TCONS_00002972 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002972
Unique NameTCONS_00002972
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length707

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002972 ID=TCONS_00002972|Name=TCONS_00002972|organism=Clytia hemisphaerica|type=transcript|length=707bp
CAGTATGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAG
ATTTCTCTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGA
AAAAGAATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCT
TGGTTTGTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAA
AATACAATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTC
CTACAGCTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTT
GTGATGAAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTA
ACGAAAAGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGA
CGAGTTGTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATG
ATGGTTATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGC
GCCCCTTCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTG
ATGTATATATTATGAACGTTAAACAGATGTCAAACAAACGCCAGCGCCAA
TGACATGGGGTCAAGCGCAGACCCTTCCTCTTTGGACGATCAGAAAAAAA
AGGGATGCCAAAACGTTGGAATTTTAGGACCTCGTCCGACTTCATactta
atacacg
Run BLAST on NCBI

protein sequence of TCONS_00002972-protein

>TCONS_00002972-protein ID=TCONS_00002972-protein|Name=TCONS_00002972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
VCTTQQLPTKHVTSPKISLPTAVPHEKSFVKEEKELLIVISLLVILIVFL
VCAMITCFCYRKKSAQNTIPAEDAGLIHCANSSYSSVEEDFSHIRVPNFC
DEDELFGNGAPSKNKVTKSNFQPVHYKRHVDEDELFLGNPHFQATEKDND
GYETRVSSNRTRPTTRAPSENEDRSSYSGSIS
Run BLAST on NCBI

transcript from alignment at sc0000024:791810..798798+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002972 ID=TCONS_00002972|Name=TCONS_00002972|organism=Clytia hemisphaerica|type=transcript|length=6989bp|location=Sequence derived from alignment at sc0000024:791810..798798+ (Clytia hemisphaerica)
CAGTATGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAG ATTTCTCTTCCAACTGCAGTGCCGCACGAAAAGGTCCTTTTTCTTCCTTA CTTTATCCATGGATATATAAAAGCGCGTAATTTTATATATCTATGCTTTA TCCTTACATCATCAAGTTTAATGTTGTATTCCAGTGGTCTTGTTGATCCT TTATTGGTAAATTATTACTATGGATTACGTGGGTTTAAGGGCCCATGGTT AAAATATCAAATCATTTCGGACATAAATCTATTCGGCAAAAACATTGTGG CATgagcaatatattttttaattaaccaACAACGagcaattattttattt tttgacgatATATTTCGATCTATTGATCATCTTCAGgtctaaaattcaat aaaaacaagattataaaaatctNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNttgtttttattgaattttagacCTGAAGATGATCAATAGATCG AAATATatcgtcaaaaaataaaataattgctCGTTGTTggttaattgaaa aatataaatctATTCCCCACAATTTTTAAAGATACTTTGTTTTTCATCCA TTCCACCCCCACTCCACTCGCATCGCACCACCATGTCAAATTTGTTGGTC TCAACATGCACAAATAGTGAATAATCAGGCATCACACCTCAATTCTTTTG CCCTGTCACGCATTGCTGAAAAATCTTTGGAATTACGAAAAAGTCCTAGT CGTCACGCTAACAGCTGGGAGGGATTGATAGTCTCTTTGGAATCACTCAC TCACTTCCGTAGCTCTAGTTTGGACAGCCGACTTTCTACCCTGCCTATAC TCAATGTTAGAATTGGTAAAATGTTGGCAGTTGAAATCTTcgcttgaaaa agattgaaataagACATCGCATTGACGTCAAACGGGAGCAATGTATTGAC TTTATACGgccaactttctgcccacttaaattcacaattagaataggccg GGGTAGCAAGTAAGTCGTTTAAACAAGAGCTCAAACAAGATCaatttatt aaattttcttttcaataccaGTCCTTCGTAAAGGAAGAAAAAGAATTGCT GATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGTTTGTGCAA TGATCACTTGCTTTTGTTATCGTAAGAAAAGGTATCTGTTTTATTTACGG TTTAGGCACTTGCAAGAATTGGGTCttgcaaatgtcaaatttctcGATTA AACTTGATCAGACACAGGATATTTCGAAATCCATCCCCCGGGGGATGCAG CCAGGCAATTttaccgacgggtatgtgcggcggttaagggtatgttatTC AAGATACCAAAAATACAAAGTAAgagtggacttttgataaatggaCTGAC TGTAAAGGTGAAAATTATAGGAAATCCAAGAAAAATTCTGATTTCTACTC GAAGAGttgaaaatttgttgaaaattttaaaaagattcacTGCAAGGGTA CAAATATCACCGATTTTTTGCTGCTCTGTAAGTGTGCgattttaaaaata cattttttcgcTGCACACATACTGTCAGTTGGTTAACCCACTGCCCCCGG ATCCATCCCTCAATTCGATCTTGGAAAGAGATAGGTTGCTAGCATCAACT ATTGGATTAATGCATCTTTTACTACCTACAGCTTTGTAAGGGTCTTAATA GGATTCTCATCTTCCAGCTCCTAGAAATCGATCCATCATCTGTTAATTAG Caataccatgaacatataaacgactggacatctatcttttattgtctctt tgaagcgagcttcgttgccgcctgtatttcaaaattggtatgaaaaatcc gacaatattccgtcataattttatttctttgaattatttaggcaaaaaga ttgatagagcttgaacattattcctaatgtataaaaaaattattttcgaa tttttttacaagtttgtaatatattttctcgacattttcaactctgaaat gcagaatttcaactgcgtgaatacttttgaatcccttttgtcactccaat aattttttttacgacttgaaaaaaataacttgccaaagtttagagcctgt gtaataagaatatcgaaattagaatgtggcactctctaaaattattagac acttttaagtcaaaatttagaaatattagtcggagttttgacaagctgac gatgattttgcctccgttatctttgttatgatatataTAAAAGACTtcag aagagtagaacaacagagacttttgtcaaagttttgacgttgttagtaag gtattcccaagtggtatatcatcaaaatctattgtttcactTTATGCTTt caacgaggcggcaacgaagctagctgtgttatcttcaaaaagacaaagga gatggatgtccagtcgtttatatgttcatggcaATACCAAAATGTCCTGA ATTCAAACTAAGACTATCCATGTAAAATTATTATTCATCCTTTCTTTTTA GTGCTCAAAATACAATACCGGCTGAGGTTAGTTTTCTCACCCCATTTCGA ATTAAAAAGAGAACTCTttcaacccgggggggggggggtNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG GGGAGTGCCGTTAGTCAGGGTAACCTTTTTAGGGCTCTTAAAAGATCCCA aaattactaattttcaagacagagtcgacttttggttattttgagctatt tttccaatttttcatctacttttagtcatttttgcctcgatttttaattt tgccCCCTTTCAGGGTCAAAATGGGAGAAATTTTCGATTCATCGTTCTGA TAAgatcccaaatttaccaaaaattcatatttaacagggtccacttttca aactccactGACATGTCCCGTCGGCCATTAAGGTCAGTGACCCTCCCCCC TGGGGTGTTTATGTTATGACCATCTCAGTTTTTGATATGAACGtttatta aacaaaaaaacagtggttaccacccctgtttcacagaccCAGTAGAATCC TGACTCCATTGGAAAATTTAGTCGAAATTTGTTCCCcgttgggaaaaata ccctacaatttccccactgggaaattggtAATAGAAAATTTCGCACTCAA AAACAAACCCCATTATTCAATCAGAATTATAatatgttggacggtgaaaa agaatgcggctaatatattttgattttttagaattataatattgaggtta agtaaatcggcaaaaatcacgacgacggtcGAAAATGTAACAGTCTAGTg agttttaaccaatcaaatttcgtattttcactagcctattacatttttcg tagtttttcgtccgtcgtcgtgattatcccaGCATACTTAACCTCAGTAA TAgatatatattataatataatttttatcccTATATCCCCATAAGAATTT CGATGGATTATTTCATCCccgtaaaaaaaaattcgccATACTGTAATACA gcccagctagcacacaacgttgtttcaacgttcatctaacgttatatgaa cgttgtgaacgttagataaacgttgaaacaacgttgtgtgccagttggga gAGGTTTACTTTAACTCTGAAAGAAAGCCTTCCTCGTAACCATAGCACTT CTTAGAATGCCAAAATTTTGTCACTGTTCAAAGACTTTTTCTCTTTATTA GGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTACAGCTCTGTTGAAG AAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGATGAAGATGAATTA TTCGGAAATGGCGCCCCGTCTAAAAACAAAGGTTGGGGACTTCATCTCTA TCCTTGATATCTGTACTCAGTACCGTACTTATTTACCGTATAGTTTTTTA AATCATGTCTCTGGTTCACACTCTGATCTAACCAATTCTTCCCTGCATTT GCAAGCCCACCTGATAAACCGACGTGAGCTCTGTCACTAATCAGAATTTT TAAGTActcatttacaaaaaaattaaaatcaataacTTGTCAATAAAAAG GGTCggaaactaactttttttgcagTATTCTACTCTCGATTGGAAAATAA ACGTCATTTTGAAGTaagggaaaaaattattttcagagACGAGGCTCACC TTAGTGTATTATTGCAGATGGATTTCCCCAACTAGCTTTGTATATAAGCG TACGATCTCAATCTCCCGCCTTGTGGGCGTTATCCGAATTAATCAATACT CAATTCTTTTAGTAACGAAAAGCAACTTTCAGCCGGTTCATTACAAGAGA CACGTTGACGAGGACGAGTTGTTCTTGGGGAATCCCCATTTTCAAGCAAC GGAAAAAGGTAACCATAATAACAATGATTGAGAGATACCGGGTATGGCAA GAAAACCGtgctaaaattcaaaactaagcaccaaattttcagaatcatta cataccttatcggggaaaacttcgtcggggaaaaatattcgtcacttgct ggttttggtaaacgcattaaggccggggagaatttttgtcggggaaaaat attcgtcacttggccgaaatttcgtcacttttccccggcgaagttttccc tgataaggtatACATATGcctttctacaaaaaattgCAACAGGAATCcat ttgtaatttttgatgtCAGCAGTTTAGAACTTCCTTAGCTAGAATCAATA TTGCTTACACTAATCAGTGTAGATGATGAAAGTCCAAGGTGTTTATTTAT TCTTCCACATTTTAGTGTAGATTTTCCTTAGGCATGTTGCCTTGCTAAGT TCTGGCTTTCGAGATGGTGGGGATAGTTTTTCTAATAGTCTGGCATATTC CGACACTATTCCGACATTACCTCACTGCAATCAATTGTTATATCAATGTT ATATCAATGTTATATCAATGTTATATCAATGTTATATCAATGTTATATGG GAGTTATTTTGCCGTTTTACACTAGCTGTAAAATCTTTTCTTCATTTAGA CAATGATGGTTATGAGACCAGAGTATCTTCGAATCGAACGCGACCTGTAA GTTATTCAATGTACTTGACATgtataaaaaatgttatttttcaaataaat tttgctCAAGGAACATCAGAAGCAATAAACTCACACCCAATCATATAGTT TTCTTTTTTACGATTCTGATGTCTGATATCTTCAGTTAGGGAAGGTCCTA CCACGTCCAGTAGTGCAAATGAATAACTCTAAGGTACAAGATTGAACTTG AAATACTGCGCCGTTTTAATGGGATAAGAGTTTAATTTAAGACTTGACTT TGGTTAATTATATCTAATAACCATATAATAGATAAATATTTGAATACTAA ATTTTTATTCCTTCACACTTTAGACAACACGCGCCCCTTCAGAAAACGAA GACCGTAGCAGTTACTCTGGATCCATATCTTGATGTATATATTATGAACG TTAAACAGATGTCAAACAAACGCCAGCGCCAATGACATGGGGTCAAGCGC AGACCCTTCCTCTTTGGACGATCAGAAAAAAAAGGGATGCCAAAACGTTG GAATTTTAGGACCTCGTCCGACTTCATacttaatacacg

Coding sequence (CDS) from alignment at sc0000024:791810..798798+

>TCONS_00002972 ID=TCONS_00002972|Name=TCONS_00002972|organism=Clytia hemisphaerica|type=CDS|length=3843bp|location=Sequence derived from alignment at sc0000024:791810..798798+ (Clytia hemisphaerica)
GTATGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGAT
TTCTCTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAA
AAGAATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTG
GTTTGTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAA
TACAATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCT
ACAGCTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGT
GATGAAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAAC
GAAAAGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACG
AGTTGTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGAT
GGTTATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGC
CCCTTCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAG
TATGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATT
TCTCTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAA
AGAATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGG
TTTGTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAAT
ACAATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTA
CAGCTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTG
ATGAAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACG
AAAAGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGA
GTTGTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATG
GTTATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCC
CCTTCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAGT
ATGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATTT
CTCTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAAA
GAATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGT
TTGTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAATA
CAATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTAC
AGCTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGA
TGAAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACGA
AAAGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGAG
TTGTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATGG
TTATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCCC
CTTCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAGTA
TGTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATTTC
TCTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAAAG
AATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGTT
TGTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAATAC
AATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTACA
GCTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGAT
GAAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACGAA
AAGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGAGT
TGTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATGGT
TATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCCCC
TTCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAGTAT
GTACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATTTCT
CTTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAAAGA
ATTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGTTT
GTGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAATACA
ATACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTACAG
CTCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGATG
AAGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACGAAA
AGCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGAGTT
GTTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATGGTT
ATGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCCCCT
TCAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAGTATG
TACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATTTCTC
TTCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAAAGAA
TTGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGTTTG
TGCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAATACAA
TACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTACAGC
TCTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGATGA
AGATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACGAAAA
GCAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGAGTTG
TTCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATGGTTA
TGAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCCCCTT
CAGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGAGTATGT
ACTACACAGCAATTGCCAACAAAACATGTTACATCACCAAAGATTTCTCT
TCCAACTGCAGTGCCGCACGAAAAGTCCTTCGTAAAGGAAGAAAAAGAAT
TGCTGATCGTAATTTCCCTGTTGGTGATTTTGATCGTTTTCTTGGTTTGT
GCAATGATCACTTGCTTTTGTTATCGTAAGAAAAGTGCTCAAAATACAAT
ACCGGCTGAGGACGCAGGTTTGATTCATTGTGCAAACTCCTCCTACAGCT
CTGTTGAAGAAGATTTTAGTCACATCCGCGTCCCAAACTTTTGTGATGAA
GATGAATTATTCGGAAATGGCGCCCCGTCTAAAAACAAAGTAACGAAAAG
CAACTTTCAGCCGGTTCATTACAAGAGACACGTTGACGAGGACGAGTTGT
TCTTGGGGAATCCCCATTTTCAAGCAACGGAAAAAGACAATGATGGTTAT
GAGACCAGAGTATCTTCGAATCGAACGCGACCTACAACACGCGCCCCTTC
AGAAAACGAAGACCGTAGCAGTTACTCTGGATCCATATCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001633XLOC_001633Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002972-proteinTCONS_00002972-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002972-exon-sc0000024-1491911889:791810..791892TCONS_00002972-exon-sc0000024-1491911889:791810..791892Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:791810..791892TCONS_00002972-exon-sc0000024-1510915933:791810..791892Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:791810..791892TCONS_00002972-exon-sc0000024-1575043694:791810..791892Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:794181..794290TCONS_00002972-exon-sc0000024-1491911889:794181..794290Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:794181..794290TCONS_00002972-exon-sc0000024-1510915933:794181..794290Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:794181..794290TCONS_00002972-exon-sc0000024-1575043694:794181..794290Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:795611..795635TCONS_00002972-exon-sc0000024-1491911889:795611..795635Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:795611..795635TCONS_00002972-exon-sc0000024-1510915933:795611..795635Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:795611..795635TCONS_00002972-exon-sc0000024-1575043694:795611..795635Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:796911..797040TCONS_00002972-exon-sc0000024-1491911889:796911..797040Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:796911..797040TCONS_00002972-exon-sc0000024-1510915933:796911..797040Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:796911..797040TCONS_00002972-exon-sc0000024-1575043694:796911..797040Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:797472..797567TCONS_00002972-exon-sc0000024-1491911889:797472..797567Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:797472..797567TCONS_00002972-exon-sc0000024-1510915933:797472..797567Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:797472..797567TCONS_00002972-exon-sc0000024-1575043694:797472..797567Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:798209..798255TCONS_00002972-exon-sc0000024-1491911889:798209..798255Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:798209..798255TCONS_00002972-exon-sc0000024-1510915933:798209..798255Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:798209..798255TCONS_00002972-exon-sc0000024-1575043694:798209..798255Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1491911889:798583..798798TCONS_00002972-exon-sc0000024-1491911889:798583..798798Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1510915933:798583..798798TCONS_00002972-exon-sc0000024-1510915933:798583..798798Clytia hemisphaericaexon
TCONS_00002972-exon-sc0000024-1575043694:798583..798798TCONS_00002972-exon-sc0000024-1575043694:798583..798798Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:791810..798798 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.541 12.3658 12.2606 11.6795 1.15286 0.607337 4.30477 5.05903 10.0255 9.14634 17.3223 12.3833 16.0617 20.5182 20.4286 16.8004 4.49231 5.70078 35.7446 33.9966 1.44647 1.81423 7.26978 4.75274 0.688389 0.819161 0.488424 0.521259 4.90242 5.23648
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002972 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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