACATTAAAAAGGGCA
CATCTCTTGGAACGACATCAGCAGTAAGTTTGGTTTTCTCCCCTAGAATG
TAACAAGGAAAAGTAACTCTTTCAGTCGCAGGAACTGGCTTTTCTCCTCC
AAATCTGTACTGTGTGgaagttttttcgattttgacttCCTCTAGATCAG
TTTCTGAAAAGTTGTCAAAGAATTTGTCTTTCCACTGCTGACCCATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001692XLOC_001692Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003061-exon-sc0000024-1491911889:892946..896124TCONS_00003061-exon-sc0000024-1491911889:892946..896124Clytia hemisphaericaexon
TCONS_00003061-exon-sc0000024-1510915933:892946..896124TCONS_00003061-exon-sc0000024-1510915933:892946..896124Clytia hemisphaericaexon
TCONS_00003061-exon-sc0000024-1575043694:892946..896124TCONS_00003061-exon-sc0000024-1575043694:892946..896124Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003061-proteinTCONS_00003061-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:892946..896124 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0238907 0 0 0 0.137715 0.185083 0.134798 0.232284 0.0134473 0.115197 0 0 0.112267 0.145886 0.00678297 0.0509542 0.0179347 0.0275737 0 0 0 0 0.0136963 0 0.18464 0.172136 0.0163795 0 0.0132584 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR013103RVT_2
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003061 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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