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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003021 ID=TCONS_00003021|Name=TCONS_00003021|organism=Clytia hemisphaerica|type=transcript|length=325bp
ACTCGTTAGCAACGGTCATGACACATACGCTATCATGAGTTTCTATGGCG
ACTACGTGCCAGCATATATAGGATATACATCAAAACAATGCAACTTGGAT
ACGTTTTTTGGGAGAGGAGACAAAAACTATTTGGAAAATACAAATACGGG
AAAAGAAGGagaattcattttcaaagtCAATGATAAAGCATGTATTAAaa
aagTGATGTTACCGTACGGTGGAACGGAAGGGGATTACGTCATAACGGAA
GCAGATGATCTTAATTTTCATATCCGTTTACGTAAATCAATGCCATTGTT
TACAAAAATGGGACGCAACCTTTAC Run BLAST on NCBI protein sequence of TCONS_00003021-protein >TCONS_00003021-protein ID=TCONS_00003021-protein|Name=TCONS_00003021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=108bp
LVSNGHDTYAIMSFYGDYVPAYIGYTSKQCNLDTFFGRGDKNYLENTNTG
KEGEFIFKVNDKACIKKVMLPYGGTEGDYVITEADDLNFHIRLRKSMPLF
TKMGRNLY Run BLAST on NCBI transcript from alignment at sc0000024:832639..835051- Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003021 ID=TCONS_00003021|Name=TCONS_00003021|organism=Clytia hemisphaerica|type=transcript|length=2413bp|location=Sequence derived from alignment at sc0000024:832639..835051- (Clytia hemisphaerica)
ACTCGTTAGCAACGGTCATGACACATACGCTATCATGAGTTTCTATGGCG
ACTACGTGCCAGCATATATAGGATATACATCAAAACAATGCAACTTGGAT
ACGTTTTTTGGGAGAGGAGACAAAAACTATTTGGAAAATACAAATACGGG
AAAAGAAGGAGAATTCATTTTCAAAGTCAATGATAAAGCATGTATTAAAA
AAGGTAGAGCATCCGGCTCACAGATTTATAAAGCCCAAAGGGCTAGATGT
CGTGCTTTAAGCCATCACAGGCAGAAAAAGTGAATAGCCGCAAGAAATAT
ACTTGCTATTATTTTCAAAAATCCACGAAGCTTGATTGGTCAAGCAATGA
AATTCTATTGTAATATCACGTGACCTNGCTGCTACTGTTTTCAAAAATCC
GCGAACCTTTTGATTGGTCATGCACTGCAATTCTGTTTTAATATCACTTG
ACCTAGGTAGGATTTCCTACCTAGATACGACACACTTTTCAGCCAAAACA
CGACATTTAGTCCTTCTGGCTACGTTATCTGATATTTCAATGGCGGATTT
GCGGCCGTCCACGCTTAGACGAAGCTATCGTCCGTTAGAAGGGTCAGTAA
ACGTGGGAAAATTTATATGCGCATAGCCAGGGCGCAAATCCATCCCGCCT
CTAAAACTATTCCCTTTTTAGCCATCTTGTGTAGCCGATAGGATCGTCTA
GTCCACGCTATAACGTTCTAAAGGAGCGGATCAATTCCGAGCCAATCAGG
TGAGATAGTAGGCCTTTGATGTGCCGCATTCCTAGTCGGGTTCAATTACC
CTTCTGCGTATACCTGAATATATTTCAGTTTTACCATGAACATATAAACG
ACTGGACATCTATCTTTTATTGTCTCTTTGAAGCGAGCTTCGTTGCCGCC
TGTATTTCAAAATTGGTATAAAAAATCCGACAATATTCCGTCATAATTTT
ATTTCTTTGAATTATTTAGGTAAAAGGATTGATCGAGCTTGAACATTACT
CCTAATGTGCAAAAAAATTATTTTCGAATTTCTTCACAAGTTCGCAATAT
ATTTTATCAACATTTTCAACTCTAAAATGCAGAATTTCAACTGCGTGTAT
ACTTTTGAATCCTTTTTGTCACTCAAATAATTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCATTTTATGCTTTTAACGAGGCGGCAACGAAGCTAGCAGCCTT
TTCTACAAAAAGACAAAGGAGATGGATGTCCAGTCGTTTATATGTTCATG
GTTTTACCCATTAATTCTCGAAAACGAAGACTGGGGTCCAGCCCTTCTGC
TGCAAAATCATTTAGGCAGTATGGCGAAATTCCGTAATCTAAACTTTCCC
AACCTTCCTAGCCTTTTTTTGGAACACCCGGTATAAAATAGTAAGATTAA
AAAAATATATATATGCTCTGCCACCCAAATCTCCTGAAAGAAGATAGTTG
GACAGAAATTCTTTGAATTTCTTCACATATATATACAAAGGAATGAGGGA
AAGTAGTCTGAATCGCACACCTCTATAGATATAATTCCTATATAGAAGAA
ACTTTTTTTCGCTAGAGGATGAGCAGAAGCCTAGAGGAAAAGCGAGCGTA
TTTGACAATGGATTTCCCGAACATTCAACCTTTCTTCATTTACAAGCCAG
ACCTTTTACAGATATTTTTAGACTTTTCTCTCATCTTTTAGTGATGTTAC
CGTACGGTGGAACGGAAGGGGATTACGTCATAACGGAAGCAGATGATCTT
AATTTTCATATCCGTTTACGTAAATCAATGCCATTGTTTACAAAAATGGG
ACGCAACCTTTAC Coding sequence (CDS) from alignment at sc0000024:832639..835051- >TCONS_00003021 ID=TCONS_00003021|Name=TCONS_00003021|organism=Clytia hemisphaerica|type=CDS|length=648bp|location=Sequence derived from alignment at sc0000024:832639..835051- (Clytia hemisphaerica)
TGATGTTACCGTACGGTGGAACGGAAGGGGATTACGTCATAACGGAAGCA
GATGATCTTAATTTTCATATCCGTTTACGTAAATCAATGCCATTGTTTAC
AAAAATGGGACGCAACCTTTACCTCGTTAGCAACGGTCATGACACATACG
CTATCATGAGTTTCTATGGCGACTACGTGCCAGCATATATAGGATATACA
TCAAAACAATGCAACTTGGATACGTTTTTTGGGAGAGGAGACAAAAACTA
TTTGGAAAATACAAATACGGGAAAAGAAGGAGAATTCATTTTCAAAGTCA
ATGATAAAGCATGTATTAAAAAAGTGATGTTACCGTACGGTGGAACGGAA
GGGGATTACGTCATAACGGAAGCAGATGATCTTAATTTTCATATCCGTTT
ACGTAAATCAATGCCATTGTTTACAAAAATGGGACGCAACCTTTACCTCG
TTAGCAACGGTCATGACACATACGCTATCATGAGTTTCTATGGCGACTAC
GTGCCAGCATATATAGGATATACATCAAAACAATGCAACTTGGATACGTT
TTTTGGGAGAGGAGACAAAAACTATTTGGAAAATACAAATACGGGAAAAG
AAGGAGAATTCATTTTCAAAGTCAATGATAAAGCATGTATTAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003021-exon-sc0000024-1575043694:834849..835051 | TCONS_00003021-exon-sc0000024-1575043694:834849..835051 | Clytia hemisphaerica | exon |
| TCONS_00003021-exon-sc0000024-1575043694:832639..832760 | TCONS_00003021-exon-sc0000024-1575043694:832639..832760 | Clytia hemisphaerica | exon |
| TCONS_00003021-exon-sc0000024-1510915933:834849..835051 | TCONS_00003021-exon-sc0000024-1510915933:834849..835051 | Clytia hemisphaerica | exon |
| TCONS_00003021-exon-sc0000024-1510915933:832639..832760 | TCONS_00003021-exon-sc0000024-1510915933:832639..832760 | Clytia hemisphaerica | exon |
| TCONS_00003021-exon-sc0000024-1491911889:834849..835051 | TCONS_00003021-exon-sc0000024-1491911889:834849..835051 | Clytia hemisphaerica | exon |
| TCONS_00003021-exon-sc0000024-1491911889:832639..832760 | TCONS_00003021-exon-sc0000024-1491911889:832639..832760 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000024 | supercontig | sc0000024:832639..835051 - |
Blast
The following BLAST results are available for this feature:
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